npm - @optave/codegraph - Versions diffs - 3.3.1 → 3.4.0 - Mend

@optave/codegraph 3.3.1 → 3.4.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (1303) hide show

package/README.md +31 -28
package/dist/ast-analysis/engine.d.ts +15 -13
package/dist/ast-analysis/engine.d.ts.map +1 -1
package/dist/ast-analysis/engine.js +40 -26
package/dist/ast-analysis/engine.js.map +1 -1
package/dist/ast-analysis/metrics.d.ts +4 -18
package/dist/ast-analysis/metrics.d.ts.map +1 -1
package/dist/ast-analysis/metrics.js.map +1 -1
package/dist/ast-analysis/rules/csharp.d.ts +6 -23
package/dist/ast-analysis/rules/csharp.d.ts.map +1 -1
package/dist/ast-analysis/rules/csharp.js +0 -3
package/dist/ast-analysis/rules/csharp.js.map +1 -1
package/dist/ast-analysis/rules/go.d.ts +6 -23
package/dist/ast-analysis/rules/go.d.ts.map +1 -1
package/dist/ast-analysis/rules/go.js +0 -3
package/dist/ast-analysis/rules/go.js.map +1 -1
package/dist/ast-analysis/rules/index.d.ts +6 -30
package/dist/ast-analysis/rules/index.d.ts.map +1 -1
package/dist/ast-analysis/rules/index.js +0 -5
package/dist/ast-analysis/rules/index.js.map +1 -1
package/dist/ast-analysis/rules/java.d.ts +6 -23
package/dist/ast-analysis/rules/java.d.ts.map +1 -1
package/dist/ast-analysis/rules/java.js +0 -3
package/dist/ast-analysis/rules/java.js.map +1 -1
package/dist/ast-analysis/rules/javascript.d.ts +6 -30
package/dist/ast-analysis/rules/javascript.d.ts.map +1 -1
package/dist/ast-analysis/rules/javascript.js +0 -5
package/dist/ast-analysis/rules/javascript.js.map +1 -1
package/dist/ast-analysis/rules/php.d.ts +6 -23
package/dist/ast-analysis/rules/php.d.ts.map +1 -1
package/dist/ast-analysis/rules/php.js +0 -3
package/dist/ast-analysis/rules/php.js.map +1 -1
package/dist/ast-analysis/rules/python.d.ts +6 -23
package/dist/ast-analysis/rules/python.d.ts.map +1 -1
package/dist/ast-analysis/rules/python.js +0 -3
package/dist/ast-analysis/rules/python.js.map +1 -1
package/dist/ast-analysis/rules/ruby.d.ts +6 -23
package/dist/ast-analysis/rules/ruby.d.ts.map +1 -1
package/dist/ast-analysis/rules/ruby.js +0 -3
package/dist/ast-analysis/rules/ruby.js.map +1 -1
package/dist/ast-analysis/rules/rust.d.ts +6 -23
package/dist/ast-analysis/rules/rust.d.ts.map +1 -1
package/dist/ast-analysis/rules/rust.js +0 -3
package/dist/ast-analysis/rules/rust.js.map +1 -1
package/dist/ast-analysis/shared.d.ts +11 -105
package/dist/ast-analysis/shared.d.ts.map +1 -1
package/dist/ast-analysis/shared.js +1 -27
package/dist/ast-analysis/shared.js.map +1 -1
package/dist/ast-analysis/visitor-utils.d.ts +36 -11
package/dist/ast-analysis/visitor-utils.d.ts.map +1 -1
package/dist/ast-analysis/visitor-utils.js.map +1 -1
package/dist/ast-analysis/visitor.d.ts +2 -94
package/dist/ast-analysis/visitor.d.ts.map +1 -1
package/dist/ast-analysis/visitor.js +0 -16
package/dist/ast-analysis/visitor.js.map +1 -1
package/dist/ast-analysis/visitors/ast-store-visitor.d.ts +2 -10
package/dist/ast-analysis/visitors/ast-store-visitor.d.ts.map +1 -1
package/dist/ast-analysis/visitors/ast-store-visitor.js +10 -20
package/dist/ast-analysis/visitors/ast-store-visitor.js.map +1 -1
package/dist/ast-analysis/visitors/cfg-visitor.d.ts +4 -7
package/dist/ast-analysis/visitors/cfg-visitor.d.ts.map +1 -1
package/dist/ast-analysis/visitors/cfg-visitor.js +20 -65
package/dist/ast-analysis/visitors/cfg-visitor.js.map +1 -1
package/dist/ast-analysis/visitors/complexity-visitor.d.ts +6 -15
package/dist/ast-analysis/visitors/complexity-visitor.d.ts.map +1 -1
package/dist/ast-analysis/visitors/complexity-visitor.js +6 -41
package/dist/ast-analysis/visitors/complexity-visitor.js.map +1 -1
package/dist/ast-analysis/visitors/dataflow-visitor.d.ts +4 -7
package/dist/ast-analysis/visitors/dataflow-visitor.d.ts.map +1 -1
package/dist/ast-analysis/visitors/dataflow-visitor.js +19 -33
package/dist/ast-analysis/visitors/dataflow-visitor.js.map +1 -1
package/dist/cli/commands/ast.d.ts +2 -8
package/dist/cli/commands/ast.d.ts.map +1 -1
package/dist/cli/commands/ast.js.map +1 -1
package/dist/cli/commands/audit.d.ts +2 -8
package/dist/cli/commands/audit.d.ts.map +1 -1
package/dist/cli/commands/audit.js.map +1 -1
package/dist/cli/commands/batch.d.ts +2 -8
package/dist/cli/commands/batch.d.ts.map +1 -1
package/dist/cli/commands/batch.js +9 -3
package/dist/cli/commands/batch.js.map +1 -1
package/dist/cli/commands/branch-compare.d.ts +2 -6
package/dist/cli/commands/branch-compare.d.ts.map +1 -1
package/dist/cli/commands/branch-compare.js +1 -1
package/dist/cli/commands/branch-compare.js.map +1 -1
package/dist/cli/commands/brief.d.ts +2 -6
package/dist/cli/commands/brief.d.ts.map +1 -1
package/dist/cli/commands/brief.js.map +1 -1
package/dist/cli/commands/build.d.ts +2 -6
package/dist/cli/commands/build.d.ts.map +1 -1
package/dist/cli/commands/build.js +2 -2
package/dist/cli/commands/build.js.map +1 -1
package/dist/cli/commands/cfg.d.ts +2 -9
package/dist/cli/commands/cfg.d.ts.map +1 -1
package/dist/cli/commands/cfg.js.map +1 -1
package/dist/cli/commands/check.d.ts +2 -7
package/dist/cli/commands/check.d.ts.map +1 -1
package/dist/cli/commands/check.js.map +1 -1
package/dist/cli/commands/children.d.ts +2 -8
package/dist/cli/commands/children.d.ts.map +1 -1
package/dist/cli/commands/children.js.map +1 -1
package/dist/cli/commands/co-change.d.ts +2 -6
package/dist/cli/commands/co-change.d.ts.map +1 -1
package/dist/cli/commands/co-change.js +9 -5
package/dist/cli/commands/co-change.js.map +1 -1
package/dist/cli/commands/communities.d.ts +2 -7
package/dist/cli/commands/communities.d.ts.map +1 -1
package/dist/cli/commands/communities.js.map +1 -1
package/dist/cli/commands/complexity.d.ts +2 -8
package/dist/cli/commands/complexity.d.ts.map +1 -1
package/dist/cli/commands/complexity.js.map +1 -1
package/dist/cli/commands/context.d.ts +2 -9
package/dist/cli/commands/context.d.ts.map +1 -1
package/dist/cli/commands/context.js.map +1 -1
package/dist/cli/commands/cycles.d.ts +2 -6
package/dist/cli/commands/cycles.d.ts.map +1 -1
package/dist/cli/commands/cycles.js.map +1 -1
package/dist/cli/commands/dataflow.d.ts +2 -9
package/dist/cli/commands/dataflow.d.ts.map +1 -1
package/dist/cli/commands/dataflow.js.map +1 -1
package/dist/cli/commands/deps.d.ts +2 -7
package/dist/cli/commands/deps.d.ts.map +1 -1
package/dist/cli/commands/deps.js.map +1 -1
package/dist/cli/commands/diff-impact.d.ts +2 -6
package/dist/cli/commands/diff-impact.d.ts.map +1 -1
package/dist/cli/commands/diff-impact.js.map +1 -1
package/dist/cli/commands/embed.d.ts +2 -7
package/dist/cli/commands/embed.d.ts.map +1 -1
package/dist/cli/commands/embed.js +2 -1
package/dist/cli/commands/embed.js.map +1 -1
package/dist/cli/commands/export.d.ts +2 -6
package/dist/cli/commands/export.d.ts.map +1 -1
package/dist/cli/commands/export.js.map +1 -1
package/dist/cli/commands/exports.d.ts +2 -7
package/dist/cli/commands/exports.d.ts.map +1 -1
package/dist/cli/commands/exports.js.map +1 -1
package/dist/cli/commands/flow.d.ts +2 -9
package/dist/cli/commands/flow.d.ts.map +1 -1
package/dist/cli/commands/flow.js.map +1 -1
package/dist/cli/commands/fn-impact.d.ts +2 -9
package/dist/cli/commands/fn-impact.d.ts.map +1 -1
package/dist/cli/commands/fn-impact.js.map +1 -1
package/dist/cli/commands/impact.d.ts +2 -6
package/dist/cli/commands/impact.d.ts.map +1 -1
package/dist/cli/commands/impact.js.map +1 -1
package/dist/cli/commands/implementations.d.ts +2 -9
package/dist/cli/commands/implementations.d.ts.map +1 -1
package/dist/cli/commands/implementations.js.map +1 -1
package/dist/cli/commands/info.d.ts +2 -5
package/dist/cli/commands/info.d.ts.map +1 -1
package/dist/cli/commands/info.js +2 -1
package/dist/cli/commands/info.js.map +1 -1
package/dist/cli/commands/interfaces.d.ts +2 -9
package/dist/cli/commands/interfaces.d.ts.map +1 -1
package/dist/cli/commands/interfaces.js.map +1 -1
package/dist/cli/commands/map.d.ts +2 -6
package/dist/cli/commands/map.d.ts.map +1 -1
package/dist/cli/commands/map.js.map +1 -1
package/dist/cli/commands/mcp.d.ts +2 -6
package/dist/cli/commands/mcp.d.ts.map +1 -1
package/dist/cli/commands/mcp.js +4 -5
package/dist/cli/commands/mcp.js.map +1 -1
package/dist/cli/commands/models.d.ts +2 -5
package/dist/cli/commands/models.d.ts.map +1 -1
package/dist/cli/commands/models.js +5 -3
package/dist/cli/commands/models.js.map +1 -1
package/dist/cli/commands/owners.d.ts +2 -7
package/dist/cli/commands/owners.d.ts.map +1 -1
package/dist/cli/commands/owners.js.map +1 -1
package/dist/cli/commands/path.d.ts +2 -7
package/dist/cli/commands/path.d.ts.map +1 -1
package/dist/cli/commands/path.js.map +1 -1
package/dist/cli/commands/plot.d.ts +2 -6
package/dist/cli/commands/plot.d.ts.map +1 -1
package/dist/cli/commands/plot.js +3 -1
package/dist/cli/commands/plot.js.map +1 -1
package/dist/cli/commands/query.d.ts +2 -9
package/dist/cli/commands/query.d.ts.map +1 -1
package/dist/cli/commands/query.js.map +1 -1
package/dist/cli/commands/registry.d.ts +2 -15
package/dist/cli/commands/registry.d.ts.map +1 -1
package/dist/cli/commands/registry.js.map +1 -1
package/dist/cli/commands/roles.d.ts +2 -8
package/dist/cli/commands/roles.d.ts.map +1 -1
package/dist/cli/commands/roles.js.map +1 -1
package/dist/cli/commands/search.d.ts +2 -8
package/dist/cli/commands/search.d.ts.map +1 -1
package/dist/cli/commands/search.js +1 -5
package/dist/cli/commands/search.js.map +1 -1
package/dist/cli/commands/sequence.d.ts +2 -9
package/dist/cli/commands/sequence.d.ts.map +1 -1
package/dist/cli/commands/sequence.js.map +1 -1
package/dist/cli/commands/snapshot.d.ts +2 -10
package/dist/cli/commands/snapshot.d.ts.map +1 -1
package/dist/cli/commands/snapshot.js.map +1 -1
package/dist/cli/commands/stats.d.ts +2 -6
package/dist/cli/commands/stats.d.ts.map +1 -1
package/dist/cli/commands/stats.js.map +1 -1
package/dist/cli/commands/structure.d.ts +2 -6
package/dist/cli/commands/structure.d.ts.map +1 -1
package/dist/cli/commands/structure.js.map +1 -1
package/dist/cli/commands/triage.d.ts +2 -7
package/dist/cli/commands/triage.d.ts.map +1 -1
package/dist/cli/commands/triage.js.map +1 -1
package/dist/cli/commands/watch.d.ts +2 -5
package/dist/cli/commands/watch.d.ts.map +1 -1
package/dist/cli/commands/watch.js +1 -1
package/dist/cli/commands/watch.js.map +1 -1
package/dist/cli/commands/where.d.ts +2 -8
package/dist/cli/commands/where.d.ts.map +1 -1
package/dist/cli/commands/where.js +1 -1
package/dist/cli/commands/where.js.map +1 -1
package/dist/cli/index.d.ts +8 -17
package/dist/cli/index.d.ts.map +1 -1
package/dist/cli/index.js +27 -7
package/dist/cli/index.js.map +1 -1
package/dist/cli/shared/open-graph.d.ts +4 -7
package/dist/cli/shared/open-graph.d.ts.map +1 -1
package/dist/cli/shared/open-graph.js +0 -4
package/dist/cli/shared/open-graph.js.map +1 -1
package/dist/cli/shared/options.d.ts +8 -15
package/dist/cli/shared/options.d.ts.map +1 -1
package/dist/cli/shared/options.js +0 -2
package/dist/cli/shared/options.js.map +1 -1
package/dist/cli/shared/output.d.ts +1 -1
package/dist/cli/shared/output.d.ts.map +1 -1
package/dist/cli/shared/output.js.map +1 -1
package/dist/cli/types.d.ts +30 -0
package/dist/cli/types.d.ts.map +1 -0
package/dist/cli/types.js +2 -0
package/dist/cli/types.js.map +1 -0
package/dist/cli.d.ts.map +1 -1
package/dist/cli.js +2 -1
package/dist/cli.js.map +1 -1
package/dist/db/connection.d.ts +15 -19
package/dist/db/connection.d.ts.map +1 -1
package/dist/db/connection.js +2 -10
package/dist/db/connection.js.map +1 -1
package/dist/db/index.d.ts +5 -4
package/dist/db/index.d.ts.map +1 -1
package/dist/db/index.js +1 -1
package/dist/db/index.js.map +1 -1
package/dist/db/migrations.d.ts +8 -5
package/dist/db/migrations.d.ts.map +1 -1
package/dist/db/migrations.js +6 -3
package/dist/db/migrations.js.map +1 -1
package/dist/db/query-builder.d.ts +28 -46
package/dist/db/query-builder.d.ts.map +1 -1
package/dist/db/query-builder.js +2 -21
package/dist/db/query-builder.js.map +1 -1
package/dist/db/repository/base.d.ts +38 -101
package/dist/db/repository/base.d.ts.map +1 -1
package/dist/db/repository/base.js +6 -38
package/dist/db/repository/base.js.map +1 -1
package/dist/db/repository/build-stmts.d.ts +7 -16
package/dist/db/repository/build-stmts.d.ts.map +1 -1
package/dist/db/repository/build-stmts.js +0 -17
package/dist/db/repository/build-stmts.js.map +1 -1
package/dist/db/repository/cached-stmt.d.ts +2 -6
package/dist/db/repository/cached-stmt.d.ts.map +1 -1
package/dist/db/repository/cached-stmt.js +0 -5
package/dist/db/repository/cached-stmt.js.map +1 -1
package/dist/db/repository/cfg.d.ts +21 -14
package/dist/db/repository/cfg.d.ts.map +1 -1
package/dist/db/repository/cfg.js +0 -11
package/dist/db/repository/cfg.js.map +1 -1
package/dist/db/repository/cochange.d.ts +4 -10
package/dist/db/repository/cochange.d.ts.map +1 -1
package/dist/db/repository/cochange.js +0 -7
package/dist/db/repository/cochange.js.map +1 -1
package/dist/db/repository/complexity.d.ts +2 -10
package/dist/db/repository/complexity.d.ts.map +1 -1
package/dist/db/repository/complexity.js +0 -3
package/dist/db/repository/complexity.js.map +1 -1
package/dist/db/repository/dataflow.d.ts +2 -3
package/dist/db/repository/dataflow.d.ts.map +1 -1
package/dist/db/repository/dataflow.js +2 -3
package/dist/db/repository/dataflow.js.map +1 -1
package/dist/db/repository/edges.d.ts +25 -132
package/dist/db/repository/edges.d.ts.map +1 -1
package/dist/db/repository/edges.js +2 -58
package/dist/db/repository/edges.js.map +1 -1
package/dist/db/repository/embeddings.d.ts +4 -10
package/dist/db/repository/embeddings.d.ts.map +1 -1
package/dist/db/repository/embeddings.js +1 -8
package/dist/db/repository/embeddings.js.map +1 -1
package/dist/db/repository/graph-read.d.ts +5 -28
package/dist/db/repository/graph-read.d.ts.map +1 -1
package/dist/db/repository/graph-read.js +0 -8
package/dist/db/repository/graph-read.js.map +1 -1
package/dist/db/repository/in-memory-repository.d.ts +73 -141
package/dist/db/repository/in-memory-repository.d.ts.map +1 -1
package/dist/db/repository/in-memory-repository.js +28 -20
package/dist/db/repository/in-memory-repository.js.map +1 -1
package/dist/db/repository/index.d.ts +13 -13
package/dist/db/repository/index.d.ts.map +1 -1
package/dist/db/repository/index.js +1 -1
package/dist/db/repository/index.js.map +1 -1
package/dist/db/repository/nodes.d.ts +40 -105
package/dist/db/repository/nodes.d.ts.map +1 -1
package/dist/db/repository/nodes.js +29 -74
package/dist/db/repository/nodes.js.map +1 -1
package/dist/db/repository/sqlite-repository.d.ts +48 -93
package/dist/db/repository/sqlite-repository.d.ts.map +1 -1
package/dist/db/repository/sqlite-repository.js +7 -2
package/dist/db/repository/sqlite-repository.js.map +1 -1
package/dist/domain/analysis/brief.d.ts +16 -7
package/dist/domain/analysis/brief.d.ts.map +1 -1
package/dist/domain/analysis/brief.js +3 -8
package/dist/domain/analysis/brief.js.map +1 -1
package/dist/domain/analysis/context.d.ts +240 -2
package/dist/domain/analysis/context.d.ts.map +1 -1
package/dist/domain/analysis/context.js +39 -32
package/dist/domain/analysis/context.js.map +1 -1
package/dist/domain/analysis/dependencies.d.ts +113 -37
package/dist/domain/analysis/dependencies.d.ts.map +1 -1
package/dist/domain/analysis/dependencies.js +20 -27
package/dist/domain/analysis/dependencies.js.map +1 -1
package/dist/domain/analysis/exports.d.ts +7 -1
package/dist/domain/analysis/exports.d.ts.map +1 -1
package/dist/domain/analysis/exports.js +48 -33
package/dist/domain/analysis/exports.js.map +1 -1
package/dist/domain/analysis/impact.d.ts +128 -16
package/dist/domain/analysis/impact.d.ts.map +1 -1
package/dist/domain/analysis/impact.js +14 -54
package/dist/domain/analysis/impact.js.map +1 -1
package/dist/domain/analysis/implementations.d.ts +28 -28
package/dist/domain/analysis/implementations.d.ts.map +1 -1
package/dist/domain/analysis/implementations.js +0 -10
package/dist/domain/analysis/implementations.js.map +1 -1
package/dist/domain/analysis/module-map.d.ts +44 -24
package/dist/domain/analysis/module-map.d.ts.map +1 -1
package/dist/domain/analysis/module-map.js +19 -7
package/dist/domain/analysis/module-map.js.map +1 -1
package/dist/domain/analysis/roles.d.ts +13 -1
package/dist/domain/analysis/roles.d.ts.map +1 -1
package/dist/domain/analysis/roles.js +10 -2
package/dist/domain/analysis/roles.js.map +1 -1
package/dist/domain/analysis/symbol-lookup.d.ts +120 -7
package/dist/domain/analysis/symbol-lookup.d.ts.map +1 -1
package/dist/domain/analysis/symbol-lookup.js +11 -7
package/dist/domain/analysis/symbol-lookup.js.map +1 -1
package/dist/domain/graph/builder/context.d.ts +32 -67
package/dist/domain/graph/builder/context.d.ts.map +1 -1
package/dist/domain/graph/builder/context.js +0 -36
package/dist/domain/graph/builder/context.js.map +1 -1
package/dist/domain/graph/builder/helpers.d.ts +14 -14
package/dist/domain/graph/builder/helpers.d.ts.map +1 -1
package/dist/domain/graph/builder/helpers.js +62 -23
package/dist/domain/graph/builder/helpers.js.map +1 -1
package/dist/domain/graph/builder/incremental.d.ts +50 -13
package/dist/domain/graph/builder/incremental.d.ts.map +1 -1
package/dist/domain/graph/builder/incremental.js +10 -19
package/dist/domain/graph/builder/incremental.js.map +1 -1
package/dist/domain/graph/builder/pipeline.d.ts +2 -7
package/dist/domain/graph/builder/pipeline.d.ts.map +1 -1
package/dist/domain/graph/builder/pipeline.js +21 -19
package/dist/domain/graph/builder/pipeline.js.map +1 -1
package/dist/domain/graph/builder/stages/build-edges.d.ts +2 -4
package/dist/domain/graph/builder/stages/build-edges.d.ts.map +1 -1
package/dist/domain/graph/builder/stages/build-edges.js +6 -12
package/dist/domain/graph/builder/stages/build-edges.js.map +1 -1
package/dist/domain/graph/builder/stages/build-structure.d.ts +2 -4
package/dist/domain/graph/builder/stages/build-structure.d.ts.map +1 -1
package/dist/domain/graph/builder/stages/build-structure.js +8 -8
package/dist/domain/graph/builder/stages/build-structure.js.map +1 -1
package/dist/domain/graph/builder/stages/collect-files.d.ts +2 -4
package/dist/domain/graph/builder/stages/collect-files.d.ts.map +1 -1
package/dist/domain/graph/builder/stages/collect-files.js +0 -3
package/dist/domain/graph/builder/stages/collect-files.js.map +1 -1
package/dist/domain/graph/builder/stages/detect-changes.d.ts +2 -4
package/dist/domain/graph/builder/stages/detect-changes.d.ts.map +1 -1
package/dist/domain/graph/builder/stages/detect-changes.js +38 -45
package/dist/domain/graph/builder/stages/detect-changes.js.map +1 -1
package/dist/domain/graph/builder/stages/finalize.d.ts +2 -4
package/dist/domain/graph/builder/stages/finalize.d.ts.map +1 -1
package/dist/domain/graph/builder/stages/finalize.js +45 -26
package/dist/domain/graph/builder/stages/finalize.js.map +1 -1
package/dist/domain/graph/builder/stages/insert-nodes.d.ts +2 -4
package/dist/domain/graph/builder/stages/insert-nodes.d.ts.map +1 -1
package/dist/domain/graph/builder/stages/insert-nodes.js +57 -33
package/dist/domain/graph/builder/stages/insert-nodes.js.map +1 -1
package/dist/domain/graph/builder/stages/parse-files.d.ts +2 -4
package/dist/domain/graph/builder/stages/parse-files.d.ts.map +1 -1
package/dist/domain/graph/builder/stages/parse-files.js +0 -3
package/dist/domain/graph/builder/stages/parse-files.js.map +1 -1
package/dist/domain/graph/builder/stages/resolve-imports.d.ts +5 -17
package/dist/domain/graph/builder/stages/resolve-imports.d.ts.map +1 -1
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package/src/ast-analysis/rules/{javascript.js → javascript.ts} +11 -11
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package/src/ast-analysis/rules/{python.js → python.ts} +11 -9
package/src/ast-analysis/rules/{ruby.js → ruby.ts} +11 -9
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package/src/ast-analysis/{visitor.js → visitor.ts} +29 -31
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package/src/cli/commands/{ast.js → ast.ts} +3 -2
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package/src/cli/commands/{build.js → build.ts} +10 -8
package/src/cli/commands/{cfg.js → cfg.ts} +4 -3
package/src/cli/commands/{check.js → check.ts} +7 -6
package/src/cli/commands/{children.js → children.ts} +4 -3
package/src/cli/commands/{co-change.js → co-change.ts} +17 -12
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package/src/cli/commands/{deps.js → deps.ts} +4 -3
package/src/cli/commands/{diff-impact.js → diff-impact.ts} +3 -2
package/src/cli/commands/{embed.js → embed.ts} +6 -4
package/src/cli/commands/{export.js → export.ts} +8 -7
package/src/cli/commands/{exports.js → exports.ts} +3 -2
package/src/cli/commands/{flow.js → flow.ts} +4 -3
package/src/cli/commands/{fn-impact.js → fn-impact.ts} +5 -4
package/src/cli/commands/{impact.js → impact.ts} +3 -2
package/src/cli/commands/{implementations.js → implementations.ts} +4 -3
package/src/cli/commands/{info.js → info.ts} +6 -3
package/src/cli/commands/{interfaces.js → interfaces.ts} +4 -3
package/src/cli/commands/{map.js → map.ts} +3 -2
package/src/cli/commands/{mcp.js → mcp.ts} +8 -7
package/src/cli/commands/models.ts +29 -0
package/src/cli/commands/{owners.js → owners.ts} +3 -2
package/src/cli/commands/{path.js → path.ts} +6 -5
package/src/cli/commands/{plot.js → plot.ts} +35 -14
package/src/cli/commands/{query.js → query.ts} +8 -7
package/src/cli/commands/{registry.js → registry.ts} +12 -6
package/src/cli/commands/{roles.js → roles.ts} +3 -2
package/src/cli/commands/{search.js → search.ts} +12 -15
package/src/cli/commands/{sequence.js → sequence.ts} +5 -4
package/src/cli/commands/{snapshot.js → snapshot.ts} +5 -4
package/src/cli/commands/{stats.js → stats.ts} +2 -1
package/src/cli/commands/{structure.js → structure.ts} +4 -2
package/src/cli/commands/{triage.js → triage.ts} +14 -13
package/src/cli/commands/{watch.js → watch.ts} +3 -2
package/src/cli/commands/{where.js → where.ts} +3 -2
package/src/cli/{index.js → index.ts} +40 -15
package/src/cli/shared/{open-graph.js → open-graph.ts} +5 -5
package/src/cli/shared/{options.js → options.ts} +6 -6
package/src/cli/types.ts +33 -0
package/src/{cli.js → cli.ts} +3 -2
package/src/db/{connection.js → connection.ts} +46 -37
package/src/db/{index.js → index.ts} +4 -0
package/src/db/{migrations.js → migrations.ts} +33 -11
package/src/db/{query-builder.js → query-builder.ts} +50 -65
package/src/db/repository/base.ts +192 -0
package/src/db/repository/{build-stmts.js → build-stmts.ts} +28 -22
package/src/db/repository/{cached-stmt.js → cached-stmt.ts} +8 -7
package/src/db/repository/{cfg.js → cfg.ts} +27 -18
package/src/db/repository/{cochange.js → cochange.ts} +8 -14
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package/src/db/repository/dataflow.ts +19 -0
package/src/db/repository/{edges.js → edges.ts} +57 -95
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package/src/db/repository/{graph-read.js → graph-read.ts} +17 -17
package/src/db/repository/{in-memory-repository.js → in-memory-repository.ts} +155 -93
package/src/db/repository/{index.js → index.ts} +2 -0
package/src/db/repository/{nodes.js → nodes.ts} +120 -106
package/src/db/repository/{sqlite-repository.js → sqlite-repository.ts} +71 -42
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package/src/domain/analysis/{context.js → context.ts} +179 -79
package/src/domain/analysis/{dependencies.js → dependencies.ts} +149 -61
package/src/domain/analysis/{exports.js → exports.ts} +101 -54
package/src/domain/analysis/{impact.js → impact.ts} +178 -132
package/src/domain/analysis/{implementations.js → implementations.ts} +13 -14
package/src/domain/analysis/{module-map.js → module-map.ts} +128 -61
package/src/domain/analysis/{roles.js → roles.ts} +24 -6
package/src/domain/analysis/{symbol-lookup.js → symbol-lookup.ts} +78 -34
package/src/domain/graph/builder/context.ts +81 -0
package/src/domain/graph/builder/helpers.ts +289 -0
package/src/domain/graph/builder/{incremental.js → incremental.ts} +179 -76
package/src/domain/graph/builder/{pipeline.js → pipeline.ts} +33 -27
package/src/domain/graph/builder/stages/{build-edges.js → build-edges.ts} +174 -56
package/src/domain/graph/builder/stages/{build-structure.js → build-structure.ts} +34 -17
package/src/domain/graph/builder/stages/{collect-files.js → collect-files.ts} +6 -8
package/src/domain/graph/builder/stages/{detect-changes.js → detect-changes.ts} +156 -123
package/src/domain/graph/builder/stages/{finalize.js → finalize.ts} +79 -41
package/src/domain/graph/builder/stages/{insert-nodes.js → insert-nodes.ts} +102 -47
package/src/domain/graph/builder/stages/{parse-files.js → parse-files.ts} +2 -4
package/src/domain/graph/builder/stages/{resolve-imports.js → resolve-imports.ts} +26 -39
package/src/domain/graph/builder/stages/{run-analyses.js → run-analyses.ts} +10 -7
package/src/domain/graph/{change-journal.js → change-journal.ts} +48 -37
package/src/domain/graph/cycles.ts +66 -0
package/src/domain/graph/{journal.js → journal.ts} +22 -26
package/src/domain/graph/{resolve.js → resolve.ts} +125 -35
package/src/domain/graph/{watcher.js → watcher.ts} +45 -19
package/src/domain/{parser.js → parser.ts} +151 -105
package/src/domain/{queries.js → queries.ts} +1 -1
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package/src/domain/search/{models.js → models.ts} +62 -38
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package/src/domain/search/search/{hybrid.js → hybrid.ts} +69 -25
package/src/domain/search/search/{keyword.js → keyword.ts} +42 -16
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package/src/domain/search/stores/{fts5.js → fts5.ts} +8 -8
package/src/domain/search/stores/sqlite-blob.ts +15 -0
package/src/domain/search/strategies/{source.js → source.ts} +6 -1
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package/src/extractors/{go.js → go.ts} +105 -30
package/src/extractors/{hcl.js → hcl.ts} +52 -27
package/src/extractors/{helpers.js → helpers.ts} +20 -15
package/src/extractors/{java.js → java.ts} +43 -24
package/src/extractors/{javascript.js → javascript.ts} +165 -133
package/src/extractors/{php.js → php.ts} +45 -32
package/src/extractors/{python.js → python.ts} +63 -36
package/src/extractors/{ruby.js → ruby.ts} +40 -25
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package/src/features/{audit.js → audit.ts} +173 -54
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package/src/features/{cochange.js → cochange.ts} +117 -97
package/src/features/{communities.js → communities.ts} +85 -57
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package/src/features/{dataflow.js → dataflow.ts} +242 -143
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package/src/features/{flow.js → flow.ts} +63 -45
package/src/features/{graph-enrichment.js → graph-enrichment.ts} +138 -49
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package/src/features/{owners.js → owners.ts} +88 -73
package/src/features/{sequence.js → sequence.ts} +114 -65
package/src/features/shared/{find-nodes.js → find-nodes.ts} +10 -13
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package/src/features/{structure.js → structure.ts} +309 -130
package/src/features/{triage.js → triage.ts} +80 -42
package/src/graph/algorithms/{bfs.js → bfs.ts} +18 -10
package/src/graph/algorithms/{centrality.js → centrality.ts} +9 -5
package/src/graph/algorithms/{index.js → index.ts} +1 -0
package/src/graph/algorithms/leiden/LICENSE +24 -0
package/src/graph/algorithms/leiden/adapter.ts +204 -0
package/src/graph/algorithms/leiden/cpm.ts +77 -0
package/src/graph/algorithms/leiden/index.ts +185 -0
package/src/graph/algorithms/leiden/modularity.ts +122 -0
package/src/graph/algorithms/leiden/optimiser.ts +598 -0
package/src/graph/algorithms/leiden/partition.ts +479 -0
package/src/graph/algorithms/leiden/rng.ts +20 -0
package/src/graph/algorithms/louvain.ts +47 -0
package/src/graph/algorithms/{shortest-path.js → shortest-path.ts} +9 -10
package/src/graph/algorithms/{tarjan.js → tarjan.ts} +15 -14
package/src/graph/builders/{dependency.js → dependency.ts} +43 -17
package/src/graph/builders/structure.ts +58 -0
package/src/graph/builders/temporal.ts +51 -0
package/src/graph/classifiers/{risk.js → risk.ts} +52 -22
package/src/graph/classifiers/{roles.js → roles.ts} +32 -16
package/src/graph/{model.js → model.ts} +49 -58
package/src/index.cjs +1 -1
package/src/infrastructure/{config.js → config.ts} +82 -54
package/src/infrastructure/{logger.js → logger.ts} +6 -6
package/src/infrastructure/{native.js → native.ts} +16 -15
package/src/infrastructure/{registry.js → registry.ts} +48 -16
package/src/infrastructure/{test-filter.js → test-filter.ts} +1 -1
package/src/infrastructure/{update-check.js → update-check.ts} +30 -16
package/src/mcp/{middleware.js → middleware.ts} +6 -12
package/src/mcp/server.ts +249 -0
package/src/mcp/{tool-registry.js → tool-registry.ts} +16 -9
package/src/mcp/tools/{ast-query.js → ast-query.ts} +12 -1
package/src/mcp/tools/{audit.js → audit.ts} +14 -2
package/src/mcp/tools/batch-query.ts +22 -0
package/src/mcp/tools/{branch-compare.js → branch-compare.ts} +11 -1
package/src/mcp/tools/brief.ts +15 -0
package/src/mcp/tools/{cfg.js → cfg.ts} +13 -2
package/src/mcp/tools/{check.js → check.ts} +20 -3
package/src/mcp/tools/{co-changes.js → co-changes.ts} +10 -1
package/src/mcp/tools/code-owners.ts +22 -0
package/src/mcp/tools/{communities.js → communities.ts} +11 -1
package/src/mcp/tools/{complexity.js → complexity.ts} +14 -2
package/src/mcp/tools/{context.js → context.ts} +14 -1
package/src/mcp/tools/{dataflow.js → dataflow.ts} +15 -3
package/src/mcp/tools/{diff-impact.js → diff-impact.ts} +12 -1
package/src/mcp/tools/{execution-flow.js → execution-flow.ts} +13 -1
package/src/mcp/tools/{export-graph.js → export-graph.ts} +13 -3
package/src/mcp/tools/{file-deps.js → file-deps.ts} +9 -1
package/src/mcp/tools/{file-exports.js → file-exports.ts} +10 -1
package/src/mcp/tools/{find-cycles.js → find-cycles.ts} +5 -1
package/src/mcp/tools/{fn-impact.js → fn-impact.ts} +12 -1
package/src/mcp/tools/impact-analysis.ts +15 -0
package/src/mcp/tools/{implementations.js → implementations.ts} +11 -1
package/src/mcp/tools/{index.js → index.ts} +11 -3
package/src/mcp/tools/{interfaces.js → interfaces.ts} +11 -1
package/src/mcp/tools/{list-functions.js → list-functions.ts} +10 -1
package/src/mcp/tools/list-repos.ts +17 -0
package/src/mcp/tools/module-map.ts +13 -0
package/src/mcp/tools/{node-roles.js → node-roles.ts} +10 -1
package/src/mcp/tools/path.ts +24 -0
package/src/mcp/tools/{query.js → query.ts} +19 -2
package/src/mcp/tools/{semantic-search.js → semantic-search.ts} +13 -4
package/src/mcp/tools/{sequence.js → sequence.ts} +15 -2
package/src/mcp/tools/{structure.js → structure.ts} +11 -1
package/src/mcp/tools/symbol-children.ts +24 -0
package/src/mcp/tools/{triage.js → triage.ts} +20 -5
package/src/mcp/tools/{where.js → where.ts} +10 -1
package/src/presentation/{audit.js → audit.ts} +23 -6
package/src/presentation/batch.ts +49 -0
package/src/presentation/{branch-compare.js → branch-compare.ts} +59 -12
package/src/presentation/{brief.js → brief.ts} +26 -14
package/src/presentation/{cfg.js → cfg.ts} +37 -5
package/src/presentation/{check.js → check.ts} +61 -5
package/src/presentation/{cochange.js → cochange.ts} +30 -10
package/src/presentation/{colors.js → colors.ts} +8 -3
package/src/presentation/{communities.js → communities.ts} +45 -5
package/src/presentation/{complexity.js → complexity.ts} +49 -5
package/src/presentation/dataflow.ts +173 -0
package/src/presentation/{export.js → export.ts} +160 -95
package/src/presentation/{flow.js → flow.ts} +39 -8
package/src/presentation/{manifesto.js → manifesto.ts} +26 -7
package/src/presentation/{owners.js → owners.ts} +43 -6
package/src/presentation/queries-cli/{exports.js → exports.ts} +49 -8
package/src/presentation/queries-cli/{impact.js → impact.ts} +139 -23
package/src/presentation/queries-cli/{inspect.js → inspect.ts} +209 -28
package/src/presentation/queries-cli/{overview.js → overview.ts} +151 -30
package/src/presentation/queries-cli/{path.js → path.ts} +53 -9
package/src/presentation/{query.js → query.ts} +0 -4
package/src/presentation/{result-formatter.js → result-formatter.ts} +44 -48
package/src/presentation/sequence-renderer.ts +46 -0
package/src/presentation/{sequence.js → sequence.ts} +16 -5
package/src/presentation/{structure.js → structure.ts} +62 -5
package/src/presentation/{table.js → table.ts} +14 -8
package/src/presentation/{triage.js → triage.ts} +44 -8
package/src/presentation/{viewer.js → viewer.ts} +96 -54
package/src/shared/{constants.js → constants.ts} +4 -4
package/src/shared/{errors.js → errors.ts} +16 -20
package/src/shared/{file-utils.js → file-utils.ts} +55 -23
package/src/shared/{generators.js → generators.ts} +78 -31
package/src/shared/{hierarchy.js → hierarchy.ts} +12 -6
package/src/shared/{kinds.js → kinds.ts} +34 -12
package/src/shared/{normalize.js → normalize.ts} +37 -10
package/src/shared/{paginate.js → paginate.ts} +30 -19
package/src/types.ts +258 -17
package/src/vendor.d.ts +39 -0
package/dist/index.cjs.map +0 -1
package/dist/index.d.cts +0 -3
package/dist/index.d.cts.map +0 -1
package/src/cli/commands/models.js +0 -19
package/src/db/repository/base.js +0 -201
package/src/db/repository/dataflow.js +0 -17
package/src/domain/graph/builder/context.js +0 -85
package/src/domain/graph/builder/helpers.js +0 -218
package/src/domain/graph/cycles.js +0 -82
package/src/domain/search/stores/sqlite-blob.js +0 -24
package/src/features/batch.js +0 -156
package/src/graph/algorithms/louvain.js +0 -26
package/src/graph/builders/structure.js +0 -40
package/src/graph/builders/temporal.js +0 -33
package/src/mcp/server.js +0 -143
package/src/mcp/tools/batch-query.js +0 -11
package/src/mcp/tools/brief.js +0 -8
package/src/mcp/tools/code-owners.js +0 -12
package/src/mcp/tools/impact-analysis.js +0 -12
package/src/mcp/tools/list-repos.js +0 -11
package/src/mcp/tools/module-map.js +0 -6
package/src/mcp/tools/path.js +0 -12
package/src/mcp/tools/symbol-children.js +0 -14
package/src/presentation/batch.js +0 -26
package/src/presentation/dataflow.js +0 -110
package/src/presentation/sequence-renderer.js +0 -43
/package/src/cli/shared/{output.js → output.ts} +0 -0
/package/src/domain/graph/{builder.js → builder.ts} +0 -0
/package/src/extractors/{index.js → index.ts} +0 -0
/package/src/graph/builders/{index.js → index.ts} +0 -0
/package/src/graph/classifiers/{index.js → index.ts} +0 -0
/package/src/graph/{index.js → index.ts} +0 -0
/package/src/{index.js → index.ts} +0 -0
/package/src/infrastructure/{result-formatter.js → result-formatter.ts} +0 -0
/package/src/mcp/{index.js → index.ts} +0 -0
/package/src/presentation/queries-cli/{index.js → index.ts} +0 -0
/package/src/presentation/{queries-cli.js → queries-cli.ts} +0 -0

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package/dist/domain/graph/journal.js CHANGED Viewed

@@ -3,10 +3,6 @@ import path from 'node:path';
 import { debug, warn } from '../../infrastructure/logger.js';
 export const JOURNAL_FILENAME = 'changes.journal';
 const HEADER_PREFIX = '# codegraph-journal v1 ';
-/**
- * Read and validate the change journal.
- * Returns { valid, timestamp, changed[], removed[] } or { valid: false }.
- */
 export function readJournal(rootDir) {
     const journalPath = path.join(rootDir, '.codegraph', JOURNAL_FILENAME);
     let content;
@@ -50,17 +46,12 @@ export function readJournal(rootDir) {
     }
     return { valid: true, timestamp, changed, removed };
 }
-/**
- * Append changed/deleted paths to the journal.
- * Creates the journal with a header if it doesn't exist.
- */
 export function appendJournalEntries(rootDir, entries) {
     const dir = path.join(rootDir, '.codegraph');
     const journalPath = path.join(dir, JOURNAL_FILENAME);
     if (!fs.existsSync(dir)) {
         fs.mkdirSync(dir, { recursive: true });
     }
-    // If journal doesn't exist, create with a placeholder header
     if (!fs.existsSync(journalPath)) {
         fs.writeFileSync(journalPath, `${HEADER_PREFIX}0\n`);
     }
@@ -71,10 +62,6 @@ export function appendJournalEntries(rootDir, entries) {
     });
     fs.appendFileSync(journalPath, `${lines.join('\n')}\n`);
 }
-/**
- * Write a fresh journal header after a successful build.
- * Atomic: write to temp file then rename.
- */
 export function writeJournalHeader(rootDir, timestamp) {
     const dir = path.join(rootDir, '.codegraph');
     const journalPath = path.join(dir, JOURNAL_FILENAME);
@@ -88,7 +75,6 @@ export function writeJournalHeader(rootDir, timestamp) {
     }
     catch (err) {
         warn(`Failed to write journal header: ${err.message}`);
-        // Clean up temp file if rename failed
         try {
             fs.unlinkSync(tmpPath);
         }

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package/dist/domain/graph/resolve.d.ts CHANGED Viewed

@@ -1,27 +1,23 @@
+import type { BareSpecifier, BatchResolvedMap, ImportBatchItem, PathAliases } from '../../types.js';
 /**
  * Parse a bare specifier into { packageName, subpath }.
  * Scoped: "@scope/pkg/sub" → { packageName: "@scope/pkg", subpath: "./sub" }
  * Plain:  "pkg/sub"        → { packageName: "pkg", subpath: "./sub" }
  * No sub: "pkg"            → { packageName: "pkg", subpath: "." }
  */
-export function parseBareSpecifier(specifier: any): {
-    packageName: any;
-    subpath: string;
-} | null;
+export declare function parseBareSpecifier(specifier: string): BareSpecifier | null;
 /**
  * Resolve a bare specifier through the package.json exports field.
  * Returns an absolute path or null.
  */
-export function resolveViaExports(specifier: any, rootDir: any): string | null;
+export declare function resolveViaExports(specifier: string, rootDir: string): string | null;
 /** Clear the exports cache (for testing). */
-export function clearExportsCache(): void;
+export declare function clearExportsCache(): void;
 /**
  * Set the workspace map for a given rootDir.
  * Called by the build pipeline after detecting workspaces.
- * @param {string} rootDir
- * @param {Map<string, { dir: string, entry: string|null }>} map
  */
-export function setWorkspaces(rootDir: string, map: Map<string, {
+export declare function setWorkspaces(rootDir: string, map: Map<string, {
     dir: string;
     entry: string | null;
 }>): void;
@@ -31,46 +27,45 @@ export function setWorkspaces(rootDir: string, map: Map<string, {
  * For "@myorg/utils" → finds the workspace package dir → resolves entry point.
  * For "@myorg/utils/sub" → finds package dir → tries exports field → filesystem probe.
  *
- * @returns {string|null} Absolute path to resolved file, or null.
+ * @returns Absolute path to resolved file, or null.
  */
-export function resolveViaWorkspace(specifier: any, rootDir: any): string | null;
+export declare function resolveViaWorkspace(specifier: string, rootDir: string): string | null;
 /**
  * Check if a resolved relative path was resolved via workspace detection.
  * Used by computeConfidence to assign high confidence (0.95) to workspace imports.
  */
-export function isWorkspaceResolved(resolvedPath: any): boolean;
+export declare function isWorkspaceResolved(resolvedPath: string): boolean;
 /** Clear workspace caches (for testing). */
-export function clearWorkspaceCache(): void;
+export declare function clearWorkspaceCache(): void;
+/** Clear the .js → .ts remap cache (for testing). */
+export declare function clearJsToTsCache(): void;
 /**
  * Convert JS alias format { baseUrl, paths: { pattern: [targets] } }
  * to native format { baseUrl, paths: [{ pattern, targets }] }.
  */
-export function convertAliasesForNative(aliases: any): {
-    baseUrl: any;
+export declare function convertAliasesForNative(aliases: PathAliases | null | undefined): {
+    baseUrl: string;
     paths: {
         pattern: string;
-        targets: any;
+        targets: string[];
     }[];
 } | null;
+declare function resolveImportPathJS(fromFile: string, importSource: string, rootDir: string, aliases: PathAliases | null): string;
+declare function computeConfidenceJS(callerFile: string, targetFile: string, importedFrom: string | null): number;
 /**
  * Resolve a single import path.
  * Tries native, falls back to JS.
  */
-export function resolveImportPath(fromFile: any, importSource: any, rootDir: any, aliases: any): any;
+export declare function resolveImportPath(fromFile: string, importSource: string, rootDir: string, aliases: PathAliases | null): string;
 /**
  * Compute proximity-based confidence for call resolution.
  * Tries native, falls back to JS.
  */
-export function computeConfidence(callerFile: any, targetFile: any, importedFrom: any): any;
+export declare function computeConfidence(callerFile: string, targetFile: string, importedFrom: string | null): number;
 /**
  * Batch resolve multiple imports in a single native call.
  * Returns Map<"fromFile|importSource", resolvedPath> or null when native unavailable.
- * @param {Array} inputs - Array of { fromFile, importSource }
- * @param {string} rootDir - Project root
- * @param {object} aliases - Path aliases
- * @param {string[]} [knownFiles] - Optional file paths for FS cache (avoids syscalls)
  */
-export function resolveImportsBatch(inputs: any[], rootDir: string, aliases: object, knownFiles?: string[]): Map<any, any> | null;
-export function computeConfidenceJS(callerFile: any, targetFile: any, importedFrom: any): 1 | 0.3 | 0.5 | 0.95 | 0.7;
-export function resolveImportPathJS(fromFile: any, importSource: any, rootDir: any, aliases: any): any;
+export declare function resolveImportsBatch(inputs: ImportBatchItem[], rootDir: string, aliases: PathAliases | null, knownFiles?: string[] | null): BatchResolvedMap | null;
+export { computeConfidenceJS, resolveImportPathJS };
 //# sourceMappingURL=resolve.d.ts.map

package/dist/domain/graph/resolve.d.ts.map CHANGED Viewed

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package/dist/domain/graph/resolve.js CHANGED Viewed

@@ -4,6 +4,7 @@ import { loadNative } from '../../infrastructure/native.js';
 import { normalizePath } from '../../shared/constants.js';
 // ── package.json exports resolution ─────────────────────────────────
 /** Cache: packageDir → parsed exports field (or null) */
+// biome-ignore lint/suspicious/noExplicitAny: package.json exports field has no fixed schema
 const _exportsCache = new Map();
 /**
  * Parse a bare specifier into { packageName, subpath }.
@@ -53,6 +54,7 @@ function findPackageDir(packageName, rootDir) {
  * Read and cache the exports field from a package's package.json.
  * Returns the exports value or null.
  */
+// biome-ignore lint/suspicious/noExplicitAny: package.json exports field has no fixed schema
 function getPackageExports(packageDir) {
     if (_exportsCache.has(packageDir))
         return _exportsCache.get(packageDir);
@@ -201,8 +203,6 @@ const _workspaceResolvedPaths = new Set();
 /**
  * Set the workspace map for a given rootDir.
  * Called by the build pipeline after detecting workspaces.
- * @param {string} rootDir
- * @param {Map<string, { dir: string, entry: string|null }>} map
  */
 export function setWorkspaces(rootDir, map) {
     _workspaceCache.set(rootDir, map);
@@ -221,7 +221,7 @@ function getWorkspaces(rootDir) {
  * For "@myorg/utils" → finds the workspace package dir → resolves entry point.
  * For "@myorg/utils/sub" → finds package dir → tries exports field → filesystem probe.
  *
- * @returns {string|null} Absolute path to resolved file, or null.
+ * @returns Absolute path to resolved file, or null.
  */
 export function resolveViaWorkspace(specifier, rootDir) {
     const parsed = parseBareSpecifier(specifier);
@@ -295,6 +295,55 @@ export function clearWorkspaceCache() {
     _workspaceCache.clear();
     _workspaceResolvedPaths.clear();
 }
+// ── JS → TS extension remap cache ───────────────────────────────────
+/** Cache: absolute .js path → remapped .ts/.tsx relative path (or null if no TS file exists). */
+const _jsToTsCache = new Map();
+/**
+ * If `resolved` ends with `.js`, check whether a `.ts` or `.tsx` counterpart
+ * exists on disk and return its relative path from `rootDir`.  Results are
+ * cached for the lifetime of the process to avoid repeated stat calls in the
+ * batch hot path.
+ *
+ * The cache stores **absolute** `.ts`/`.tsx` paths (or `null`) so that the
+ * same cached entry is correct regardless of which `rootDir` is passed — the
+ * relative path is computed on every cache hit.  This is important for MCP
+ * `--multi-repo` mode where the same absolute `.js` file may be resolved with
+ * different `rootDir` values.
+ *
+ * Always returns a normalised relative path from `rootDir` — both the remap
+ * branch and the fallback compute `path.relative(rootDir, abs)` to ensure a
+ * consistent format regardless of whether the native resolver returned an
+ * absolute or relative path.
+ */
+function remapJsToTs(resolved, rootDir) {
+    if (!resolved.endsWith('.js'))
+        return resolved;
+    const abs = path.resolve(rootDir, resolved);
+    if (_jsToTsCache.has(abs)) {
+        const cachedAbs = _jsToTsCache.get(abs);
+        return cachedAbs
+            ? normalizePath(path.relative(rootDir, cachedAbs))
+            : normalizePath(path.relative(rootDir, abs));
+    }
+    const tsAbs = abs.replace(/\.js$/, '.ts');
+    if (fs.existsSync(tsAbs)) {
+        _jsToTsCache.set(abs, tsAbs);
+        return normalizePath(path.relative(rootDir, tsAbs));
+    }
+    const tsxAbs = abs.replace(/\.js$/, '.tsx');
+    if (fs.existsSync(tsxAbs)) {
+        _jsToTsCache.set(abs, tsxAbs);
+        return normalizePath(path.relative(rootDir, tsxAbs));
+    }
+    _jsToTsCache.set(abs, null);
+    // Normalise fallback to relative to stay consistent with the remap branch —
+    // avoids a format mismatch if the native resolver ever returns an absolute path.
+    return normalizePath(path.relative(rootDir, abs));
+}
+/** Clear the .js → .ts remap cache (for testing). */
+export function clearJsToTsCache() {
+    _jsToTsCache.clear();
+}
 // ── Alias format conversion ─────────────────────────────────────────
 /**
  * Convert JS alias format { baseUrl, paths: { pattern: [targets] } }
@@ -425,7 +474,11 @@ export function resolveImportPath(fromFile, importSource, rootDir, aliases) {
     if (native) {
         try {
             const result = native.resolveImport(fromFile, importSource, rootDir, convertAliasesForNative(aliases));
-            return normalizePath(path.normalize(result));
+            const normalized = normalizePath(path.normalize(result));
+            // The native resolver's .js → .ts remap fails when paths contain
+            // unresolved ".." components (PathBuf::components().collect() doesn't
+            // collapse parent refs). Apply the remap on the JS side as a fallback.
+            return remapJsToTs(normalized, rootDir);
         }
         catch {
             // fall through to JS
@@ -452,10 +505,6 @@ export function computeConfidence(callerFile, targetFile, importedFrom) {
 /**
  * Batch resolve multiple imports in a single native call.
  * Returns Map<"fromFile|importSource", resolvedPath> or null when native unavailable.
- * @param {Array} inputs - Array of { fromFile, importSource }
- * @param {string} rootDir - Project root
- * @param {object} aliases - Path aliases
- * @param {string[]} [knownFiles] - Optional file paths for FS cache (avoids syscalls)
  */
 export function resolveImportsBatch(inputs, rootDir, aliases, knownFiles) {
     const native = loadNative();
@@ -469,7 +518,11 @@ export function resolveImportsBatch(inputs, rootDir, aliases, knownFiles) {
         const results = native.resolveImports(nativeInputs, rootDir, convertAliasesForNative(aliases), knownFiles || null);
         const map = new Map();
         for (const r of results) {
-            map.set(`${r.fromFile}|${r.importSource}`, normalizePath(path.normalize(r.resolvedPath)));
+            const normalized = normalizePath(path.normalize(r.resolvedPath));
+            // Native resolver's .js → .ts remap fails on unnormalized paths —
+            // apply JS-side fallback (same fix as resolveImportPath).
+            const resolved = remapJsToTs(normalized, rootDir);
+            map.set(`${r.fromFile}|${r.importSource}`, resolved);
         }
         return map;
     }

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	@@ -1 +1 @@
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package/dist/domain/graph/watcher.d.ts CHANGED Viewed

@@ -1,2 +1,4 @@
-export function watchProject(rootDir: any, opts?: {}): Promise<void>;
+export declare function watchProject(rootDir: string, opts?: {
+    engine?: string;
+}): Promise<void>;
 //# sourceMappingURL=watcher.d.ts.map

package/dist/domain/graph/watcher.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"watcher.d.ts","sourceRoot":"","sources":["../../../src/domain/graph/watcher.js"],"names":[],"mappings":"AAoBA,~~qEAgJC~~"}
1	+ {"version":3,"file":"watcher.d.ts","sourceRoot":"","sources":["../../../src/domain/graph/watcher.ts"],"names":[],"mappings":"AAoBA,wBAAsB,YAAY,CAAC,OAAO,EAAE,MAAM,EAAE,IAAI,GAAE;IAAE,MAAM,CAAC,EAAE,MAAM,CAAA;CAAO,GAAG,OAAO,CAAC,IAAI,CAAC,CA0KjG"}

package/dist/domain/graph/watcher.js CHANGED Viewed

@@ -21,8 +21,14 @@ export async function watchProject(rootDir, opts = {}) {
         throw new DbError('No graph.db found. Run `codegraph build` first.', { file: dbPath });
     }
     const db = openDb(dbPath);
+    // Alias for functions expecting the project's BetterSqlite3Database interface
+    const typedDb = db;
     initSchema(db);
-    const engineOpts = { engine: opts.engine || 'auto' };
+    const engineOpts = {
+        engine: (opts.engine || 'auto'),
+        dataflow: false,
+        ast: false,
+    };
     const { name: engineName, version: engineVersion } = getActiveEngine(engineOpts);
     console.log(`Watch mode using ${engineName} engine${engineVersion ? ` (v${engineVersion})` : ''}`);
     const cache = createParseTreeCache();
@@ -33,7 +39,7 @@ export async function watchProject(rootDir, opts = {}) {
         insertNode: db.prepare('INSERT OR IGNORE INTO nodes (name, kind, file, line, end_line) VALUES (?, ?, ?, ?, ?)'),
         getNodeId: {
             get: (name, kind, file, line) => {
-                const id = getNodeIdQuery(db, name, kind, file, line);
+                const id = getNodeIdQuery(typedDb, name, kind, file, line);
                 return id != null ? { id } : undefined;
             },
         },
@@ -50,7 +56,9 @@ export async function watchProject(rootDir, opts = {}) {
     const origDeleteEdges = db.prepare(`DELETE FROM edges WHERE source_id IN (SELECT id FROM nodes WHERE file = @f) OR target_id IN (SELECT id FROM nodes WHERE file = @f)`);
     const origCountEdges = db.prepare(`SELECT COUNT(*) as c FROM edges WHERE source_id IN (SELECT id FROM nodes WHERE file = @f) OR target_id IN (SELECT id FROM nodes WHERE file = @f)`);
     stmts.deleteEdgesForFile = { run: (f) => origDeleteEdges.run({ f }) };
-    stmts.countEdgesForFile = { get: (f) => origCountEdges.get({ f }) };
+    stmts.countEdgesForFile = {
+        get: (f) => origCountEdges.get({ f }),
+    };
     const pending = new Set();
     let timer = null;
     const DEBOUNCE_MS = 300;
@@ -59,9 +67,9 @@ export async function watchProject(rootDir, opts = {}) {
         pending.clear();
         const results = [];
         for (const filePath of files) {
-            const result = await rebuildFile(db, rootDir, filePath, stmts, engineOpts, cache, {
-                diffSymbols,
-            });
+            const result = (await rebuildFile(db, rootDir, filePath, stmts, engineOpts, cache, {
+                diffSymbols: diffSymbols,
+            }));
             if (result)
                 results.push(result);
         }

package/dist/domain/graph/watcher.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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package/dist/domain/parser.d.ts CHANGED Viewed

@@ -1,104 +1,58 @@
-export function createParsers(): Promise<any>;
+import { Parser } from 'web-tree-sitter';
+import type { EngineMode, ExtractorOutput, LanguageRegistryEntry } from '../types.js';
+export { extractCSharpSymbols, extractGoSymbols, extractHCLSymbols, extractJavaSymbols, extractPHPSymbols, extractPythonSymbols, extractRubySymbols, extractRustSymbols, extractSymbols, } from '../extractors/index.js';
+export type { LanguageRegistryEntry } from '../types.js';
+interface ParseEngineOpts {
+    engine?: EngineMode;
+    dataflow?: boolean;
+    ast?: boolean;
+}
+export declare function createParsers(): Promise<Map<string, Parser | null>>;
 /**
  * Dispose all cached WASM parsers and queries to free WASM linear memory.
  * Call this between repeated builds in the same process (e.g. benchmarks)
  * to prevent memory accumulation that can cause segfaults.
  */
-export function disposeParsers(): void;
-export function getParser(parsers: any, filePath: any): any;
+export declare function disposeParsers(): void;
+export declare function getParser(parsers: Map<string, Parser | null>, filePath: string): Parser | null;
 /**
  * Pre-parse files missing `_tree` via WASM so downstream phases (CFG, dataflow)
  * don't each need to create parsers and re-parse independently.
  * Only parses files whose extension is in SUPPORTED_EXTENSIONS.
- *
- * @param {Map<string, object>} fileSymbols - Map<relPath, { definitions, _tree, _langId, ... }>
- * @param {string} rootDir - absolute project root
  */
-export function ensureWasmTrees(fileSymbols: Map<string, object>, rootDir: string): Promise<void>;
+export declare function ensureWasmTrees(fileSymbols: Map<string, any>, rootDir: string): Promise<void>;
 /**
  * Check whether the required WASM grammar files exist on disk.
  */
-export function isWasmAvailable(): boolean;
+export declare function isWasmAvailable(): boolean;
+/**
+ * Declarative registry of all supported languages.
+ * Adding a new language requires only a new entry here + its extractor function.
+ */
+export declare const LANGUAGE_REGISTRY: LanguageRegistryEntry[];
+export declare const SUPPORTED_EXTENSIONS: Set<string>;
 /**
  * Parse a single file and return normalized symbols.
- *
- * @param {string} filePath  Absolute path to the file.
- * @param {string} source    Source code string.
- * @param {object} [opts]    Options: { engine: 'native'|'wasm'|'auto' }
- * @returns {Promise<{definitions, calls, imports, classes, exports}|null>}
  */
-export function parseFileAuto(filePath: string, source: string, opts?: object): Promise<{
-    definitions: any;
-    calls: any;
-    imports: any;
-    classes: any;
-    exports: any;
-} | null>;
+export declare function parseFileAuto(filePath: string, source: string, opts?: ParseEngineOpts): Promise<ExtractorOutput | null>;
 /**
  * Parse multiple files in bulk and return a Map<relPath, symbols>.
- *
- * @param {string[]} filePaths  Absolute paths to files.
- * @param {string}   rootDir    Project root for computing relative paths.
- * @param {object}   [opts]     Options: { engine: 'native'|'wasm'|'auto' }
- * @returns {Promise<Map<string, {definitions, calls, imports, classes, exports}>>}
  */
-export function parseFilesAuto(filePaths: string[], rootDir: string, opts?: object): Promise<Map<string, {
-    definitions: any;
-    calls: any;
-    imports: any;
-    classes: any;
-    exports: any;
-}>>;
+export declare function parseFilesAuto(filePaths: string[], rootDir: string, opts?: ParseEngineOpts): Promise<Map<string, ExtractorOutput>>;
 /**
  * Report which engine is active.
- *
- * @param {object} [opts]  Options: { engine: 'native'|'wasm'|'auto' }
- * @returns {{ name: 'native'|'wasm', version: string|null }}
  */
-export function getActiveEngine(opts?: object): {
-    name: "native" | "wasm";
+export declare function getActiveEngine(opts?: ParseEngineOpts): {
+    name: 'native' | 'wasm';
     version: string | null;
 };
 /**
  * Create a native ParseTreeCache for incremental parsing.
  * Returns null if the native engine is unavailable (WASM fallback).
  */
-export function createParseTreeCache(): any;
+export declare function createParseTreeCache(): any;
 /**
  * Parse a file incrementally using the cache, or fall back to full parse.
- *
- * @param {object|null} cache  ParseTreeCache instance (or null for full parse)
- * @param {string} filePath    Absolute path to the file
- * @param {string} source      Source code string
- * @param {object} [opts]      Options forwarded to parseFileAuto on fallback
- * @returns {Promise<{definitions, calls, imports, classes, exports}|null>}
- */
-export function parseFileIncremental(cache: object | null, filePath: string, source: string, opts?: object): Promise<{
-    definitions: any;
-    calls: any;
-    imports: any;
-    classes: any;
-    exports: any;
-} | null>;
-/**
- * Declarative registry of all supported languages.
- * Adding a new language requires only a new entry here + its extractor function.
  */
-export const LANGUAGE_REGISTRY: ({
-    id: string;
-    extensions: string[];
-    grammarFile: string;
-    extractor: typeof extractSymbols;
-    required: boolean;
-} | {
-    id: string;
-    extensions: string[];
-    grammarFile: string;
-    extractor: typeof extractHCLSymbols;
-    required: boolean;
-})[];
-export const SUPPORTED_EXTENSIONS: Set<any>;
-import { extractSymbols } from '../extractors/index.js';
-import { extractHCLSymbols } from '../extractors/index.js';
-export { extractCSharpSymbols, extractGoSymbols, extractHCLSymbols, extractJavaSymbols, extractPHPSymbols, extractPythonSymbols, extractRubySymbols, extractRustSymbols, extractSymbols } from "../extractors/index.js";
+export declare function parseFileIncremental(cache: any, filePath: string, source: string, opts?: ParseEngineOpts): Promise<ExtractorOutput | null>;
 //# sourceMappingURL=parser.d.ts.map

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