@ninebix/nmt-system 1.0.0

package/dist/core/bidirectional-inference.js

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+/**
+ * Bidirectional Inference Engine - Forward and Backward (Abductive) Reasoning
+ *
+ * Based on Probabilistic Ontology Framework:
+ * - Forward Inference: A → B (cause → effect)
+ * - Backward Inference: B → A (effect → cause, abduction)
+ * - Bidirectional: A ↔ B (full causal chain)
+ *
+ * @module core/bidirectional-inference
+ */
+import { cosineSimilarity } from '../utils/similarity.js';
+import { getMetrics, MetricNames } from '../utils/metrics.js';
+/**
+ * Bidirectional Inference Engine
+ *
+ * Implements forward inference (A→B) and backward inference (B→A abduction)
+ * based on probabilistic ontology principles.
+ */
+export class BidirectionalInferenceEngine {
+    store;
+    graphManager;
+    maxDepth;
+    minConfidence;
+    enableAbduction;
+    decayFactor;
+    // Causal knowledge base
+    causalRelations = new Map();
+    abductionCache = new Map();
+    constructor(options) {
+        this.store = options.neuronStore;
+        this.graphManager = options.graphManager;
+        this.maxDepth = options.maxInferenceDepth ?? 5;
+        this.minConfidence = options.minConfidenceThreshold ?? 0.3;
+        this.enableAbduction = options.enableAbduction ?? true;
+        this.decayFactor = options.causalDecayFactor ?? 0.85;
+    }
+    /**
+     * Perform inference from source to find related concepts
+     * @param sourceId - Starting neuron ID
+     * @param direction - Inference direction
+     * @param targetHint - Optional target embedding for guided search
+     */
+    async infer(sourceId, direction = 'bidirectional', targetHint) {
+        const metrics = getMetrics();
+        const timer = metrics.startTimer(MetricNames.INFERENCE_DURATION_MS, { direction });
+        metrics.increment(MetricNames.INFERENCE_REQUESTS, { direction });
+        const source = await this.store.getNeuron(sourceId);
+        if (!source) {
+            timer();
+            return [];
+        }
+        const results = [];
+        switch (direction) {
+            case 'forward':
+                results.push(...await this.forwardInfer(source, targetHint));
+                break;
+            case 'backward':
+                results.push(...await this.backwardInfer(source, targetHint));
+                break;
+            case 'bidirectional':
+                results.push(...await this.forwardInfer(source, targetHint));
+                results.push(...await this.backwardInfer(source, targetHint));
+                break;
+        }
+        // Sort by confidence
+        results.sort((a, b) => b.confidence - a.confidence);
+        timer();
+        return results;
+    }
+    /**
+     * Forward Inference: A → B (cause → effect)
+     * "Given A, what effects/consequences follow?"
+     */
+    async forwardInfer(source, targetHint) {
+        const results = [];
+        const visited = new Set();
+        visited.add(source.id);
+        // Get outgoing causal/semantic connections
+        const outgoing = await this.store.getOutgoingSynapses(source.id);
+        for (const synapse of outgoing) {
+            if (visited.has(synapse.targetId))
+                continue;
+            const target = await this.store.getNeuron(synapse.targetId);
+            if (!target)
+                continue;
+            // Calculate confidence based on synapse weight and type
+            let confidence = synapse.weight;
+            // Boost confidence for CAUSAL type
+            if (synapse.type === 'CAUSAL') {
+                confidence *= 1.2;
+            }
+            // If target hint provided, adjust confidence based on similarity
+            if (targetHint) {
+                const similarity = cosineSimilarity(target.embedding, targetHint);
+                confidence *= (0.5 + similarity * 0.5);
+            }
+            if (confidence >= this.minConfidence) {
+                results.push({
+                    direction: 'forward',
+                    source,
+                    target,
+                    path: [{
+                            from: source.id,
+                            to: target.id,
+                            relation: synapse.type,
+                            weight: synapse.weight,
+                            direction: 'forward',
+                            reasoning: `Direct ${synapse.type.toLowerCase()} connection`
+                        }],
+                    confidence: Math.min(1, confidence),
+                    explanation: this.generateForwardExplanation(source, target, synapse),
+                    timestamp: new Date().toISOString()
+                });
+            }
+            visited.add(synapse.targetId);
+        }
+        // Multi-hop forward inference
+        if (this.maxDepth > 1) {
+            const multiHopResults = await this.multiHopForward(source, visited, 1, targetHint);
+            results.push(...multiHopResults);
+        }
+        return results;
+    }
+    /**
+     * Backward Inference (Abduction): B → A (effect → cause)
+     * "Given B (observation), what could have caused it?"
+     */
+    async backwardInfer(observation, targetHint) {
+        if (!this.enableAbduction) {
+            return [];
+        }
+        const results = [];
+        const visited = new Set();
+        visited.add(observation.id);
+        // Get incoming connections (things that point to this neuron)
+        const incoming = await this.store.getIncomingSynapses(observation.id);
+        for (const synapse of incoming) {
+            if (visited.has(synapse.sourceId))
+                continue;
+            const cause = await this.store.getNeuron(synapse.sourceId);
+            if (!cause)
+                continue;
+            // Calculate abductive confidence
+            // Backward inference typically has lower confidence than forward
+            let confidence = synapse.weight * 0.8;
+            // CAUSAL synapses are more reliable for abduction
+            if (synapse.type === 'CAUSAL') {
+                confidence *= 1.3;
+            }
+            // TEMPORAL synapses suggest temporal causation
+            if (synapse.type === 'TEMPORAL') {
+                confidence *= 1.1;
+            }
+            // If target hint provided, adjust confidence
+            if (targetHint) {
+                const similarity = cosineSimilarity(cause.embedding, targetHint);
+                confidence *= (0.5 + similarity * 0.5);
+            }
+            if (confidence >= this.minConfidence) {
+                const hypothesis = {
+                    observation: observation.id,
+                    hypothesis: cause.id,
+                    plausibility: confidence,
+                    supportingEvidence: [synapse.id],
+                    contradictingEvidence: [],
+                    explanation: this.generateAbductionExplanation(observation, cause, synapse)
+                };
+                // Cache the hypothesis
+                this.cacheHypothesis(observation.id, hypothesis);
+                results.push({
+                    direction: 'backward',
+                    source: observation,
+                    target: cause,
+                    path: [{
+                            from: observation.id,
+                            to: cause.id,
+                            relation: synapse.type,
+                            weight: synapse.weight,
+                            direction: 'backward',
+                            reasoning: `Abductive inference from ${synapse.type.toLowerCase()} relation`
+                        }],
+                    confidence: Math.min(1, confidence),
+                    explanation: hypothesis.explanation,
+                    timestamp: new Date().toISOString()
+                });
+            }
+            visited.add(synapse.sourceId);
+        }
+        // Multi-hop backward inference
+        if (this.maxDepth > 1) {
+            const multiHopResults = await this.multiHopBackward(observation, visited, 1, targetHint);
+            results.push(...multiHopResults);
+        }
+        return results;
+    }
+    /**
+     * Find causal chain between two concepts
+     * @param fromId - Starting concept
+     * @param toId - Target concept
+     */
+    async findCausalChain(fromId, toId) {
+        const from = await this.store.getNeuron(fromId);
+        const to = await this.store.getNeuron(toId);
+        if (!from || !to)
+            return null;
+        // BFS to find shortest causal path
+        const queue = [
+            { id: fromId, path: [] }
+        ];
+        const visited = new Set();
+        visited.add(fromId);
+        while (queue.length > 0) {
+            const { id, path } = queue.shift();
+            if (id === toId) {
+                return path;
+            }
+            if (path.length >= this.maxDepth)
+                continue;
+            // Try forward direction
+            const outgoing = await this.store.getOutgoingSynapses(id);
+            for (const synapse of outgoing) {
+                if (visited.has(synapse.targetId))
+                    continue;
+                visited.add(synapse.targetId);
+                const newPath = {
+                    from: id,
+                    to: synapse.targetId,
+                    relation: synapse.type,
+                    weight: synapse.weight,
+                    direction: 'forward',
+                    reasoning: `Forward via ${synapse.type}`
+                };
+                queue.push({
+                    id: synapse.targetId,
+                    path: [...path, newPath]
+                });
+            }
+            // Try backward direction (for bidirectional search)
+            const incoming = await this.store.getIncomingSynapses(id);
+            for (const synapse of incoming) {
+                if (visited.has(synapse.sourceId))
+                    continue;
+                visited.add(synapse.sourceId);
+                const newPath = {
+                    from: id,
+                    to: synapse.sourceId,
+                    relation: synapse.type,
+                    weight: synapse.weight,
+                    direction: 'backward',
+                    reasoning: `Backward via ${synapse.type}`
+                };
+                queue.push({
+                    id: synapse.sourceId,
+                    path: [...path, newPath]
+                });
+            }
+        }
+        return null;
+    }
+    /**
+     * Register a causal relation for learning
+     */
+    registerCausalRelation(causeId, effectId, strength, evidence = []) {
+        const key = `${causeId}:${effectId}`;
+        const existing = this.causalRelations.get(key);
+        if (existing) {
+            // Update existing relation
+            existing.strength = (existing.strength + strength) / 2;
+            existing.evidence.push(...evidence);
+            existing.activations++;
+        }
+        else {
+            // Create new relation
+            this.causalRelations.set(key, {
+                cause: causeId,
+                effect: effectId,
+                strength,
+                evidence,
+                reversible: false,
+                createdAt: new Date().toISOString(),
+                activations: 1
+            });
+        }
+    }
+    /**
+     * Get abduction hypotheses for an observation
+     */
+    getHypotheses(observationId) {
+        return this.abductionCache.get(observationId) ?? [];
+    }
+    /**
+     * Validate a hypothesis by checking supporting evidence
+     */
+    async validateHypothesis(hypothesis) {
+        let supportScore = 0;
+        let contradictScore = 0;
+        // Check supporting evidence
+        for (const evidenceId of hypothesis.supportingEvidence) {
+            const synapse = await this.store.getSynapse(evidenceId);
+            if (synapse) {
+                supportScore += synapse.weight;
+            }
+        }
+        // Check contradicting evidence
+        for (const evidenceId of hypothesis.contradictingEvidence) {
+            const synapse = await this.store.getSynapse(evidenceId);
+            if (synapse) {
+                contradictScore += synapse.weight;
+            }
+        }
+        // Calculate validation score
+        const total = supportScore + contradictScore;
+        if (total === 0)
+            return hypothesis.plausibility;
+        return (supportScore / total) * hypothesis.plausibility;
+    }
+    /**
+     * Get inference statistics
+     */
+    getStats() {
+        let totalStrength = 0;
+        for (const relation of this.causalRelations.values()) {
+            totalStrength += relation.strength;
+        }
+        let totalHypotheses = 0;
+        for (const hypotheses of this.abductionCache.values()) {
+            totalHypotheses += hypotheses.length;
+        }
+        return {
+            causalRelations: this.causalRelations.size,
+            cachedHypotheses: totalHypotheses,
+            averageCausalStrength: this.causalRelations.size > 0
+                ? totalStrength / this.causalRelations.size
+                : 0
+        };
+    }
+    // ==================== Private Methods ====================
+    async multiHopForward(source, visited, depth, targetHint) {
+        if (depth >= this.maxDepth)
+            return [];
+        const results = [];
+        const outgoing = await this.store.getOutgoingSynapses(source.id);
+        for (const synapse of outgoing) {
+            if (visited.has(synapse.targetId))
+                continue;
+            const intermediate = await this.store.getNeuron(synapse.targetId);
+            if (!intermediate)
+                continue;
+            visited.add(synapse.targetId);
+            // Get next hop connections
+            const nextOutgoing = await this.store.getOutgoingSynapses(intermediate.id);
+            for (const nextSynapse of nextOutgoing) {
+                if (visited.has(nextSynapse.targetId))
+                    continue;
+                const target = await this.store.getNeuron(nextSynapse.targetId);
+                if (!target)
+                    continue;
+                // Calculate multi-hop confidence with decay
+                let confidence = synapse.weight * nextSynapse.weight * Math.pow(this.decayFactor, depth);
+                if (targetHint) {
+                    const similarity = cosineSimilarity(target.embedding, targetHint);
+                    confidence *= (0.5 + similarity * 0.5);
+                }
+                if (confidence >= this.minConfidence) {
+                    results.push({
+                        direction: 'forward',
+                        source,
+                        target,
+                        path: [
+                            {
+                                from: source.id,
+                                to: intermediate.id,
+                                relation: synapse.type,
+                                weight: synapse.weight,
+                                direction: 'forward',
+                                reasoning: `Hop ${depth}: ${synapse.type}`
+                            },
+                            {
+                                from: intermediate.id,
+                                to: target.id,
+                                relation: nextSynapse.type,
+                                weight: nextSynapse.weight,
+                                direction: 'forward',
+                                reasoning: `Hop ${depth + 1}: ${nextSynapse.type}`
+                            }
+                        ],
+                        confidence: Math.min(1, confidence),
+                        explanation: `Multi-hop forward inference through ${depth + 1} connections`,
+                        timestamp: new Date().toISOString()
+                    });
+                }
+                visited.add(nextSynapse.targetId);
+            }
+        }
+        return results;
+    }
+    async multiHopBackward(observation, visited, depth, targetHint) {
+        if (depth >= this.maxDepth)
+            return [];
+        const results = [];
+        const incoming = await this.store.getIncomingSynapses(observation.id);
+        for (const synapse of incoming) {
+            if (visited.has(synapse.sourceId))
+                continue;
+            const intermediate = await this.store.getNeuron(synapse.sourceId);
+            if (!intermediate)
+                continue;
+            visited.add(synapse.sourceId);
+            // Get previous hop connections
+            const prevIncoming = await this.store.getIncomingSynapses(intermediate.id);
+            for (const prevSynapse of prevIncoming) {
+                if (visited.has(prevSynapse.sourceId))
+                    continue;
+                const cause = await this.store.getNeuron(prevSynapse.sourceId);
+                if (!cause)
+                    continue;
+                // Calculate multi-hop abductive confidence with higher decay
+                let confidence = synapse.weight * prevSynapse.weight * Math.pow(this.decayFactor * 0.9, depth);
+                if (targetHint) {
+                    const similarity = cosineSimilarity(cause.embedding, targetHint);
+                    confidence *= (0.5 + similarity * 0.5);
+                }
+                if (confidence >= this.minConfidence) {
+                    results.push({
+                        direction: 'backward',
+                        source: observation,
+                        target: cause,
+                        path: [
+                            {
+                                from: observation.id,
+                                to: intermediate.id,
+                                relation: synapse.type,
+                                weight: synapse.weight,
+                                direction: 'backward',
+                                reasoning: `Abductive hop ${depth}: ${synapse.type}`
+                            },
+                            {
+                                from: intermediate.id,
+                                to: cause.id,
+                                relation: prevSynapse.type,
+                                weight: prevSynapse.weight,
+                                direction: 'backward',
+                                reasoning: `Abductive hop ${depth + 1}: ${prevSynapse.type}`
+                            }
+                        ],
+                        confidence: Math.min(1, confidence),
+                        explanation: `Multi-hop abductive inference: potential root cause ${depth + 1} steps back`,
+                        timestamp: new Date().toISOString()
+                    });
+                }
+                visited.add(prevSynapse.sourceId);
+            }
+        }
+        return results;
+    }
+    generateForwardExplanation(source, target, synapse) {
+        const sourceDesc = source.metadata.tags.length > 0
+            ? source.metadata.tags.join(', ')
+            : source.id.substring(0, 8);
+        const targetDesc = target.metadata.tags.length > 0
+            ? target.metadata.tags.join(', ')
+            : target.id.substring(0, 8);
+        switch (synapse.type) {
+            case 'CAUSAL':
+                return `[${sourceDesc}] causes [${targetDesc}] (strength: ${synapse.weight.toFixed(2)})`;
+            case 'TEMPORAL':
+                return `[${sourceDesc}] precedes [${targetDesc}] temporally`;
+            case 'SEMANTIC':
+                return `[${sourceDesc}] is semantically related to [${targetDesc}]`;
+            default:
+                return `[${sourceDesc}] → [${targetDesc}] via ${synapse.type}`;
+        }
+    }
+    generateAbductionExplanation(observation, cause, synapse) {
+        const obsDesc = observation.metadata.tags.length > 0
+            ? observation.metadata.tags.join(', ')
+            : observation.id.substring(0, 8);
+        const causeDesc = cause.metadata.tags.length > 0
+            ? cause.metadata.tags.join(', ')
+            : cause.id.substring(0, 8);
+        return `Hypothesis: [${causeDesc}] may have caused [${obsDesc}] ` +
+            `(plausibility: ${(synapse.weight * 0.8).toFixed(2)}, ` +
+            `based on ${synapse.type.toLowerCase()} relation)`;
+    }
+    cacheHypothesis(observationId, hypothesis) {
+        const existing = this.abductionCache.get(observationId) ?? [];
+        // Check for duplicate hypothesis
+        const isDuplicate = existing.some(h => h.hypothesis === hypothesis.hypothesis);
+        if (!isDuplicate) {
+            existing.push(hypothesis);
+            this.abductionCache.set(observationId, existing);
+        }
+    }
+}
+/**
+ * Create a BidirectionalInferenceEngine instance
+ */
+export function createBidirectionalInferenceEngine(options) {
+    return new BidirectionalInferenceEngine(options);
+}
+//# sourceMappingURL=bidirectional-inference.js.map

package/dist/core/bidirectional-inference.js.map

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package/dist/core/chunk-engine.d.ts

@@ -0,0 +1,78 @@
+/**
+ * Chunk Engine - Data segmentation and reassembly
+ * @module core/chunk-engine
+ */
+import type { Chunk, ChunkOptions } from '../types/index.js';
+/**
+ * ChunkEngine class for data segmentation
+ */
+export declare class ChunkEngine {
+    private options;
+    constructor(options?: ChunkOptions);
+    /**
+     * Chunk data using the configured method
+     * @param data - Data to chunk
+     * @returns Array of chunks
+     */
+    chunk(data: Buffer): Chunk[];
+    /**
+     * Fixed-size chunking
+     * @param data - Data to chunk
+     * @param size - Chunk size (default from options)
+     * @returns Array of chunks
+     */
+    fixedChunk(data: Buffer, size?: number): Chunk[];
+    /**
+     * Content-Defined Chunking using Rabin fingerprints
+     * @param data - Data to chunk
+     * @returns Array of variable-size chunks
+     */
+    cdcChunk(data: Buffer): Chunk[];
+    /**
+     * Update Rabin fingerprint with new byte
+     */
+    private updateFingerprint;
+    /**
+     * Merge chunks back into original data
+     * @param chunks - Array of chunks in order
+     * @returns Merged buffer
+     */
+    merge(chunks: Chunk[]): Buffer;
+    /**
+     * Verify chunk integrity
+     * @param chunk - Chunk to verify
+     * @returns true if hash matches
+     */
+    verifyChunk(chunk: Chunk): boolean;
+    /**
+     * Verify all chunks in array
+     * @param chunks - Chunks to verify
+     * @returns true if all hashes match
+     */
+    verifyAllChunks(chunks: Chunk[]): boolean;
+    /**
+     * Find duplicate chunks by hash
+     * @param chunks - Chunks to deduplicate
+     * @returns Deduplication result
+     */
+    deduplicate(chunks: Chunk[]): {
+        unique: Chunk[];
+        duplicates: Map<string, number[]>;
+        savedBytes: number;
+    };
+    /**
+     * Get chunk statistics
+     */
+    getStats(chunks: Chunk[]): {
+        count: number;
+        totalSize: number;
+        avgSize: number;
+        minSize: number;
+        maxSize: number;
+    };
+}
+/**
+ * Create a ChunkEngine instance with default options
+ */
+export declare function createChunkEngine(options?: ChunkOptions): ChunkEngine;
+//# sourceMappingURL=chunk-engine.d.ts.map

package/dist/core/chunk-engine.d.ts.map

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