@opentrons/shared-data 0.1.5 → 0.1.6-alpha.5

package/lib/pipette/schemas/1/pipetteNameSpecsSchema.json

@@ -1,89 +0,0 @@
-{
-    "$schema": "http://json-schema.org/draft-07/schema#",
-    "definitions": {
-        "positiveNumber": {
-            "type": "number",
-            "minimum": 0
-        },
-        "channels": {
-            "enum": [1, 8, 96]
-        },
-        "displayCategory": {
-            "type": "string",
-            "enum": ["GEN1", "GEN2", "FLEX"]
-        },
-        "valuesByApiLevel": {
-            "type": "object",
-            "required": ["2.0"],
-            "additionalProperties": false,
-            "patternProperties": {
-                "^\\d\\.\\d+$": {
-                    "$ref": "#/definitions/positiveNumber"
-                }
-            }
-        },
-        "configValue": {
-            "type": "object",
-            "required": ["value", "min", "max", "valuesByApiLevel"],
-            "properties": {
-                "value": {
-                    "$ref": "#/definitions/positiveNumber",
-                    "$comment": "This key is deprecated in favor of valuesByApiLevel"
-                },
-                "min": { "$ref": "#/definitions/positiveNumber" },
-                "max": { "$ref": "#/definitions/positiveNumber" },
-                "valuesByApiLevel": { "$ref": "#/definitions/valuesByApiLevel" }
-            }
-        }
-    },
-    "description": "Model-level pipette specifications. These do not vary across different versions of the same model",
-    "type": "object",
-    "$comment": "Example key: 'p10_single'",
-    "patternProperties": {
-        ".*": {
-            "type": "object",
-            "required": [
-                "channels",
-                "displayName",
-                "defaultAspirateFlowRate",
-                "defaultDispenseFlowRate",
-                "defaultBlowOutFlowRate",
-                "maxVolume",
-                "minVolume",
-                "defaultTipracks"
-            ],
-            "additionalProperties": false,
-            "properties": {
-                "channels": { "$ref": "#/definitions/channels" },
-                "defaultAspirateFlowRate": {
-                    "$ref": "#/definitions/configValue"
-                },
-                "defaultDispenseFlowRate": {
-                    "$ref": "#/definitions/configValue"
-                },
-                "defaultBlowOutFlowRate": {
-                    "$ref": "#/definitions/configValue"
-                },
-                "displayName": { "type": "string" },
-                "displayCategory": { "$ref": "#/definitions/displayCategory" },
-                "maxVolume": { "$ref": "#/definitions/positiveNumber" },
-                "minVolume": { "$ref": "#/definitions/positiveNumber" },
-                "smoothieConfigs": {
-                    "type": "object",
-                    "description": "Runtime smoothie configs per pipette type",
-                    "properties": {
-                        "stepsPerMM": { "type": "number" },
-                        "homePosition": { "type": "number" },
-                        "travelDistance": { "type": "number" }
-                    }
-                },
-                "defaultTipracks": {
-                    "type": "array",
-                    "items": {
-                        "type": "string"
-                    }
-                }
-            }
-        }
-    }
-}

package/lib/pipette/schemas/2/pipetteGeometrySchema.json

@@ -1,89 +0,0 @@
-{
-    "$schema": "http://json-schema.org/draft-07/schema#",
-    "definitions": {
-        "xyzArray": {
-            "type": "array",
-            "description": "Array of 3 numbers, [x, y, z]",
-            "items": { "type": "number" },
-            "minItems": 3,
-            "maxItems": 3
-        },
-        "nozzleName": {
-            "type": "string",
-            "pattern": "[A-Z]+[0-9]+"
-        },
-        "rowName": {
-            "type": "string",
-            "pattern": "[A-Z]+",
-            "description": "The name of a row of nozzles"
-        },
-        "columnName": {
-            "type": "string",
-            "pattern": "[0-9]+",
-            "description": "The name of a column of nozzles"
-        }
-    },
-    "type": "object",
-    "required": ["$otSharedSchema", "nozzleOffset", "pathTo3D"],
-    "additionalProperties": false,
-    "properties": {
-        "$otSharedSchema": {
-            "type": "string",
-            "description": "The path to a valid Opentrons shared schema relative to the shared-data directory, without its extension. For instance, #/pipette/schemas/2/pipetteGeometrySchema.json is a reference to this schema."
-        },
-        "nozzleOffset": { "$ref": "#/definitions/xyzArray" },
-        "pipetteBoundingBoxOffsets": {
-            "description": "Offsets from the pipette mount position to the back-left & front-right corners of the pipette's bounding box which includes the outer casing and all nozzles.",
-            "type": "object",
-            "properties": {
-                "backLeftCorner": { "$ref": "#/definitions/xyzArray" },
-                "frontRightCorner": { "$ref": "#/definitions/xyzArray" }
-            }
-        },
-        "pathTo3D": {
-            "description": "path to the gltf file representing the 3D pipette model",
-            "type": "string",
-            "pattern": "^pipette/definitions/[2]/geometry/([a-z]*_[a-z]*)+/p[0-9]{2,4}/[a-z]*[.]gltf"
-        },
-        "orderedRows": {
-            "type": "array",
-            "items": {
-                "type": "object",
-                "description": "A row of nozzle keys",
-                "required": ["key", "orderedNozzles"],
-                "properties": {
-                    "key": { "$ref": "#/definitions/rowName" },
-                    "orderedNozzles": {
-                        "type": "array",
-                        "description": "The list of nozzle names in this row",
-                        "items": { "$ref": "#/definitions/nozzleName" }
-                    }
-                }
-            }
-        },
-        "orderedColumns": {
-            "type": "array",
-            "items": {
-                "type": "object",
-                "description": "A column of nozzle keys",
-                "required": ["key", "orderedNozzles"],
-                "properties": {
-                    "key": { "$ref": "#/definitions/columnName" },
-                    "orderedNozzles": {
-                        "type": "array",
-                        "description": "The list of nozzle names in this column",
-                        "items": { "$ref": "#/definitions/nozzleName" }
-                    }
-                }
-            }
-        },
-        "nozzleMap": {
-            "type": "object",
-            "description": "Unordered object of well objects with position and dimensional information",
-            "additionalProperties": false,
-            "patternProperties": {
-                "[A-Z]+[0-9]+": { "$ref": "#/definitions/xyzArray" }
-            }
-        }
-    }
-}

package/lib/pipette/schemas/2/pipetteLiquidPropertiesSchema.json

@@ -1,120 +0,0 @@
-{
-    "$schema": "http://json-schema.org/draft-07/schema#",
-    "definitions": {
-        "positiveNumber": {
-            "type": "number",
-            "minimum": 0
-        },
-        "xyzArray": {
-            "type": "array",
-            "description": "Array of 3 numbers, [x, y, z]",
-            "items": { "type": "number" },
-            "minItems": 3,
-            "maxItems": 3
-        },
-        "liquidHandlingSpecs": {
-            "description": "Object containing linear equations for translating between uL of liquid and mm of plunger travel. There is one linear equation for aspiration and one for dispense",
-            "type": "object",
-            "required": ["aspirate", "dispense"],
-            "additionalProperties": false,
-            "properties": {
-                "aspirate": { "$ref": "#/definitions/xyzArray" },
-                "dispense": { "$ref": "#/definitions/xyzArray" }
-            }
-        },
-        "flowRate": {
-            "description": "Object with a default value and optional dict keyed by api level. If API level is unavailable, default is used.",
-            "type": "object",
-            "required": ["default", "valuesByApiLevel"],
-            "properties": {
-                "default": {
-                    "$ref": "#/definitions/positiveNumber",
-                    "$comment": "The default value of the flowrate"
-                },
-                "valuesByApiLevel": { "type": "object", "required": [] }
-            }
-        }
-    },
-    "type": "object",
-    "required": [
-        "$otSharedSchema",
-        "maxVolume",
-        "minVolume",
-        "defaultTipracks",
-        "supportedTips",
-        "defaultTipOverlapDictionary"
-    ],
-    "additionalProperties": false,
-    "properties": {
-        "$otSharedSchema": {
-            "type": "string",
-            "description": "The path to a valid Opentrons shared schema relative to the shared-data directory, without its extension. For instance, #/pipette/schemas/2/pipetteLiquidPropertiesSchema.json is a reference to this schema."
-        },
-        "supportedTips": {
-            "type": "object",
-            "description": "A container of supported tip types",
-            "properties": {
-                "patternProperties": {
-                    "description": "Tip specific liquid handling properties for a given pipette. Using the active tip on a pipette, we will look up the pipetting configurations associated with that tip+pipette combo.",
-                    "type": "object",
-                    "$comment": "Example key: 't50'",
-                    "^t[0-9]{2,4}": {
-                        "required": [
-                            "defaultAspirateFlowRate",
-                            "defaultDispenseFlowRate",
-                            "defaultBlowOutFlowRate",
-                            "aspirate",
-                            "dispense"
-                        ],
-                        "properties": {
-                            "defaultAspirateFlowRate": {
-                                "$ref": "#/definitions/flowRate"
-                            },
-                            "defaultDispenseFlowRate": {
-                                "$ref": "#/definitions/flowRate"
-                            },
-                            "defaultBlowOutFlowRate": {
-                                "$ref": "#/definitions/flowRate"
-                            },
-                            "defaultFlowAcceleration": {
-                                "$ref": "#/definitions/positiveNumber"
-                            },
-                            "defaultTipLength": {
-                                "$ref": "#/definitions/positiveNumber"
-                            },
-                            "defaultReturnTipHeight": {
-                                "$ref": "#/definitions/positiveNumber"
-                            },
-                            "aspirate": {
-                                "type": "array",
-                                "items": { "$ref": "#/definitions/liquidHandlingSpecs" }
-                            },
-                            "dispense": {
-                                "type": "array",
-                                "items": { "$ref": "#/definitions/liquidHandlingSpecs" }
-                            }
-                        }
-                    }
-                }
-            }
-        },
-        "defaultTipOverlapDictionary": {
-            "type": "object",
-            "description": "Map of tip overlap values with defaults",
-            "required": ["default"],
-            "$comment": "Other keys in here should be labware URIs",
-            "properties": {
-                "default": { "type": "number" }
-            },
-            "additionalProperties": { "type": "number" }
-        },
-        "maxVolume": { "$ref": "#/definitions/positiveNumber" },
-        "minVolume": { "$ref": "#/definitions/positiveNumber" },
-        "defaultTipracks": {
-            "type": "array",
-            "items": {
-                "type": "string"
-            }
-        }
-    }
-}

package/lib/pipette/schemas/2/pipettePropertiesSchema.json

@@ -1,287 +0,0 @@
-{
-    "$schema": "http://json-schema.org/draft-07/schema#",
-    "$id": "opentronsPipettePropertiesSchemaV2",
-    "definitions": {
-        "channels": {
-            "enum": [1, 8, 96, 384]
-        },
-        "displayCategory": {
-            "type": "string",
-            "enum": ["GEN1", "GEN2", "FLEX"]
-        },
-        "positiveNumber": {
-            "type": "number",
-            "minimum": 0
-        },
-        "currentRange": {
-            "type": "number",
-            "minimum": 0.01,
-            "maximum": 2.5
-        },
-        "editConfigurations": {
-            "type": "object",
-            "description": "Object allowing you to modify a config",
-            "required": ["value"],
-            "properties": {
-                "value": { "type": ["number", "array"] },
-                "min": { "type": "number" },
-                "max": { "type": "number" },
-                "units": { "type": "string" },
-                "type": { "type": "string" },
-                "displayName": { "type": "string" }
-            }
-        },
-        "partialTipCount": {
-            "type": "number",
-            "enum": [1, 2, 3, 4, 5, 6, 7, 8, 12, 96, 384]
-        },
-        "currentByTipCount": {
-            "type": "object",
-            "patternProperties": {
-                "\\d+": { "$ref": "#/definitions/currentRange" }
-            }
-        }
-    },
-    "description": "Version-level pipette specifications, which may vary across different versions of the same pipette",
-    "type": "object",
-    "required": [
-        "$otSharedSchema",
-        "pickUpTipConfigurations",
-        "dropTipConfigurations",
-        "partialTipConfigurations",
-        "plungerPositionsConfigurations",
-        "plungerMotorConfigurations",
-        "displayCategory",
-        "channels",
-        "model",
-        "displayName",
-        "backCompatNames"
-    ],
-    "properties": {
-        "additionalProperties": false,
-        "$otSharedSchema": {
-            "type": "string",
-            "description": "The path to a valid Opentrons shared schema relative to the shared-data directory, without its extension. For instance, #/pipette/schemas/2/pipettePropertiesSchema.json is a reference to this schema."
-        },
-        "backCompatNames": {
-            "type": "array",
-            "description": "Array of pipette names that are compatible with the given pipette",
-            "items": { "type": "string" }
-        },
-        "quirks": {
-            "type": "array",
-            "description": "Array of pipette quirks supported on the current pipette",
-            "items": { "type": "string" }
-        },
-        "channels": { "$ref": "#/definitions/channels" },
-        "partialTipConfigurations": {
-            "description": "Object containing information on partial tip configurations",
-            "oneof": [
-                {
-                    "type": "object",
-                    "required": ["partialTipSupported"],
-                    "properties": {
-                        "partialTipSupported": { "const": false },
-                        "availableConfigurations": null
-                    }
-                },
-                {
-                    "type": "object",
-                    "required": ["partialTipSupported", "availableConfigurations"],
-                    "properties": {
-                        "partialTipSupported": { "const": true },
-                        "availableConfigurations": {
-                            "type": "array",
-                            "description": "Array of available configurations",
-                            "items": { "$ref": "#/definitions/partialTipCount" }
-                        }
-                    }
-                }
-            ]
-        },
-        "availableSensors": {
-            "type": "object",
-            "description": "object with keyed by sensor and number available",
-            "required": ["sensors"],
-            "properties": {
-                "sensors": {
-                    "type": "array",
-                    "description": "Array of available sensor types",
-                    "items": {
-                        "type": "string"
-                    }
-                },
-                "patternProperties": {
-                    "description": "The count of each sensor type available on a given pipette model.",
-                    "type": "object",
-                    ".*": {
-                        "required": ["count"],
-                        "count": { "type": "integer" }
-                    }
-                }
-            }
-        },
-        "plungerPositionsConfigurations": {
-            "type": "object",
-            "description": "Key positions of the plunger, by liquid configuration",
-            "required": ["default"],
-            "patternProperties": {
-                "\\w+": {
-                    "type": "object",
-                    "description": "Plunger positions for this liquid configuration",
-                    "required": ["top", "bottom", "blowout", "drop"],
-                    "properties": {
-                        "top": { "type": "number" },
-                        "bottom": { "type": "number" },
-                        "blowout": { "type": "number" },
-                        "drop": { "type": "number" }
-                    }
-                }
-            }
-        },
-        "plungerMotorConfigurations": {
-            "type": "object",
-            "description": "Object containing configurations specific to the plunger motor",
-            "required": ["idle", "run"],
-            "properties": {
-                "idle": { "$ref": "#/definitions/currentRange" },
-                "run": { "$ref": "#/definitions/currentRange" }
-            }
-        },
-        "gearMotorConfigurations": {
-            "type": "object",
-            "description": "Object containing configurations specific to the clamp motors, if applicable",
-            "required": ["idle", "run"],
-            "properties": {
-                "idle": { "$ref": "#/definitions/currentRange" },
-                "run": { "$ref": "#/definitions/currentRange" }
-            }
-        },
-        "pickUpTipConfigurations": {
-            "description": "Object containing configurations for picking up tips common to all partial configurations",
-            "anyOf": [
-                {
-                    "type": "object",
-                    "required": ["pressFit"],
-                    "properties": {
-                        "pressFit": {
-                            "type": "object",
-                            "required": [
-                                "presses",
-                                "speed",
-                                "increment",
-                                "distance",
-                                "currentByTipCount"
-                            ],
-                            "additionalProperties": false,
-                            "properties": {
-                                "presses": { "$ref": "#/definitions/positiveNumber" },
-                                "speed": { "$ref": "#/definitions/positiveNumber" },
-                                "increment": { "$ref": "#/definitions/positiveNumber" },
-                                "distance": { "$ref": "#/definitions/positiveNumber" },
-                                "currentByTipCount": {
-                                    "$ref": "#/definitions/currentByTipCount"
-                                }
-                            }
-                        }
-                    }
-                },
-                {
-                    "type": "object",
-                    "required": ["camAction"],
-                    "properties": {
-                        "camAction": {
-                            "type": "object",
-                            "required": [
-                                "prep_move_distance",
-                                "prep_move_speed",
-                                "speed",
-                                "distance",
-                                "currentByTipCount"
-                            ],
-                            "additionalProperties": false,
-                            "properties": {
-                                "prep_move_distance": {
-                                    "$ref": "#/definitions/positiveNumber"
-                                },
-                                "prep_move_speed": { "$ref": "#/definitions/positiveNumber" },
-                                "speed": { "$ref": "#/definitions/positiveNumber" },
-                                "distance": { "$ref": "#/definitions/positiveNumber" },
-                                "currentByTipCount": {
-                                    "$ref": "#/definitions/currentByTipCount"
-                                },
-                                "connectTiprackDistanceMM": {
-                                    "$ref": "#/definitions/positiveNumber"
-                                }
-                            }
-                        }
-                    }
-                }
-            ]
-        },
-        "dropTipConfigurations": {
-            "type": "object",
-            "description": "Object containing configurations specific to dropping tips",
-            "anyOf": [
-                {
-                    "type": "object",
-                    "required": ["plungerEject"],
-                    "properties": {
-                        "plungerEject": {
-                            "type": "object",
-                            "required": ["current", "speed"],
-                            "additionalProperties": false,
-                            "properties": {
-                                "current": { "$ref": "#/definitions/currentRange" },
-                                "speed": { "$ref": "#/definitions/positiveNumber" }
-                            }
-                        }
-                    }
-                },
-                {
-                    "type": "object",
-                    "required": ["camAction"],
-                    "properties": {
-                        "camAction": {
-                            "type": "object",
-                            "required": [
-                                "current",
-                                "prep_move_distance",
-                                "prep_move_speed",
-                                "distance",
-                                "speed"
-                            ],
-                            "additionalProperties": false,
-                            "properties": {
-                                "current": { "$ref": "#/definitions/currentRange" },
-                                "prep_move_distance": {
-                                    "$ref": "#/definitions/positiveNumber"
-                                },
-                                "prep_move_speed": { "$ref": "#/definitions/positiveNumber" },
-                                "distance": { "$ref": "#/definitions/positiveNumber" },
-                                "speed": { "$ref": "#/definitions/positiveNumber" }
-                            }
-                        }
-                    }
-                }
-            ]
-        },
-        "displayName": {
-            "type": "string",
-            "description": "Display name of the pipette include model and generation number in readable format."
-        },
-        "tipPresenceCheckDistanceMM": {
-            "$ref": "#/definitions/positiveNumber",
-            "description": "The distance to move the gear motors down to check tip presence status."
-        },
-        "endTipActionRetractDistanceMM": {
-            "$ref": "#/definitions/positiveNumber",
-            "description": "The distance to move the z stage up after a tip pickup or dropoff."
-        },
-        "model": {
-            "type": "string",
-            "description": "the model of the pipette, for example an eightChannel pipette"
-        },
-        "displayCategory": { "$ref": "#/definitions/displayCategory" }
-    }
-}

package/lib/protocol/fixtures/1/simple.json

@@ -1,73 +0,0 @@
-{
-    "protocol-schema": "1.0.0",
-    "default-values": {
-        "aspirate-flow-rate": {
-            "p300_single_v1": 101
-        },
-        "dispense-flow-rate": {
-            "p300_single_v1": 102
-        },
-        "aspirate-mm-from-bottom": 0,
-        "dispense-mm-from-bottom": 0
-    },
-    "metadata": {
-        "protocol-name": "Simple test protocol v1",
-        "author": "engineering <engineering@opentrons.com>",
-        "description": "A short test protocol",
-        "created": 1223131231,
-        "last-modified": null,
-        "category": null,
-        "subcategory": null,
-        "tags": ["unitTest"]
-    },
-    "robot": {
-        "model": "OT-2 Standard"
-    },
-    "labware": {
-        "sourcePlateId": {
-            "slot": "10",
-            "model": "96-flat"
-        },
-        "destPlateId": {
-            "slot": "11",
-            "model": "96-flat"
-        }
-    },
-    "pipettes": {
-        "pipetteId": {
-            "mount": "left",
-            "model": "p300_single_v1"
-        }
-    },
-    "procedure": [
-        {
-            "subprocedure": [
-                {
-                    "command": "aspirate",
-                    "params": {
-                        "pipette": "pipetteId",
-                        "labware": "sourcePlateId",
-                        "well": "A1",
-                        "volume": 5,
-                        "flow-rate": 123
-                    }
-                },
-                {
-                    "command": "delay",
-                    "params": {
-                        "wait": 42
-                    }
-                },
-                {
-                    "command": "dispense",
-                    "params": {
-                        "pipette": "pipetteId",
-                        "labware": "destPlateId",
-                        "well": "B1",
-                        "volume": 4.5
-                    }
-                }
-            ]
-        }
-    ]
-}