@pga-ai/core 0.4.0 → 0.8.0

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Files changed (183) hide show
  1. package/README.md +7 -7
  2. package/dist/PGA.d.ts +100 -1
  3. package/dist/PGA.d.ts.map +1 -1
  4. package/dist/PGA.js +1015 -25
  5. package/dist/PGA.js.map +1 -1
  6. package/dist/advanced-ai/AgentVitals.d.ts +23 -0
  7. package/dist/advanced-ai/AgentVitals.d.ts.map +1 -0
  8. package/dist/advanced-ai/AgentVitals.js +13 -0
  9. package/dist/advanced-ai/AgentVitals.js.map +1 -0
  10. package/dist/advanced-ai/CalibratedAutonomy.d.ts +37 -0
  11. package/dist/advanced-ai/CalibratedAutonomy.d.ts.map +1 -0
  12. package/dist/advanced-ai/CalibratedAutonomy.js +151 -0
  13. package/dist/advanced-ai/CalibratedAutonomy.js.map +1 -0
  14. package/dist/advanced-ai/EmotionalModel.d.ts +27 -0
  15. package/dist/advanced-ai/EmotionalModel.d.ts.map +1 -0
  16. package/dist/advanced-ai/EmotionalModel.js +206 -0
  17. package/dist/advanced-ai/EmotionalModel.js.map +1 -0
  18. package/dist/advanced-ai/EnhancedSelfModel.d.ts +53 -0
  19. package/dist/advanced-ai/EnhancedSelfModel.d.ts.map +1 -0
  20. package/dist/advanced-ai/EnhancedSelfModel.js +189 -0
  21. package/dist/advanced-ai/EnhancedSelfModel.js.map +1 -0
  22. package/dist/advanced-ai/SelfModel.d.ts +29 -0
  23. package/dist/advanced-ai/SelfModel.d.ts.map +1 -0
  24. package/dist/advanced-ai/SelfModel.js +91 -0
  25. package/dist/advanced-ai/SelfModel.js.map +1 -0
  26. package/dist/advanced-ai/StrategicAutonomy.d.ts +41 -0
  27. package/dist/advanced-ai/StrategicAutonomy.d.ts.map +1 -0
  28. package/dist/advanced-ai/StrategicAutonomy.js +148 -0
  29. package/dist/advanced-ai/StrategicAutonomy.js.map +1 -0
  30. package/dist/core/GenesisBootstrap.d.ts +18 -0
  31. package/dist/core/GenesisBootstrap.d.ts.map +1 -0
  32. package/dist/core/GenesisBootstrap.js +95 -0
  33. package/dist/core/GenesisBootstrap.js.map +1 -0
  34. package/dist/core/GenomeManager.js +1 -1
  35. package/dist/core/PromptAssembler.d.ts +26 -0
  36. package/dist/core/PromptAssembler.d.ts.map +1 -1
  37. package/dist/core/PromptAssembler.js +133 -8
  38. package/dist/core/PromptAssembler.js.map +1 -1
  39. package/dist/evaluation/BenchmarkSuites.d.ts +2 -0
  40. package/dist/evaluation/BenchmarkSuites.d.ts.map +1 -1
  41. package/dist/evaluation/BenchmarkSuites.js +9 -6
  42. package/dist/evaluation/BenchmarkSuites.js.map +1 -1
  43. package/dist/evaluation/Evaluator.d.ts.map +1 -1
  44. package/dist/evaluation/Evaluator.js +8 -7
  45. package/dist/evaluation/Evaluator.js.map +1 -1
  46. package/dist/evaluation/ProofOfValueRunner.d.ts +41 -0
  47. package/dist/evaluation/ProofOfValueRunner.d.ts.map +1 -0
  48. package/dist/evaluation/ProofOfValueRunner.js +177 -0
  49. package/dist/evaluation/ProofOfValueRunner.js.map +1 -0
  50. package/dist/evaluation/SandboxSuites.js +4 -4
  51. package/dist/evaluation/SandboxSuites.js.map +1 -1
  52. package/dist/evaluation/fixtures/proof-of-value-v1.json +178 -0
  53. package/dist/evolution/MutationOperator.d.ts +26 -0
  54. package/dist/evolution/MutationOperator.d.ts.map +1 -1
  55. package/dist/evolution/MutationOperator.js +200 -9
  56. package/dist/evolution/MutationOperator.js.map +1 -1
  57. package/dist/evolution/PurposeSurvival.d.ts +68 -0
  58. package/dist/evolution/PurposeSurvival.d.ts.map +1 -0
  59. package/dist/evolution/PurposeSurvival.js +199 -0
  60. package/dist/evolution/PurposeSurvival.js.map +1 -0
  61. package/dist/evolution/boost/EvolutionBoostEngine.d.ts +2 -1
  62. package/dist/evolution/boost/EvolutionBoostEngine.d.ts.map +1 -1
  63. package/dist/evolution/boost/EvolutionBoostEngine.js +3 -3
  64. package/dist/evolution/boost/EvolutionBoostEngine.js.map +1 -1
  65. package/dist/evolution/boost/GeneticRecombinator.d.ts.map +1 -1
  66. package/dist/evolution/boost/GeneticRecombinator.js +16 -5
  67. package/dist/evolution/boost/GeneticRecombinator.js.map +1 -1
  68. package/dist/evolution/boost/ParetoOptimizer.d.ts +1 -1
  69. package/dist/evolution/boost/ParetoOptimizer.d.ts.map +1 -1
  70. package/dist/evolution/boost/ParetoOptimizer.js.map +1 -1
  71. package/dist/evolution/boost/operators/BreakthroughOperator.d.ts +4 -7
  72. package/dist/evolution/boost/operators/BreakthroughOperator.d.ts.map +1 -1
  73. package/dist/evolution/boost/operators/BreakthroughOperator.js +172 -160
  74. package/dist/evolution/boost/operators/BreakthroughOperator.js.map +1 -1
  75. package/dist/evolution/boost/operators/CrossoverMutationOperator.d.ts +10 -15
  76. package/dist/evolution/boost/operators/CrossoverMutationOperator.d.ts.map +1 -1
  77. package/dist/evolution/boost/operators/CrossoverMutationOperator.js +167 -120
  78. package/dist/evolution/boost/operators/CrossoverMutationOperator.js.map +1 -1
  79. package/dist/evolution/boost/operators/PatternExtractionOperator.d.ts +7 -10
  80. package/dist/evolution/boost/operators/PatternExtractionOperator.d.ts.map +1 -1
  81. package/dist/evolution/boost/operators/PatternExtractionOperator.js +167 -164
  82. package/dist/evolution/boost/operators/PatternExtractionOperator.js.map +1 -1
  83. package/dist/evolution/boost/operators/SemanticRestructuringOperator.d.ts +2 -3
  84. package/dist/evolution/boost/operators/SemanticRestructuringOperator.d.ts.map +1 -1
  85. package/dist/evolution/boost/operators/SemanticRestructuringOperator.js +136 -54
  86. package/dist/evolution/boost/operators/SemanticRestructuringOperator.js.map +1 -1
  87. package/dist/evolution/boost/utils/llmHelper.d.ts +10 -0
  88. package/dist/evolution/boost/utils/llmHelper.d.ts.map +1 -0
  89. package/dist/evolution/boost/utils/llmHelper.js +13 -0
  90. package/dist/evolution/boost/utils/llmHelper.js.map +1 -0
  91. package/dist/firewall/ContentFirewall.d.ts +30 -0
  92. package/dist/firewall/ContentFirewall.d.ts.map +1 -0
  93. package/dist/firewall/ContentFirewall.js +251 -0
  94. package/dist/firewall/ContentFirewall.js.map +1 -0
  95. package/dist/firewall/DefaultPatterns.d.ts +8 -0
  96. package/dist/firewall/DefaultPatterns.d.ts.map +1 -0
  97. package/dist/firewall/DefaultPatterns.js +623 -0
  98. package/dist/firewall/DefaultPatterns.js.map +1 -0
  99. package/dist/firewall/index.d.ts +3 -0
  100. package/dist/firewall/index.d.ts.map +1 -0
  101. package/dist/firewall/index.js +3 -0
  102. package/dist/firewall/index.js.map +1 -0
  103. package/dist/gene-bank/CognitiveGene.d.ts +106 -106
  104. package/dist/gene-bank/GeneAdopter.d.ts +1 -0
  105. package/dist/gene-bank/GeneAdopter.d.ts.map +1 -1
  106. package/dist/gene-bank/GeneAdopter.js +23 -4
  107. package/dist/gene-bank/GeneAdopter.js.map +1 -1
  108. package/dist/gene-bank/GeneBank.d.ts +6 -6
  109. package/dist/gene-bank/GeneExtractor.d.ts +4 -4
  110. package/dist/gene-bank/MarketplaceClient.d.ts +26 -0
  111. package/dist/gene-bank/MarketplaceClient.d.ts.map +1 -0
  112. package/dist/gene-bank/MarketplaceClient.js +147 -0
  113. package/dist/gene-bank/MarketplaceClient.js.map +1 -0
  114. package/dist/gene-bank/SandboxTester.d.ts +2 -2
  115. package/dist/gene-bank/adapters/PostgresGeneStorage.js +1 -1
  116. package/dist/gene-bank/adapters/PostgresGeneStorage.js.map +1 -1
  117. package/dist/gene-bank/index.d.ts +1 -0
  118. package/dist/gene-bank/index.d.ts.map +1 -1
  119. package/dist/gene-bank/index.js +1 -0
  120. package/dist/gene-bank/index.js.map +1 -1
  121. package/dist/index.d.ts +54 -8
  122. package/dist/index.d.ts.map +1 -1
  123. package/dist/index.js +33 -5
  124. package/dist/index.js.map +1 -1
  125. package/dist/interfaces/StorageAdapter.d.ts +4 -1
  126. package/dist/interfaces/StorageAdapter.d.ts.map +1 -1
  127. package/dist/memory/AnalyticMemoryEngine.d.ts +83 -0
  128. package/dist/memory/AnalyticMemoryEngine.d.ts.map +1 -0
  129. package/dist/memory/AnalyticMemoryEngine.js +372 -0
  130. package/dist/memory/AnalyticMemoryEngine.js.map +1 -0
  131. package/dist/memory/LayeredMemory.d.ts +2 -0
  132. package/dist/memory/LayeredMemory.d.ts.map +1 -1
  133. package/dist/memory/LayeredMemory.js +2 -0
  134. package/dist/memory/LayeredMemory.js.map +1 -1
  135. package/dist/memory/PatternMemory.d.ts +38 -0
  136. package/dist/memory/PatternMemory.d.ts.map +1 -0
  137. package/dist/memory/PatternMemory.js +161 -0
  138. package/dist/memory/PatternMemory.js.map +1 -0
  139. package/dist/memory/PersonalNarrative.d.ts +51 -0
  140. package/dist/memory/PersonalNarrative.d.ts.map +1 -0
  141. package/dist/memory/PersonalNarrative.js +172 -0
  142. package/dist/memory/PersonalNarrative.js.map +1 -0
  143. package/dist/monitoring/AlertWebhooks.d.ts.map +1 -1
  144. package/dist/monitoring/AlertWebhooks.js +8 -5
  145. package/dist/monitoring/AlertWebhooks.js.map +1 -1
  146. package/dist/monitoring/MonitoringDashboard.js +1 -1
  147. package/dist/reasoning/Metacognition.d.ts +47 -0
  148. package/dist/reasoning/Metacognition.d.ts.map +1 -0
  149. package/dist/reasoning/Metacognition.js +274 -0
  150. package/dist/reasoning/Metacognition.js.map +1 -0
  151. package/dist/types/GenomeV2.d.ts +95 -0
  152. package/dist/types/GenomeV2.d.ts.map +1 -1
  153. package/dist/types/index.d.ts +159 -0
  154. package/dist/types/index.d.ts.map +1 -1
  155. package/dist/utils/tokens.d.ts +4 -0
  156. package/dist/utils/tokens.d.ts.map +1 -0
  157. package/dist/utils/tokens.js +16 -0
  158. package/dist/utils/tokens.js.map +1 -0
  159. package/dist/wrap/FunctionLLMAdapter.d.ts +9 -0
  160. package/dist/wrap/FunctionLLMAdapter.d.ts.map +1 -0
  161. package/dist/wrap/FunctionLLMAdapter.js +26 -0
  162. package/dist/wrap/FunctionLLMAdapter.js.map +1 -0
  163. package/dist/wrap/GenomeBuilder.d.ts +13 -0
  164. package/dist/wrap/GenomeBuilder.d.ts.map +1 -0
  165. package/dist/wrap/GenomeBuilder.js +222 -0
  166. package/dist/wrap/GenomeBuilder.js.map +1 -0
  167. package/dist/wrap/InMemoryStorageAdapter.d.ts +61 -0
  168. package/dist/wrap/InMemoryStorageAdapter.d.ts.map +1 -0
  169. package/dist/wrap/InMemoryStorageAdapter.js +153 -0
  170. package/dist/wrap/InMemoryStorageAdapter.js.map +1 -0
  171. package/dist/wrap/WrapOptions.d.ts +45 -0
  172. package/dist/wrap/WrapOptions.d.ts.map +1 -0
  173. package/dist/wrap/WrapOptions.js +2 -0
  174. package/dist/wrap/WrapOptions.js.map +1 -0
  175. package/dist/wrap/WrappedAgent.d.ts +77 -0
  176. package/dist/wrap/WrappedAgent.d.ts.map +1 -0
  177. package/dist/wrap/WrappedAgent.js +142 -0
  178. package/dist/wrap/WrappedAgent.js.map +1 -0
  179. package/dist/wrap/index.d.ts +6 -0
  180. package/dist/wrap/index.d.ts.map +1 -0
  181. package/dist/wrap/index.js +5 -0
  182. package/dist/wrap/index.js.map +1 -0
  183. package/package.json +13 -10
@@ -1,35 +1,60 @@
1
+ import { generateText } from '../utils/llmHelper.js';
2
+ import { estimateTokenCount } from '../../../utils/tokens.js';
1
3
  export class CrossoverMutationOperator {
4
+ llm;
2
5
  name = 'crossover_mutation';
3
- description = 'Genetic recombination from multiple high-fitness parents';
6
+ description = 'Intra-genome crossover: fuse successful gene techniques into struggling genes';
4
7
  targetChromosome = 'c1';
5
- population = [];
6
- addToPopulation(genome, fitness) {
7
- this.population.push({ genome, fitness });
8
- this.population.sort((a, b) => b.fitness - a.fitness);
9
- if (this.population.length > 10) {
10
- this.population = this.population.slice(0, 10);
11
- }
8
+ constructor(llm) {
9
+ this.llm = llm;
12
10
  }
13
11
  async mutate(context) {
14
- if (this.population.length < 2) {
15
- return {
16
- success: false,
17
- mutant: context.genome,
18
- mutation: this.createEmptyMutation(),
19
- description: 'Not enough parents for crossover (need at least 2)',
20
- expectedImprovement: 0,
21
- };
12
+ const mutant = this.deepClone(context.genome);
13
+ const allGenes = mutant.chromosomes.c1.operations;
14
+ const targetGene = context.targetGene
15
+ ?? this.findWeakestGene(allGenes);
16
+ if (!targetGene) {
17
+ return this.createFailure(context, 'No target gene for crossover');
18
+ }
19
+ const geneIndex = allGenes.findIndex(g => g.id === targetGene.id || g.category === targetGene.category);
20
+ if (geneIndex === -1) {
21
+ return this.createFailure(context, `Gene ${targetGene.category} not found`);
22
+ }
23
+ const donors = this.findDonorGenes(allGenes, targetGene);
24
+ if (donors.length === 0) {
25
+ return this.createFailure(context, 'No higher-fitness donor genes available for crossover');
22
26
  }
23
- const parents = this.selectParents();
24
- const offspring = this.createOffspring(parents, context);
27
+ let fusedContent;
28
+ if (this.llm) {
29
+ fusedContent = await this.llmFusion(targetGene, donors, context);
30
+ }
31
+ else {
32
+ fusedContent = this.mechanicalFusion(targetGene, donors);
33
+ }
34
+ mutant.chromosomes.c1.operations[geneIndex] = {
35
+ ...targetGene,
36
+ content: fusedContent,
37
+ tokenCount: estimateTokenCount(fusedContent),
38
+ version: (targetGene.version ?? 0) + 1,
39
+ lastModified: new Date(),
40
+ origin: 'mutation',
41
+ mutationHistory: [
42
+ ...(targetGene.mutationHistory || []),
43
+ {
44
+ operation: this.name,
45
+ timestamp: new Date(),
46
+ reason: `Crossover from ${donors.length} donor genes: ${donors.map(d => d.category).join(', ')}`,
47
+ },
48
+ ],
49
+ };
25
50
  const mutation = {
26
51
  id: this.generateId(),
27
52
  timestamp: new Date(),
28
53
  chromosome: 'c1',
29
54
  operation: this.name,
30
- before: JSON.stringify(context.genome.chromosomes.c1),
31
- after: JSON.stringify(offspring.chromosomes.c1),
32
- diff: `Crossover from ${parents.length} parents`,
55
+ before: targetGene.content,
56
+ after: fusedContent,
57
+ diff: `Crossover: fused ${donors.length} donors into ${targetGene.category}`,
33
58
  trigger: 'drift-detected',
34
59
  reason: context.reason,
35
60
  sandboxTested: false,
@@ -38,95 +63,139 @@ export class CrossoverMutationOperator {
38
63
  };
39
64
  return {
40
65
  success: true,
41
- mutant: offspring,
66
+ mutant,
42
67
  mutation,
43
- description: `Genetic recombination from ${parents.length} high-fitness parents`,
44
- expectedImprovement: 0.35,
68
+ description: `Fused techniques from ${donors.length} high-fitness genes into ${targetGene.category}`,
69
+ expectedImprovement: this.estimateImprovement(context),
45
70
  };
46
71
  }
47
72
  estimateImprovement(context) {
48
- if (this.population.length < 2) {
49
- return 0;
50
- }
51
- const avgParentFitness = this.population.slice(0, 3)
52
- .reduce((sum, p) => sum + p.fitness, 0) / Math.min(3, this.population.length);
53
- const currentFitness = context.genome.fitness.composite;
54
- const fitnessGap = avgParentFitness - currentFitness;
55
- return 0.35 + Math.max(0, fitnessGap * 0.5);
73
+ const allGenes = context.genome.chromosomes.c1.operations;
74
+ const target = context.targetGene ?? this.findWeakestGene(allGenes);
75
+ if (!target || allGenes.length < 2)
76
+ return 0.02;
77
+ const donors = this.findDonorGenes(allGenes, target);
78
+ if (donors.length === 0)
79
+ return 0.02;
80
+ const targetFitness = target.fitness?.quality ?? target.successRate ?? 0.5;
81
+ const avgDonorFitness = donors.reduce((sum, d) => sum + (d.fitness?.quality ?? d.successRate ?? 0.5), 0) / donors.length;
82
+ const gap = avgDonorFitness - targetFitness;
83
+ return Math.min(0.35, Math.max(0.05, gap * 0.5));
56
84
  }
57
- selectParents() {
58
- const numParents = Math.min(3, this.population.length);
59
- return this.population.slice(0, numParents);
85
+ findWeakestGene(genes) {
86
+ if (genes.length === 0)
87
+ return undefined;
88
+ return genes.reduce((weakest, gene) => {
89
+ const weakestFitness = weakest.fitness?.quality ?? weakest.successRate ?? 0.5;
90
+ const geneFitness = gene.fitness?.quality ?? gene.successRate ?? 0.5;
91
+ return geneFitness < weakestFitness ? gene : weakest;
92
+ });
60
93
  }
61
- createOffspring(parents, context) {
62
- const offspring = this.deepClone(context.genome);
63
- const allGenesByCategory = new Map();
64
- for (const parent of parents) {
65
- for (const gene of parent.genome.chromosomes.c1.operations) {
66
- if (!allGenesByCategory.has(gene.category)) {
67
- allGenesByCategory.set(gene.category, []);
68
- }
69
- allGenesByCategory.get(gene.category).push({
70
- ...gene,
71
- parentFitness: parent.fitness,
72
- });
73
- }
74
- }
75
- const offspringGenes = [];
76
- for (const [category, genes] of allGenesByCategory) {
77
- const sortedGenes = genes.sort((a, b) => {
78
- const fitnessA = a.parentFitness || 0;
79
- const fitnessB = b.parentFitness || 0;
80
- return fitnessB - fitnessA;
94
+ findDonorGenes(allGenes, target) {
95
+ const targetFitness = target.fitness?.quality ?? target.successRate ?? 0.5;
96
+ return allGenes
97
+ .filter(g => g.id !== target.id && g.category !== target.category)
98
+ .filter(g => {
99
+ const fitness = g.fitness?.quality ?? g.successRate ?? 0.5;
100
+ return fitness > targetFitness;
101
+ })
102
+ .sort((a, b) => {
103
+ const fitnessA = a.fitness?.quality ?? a.successRate ?? 0.5;
104
+ const fitnessB = b.fitness?.quality ?? b.successRate ?? 0.5;
105
+ return fitnessB - fitnessA;
106
+ })
107
+ .slice(0, 3);
108
+ }
109
+ async llmFusion(target, donors, context) {
110
+ const donorsText = donors.map((d, i) => {
111
+ const fitness = d.fitness?.quality ?? d.successRate ?? 0.5;
112
+ return `Donor ${i + 1} (${d.category}, fitness: ${(fitness * 100).toFixed(0)}%):
113
+ \`\`\`
114
+ ${d.content}
115
+ \`\`\``;
116
+ }).join('\n\n');
117
+ const targetFitness = target.fitness?.quality ?? target.successRate ?? 0.5;
118
+ const capabilities = (context.evidence?.capabilities ?? []);
119
+ const capText = capabilities.length > 0
120
+ ? `\nDECLINING CAPABILITIES:\n${capabilities.slice(0, 5).map(c => `- ${c.taskType} × ${c.gene}: ${(c.performanceScore * 100).toFixed(0)}%`).join('\n')}`
121
+ : '';
122
+ const prompt = `You are an expert AI agent prompt engineer performing GENETIC CROSSOVER.
123
+
124
+ TARGET GENE (struggling, needs improvement):
125
+ Category: ${target.category}
126
+ Fitness: ${(targetFitness * 100).toFixed(0)}%
127
+ \`\`\`
128
+ ${target.content}
129
+ \`\`\`
130
+
131
+ HIGH-PERFORMING DONOR GENES (from the same agent):
132
+ ${donorsText}
133
+ ${capText}
134
+
135
+ TASK: Cross-pollinate the target gene with successful techniques from the donors.
136
+
137
+ GUIDELINES:
138
+ 1. IDENTIFY what makes each donor gene successful (clarity, structure, specificity, etc.)
139
+ 2. TRANSFER those successful techniques to the target gene
140
+ 3. ADAPT the techniques to fit the target gene's category (${target.category})
141
+ 4. PRESERVE the target gene's core purpose
142
+ 5. Don't copy donor content verbatim — extract and adapt the underlying patterns
143
+
144
+ Return ONLY the improved gene content. No explanations.
145
+
146
+ IMPROVED ${target.category.toUpperCase()} GENE:`;
147
+ try {
148
+ const response = await generateText(this.llm, {
149
+ prompt,
150
+ temperature: 0.6,
151
+ maxTokens: 1500,
81
152
  });
82
- const bestGene = sortedGenes[0];
83
- if (sortedGenes.length > 1) {
84
- const combinedGene = this.combineGenes(sortedGenes[0], sortedGenes[1]);
85
- offspringGenes.push(combinedGene);
86
- }
87
- else {
88
- offspringGenes.push(bestGene);
89
- }
153
+ return response.content.trim();
154
+ }
155
+ catch {
156
+ return this.mechanicalFusion(target, donors);
90
157
  }
91
- offspring.chromosomes.c1.operations = offspringGenes;
92
- return offspring;
93
- }
94
- combineGenes(gene1, gene2) {
95
- const combined = {
96
- ...gene1,
97
- content: this.mergeCont(gene1.content, gene2.content),
98
- version: Math.max(gene1.version, gene2.version) + 1,
99
- lastModified: new Date(),
100
- successRate: Math.max(gene1.successRate, gene2.successRate),
101
- mutationHistory: [
102
- ...(gene1.mutationHistory || []),
103
- {
104
- operation: this.name,
105
- timestamp: new Date(),
106
- reason: 'Crossover recombination',
107
- },
108
- ],
109
- };
110
- return combined;
111
158
  }
112
- mergeContent(content1, content2) {
113
- const sentences1 = content1.split(/[.!?]\s+/).filter(s => s.length > 10);
114
- const sentences2 = content2.split(/[.!?]\s+/).filter(s => s.length > 10);
115
- const allSentences = [...sentences1];
116
- for (const s2 of sentences2) {
117
- const isSimilar = sentences1.some(s1 => this.similarity(s1, s2) > 0.7);
118
- if (!isSimilar) {
119
- allSentences.push(s2);
159
+ mechanicalFusion(target, donors) {
160
+ const targetSentences = target.content.split(/[.!?]\s+/).filter(s => s.length > 10);
161
+ const donorSentences = [];
162
+ for (const donor of donors) {
163
+ const sentences = donor.content.split(/[.!?]\s+/).filter(s => s.length > 10);
164
+ for (const s of sentences) {
165
+ const isDuplicate = targetSentences.some(ts => this.jaccard(ts, s) > 0.6);
166
+ if (!isDuplicate && donorSentences.length < 3) {
167
+ donorSentences.push(s);
168
+ }
120
169
  }
121
170
  }
122
- return allSentences.join('. ') + '.';
171
+ return [...targetSentences, ...donorSentences].join('. ') + '.';
172
+ }
173
+ jaccard(s1, s2) {
174
+ const w1 = new Set(s1.toLowerCase().split(/\s+/));
175
+ const w2 = new Set(s2.toLowerCase().split(/\s+/));
176
+ const intersection = new Set([...w1].filter(w => w2.has(w)));
177
+ const union = new Set([...w1, ...w2]);
178
+ return union.size > 0 ? intersection.size / union.size : 0;
123
179
  }
124
- similarity(s1, s2) {
125
- const words1 = new Set(s1.toLowerCase().split(/\s+/));
126
- const words2 = new Set(s2.toLowerCase().split(/\s+/));
127
- const intersection = new Set([...words1].filter(w => words2.has(w)));
128
- const union = new Set([...words1, ...words2]);
129
- return intersection.size / union.size;
180
+ createFailure(context, reason) {
181
+ return {
182
+ success: false,
183
+ mutant: context.genome,
184
+ mutation: {
185
+ id: this.generateId(),
186
+ timestamp: new Date(),
187
+ chromosome: 'c1',
188
+ operation: this.name,
189
+ before: '', after: '', diff: '',
190
+ trigger: 'drift-detected',
191
+ reason,
192
+ sandboxTested: false,
193
+ promoted: false,
194
+ proposer: 'system',
195
+ },
196
+ description: reason,
197
+ expectedImprovement: 0,
198
+ };
130
199
  }
131
200
  deepClone(genome) {
132
201
  return JSON.parse(JSON.stringify(genome));
@@ -134,27 +203,5 @@ export class CrossoverMutationOperator {
134
203
  generateId() {
135
204
  return `mut_crossover_${Date.now()}_${Math.random().toString(36).substring(7)}`;
136
205
  }
137
- createEmptyMutation() {
138
- return {
139
- id: this.generateId(),
140
- timestamp: new Date(),
141
- chromosome: 'c1',
142
- operation: this.name,
143
- before: '',
144
- after: '',
145
- diff: '',
146
- trigger: 'drift-detected',
147
- reason: 'Insufficient population for crossover',
148
- sandboxTested: false,
149
- promoted: false,
150
- proposer: 'system',
151
- };
152
- }
153
- getPopulationSize() {
154
- return this.population.length;
155
- }
156
- clearPopulation() {
157
- this.population = [];
158
- }
159
206
  }
160
207
  //# sourceMappingURL=CrossoverMutationOperator.js.map
@@ -1 +1 @@
1
- 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+ 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@@ -1,24 +1,21 @@
1
1
  import type { MutationType } from '../../../types/GenomeV2.js';
2
2
  import type { IMutationOperator, MutationContext, MutationResult } from '../../MutationOperator.js';
3
- import type { GeneBank } from '../../../gene-bank/GeneBank.js';
4
3
  import type { LLMAdapter } from '../../../interfaces/LLMAdapter.js';
4
+ import type { GeneBank } from '../../../gene-bank/GeneBank.js';
5
5
  export declare class PatternExtractionOperator implements IMutationOperator {
6
- private geneBank;
7
6
  private llm;
7
+ private geneBank?;
8
8
  name: MutationType;
9
9
  description: string;
10
10
  targetChromosome: 'c1';
11
- constructor(geneBank: GeneBank, llm: LLMAdapter);
11
+ constructor(llm: LLMAdapter, geneBank?: GeneBank | undefined);
12
12
  mutate(context: MutationContext): Promise<MutationResult>;
13
13
  estimateImprovement(context: MutationContext): number;
14
- private identifyWeaknesses;
15
- private findRelevantPatterns;
16
- private mapWeaknessToGeneType;
17
- private integratePatterns;
18
- private buildIntegrationPrompt;
19
- private parseEnhancedGenes;
14
+ private extractFromPatterns;
15
+ private extractFromGeneBank;
16
+ private categoryToType;
17
+ private createFailure;
20
18
  private deepClone;
21
19
  private generateId;
22
- private createEmptyMutation;
23
20
  }
24
21
  //# sourceMappingURL=PatternExtractionOperator.d.ts.map
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