@ninebix/nmt-system 1.0.0

package/dist/core/chunk-engine.js

@@ -0,0 +1,192 @@
+/**
+ * Chunk Engine - Data segmentation and reassembly
+ * @module core/chunk-engine
+ */
+import { hash } from '../utils/hash.js';
+/** Default chunk size: 4KB */
+const DEFAULT_CHUNK_SIZE = 4096;
+/** Default overlap between chunks */
+const DEFAULT_OVERLAP = 256;
+/** CDC minimum chunk size */
+const CDC_MIN_CHUNK = 2048;
+/** CDC maximum chunk size */
+const CDC_MAX_CHUNK = 65536;
+/** Rabin fingerprint polynomial */
+const RABIN_POLYNOMIAL = 0x3da3358b4dc173n;
+/** Rabin fingerprint mask for boundary detection */
+const RABIN_MASK = 0x1fffn;
+/** Rabin window size */
+const RABIN_WINDOW = 48;
+/**
+ * ChunkEngine class for data segmentation
+ */
+export class ChunkEngine {
+    options;
+    constructor(options = {}) {
+        this.options = {
+            chunkSize: options.chunkSize ?? DEFAULT_CHUNK_SIZE,
+            overlap: options.overlap ?? DEFAULT_OVERLAP,
+            useCDC: options.useCDC ?? false,
+            minChunkSize: options.minChunkSize ?? CDC_MIN_CHUNK,
+            maxChunkSize: options.maxChunkSize ?? CDC_MAX_CHUNK
+        };
+    }
+    /**
+     * Chunk data using the configured method
+     * @param data - Data to chunk
+     * @returns Array of chunks
+     */
+    chunk(data) {
+        if (this.options.useCDC) {
+            return this.cdcChunk(data);
+        }
+        return this.fixedChunk(data);
+    }
+    /**
+     * Fixed-size chunking
+     * @param data - Data to chunk
+     * @param size - Chunk size (default from options)
+     * @returns Array of chunks
+     */
+    fixedChunk(data, size) {
+        const chunkSize = size ?? this.options.chunkSize;
+        const chunks = [];
+        for (let offset = 0; offset < data.length; offset += chunkSize) {
+            const end = Math.min(offset + chunkSize, data.length);
+            const chunkData = data.subarray(offset, end);
+            chunks.push({
+                index: chunks.length,
+                offset,
+                data: Buffer.from(chunkData),
+                hash: hash(chunkData)
+            });
+        }
+        return chunks;
+    }
+    /**
+     * Content-Defined Chunking using Rabin fingerprints
+     * @param data - Data to chunk
+     * @returns Array of variable-size chunks
+     */
+    cdcChunk(data) {
+        const chunks = [];
+        const { minChunkSize, maxChunkSize } = this.options;
+        let fingerprint = 0n;
+        let chunkStart = 0;
+        for (let i = 0; i < data.length; i++) {
+            // Update fingerprint with rolling hash
+            fingerprint = this.updateFingerprint(fingerprint, data[i]);
+            const chunkLength = i - chunkStart + 1;
+            // Check boundary conditions
+            const isBoundary = (fingerprint & RABIN_MASK) === 0n;
+            const meetsMinSize = chunkLength >= minChunkSize;
+            const exceedsMaxSize = chunkLength >= maxChunkSize;
+            const isEndOfData = i === data.length - 1;
+            if ((isBoundary && meetsMinSize) || exceedsMaxSize || isEndOfData) {
+                const chunkData = data.subarray(chunkStart, i + 1);
+                chunks.push({
+                    index: chunks.length,
+                    offset: chunkStart,
+                    data: Buffer.from(chunkData),
+                    hash: hash(chunkData),
+                    fingerprint: Number(fingerprint & 0xffffffffn)
+                });
+                chunkStart = i + 1;
+                fingerprint = 0n;
+            }
+        }
+        return chunks;
+    }
+    /**
+     * Update Rabin fingerprint with new byte
+     */
+    updateFingerprint(fingerprint, byte) {
+        return ((fingerprint << 1n) ^ BigInt(byte)) % RABIN_POLYNOMIAL;
+    }
+    /**
+     * Merge chunks back into original data
+     * @param chunks - Array of chunks in order
+     * @returns Merged buffer
+     */
+    merge(chunks) {
+        // Sort by index to ensure correct order
+        const sorted = [...chunks].sort((a, b) => a.index - b.index);
+        // Calculate total size
+        const totalSize = sorted.reduce((sum, c) => sum + c.data.length, 0);
+        const result = Buffer.allocUnsafe(totalSize);
+        let position = 0;
+        for (const chunk of sorted) {
+            chunk.data.copy(result, position);
+            position += chunk.data.length;
+        }
+        return result;
+    }
+    /**
+     * Verify chunk integrity
+     * @param chunk - Chunk to verify
+     * @returns true if hash matches
+     */
+    verifyChunk(chunk) {
+        return hash(chunk.data) === chunk.hash;
+    }
+    /**
+     * Verify all chunks in array
+     * @param chunks - Chunks to verify
+     * @returns true if all hashes match
+     */
+    verifyAllChunks(chunks) {
+        return chunks.every(chunk => this.verifyChunk(chunk));
+    }
+    /**
+     * Find duplicate chunks by hash
+     * @param chunks - Chunks to deduplicate
+     * @returns Deduplication result
+     */
+    deduplicate(chunks) {
+        const hashToIndices = new Map();
+        const unique = [];
+        let savedBytes = 0;
+        for (const chunk of chunks) {
+            const indices = hashToIndices.get(chunk.hash);
+            if (indices) {
+                indices.push(chunk.index);
+                savedBytes += chunk.data.length;
+            }
+            else {
+                hashToIndices.set(chunk.hash, [chunk.index]);
+                unique.push(chunk);
+            }
+        }
+        const duplicates = new Map();
+        for (const [h, indices] of hashToIndices) {
+            if (indices.length > 1) {
+                duplicates.set(h, indices);
+            }
+        }
+        return { unique, duplicates, savedBytes };
+    }
+    /**
+     * Get chunk statistics
+     */
+    getStats(chunks) {
+        if (chunks.length === 0) {
+            return { count: 0, totalSize: 0, avgSize: 0, minSize: 0, maxSize: 0 };
+        }
+        const sizes = chunks.map(c => c.data.length);
+        const totalSize = sizes.reduce((a, b) => a + b, 0);
+        return {
+            count: chunks.length,
+            totalSize,
+            avgSize: Math.round(totalSize / chunks.length),
+            minSize: Math.min(...sizes),
+            maxSize: Math.max(...sizes)
+        };
+    }
+}
+/**
+ * Create a ChunkEngine instance with default options
+ */
+export function createChunkEngine(options) {
+    return new ChunkEngine(options);
+}
+//# sourceMappingURL=chunk-engine.js.map

package/dist/core/chunk-engine.js.map

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package/dist/core/dynamic-embedding.d.ts

@@ -0,0 +1,327 @@
+/**
+ * Dynamic Embedding System - Infinite Dimension Expansion
+ *
+ * Based on Probabilistic Ontology Framework:
+ * - Embeddings are not fixed at 384 dimensions
+ * - New concepts can expand the embedding space
+ * - Dimensions are semantic, not arbitrary
+ *
+ * @module core/dynamic-embedding
+ */
+import type { UUID } from '../types/index.js';
+/**
+ * Dynamic embedding that can grow
+ */
+export interface DynamicEmbedding {
+    id: UUID;
+    dimensions: Map<string, number>;
+    baseDimension: number;
+    createdAt: string;
+    expandedAt?: string;
+}
+/**
+ * Dimension metadata
+ */
+export interface DimensionInfo {
+    name: string;
+    description: string;
+    createdAt: string;
+    sourceNeuronId?: UUID;
+    semanticCategory: string;
+    usageCount: number;
+}
+/**
+ * Embedding expansion result
+ */
+export interface ExpansionResult {
+    originalDimensions: number;
+    newDimensions: number;
+    addedDimensions: string[];
+    reason: string;
+}
+/**
+ * Dynamic Embedding Manager Options
+ */
+export interface DynamicEmbeddingOptions {
+    baseDimension?: number;
+    maxDimensions?: number;
+    expansionThreshold?: number;
+    enableAutoExpansion?: boolean;
+}
+/**
+ * Dynamic Embedding Manager - Infinite Dimension Expansion
+ *
+ * Manages embeddings that can dynamically expand when new concepts
+ * cannot be adequately represented in current dimensions. This enables
+ * the system to grow its semantic space organically.
+ *
+ * Key Concepts:
+ * - **Base Dimensions**: Initial 384 dimensions covering standard semantics
+ * - **Dimension Expansion**: New dimensions added for novel concepts
+ * - **Semantic Categories**: Dimensions organized by type (semantic, syntactic, etc.)
+ * - **Auto-Expansion**: System automatically expands when similarity is too low
+ *
+ * @example
+ * ```typescript
+ * const manager = new DynamicEmbeddingManager({
+ *   baseDimension: 384,
+ *   maxDimensions: 10000,
+ *   enableAutoExpansion: true
+ * });
+ *
+ * // Create dynamic embedding from fixed array
+ * const dynEmb = manager.createFromFixed('emb-1', fixedEmbedding);
+ *
+ * // Auto-expand for new concept
+ * const expansion = manager.autoExpand(dynEmb, 'quantum computing applications');
+ * if (expansion) {
+ *   console.log(`Added ${expansion.addedDimensions.length} dimensions`);
+ * }
+ *
+ * // Calculate similarity between dynamic embeddings
+ * const sim = manager.similarity(dynEmbA, dynEmbB);
+ *
+ * // Get dimensions by category
+ * const semanticDims = manager.getDimensionsByCategory('semantic');
+ * ```
+ *
+ * @see {@link DynamicEmbedding} for embedding structure
+ * @see {@link DimensionInfo} for dimension metadata
+ */
+export declare class DynamicEmbeddingManager {
+    private baseDimension;
+    private maxDimensions;
+    private expansionThreshold;
+    private autoExpansion;
+    private dimensionRegistry;
+    private dimensionOrder;
+    private embeddings;
+    private semanticCategories;
+    constructor(options?: DynamicEmbeddingOptions);
+    /**
+     * Create a dynamic embedding from a fixed-size array.
+     *
+     * Maps each element of the fixed array to a named dimension,
+     * enabling future expansion while maintaining compatibility
+     * with standard embedding operations.
+     *
+     * @param id - Unique identifier for the embedding
+     * @param fixedEmbedding - Standard fixed-size Float32Array embedding
+     * @returns New DynamicEmbedding with named dimensions
+     *
+     * @example
+     * ```typescript
+     * const fixed = new Float32Array(384).fill(0.1);
+     * const dynamic = manager.createFromFixed('my-embedding', fixed);
+     * console.log(`Dimensions: ${dynamic.dimensions.size}`);
+     * ```
+     */
+    createFromFixed(id: UUID, fixedEmbedding: Float32Array): DynamicEmbedding;
+    /**
+     * Convert dynamic embedding to fixed-size array.
+     *
+     * Projects the dynamic embedding back to a fixed-size array,
+     * useful for compatibility with standard ML operations.
+     *
+     * @param embedding - The dynamic embedding to convert
+     * @param targetSize - Optional target size (defaults to current dimension count)
+     * @returns Fixed-size Float32Array embedding
+     *
+     * @example
+     * ```typescript
+     * const fixed = manager.toFixed(dynamicEmbedding, 384);
+     * // Use with standard similarity functions
+     * const sim = cosineSimilarity(fixed, otherFixed);
+     * ```
+     */
+    toFixed(embedding: DynamicEmbedding, targetSize?: number): Float32Array;
+    /**
+     * Expand embedding with new dimensions.
+     *
+     * Manually adds new dimensions to an embedding. Use this when
+     * you need explicit control over dimension expansion. For
+     * automatic expansion, use {@link autoExpand} instead.
+     *
+     * @param embedding - The embedding to expand
+     * @param newDimensions - Map of dimension names to values
+     * @param reason - Human-readable reason for expansion
+     * @returns Expansion result with statistics
+     *
+     * @example
+     * ```typescript
+     * const result = manager.expandEmbedding(
+     *   myEmbedding,
+     *   new Map([['quantum_coherence', 0.8], ['superposition', 0.6]]),
+     *   'Quantum computing concepts'
+     * );
+     * console.log(`Added: ${result.addedDimensions.join(', ')}`);
+     * ```
+     */
+    expandEmbedding(embedding: DynamicEmbedding, newDimensions: Map<string, number>, reason: string): ExpansionResult;
+    /**
+     * Check if embedding needs expansion for a concept
+     */
+    needsExpansion(embedding: DynamicEmbedding, conceptVector: Float32Array, similarityThreshold?: number): boolean;
+    /**
+     * Auto-expand embedding based on concept requirements.
+     *
+     * Automatically extracts semantic dimensions from a concept
+     * description and adds them to the embedding. Respects the
+     * maximum dimension limit.
+     *
+     * @param embedding - The embedding to expand
+     * @param conceptDescription - Text describing the new concept
+     * @param conceptVector - Optional vector representing the concept
+     * @returns Expansion result, or null if disabled/at limit
+     *
+     * @example
+     * ```typescript
+     * const result = manager.autoExpand(
+     *   embedding,
+     *   'Machine learning optimization techniques including gradient descent and backpropagation'
+     * );
+     *
+     * if (result) {
+     *   console.log(`Now have ${result.newDimensions} dimensions`);
+     * }
+     * ```
+     */
+    autoExpand(embedding: DynamicEmbedding, conceptDescription: string, conceptVector?: Float32Array): ExpansionResult | null;
+    /**
+     * Register a new dimension.
+     *
+     * Adds a new dimension to the global registry. Each dimension
+     * has metadata including semantic category and usage tracking.
+     *
+     * @param name - Unique dimension name
+     * @param info - Dimension metadata including category and description
+     *
+     * @example
+     * ```typescript
+     * manager.registerDimension('temporal_causality', {
+     *   name: 'temporal_causality',
+     *   description: 'Cause-effect relationships over time',
+     *   createdAt: new Date().toISOString(),
+     *   semanticCategory: 'causal',
+     *   usageCount: 0
+     * });
+     * ```
+     */
+    registerDimension(name: string, info: DimensionInfo): void;
+    /**
+     * Get dimensions by semantic category
+     */
+    getDimensionsByCategory(category: string): string[];
+    /**
+     * Calculate similarity between two dynamic embeddings.
+     *
+     * Computes cosine similarity over the union of all dimensions.
+     * Missing dimensions in either embedding are treated as 0.
+     *
+     * @param a - First dynamic embedding
+     * @param b - Second dynamic embedding
+     * @returns Cosine similarity (-1 to 1)
+     *
+     * @example
+     * ```typescript
+     * const sim = manager.similarity(embeddingA, embeddingB);
+     * console.log(`Similarity: ${(sim * 100).toFixed(1)}%`);
+     * ```
+     */
+    similarity(a: DynamicEmbedding, b: DynamicEmbedding): number;
+    /**
+     * Project embedding to a subspace of specific dimensions
+     */
+    project(embedding: DynamicEmbedding, dimensionNames: string[]): Map<string, number>;
+    /**
+     * Get the current total dimension count
+     */
+    getCurrentDimensionCount(): number;
+    /**
+     * Get embedding by ID
+     */
+    getEmbedding(id: UUID): DynamicEmbedding | undefined;
+    /**
+     * Get statistics
+     */
+    getStats(): {
+        totalDimensions: number;
+        baseDimensions: number;
+        expandedDimensions: number;
+        categories: number;
+        embeddings: number;
+    };
+    /**
+     * Serialize dimension registry for persistence.
+     *
+     * Converts the dimension registry, order, and categories to
+     * a JSON-serializable format.
+     *
+     * @returns Serialized dimension state
+     * @see {@link loadDimensions} for restoring state
+     */
+    serializeDimensions(): object;
+    /**
+     * Load dimension registry from serialized data
+     */
+    loadDimensions(data: {
+        order: string[];
+        registry: Record<string, DimensionInfo>;
+        categories: Record<string, string[]>;
+    }): void;
+    /**
+     * Serialize all embeddings for persistence.
+     *
+     * Converts all stored embeddings to a JSON-serializable format.
+     * Dimension Maps are converted to plain objects.
+     *
+     * @returns Serialized embeddings array
+     * @see {@link loadEmbeddings} for restoring state
+     */
+    serializeEmbeddings(): object;
+    /**
+     * Load embeddings from serialized data
+     */
+    loadEmbeddings(data: {
+        embeddings: Array<{
+            id: string;
+            dimensions: Record<string, number>;
+            baseDimension: number;
+            createdAt: string;
+            expandedAt?: string;
+        }>;
+    }): void;
+    /**
+     * Serialize complete state (dimensions + embeddings).
+     *
+     * Convenience method that serializes both the dimension registry
+     * and all stored embeddings in a single call.
+     *
+     * @returns Complete serialized state
+     * @see {@link loadAll} for restoring state
+     */
+    serializeAll(): object;
+    /**
+     * Load complete state (dimensions + embeddings)
+     */
+    loadAll(data: {
+        dimensions: {
+            order: string[];
+            registry: Record<string, DimensionInfo>;
+            categories: Record<string, string[]>;
+        };
+        embeddings: {
+            embeddings: Array<any>;
+        };
+    }): void;
+    private initializeBaseDimensions;
+    private inferCategory;
+    private extractSemanticDimensions;
+    private extractKeywords;
+    private calculateKeywordImportance;
+}
+/**
+ * Create a DynamicEmbeddingManager instance
+ */
+export declare function createDynamicEmbeddingManager(options?: DynamicEmbeddingOptions): DynamicEmbeddingManager;
+//# sourceMappingURL=dynamic-embedding.d.ts.map

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