@nfdi4plants/arctrl 3.2.3 → 3.3.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/ts/index.d.ts +44 -7
- package/dist/ts/index.d.ts.map +1 -1
- package/dist/ts/index.js +45 -8
- package/dist/ts/node_modules/@fable-org/fable-library-ts/Array.js +195 -92
- package/dist/ts/node_modules/@fable-org/fable-library-ts/Async.js +251 -30
- package/dist/ts/node_modules/@fable-org/fable-library-ts/AsyncBuilder.js +61 -11
- package/dist/ts/node_modules/@fable-org/fable-library-ts/BigInt.js +15 -5
- package/dist/ts/node_modules/@fable-org/fable-library-ts/BitConverter.js +139 -0
- package/dist/ts/node_modules/@fable-org/fable-library-ts/Date.js +1 -1
- package/dist/ts/node_modules/@fable-org/fable-library-ts/Decimal.js +68 -12
- package/dist/ts/node_modules/@fable-org/fable-library-ts/Double.js +24 -10
- package/dist/ts/node_modules/@fable-org/fable-library-ts/FSharp.Core.js +8 -2
- package/dist/ts/node_modules/@fable-org/fable-library-ts/Global.js +1 -1
- package/dist/ts/node_modules/@fable-org/fable-library-ts/Int32.js +11 -2
- package/dist/ts/node_modules/@fable-org/fable-library-ts/List.js +220 -155
- package/dist/ts/node_modules/@fable-org/fable-library-ts/Long.js +7 -2
- package/dist/ts/node_modules/@fable-org/fable-library-ts/Map.js +46 -39
- package/dist/ts/node_modules/@fable-org/fable-library-ts/MutableMap.js +75 -92
- package/dist/ts/node_modules/@fable-org/fable-library-ts/MutableSet.js +56 -76
- package/dist/ts/node_modules/@fable-org/fable-library-ts/NumberStyles.js +54 -0
- package/dist/ts/node_modules/@fable-org/fable-library-ts/Numeric.js +10 -5
- package/dist/ts/node_modules/@fable-org/fable-library-ts/Random.js +3 -4
- package/dist/ts/node_modules/@fable-org/fable-library-ts/Range.js +4 -3
- package/dist/ts/node_modules/@fable-org/fable-library-ts/RegExp.js +2 -2
- package/dist/ts/node_modules/@fable-org/fable-library-ts/Seq.js +128 -64
- package/dist/ts/node_modules/@fable-org/fable-library-ts/Seq2.js +4 -8
- package/dist/ts/node_modules/@fable-org/fable-library-ts/Set.js +64 -57
- package/dist/ts/node_modules/@fable-org/fable-library-ts/String.js +68 -21
- package/dist/ts/node_modules/@fable-org/fable-library-ts/System.Collections.Generic.js +3 -2
- package/dist/ts/node_modules/@fable-org/fable-library-ts/System.Text.js +2 -2
- package/dist/ts/node_modules/@fable-org/fable-library-ts/System.js +5 -5
- package/dist/ts/node_modules/@fable-org/fable-library-ts/Types.js +23 -12
- package/dist/ts/node_modules/@fable-org/fable-library-ts/Util.js +88 -49
- package/dist/ts/node_modules/@fable-org/fable-library-ts/lib/big.js +121 -74
- package/dist/ts/ts/ARC.d.ts +19 -2
- package/dist/ts/ts/ARC.d.ts.map +1 -1
- package/dist/ts/ts/ARC.js +128 -89
- package/dist/ts/ts/CWL/CWLKnownFieldNames.d.ts +0 -2
- package/dist/ts/ts/CWL/CWLKnownFieldNames.d.ts.map +1 -1
- package/dist/ts/ts/CWL/CWLKnownFieldNames.js +1 -7
- package/dist/ts/ts/CWL/CWLProcessingUnit.d.ts +46 -27
- package/dist/ts/ts/CWL/CWLProcessingUnit.d.ts.map +1 -1
- package/dist/ts/ts/CWL/CWLProcessingUnit.js +312 -123
- package/dist/ts/ts/CWL/CWLTypes.d.ts +481 -148
- package/dist/ts/ts/CWL/CWLTypes.d.ts.map +1 -1
- package/dist/ts/ts/CWL/CWLTypes.js +887 -201
- package/dist/ts/ts/CWL/Decode.d.ts +480 -211
- package/dist/ts/ts/CWL/Decode.d.ts.map +1 -1
- package/dist/ts/ts/CWL/Decode.js +3614 -2462
- package/dist/ts/ts/CWL/DynamicObjHelpers.d.ts +9 -0
- package/dist/ts/ts/CWL/DynamicObjHelpers.d.ts.map +1 -1
- package/dist/ts/ts/CWL/DynamicObjHelpers.js +55 -5
- package/dist/ts/ts/CWL/Encode.d.ts +225 -85
- package/dist/ts/ts/CWL/Encode.d.ts.map +1 -1
- package/dist/ts/ts/CWL/Encode.js +1858 -970
- package/dist/ts/ts/CWL/ExpressionToolDescription.d.ts +42 -28
- package/dist/ts/ts/CWL/ExpressionToolDescription.d.ts.map +1 -1
- package/dist/ts/ts/CWL/ExpressionToolDescription.js +34 -13
- package/dist/ts/ts/CWL/HashHelpers.d.ts +38 -0
- package/dist/ts/ts/CWL/HashHelpers.d.ts.map +1 -1
- package/dist/ts/ts/CWL/HashHelpers.js +255 -6
- package/dist/ts/ts/CWL/Inputs.d.ts +127 -56
- package/dist/ts/ts/CWL/Inputs.d.ts.map +1 -1
- package/dist/ts/ts/CWL/Inputs.js +107 -16
- package/dist/ts/ts/CWL/OperationDescription.d.ts +41 -21
- package/dist/ts/ts/CWL/OperationDescription.d.ts.map +1 -1
- package/dist/ts/ts/CWL/OperationDescription.js +35 -9
- package/dist/ts/ts/CWL/Outputs.d.ts +93 -42
- package/dist/ts/ts/CWL/Outputs.d.ts.map +1 -1
- package/dist/ts/ts/CWL/Outputs.js +101 -19
- package/dist/ts/ts/CWL/ParameterReference.d.ts +11 -8
- package/dist/ts/ts/CWL/ParameterReference.d.ts.map +1 -1
- package/dist/ts/ts/CWL/ParameterReference.js +18 -25
- package/dist/ts/ts/CWL/ParameterValue.d.ts +15 -1
- package/dist/ts/ts/CWL/ParameterValue.d.ts.map +1 -1
- package/dist/ts/ts/CWL/ParameterValue.js +59 -35
- package/dist/ts/ts/CWL/Requirements.d.ts +240 -98
- package/dist/ts/ts/CWL/Requirements.d.ts.map +1 -1
- package/dist/ts/ts/CWL/Requirements.js +462 -89
- package/dist/ts/ts/CWL/ScalarQuoting.d.ts +51 -0
- package/dist/ts/ts/CWL/ScalarQuoting.d.ts.map +1 -0
- package/dist/ts/ts/CWL/ScalarQuoting.js +250 -0
- package/dist/ts/ts/CWL/ToolDescription.d.ts +63 -50
- package/dist/ts/ts/CWL/ToolDescription.d.ts.map +1 -1
- package/dist/ts/ts/CWL/ToolDescription.js +34 -13
- package/dist/ts/ts/CWL/WorkflowDescription.d.ts +45 -26
- package/dist/ts/ts/CWL/WorkflowDescription.d.ts.map +1 -1
- package/dist/ts/ts/CWL/WorkflowDescription.js +38 -11
- package/dist/ts/ts/CWL/WorkflowSteps.d.ts +248 -65
- package/dist/ts/ts/CWL/WorkflowSteps.d.ts.map +1 -1
- package/dist/ts/ts/CWL/WorkflowSteps.js +413 -43
- package/dist/ts/ts/CWLRunResolver.d.ts +30 -12
- package/dist/ts/ts/CWLRunResolver.d.ts.map +1 -1
- package/dist/ts/ts/CWLRunResolver.js +221 -86
- package/dist/ts/ts/Contract/ARC.d.ts.map +1 -1
- package/dist/ts/ts/Contract/ARC.js +13 -14
- package/dist/ts/ts/Contract/ArcAssay.d.ts.map +1 -1
- package/dist/ts/ts/Contract/ArcAssay.js +4 -4
- package/dist/ts/ts/Contract/ArcInvestigation.d.ts.map +1 -1
- package/dist/ts/ts/Contract/ArcInvestigation.js +3 -4
- package/dist/ts/ts/Contract/ArcRun.d.ts +12 -2
- package/dist/ts/ts/Contract/ArcRun.d.ts.map +1 -1
- package/dist/ts/ts/Contract/ArcRun.js +47 -20
- package/dist/ts/ts/Contract/ArcStudy.d.ts.map +1 -1
- package/dist/ts/ts/Contract/ArcStudy.js +4 -4
- package/dist/ts/ts/Contract/ArcWorkflow.d.ts +18 -4
- package/dist/ts/ts/Contract/ArcWorkflow.d.ts.map +1 -1
- package/dist/ts/ts/Contract/ArcWorkflow.js +55 -17
- package/dist/ts/ts/Contract/Datamap.d.ts.map +1 -1
- package/dist/ts/ts/Contract/Datamap.js +16 -17
- package/dist/ts/ts/Contract/Git.js +1 -1
- package/dist/ts/ts/Contract/ValidationPackagesConfig.d.ts.map +1 -1
- package/dist/ts/ts/Contract/ValidationPackagesConfig.js +4 -5
- package/dist/ts/ts/ContractIO/ContractIO.d.ts.map +1 -1
- package/dist/ts/ts/ContractIO/ContractIO.js +15 -16
- package/dist/ts/ts/Conversion/Assay.d.ts.map +1 -1
- package/dist/ts/ts/Conversion/Assay.js +26 -18
- package/dist/ts/ts/Conversion/Basic.d.ts +4 -0
- package/dist/ts/ts/Conversion/Basic.d.ts.map +1 -1
- package/dist/ts/ts/Conversion/Basic.js +55 -31
- package/dist/ts/ts/Conversion/ColumnIndex.d.ts.map +1 -1
- package/dist/ts/ts/Conversion/ColumnIndex.js +2 -4
- package/dist/ts/ts/Conversion/DateTime.d.ts.map +1 -1
- package/dist/ts/ts/Conversion/DateTime.js +1 -2
- package/dist/ts/ts/Conversion/Investigation.js +11 -11
- package/dist/ts/ts/Conversion/Person.js +11 -11
- package/dist/ts/ts/Conversion/Process.d.ts.map +1 -1
- package/dist/ts/ts/Conversion/Process.js +107 -86
- package/dist/ts/ts/Conversion/Run.d.ts +36 -6
- package/dist/ts/ts/Conversion/Run.d.ts.map +1 -1
- package/dist/ts/ts/Conversion/Run.js +320 -136
- package/dist/ts/ts/Conversion/ScholarlyArticle.d.ts.map +1 -1
- package/dist/ts/ts/Conversion/ScholarlyArticle.js +75 -9
- package/dist/ts/ts/Conversion/Study.d.ts.map +1 -1
- package/dist/ts/ts/Conversion/Study.js +23 -12
- package/dist/ts/ts/Conversion/Table.js +5 -5
- package/dist/ts/ts/Conversion/Workflow.d.ts +48 -9
- package/dist/ts/ts/Conversion/Workflow.d.ts.map +1 -1
- package/dist/ts/ts/Conversion/Workflow.js +655 -163
- package/dist/ts/ts/Conversion.js +6 -6
- package/dist/ts/ts/Core/ArcTypes.d.ts +73 -28
- package/dist/ts/ts/Core/ArcTypes.d.ts.map +1 -1
- package/dist/ts/ts/Core/ArcTypes.js +219 -129
- package/dist/ts/ts/Core/Comment.d.ts.map +1 -1
- package/dist/ts/ts/Core/Comment.js +2 -2
- package/dist/ts/ts/Core/CommentList.js +7 -7
- package/dist/ts/ts/Core/Conversion.d.ts.map +1 -1
- package/dist/ts/ts/Core/Conversion.js +41 -41
- package/dist/ts/ts/Core/Data.d.ts.map +1 -1
- package/dist/ts/ts/Core/Data.js +14 -11
- package/dist/ts/ts/Core/DataContext.d.ts +1 -1
- package/dist/ts/ts/Core/DataContext.d.ts.map +1 -1
- package/dist/ts/ts/Core/DataContext.js +4 -4
- package/dist/ts/ts/Core/DataFile.d.ts +11 -8
- package/dist/ts/ts/Core/DataFile.d.ts.map +1 -1
- package/dist/ts/ts/Core/DataFile.js +55 -61
- package/dist/ts/ts/Core/Datamap.d.ts.map +1 -1
- package/dist/ts/ts/Core/Datamap.js +2 -3
- package/dist/ts/ts/Core/Helper/Collections.d.ts.map +1 -1
- package/dist/ts/ts/Core/Helper/Collections.js +2 -4
- package/dist/ts/ts/Core/Helper/Identifier.d.ts.map +1 -1
- package/dist/ts/ts/Core/Helper/Identifier.js +12 -15
- package/dist/ts/ts/Core/Helper/ORCID.d.ts.map +1 -1
- package/dist/ts/ts/Core/Helper/ORCID.js +2 -3
- package/dist/ts/ts/Core/Helper/Regex.d.ts.map +1 -1
- package/dist/ts/ts/Core/Helper/Regex.js +52 -53
- package/dist/ts/ts/Core/Helper/SemVer.d.ts +13 -3
- package/dist/ts/ts/Core/Helper/SemVer.d.ts.map +1 -1
- package/dist/ts/ts/Core/Helper/SemVer.js +96 -6
- package/dist/ts/ts/Core/Helper/Url.d.ts.map +1 -1
- package/dist/ts/ts/Core/Helper/Url.js +1 -1
- package/dist/ts/ts/Core/OntologyAnnotation.js +22 -22
- package/dist/ts/ts/Core/Person.d.ts.map +1 -1
- package/dist/ts/ts/Core/Person.js +2 -2
- package/dist/ts/ts/Core/Process/ColumnIndex.d.ts.map +1 -1
- package/dist/ts/ts/Core/Process/ColumnIndex.js +10 -12
- package/dist/ts/ts/Core/Process/Component.d.ts.map +1 -1
- package/dist/ts/ts/Core/Process/Component.js +22 -22
- package/dist/ts/ts/Core/Process/Factor.d.ts.map +1 -1
- package/dist/ts/ts/Core/Process/Factor.js +7 -7
- package/dist/ts/ts/Core/Process/FactorValue.d.ts.map +1 -1
- package/dist/ts/ts/Core/Process/FactorValue.js +15 -15
- package/dist/ts/ts/Core/Process/Material.d.ts.map +1 -1
- package/dist/ts/ts/Core/Process/Material.js +2 -2
- package/dist/ts/ts/Core/Process/MaterialAttribute.d.ts.map +1 -1
- package/dist/ts/ts/Core/Process/MaterialAttribute.js +6 -6
- package/dist/ts/ts/Core/Process/MaterialAttributeValue.d.ts.map +1 -1
- package/dist/ts/ts/Core/Process/MaterialAttributeValue.js +16 -16
- package/dist/ts/ts/Core/Process/Process.js +21 -21
- package/dist/ts/ts/Core/Process/ProcessInput.d.ts.map +1 -1
- package/dist/ts/ts/Core/Process/ProcessInput.js +2 -2
- package/dist/ts/ts/Core/Process/ProcessOutput.d.ts.map +1 -1
- package/dist/ts/ts/Core/Process/ProcessOutput.js +2 -2
- package/dist/ts/ts/Core/Process/ProcessParameterValue.d.ts.map +1 -1
- package/dist/ts/ts/Core/Process/ProcessParameterValue.js +17 -17
- package/dist/ts/ts/Core/Process/ProcessSequence.js +4 -4
- package/dist/ts/ts/Core/Process/Protocol.d.ts.map +1 -1
- package/dist/ts/ts/Core/Process/Protocol.js +9 -9
- package/dist/ts/ts/Core/Process/ProtocolParameter.d.ts.map +1 -1
- package/dist/ts/ts/Core/Process/ProtocolParameter.js +6 -6
- package/dist/ts/ts/Core/Publication.d.ts.map +1 -1
- package/dist/ts/ts/Core/Publication.js +3 -3
- package/dist/ts/ts/Core/ScalarValue.d.ts.map +1 -1
- package/dist/ts/ts/Core/ScalarValue.js +9 -13
- package/dist/ts/ts/Core/Table/ArcTable.d.ts.map +1 -1
- package/dist/ts/ts/Core/Table/ArcTable.js +18 -18
- package/dist/ts/ts/Core/Table/ArcTableAux.d.ts +1 -1
- package/dist/ts/ts/Core/Table/ArcTableAux.d.ts.map +1 -1
- package/dist/ts/ts/Core/Table/ArcTableAux.js +50 -70
- package/dist/ts/ts/Core/Table/ArcTables.js +16 -16
- package/dist/ts/ts/Core/Table/CompositeHeader.d.ts.map +1 -1
- package/dist/ts/ts/Core/Table/CompositeHeader.js +5 -6
- package/dist/ts/ts/Core/Templates.d.ts.map +1 -1
- package/dist/ts/ts/Core/Templates.js +2 -2
- package/dist/ts/ts/FileSystem/Path.d.ts +13 -2
- package/dist/ts/ts/FileSystem/Path.d.ts.map +1 -1
- package/dist/ts/ts/FileSystem/Path.js +37 -19
- package/dist/ts/ts/Json/Assay.js +22 -22
- package/dist/ts/ts/Json/Comment.js +9 -9
- package/dist/ts/ts/Json/Data.d.ts.map +1 -1
- package/dist/ts/ts/Json/Data.js +11 -11
- package/dist/ts/ts/Json/Datamap/DataContext.js +2 -2
- package/dist/ts/ts/Json/Decode.d.ts.map +1 -1
- package/dist/ts/ts/Json/Decode.js +3 -5
- package/dist/ts/ts/Json/Encode.js +2 -2
- package/dist/ts/ts/Json/Investigation.d.ts.map +1 -1
- package/dist/ts/ts/Json/Investigation.js +20 -20
- package/dist/ts/ts/Json/OntologyAnnotation.d.ts.map +1 -1
- package/dist/ts/ts/Json/OntologyAnnotation.js +18 -18
- package/dist/ts/ts/Json/OntologySourceReference.d.ts.map +1 -1
- package/dist/ts/ts/Json/OntologySourceReference.js +9 -9
- package/dist/ts/ts/Json/Person.d.ts.map +1 -1
- package/dist/ts/ts/Json/Person.js +20 -20
- package/dist/ts/ts/Json/Process/AssayMaterials.d.ts.map +1 -1
- package/dist/ts/ts/Json/Process/AssayMaterials.js +1 -2
- package/dist/ts/ts/Json/Process/Component.d.ts.map +1 -1
- package/dist/ts/ts/Json/Process/Component.js +5 -6
- package/dist/ts/ts/Json/Process/Factor.d.ts.map +1 -1
- package/dist/ts/ts/Json/Process/Factor.js +7 -7
- package/dist/ts/ts/Json/Process/FactorValue.d.ts.map +1 -1
- package/dist/ts/ts/Json/Process/FactorValue.js +2 -3
- package/dist/ts/ts/Json/Process/Material.d.ts.map +1 -1
- package/dist/ts/ts/Json/Process/Material.js +9 -10
- package/dist/ts/ts/Json/Process/MaterialAttribute.d.ts.map +1 -1
- package/dist/ts/ts/Json/Process/MaterialAttribute.js +5 -6
- package/dist/ts/ts/Json/Process/MaterialAttributeValue.d.ts.map +1 -1
- package/dist/ts/ts/Json/Process/MaterialAttributeValue.js +2 -3
- package/dist/ts/ts/Json/Process/Process.d.ts.map +1 -1
- package/dist/ts/ts/Json/Process/Process.js +8 -9
- package/dist/ts/ts/Json/Process/ProcessParameterValue.d.ts.map +1 -1
- package/dist/ts/ts/Json/Process/ProcessParameterValue.js +1 -2
- package/dist/ts/ts/Json/Process/Protocol.d.ts.map +1 -1
- package/dist/ts/ts/Json/Process/Protocol.js +17 -17
- package/dist/ts/ts/Json/Process/ProtocolParameter.d.ts.map +1 -1
- package/dist/ts/ts/Json/Process/ProtocolParameter.js +6 -6
- package/dist/ts/ts/Json/Process/Sample.d.ts.map +1 -1
- package/dist/ts/ts/Json/Process/Sample.js +9 -9
- package/dist/ts/ts/Json/Process/Source.d.ts.map +1 -1
- package/dist/ts/ts/Json/Process/Source.js +10 -11
- package/dist/ts/ts/Json/Process/StudyMaterials.d.ts.map +1 -1
- package/dist/ts/ts/Json/Process/StudyMaterials.js +1 -2
- package/dist/ts/ts/Json/PropertyValue.d.ts.map +1 -1
- package/dist/ts/ts/Json/PropertyValue.js +24 -24
- package/dist/ts/ts/Json/Publication.d.ts.map +1 -1
- package/dist/ts/ts/Json/Publication.js +10 -10
- package/dist/ts/ts/Json/ROCrate/LDContext.js +1 -2
- package/dist/ts/ts/Json/ROCrate/LDGraph.js +2 -2
- package/dist/ts/ts/Json/ROCrate/LDNode.js +5 -5
- package/dist/ts/ts/Json/Run.js +9 -9
- package/dist/ts/ts/Json/StringTable.d.ts.map +1 -1
- package/dist/ts/ts/Json/StringTable.js +4 -7
- package/dist/ts/ts/Json/Study.js +20 -20
- package/dist/ts/ts/Json/Table/CellTable.js +1 -2
- package/dist/ts/ts/Json/Table/OATable.js +1 -2
- package/dist/ts/ts/Json/Workflow.js +9 -9
- package/dist/ts/ts/Json.d.ts +121 -1
- package/dist/ts/ts/Json.d.ts.map +1 -1
- package/dist/ts/ts/Json.js +310 -2
- package/dist/ts/ts/JsonIO/Comment.d.ts +15 -0
- package/dist/ts/ts/JsonIO/Comment.d.ts.map +1 -0
- package/dist/ts/ts/JsonIO/Comment.js +67 -0
- package/dist/ts/ts/JsonIO/Data.d.ts +9 -0
- package/dist/ts/ts/JsonIO/Data.d.ts.map +1 -0
- package/dist/ts/ts/JsonIO/Data.js +49 -0
- package/dist/ts/ts/JsonIO/DataFile.d.ts +9 -0
- package/dist/ts/ts/JsonIO/DataFile.d.ts.map +1 -0
- package/dist/ts/ts/JsonIO/DataFile.js +48 -0
- package/dist/ts/ts/JsonIO/LDObject.d.ts +6 -0
- package/dist/ts/ts/JsonIO/LDObject.d.ts.map +1 -1
- package/dist/ts/ts/JsonIO/LDObject.js +173 -17
- package/dist/ts/ts/JsonIO/OntologySourceReference.d.ts +15 -0
- package/dist/ts/ts/JsonIO/OntologySourceReference.d.ts.map +1 -0
- package/dist/ts/ts/JsonIO/OntologySourceReference.js +67 -0
- package/dist/ts/ts/JsonIO/Publication.d.ts +15 -0
- package/dist/ts/ts/JsonIO/Publication.d.ts.map +1 -0
- package/dist/ts/ts/JsonIO/Publication.js +68 -0
- package/dist/ts/ts/JsonIO/Table/ArcTable.d.ts +9 -0
- package/dist/ts/ts/JsonIO/Table/ArcTable.d.ts.map +1 -0
- package/dist/ts/ts/JsonIO/Table/ArcTable.js +74 -0
- package/dist/ts/ts/JsonIO/Table/CompositeCell.d.ts +6 -0
- package/dist/ts/ts/JsonIO/Table/CompositeCell.d.ts.map +1 -0
- package/dist/ts/ts/JsonIO/Table/CompositeCell.js +29 -0
- package/dist/ts/ts/JsonIO/Table/CompositeHeader.d.ts +6 -0
- package/dist/ts/ts/JsonIO/Table/CompositeHeader.d.ts.map +1 -0
- package/dist/ts/ts/JsonIO/Table/CompositeHeader.js +29 -0
- package/dist/ts/ts/JsonIO/Table/IOType.d.ts +6 -0
- package/dist/ts/ts/JsonIO/Table/IOType.d.ts.map +1 -0
- package/dist/ts/ts/JsonIO/Table/IOType.js +29 -0
- package/dist/ts/ts/License.d.ts.map +1 -1
- package/dist/ts/ts/License.js +6 -6
- package/dist/ts/ts/ROCrate/LDContext.d.ts.map +1 -1
- package/dist/ts/ts/ROCrate/LDContext.js +31 -39
- package/dist/ts/ts/ROCrate/LDObject.d.ts.map +1 -1
- package/dist/ts/ts/ROCrate/LDObject.js +56 -49
- package/dist/ts/ts/ROCrate/LDTypes/Comment.js +2 -2
- package/dist/ts/ts/ROCrate/LDTypes/ComputationalWorkflow.js +3 -3
- package/dist/ts/ts/ROCrate/LDTypes/ComputerLanguage.js +2 -2
- package/dist/ts/ts/ROCrate/LDTypes/CreateAction.js +5 -5
- package/dist/ts/ts/ROCrate/LDTypes/CreativeWork.d.ts +1 -0
- package/dist/ts/ts/ROCrate/LDTypes/CreativeWork.d.ts.map +1 -1
- package/dist/ts/ts/ROCrate/LDTypes/CreativeWork.js +3 -0
- package/dist/ts/ts/ROCrate/LDTypes/Dataset.d.ts.map +1 -1
- package/dist/ts/ts/ROCrate/LDTypes/Dataset.js +22 -17
- package/dist/ts/ts/ROCrate/LDTypes/DefinedTerm.js +2 -2
- package/dist/ts/ts/ROCrate/LDTypes/File.js +5 -5
- package/dist/ts/ts/ROCrate/LDTypes/FormalParameter.js +2 -2
- package/dist/ts/ts/ROCrate/LDTypes/LabProcess.js +9 -9
- package/dist/ts/ts/ROCrate/LDTypes/LabProtocol.js +4 -4
- package/dist/ts/ts/ROCrate/LDTypes/Organization.js +1 -1
- package/dist/ts/ts/ROCrate/LDTypes/Person.js +7 -7
- package/dist/ts/ts/ROCrate/LDTypes/PostalAddress.js +1 -1
- package/dist/ts/ts/ROCrate/LDTypes/PropertyValue.d.ts +11 -0
- package/dist/ts/ts/ROCrate/LDTypes/PropertyValue.d.ts.map +1 -1
- package/dist/ts/ts/ROCrate/LDTypes/PropertyValue.js +61 -50
- package/dist/ts/ts/ROCrate/LDTypes/Sample.js +3 -3
- package/dist/ts/ts/ROCrate/LDTypes/ScholarlyArticle.js +4 -4
- package/dist/ts/ts/ROCrate/LDTypes/SoftwareSourceCode.js +3 -3
- package/dist/ts/ts/ROCrate/LDTypes/WorkflowInvocation.js +3 -3
- package/dist/ts/ts/ROCrate/LDTypes/WorkflowProtocol.js +2 -2
- package/dist/ts/ts/ROCrateIO.d.ts +18 -4
- package/dist/ts/ts/ROCrateIO.d.ts.map +1 -1
- package/dist/ts/ts/ROCrateIO.js +49 -38
- package/dist/ts/ts/Spreadsheet/AnnotationTable/ArcTable.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/AnnotationTable/ArcTable.js +9 -10
- package/dist/ts/ts/Spreadsheet/AnnotationTable/CompositeCell.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/AnnotationTable/CompositeCell.js +7 -7
- package/dist/ts/ts/Spreadsheet/AnnotationTable/CompositeColumn.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/AnnotationTable/CompositeColumn.js +6 -8
- package/dist/ts/ts/Spreadsheet/AnnotationTable/CompositeHeader.js +20 -20
- package/dist/ts/ts/Spreadsheet/ArcAssay.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/ArcAssay.js +7 -7
- package/dist/ts/ts/Spreadsheet/ArcInvestigation.js +8 -8
- package/dist/ts/ts/Spreadsheet/ArcRun.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/ArcRun.js +5 -6
- package/dist/ts/ts/Spreadsheet/ArcStudy.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/ArcStudy.js +3 -3
- package/dist/ts/ts/Spreadsheet/ArcWorkflow.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/ArcWorkflow.js +5 -6
- package/dist/ts/ts/Spreadsheet/CollectionAux.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/CollectionAux.js +10 -14
- package/dist/ts/ts/Spreadsheet/Datamap.js +1 -2
- package/dist/ts/ts/Spreadsheet/DatamapTable/DatamapColumn.js +3 -3
- package/dist/ts/ts/Spreadsheet/DatamapTable/DatamapHeader.js +10 -10
- package/dist/ts/ts/Spreadsheet/DatamapTable/DatamapTable.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/DatamapTable/DatamapTable.js +9 -10
- package/dist/ts/ts/Spreadsheet/Metadata/Assays.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/Metadata/Assays.js +6 -6
- package/dist/ts/ts/Spreadsheet/Metadata/Comment.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/Metadata/Comment.js +5 -5
- package/dist/ts/ts/Spreadsheet/Metadata/Contacts.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/Metadata/Contacts.js +2 -2
- package/dist/ts/ts/Spreadsheet/Metadata/Factors.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/Metadata/Factors.js +4 -4
- package/dist/ts/ts/Spreadsheet/Metadata/OntologyAnnotation.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/Metadata/OntologyAnnotation.js +3 -3
- package/dist/ts/ts/Spreadsheet/Metadata/Protocols.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/Metadata/Protocols.js +5 -5
- package/dist/ts/ts/Spreadsheet/Metadata/Publication.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/Metadata/Publication.js +4 -4
- package/dist/ts/ts/Spreadsheet/Metadata/Run.d.ts +1 -1
- package/dist/ts/ts/Spreadsheet/Metadata/Run.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/Metadata/Run.js +7 -7
- package/dist/ts/ts/Spreadsheet/Metadata/SparseTable.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/Metadata/SparseTable.js +17 -17
- package/dist/ts/ts/Spreadsheet/Metadata/Study.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/Metadata/Study.js +8 -8
- package/dist/ts/ts/Spreadsheet/Metadata/Workflow.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/Metadata/Workflow.js +5 -5
- package/dist/ts/ts/WorkflowGraph/Adapters.d.ts +1 -1
- package/dist/ts/ts/WorkflowGraph/Adapters.d.ts.map +1 -1
- package/dist/ts/ts/WorkflowGraph/Adapters.js +5 -6
- package/dist/ts/ts/WorkflowGraph/Builder.d.ts +25 -6
- package/dist/ts/ts/WorkflowGraph/Builder.d.ts.map +1 -1
- package/dist/ts/ts/WorkflowGraph/Builder.js +264 -138
- package/dist/ts/ts/WorkflowGraph/GraphTypes.d.ts +6 -0
- package/dist/ts/ts/WorkflowGraph/GraphTypes.d.ts.map +1 -1
- package/dist/ts/ts/WorkflowGraph/GraphTypes.js +4 -1
- package/dist/ts/ts/WorkflowGraph/ReferenceParsing.d.ts +8 -5
- package/dist/ts/ts/WorkflowGraph/ReferenceParsing.d.ts.map +1 -1
- package/dist/ts/ts/WorkflowGraph/ReferenceParsing.js +27 -10
- package/dist/ts/ts/Xlsx.js +3 -3
- package/dist/ts/ts/Yaml/ValidationPackage.d.ts +3 -3
- package/dist/ts/ts/Yaml/ValidationPackage.d.ts.map +1 -1
- package/dist/ts/ts/Yaml/ValidationPackage.js +11 -23
- package/dist/ts/ts/Yaml/ValidationPackagesConfig.d.ts +3 -3
- package/dist/ts/ts/Yaml/ValidationPackagesConfig.d.ts.map +1 -1
- package/dist/ts/ts/Yaml/ValidationPackagesConfig.js +11 -23
- package/dist/ts/ts/fable_modules/DynamicObj.8.0.0/DynamicObj.fs.js +16 -20
- package/dist/ts/ts/fable_modules/DynamicObj.8.0.0/FableJS.fs.js +1 -1
- package/dist/ts/ts/fable_modules/DynamicObj.8.0.0/ReflectionUtils.fs.js +8 -8
- package/dist/ts/ts/fable_modules/Fable.Promise.3.2.0/Promise.fs.js +1 -2
- package/dist/ts/ts/fable_modules/Fable.SimpleHttp.3.6.0/Http.fs.js +4 -4
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.1/Cells/FsCell.fs.js +8 -8
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.1/Cells/FsCellsCollection.fs.js +18 -18
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.1/FsAddress.fs.js +3 -3
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.1/FsWorkbook.fs.js +1 -1
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.1/FsWorksheet.fs.js +7 -7
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.1/Json/Value.fs.js +3 -5
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.1/Json/Worksheet.fs.js +7 -7
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.1/Ranges/FsRangeBase.fs.js +1 -2
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.1/Tables/FsTable.fs.js +7 -7
- package/dist/ts/ts/fable_modules/FsSpreadsheet.Js.7.0.1/Cell.fs.js +2 -2
- package/dist/ts/ts/fable_modules/FsSpreadsheet.Js.7.0.1/Table.fs.js +1 -2
- package/dist/ts/ts/fable_modules/Thoth.Json.Core.0.9.1/Decode.fs.js +49 -71
- package/dist/ts/ts/fable_modules/Thoth.Json.Core.0.9.1/Encode.fs.js +1 -1
- package/dist/ts/ts/fable_modules/Thoth.Json.JavaScript.0.5.0/Decode.fs.js +1 -2
- package/dist/ts/ts/fable_modules/YAMLicious.2.0.0/Compare.fs.js +857 -0
- package/dist/ts/ts/fable_modules/YAMLicious.2.0.0/CoreSchema.fs.js +725 -0
- package/dist/ts/ts/fable_modules/YAMLicious.2.0.0/Decode.fs.js +1175 -0
- package/dist/ts/ts/fable_modules/YAMLicious.2.0.0/Encode.fs.js +123 -0
- package/dist/ts/ts/fable_modules/YAMLicious.2.0.0/Layout.fs.js +282 -0
- package/dist/ts/ts/fable_modules/YAMLicious.2.0.0/Lexeme.fs.js +203 -0
- package/dist/ts/ts/fable_modules/YAMLicious.2.0.0/Lexer.fs.js +1502 -0
- package/dist/ts/ts/fable_modules/YAMLicious.2.0.0/Model.fs.js +564 -0
- package/dist/ts/ts/fable_modules/YAMLicious.2.0.0/Node.fs.js +453 -0
- package/dist/ts/ts/fable_modules/YAMLicious.2.0.0/Parser.fs.js +2622 -0
- package/dist/ts/ts/fable_modules/YAMLicious.2.0.0/Reader.fs.js +108 -0
- package/dist/ts/ts/fable_modules/YAMLicious.2.0.0/Source.fs.js +649 -0
- package/dist/ts/ts/fable_modules/YAMLicious.2.0.0/Tag.fs.js +32 -0
- package/dist/ts/ts/fable_modules/YAMLicious.2.0.0/Validate.fs.js +1084 -0
- package/dist/ts/ts/fable_modules/YAMLicious.2.0.0/Writer.fs.js +2927 -0
- package/package.json +5 -4
- package/dist/ts/ts/fable_modules/YAMLicious.1.0.0/Decode.fs.js +0 -1669
- package/dist/ts/ts/fable_modules/YAMLicious.1.0.0/Encode.fs.js +0 -57
- package/dist/ts/ts/fable_modules/YAMLicious.1.0.0/Escapes.fs.js +0 -320
- package/dist/ts/ts/fable_modules/YAMLicious.1.0.0/Interop/JsInterop.fs.js +0 -10
- package/dist/ts/ts/fable_modules/YAMLicious.1.0.0/Persil.fs.js +0 -414
- package/dist/ts/ts/fable_modules/YAMLicious.1.0.0/Preprocessing.fs.js +0 -319
- package/dist/ts/ts/fable_modules/YAMLicious.1.0.0/Reader.fs.js +0 -1884
- package/dist/ts/ts/fable_modules/YAMLicious.1.0.0/Regex.fs.js +0 -23
- package/dist/ts/ts/fable_modules/YAMLicious.1.0.0/RegexActivePatterns.fs.js +0 -313
- package/dist/ts/ts/fable_modules/YAMLicious.1.0.0/Syntax.fs.js +0 -840
- package/dist/ts/ts/fable_modules/YAMLicious.1.0.0/Writer.fs.js +0 -689
- package/dist/ts/ts/fable_modules/YAMLicious.1.0.0/YAMLiciousTypes.fs.js +0 -359
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const d = ActivePattern_dataFromFsCells((option_1 = tryFindIndex((s) => s.startsWith("Data Format"), cols), option_1 != null ? 1 +
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const d = ActivePattern_dataFromFsCells((option_1 = tryFindIndex((s) => s.startsWith("Data Format"), cols), option_1 != null ? 1 + option_1 : void 0), (option_3 = tryFindIndex((s_1) => s_1.startsWith("Data Selector Format"), cols), option_3 != null ? 1 + option_3 : void 0), cells_1);
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{"version":3,"file":"DatamapTable.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Spreadsheet/DatamapTable/DatamapTable.ts"],"names":[],"mappings":"AACA,OAAO,
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{"version":3,"file":"DatamapTable.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Spreadsheet/DatamapTable/DatamapTable.ts"],"names":[],"mappings":"AACA,OAAO,EAAiE,UAAU,EAAW,MAAM,qCAAqC,CAAC;AAEzI,OAAO,EAAE,QAAQ,EAAE,MAAM,wDAAwD,CAAC;AAElF,OAAO,EAAE,OAAO,EAAE,MAAM,8DAA8D,CAAC;AACvF,OAAO,EAAE,WAAW,EAAE,MAAM,2DAA2D,CAAC;AACxF,OAAO,EAAE,MAAM,EAAE,MAAM,uCAAuC,CAAC;AAE/D,OAAO,EAAE,WAAW,EAAE,MAAM,2BAA2B,CAAC;AAIxD,OAAO,EAAE,OAAO,EAAE,MAAM,uBAAuB,CAAC;AAQhD,eAAO,MAAM,mBAAmB,EAAE,UAAU,CAAC,MAAM,CAAgG,CAAC;AAEpJ,wBAAgB,oBAAoB,CAAC,OAAO,EAAE,UAAU,CAAC,QAAQ,CAAC,GAAG,UAAU,CAAC,UAAU,CAAC,QAAQ,CAAC,CAAC,CAKpG;AAED;;GAEG;AACH,wBAAgB,eAAe,CAAC,KAAK,EAAE,WAAW,GAAG,MAAM,CAAC,OAAO,CAAC,CAEnE;AAED;;GAEG;AACH,wBAAgB,cAAc,CAAC,OAAO,EAAE,QAAQ,CAAC,QAAQ,CAAC,GAAG,WAAW,EAAE,CAOzE;AAED;;GAEG;AACH,wBAAgB,kBAAkB,CAAC,KAAK,EAAE,WAAW,GAAG,MAAM,CAAC,OAAO,CAAC,CAgBtE;AAED,wBAAgB,aAAa,CAAC,KAAK,EAAE,OAAO,GAAG,WAAW,CAqCzD"}
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import { ofArray, exists, iterate, length,
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import { ofArray, exists, iterate, length, FSharpList__get_Head, iterateIndexed } from '../../../node_modules/@fable-org/fable-library-ts/List.js';
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import { value } from '../../../node_modules/@fable-org/fable-library-ts/Option.js';
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const t =
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const maxRow = length(
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const fsTable = ws.Table("datamapTable", new FsRangeAddress(new FsAddress(1, 1), new FsAddress(maxRow, maxCol)));
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const matchValue = Dictionary_tryGet(v, stringCount);
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value = v;
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-
const spaces =
|
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|
+
const spaces = matchValue;
|
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|
stringCount.set(v, spaces + " ");
|
|
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|
-
value
|
|
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|
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value = v + " " + spaces;
|
|
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|
}
|
|
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|
} else {
|
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value
|
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value = v;
|
|
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|
}
|
|
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|
const address = new FsAddress(rowI + 1, colI + 1);
|
|
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|
-
fsTable.Cell(address, ws.CellCollection).SetValueAs(value
|
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fsTable.Cell(address, ws.CellCollection).SetValueAs(value);
|
|
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|
}, col);
|
|
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}, columns);
|
|
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|
ws.RescanRows();
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"Assays.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Spreadsheet/Metadata/Assays.ts"],"names":[],"mappings":"AACA,OAAO,EAA4E,UAAU,EAAW,MAAM,qCAAqC,CAAC;AAEpJ,OAAO,EAAc,MAAM,
|
|
1
|
+
{"version":3,"file":"Assays.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Spreadsheet/Metadata/Assays.ts"],"names":[],"mappings":"AACA,OAAO,EAA4E,UAAU,EAAW,MAAM,qCAAqC,CAAC;AAEpJ,OAAO,EAAc,MAAM,EAAU,MAAM,uCAAuC,CAAC;AAInF,OAAO,EAAE,QAAQ,EAAE,MAAM,wBAAwB,CAAC;AAClD,OAAO,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,uBAAuB,CAAC;AACzD,OAAO,EAA6F,WAAW,EAAsH,MAAM,kBAAkB,CAAC;AAE9P,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAG7D,OAAO,EAAE,WAAW,EAAc,MAAM,qCAAqC,CAAC;AAE9E,eAAO,MAAM,MAAM,EAAE,UAAU,CAAC,MAAM,CAAwR,CAAC;AAE/T,wBAAgB,UAAU,CAAC,UAAU,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,KAAK,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,WAAW,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,eAAe,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,4BAA4B,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,kCAAkC,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,cAAc,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,2BAA2B,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,iCAAiC,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,kBAAkB,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,QAAQ,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,QAAQ,EAAE,QAAQ,EAAE,GAAG,QAAQ,CAsB1c;AAED,wBAAgB,eAAe,CAAC,MAAM,EAAE,WAAW,GAAG,UAAU,CAAC,QAAQ,CAAC,CAazE;AAED,wBAAgB,aAAa,CAAC,MAAM,EAAE,UAAU,CAAC,QAAQ,CAAC,GAAG,WAAW,CAiCvE;AAED,wBAAgB,QAAQ,CAAC,MAAM,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,UAAU,EAAE,KAAK,EAAE,IAAI,EAAE,WAAW,CAAC,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,CAAC,GAAG,CAAC,MAAM,CAAC,MAAM,CAAC,EAAE,KAAK,EAAE,UAAU,CAAC,MAAM,CAAC,EAAE,UAAU,CAAC,QAAQ,CAAC,CAAC,CAGnL;AAED,wBAAgB,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,MAAM,EAAE,UAAU,CAAC,QAAQ,CAAC,GAAG,QAAQ,CAAC,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,CAAC,CAEhH"}
|
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
import { ofArray, length, singleton, initialize, map, empty, iterateIndexed, cons, reverse } from '../../../node_modules/@fable-org/fable-library-ts/List.js';
|
|
2
2
|
import { OntologyAnnotation } from '../../Core/OntologyAnnotation.js';
|
|
3
|
-
import { unwrap,
|
|
3
|
+
import { unwrap, defaultArg } from '../../../node_modules/@fable-org/fable-library-ts/Option.js';
|
|
4
4
|
import { createMissingIdentifier, Assay_tryIdentifierFromFileName, removeMissingIdentifier, Assay_fileNameFromIdentifier } from '../../Core/Helper/Identifier.js';
|
|
5
5
|
import { Option_fromValueWithDefault, ResizeArray_iter } from '../../Core/Helper/Collections.js';
|
|
6
6
|
import { JsonTypes_decomposeTechnologyPlatform, JsonTypes_composeTechnologyPlatform } from '../../Core/Conversion.js';
|
|
@@ -20,17 +20,17 @@ function fromString(identifier, title, description, measurementType, measurement
|
|
|
20
20
|
if (fileName == null) {
|
|
21
21
|
identifier_4 = createMissingIdentifier();
|
|
22
22
|
} else {
|
|
23
|
-
const matchValue = Assay_tryIdentifierFromFileName(
|
|
24
|
-
identifier_4 = matchValue != null ?
|
|
23
|
+
const matchValue = Assay_tryIdentifierFromFileName(fileName);
|
|
24
|
+
identifier_4 = matchValue != null ? matchValue : createMissingIdentifier();
|
|
25
25
|
}
|
|
26
26
|
} else {
|
|
27
|
-
identifier_4 =
|
|
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|
+
identifier_4 = identifier;
|
|
28
28
|
}
|
|
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29
|
const measurementType_2 = Option_fromValueWithDefault(new OntologyAnnotation(), measurementType_1);
|
|
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30
|
const technologyType_2 = Option_fromValueWithDefault(new OntologyAnnotation(), technologyType_1);
|
|
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31
|
let technologyPlatform_1;
|
|
32
32
|
const option_1 = technologyPlatform;
|
|
33
|
-
technologyPlatform_1 = option_1 != null ? JsonTypes_decomposeTechnologyPlatform(
|
|
33
|
+
technologyPlatform_1 = option_1 != null ? JsonTypes_decomposeTechnologyPlatform(option_1) : void 0;
|
|
34
34
|
return ArcAssay.make(identifier_4, title, description, measurementType_2, technologyType_2, technologyPlatform_1, [], void 0, [], comments);
|
|
35
35
|
}
|
|
36
36
|
function fromSparseTable(matrix) {
|
|
@@ -68,7 +68,7 @@ function toSparseTable(assays) {
|
|
|
68
68
|
addToDict(matrix.Matrix, ["Technology Type", i_1], tt_1.TermName);
|
|
69
69
|
addToDict(matrix.Matrix, ["Technology Type Term Accession Number", i_1], tt_1.TermAccessionNumber);
|
|
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|
addToDict(matrix.Matrix, ["Technology Type Term Source REF", i_1], tt_1.TermSourceREF);
|
|
71
|
-
addToDict(matrix.Matrix, ["Technology Platform", i_1], defaultArg((option_1 = a.TechnologyPlatform, option_1 != null ? JsonTypes_composeTechnologyPlatform(
|
|
71
|
+
addToDict(matrix.Matrix, ["Technology Platform", i_1], defaultArg((option_1 = a.TechnologyPlatform, option_1 != null ? JsonTypes_composeTechnologyPlatform(option_1) : void 0), ""));
|
|
72
72
|
addToDict(matrix.Matrix, ["File Name", i_1], processedFileName);
|
|
73
73
|
ResizeArray_iter((comment) => {
|
|
74
74
|
const n = Comment_addToMatrix(i_1, comment, matrix.Matrix);
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"Comment.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Spreadsheet/Metadata/Comment.ts"],"names":[],"mappings":"AAGA,OAAO,
|
|
1
|
+
{"version":3,"file":"Comment.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Spreadsheet/Metadata/Comment.ts"],"names":[],"mappings":"AAGA,OAAO,EAAc,MAAM,EAAE,MAAM,uCAAuC,CAAC;AAE3E,OAAO,EAAE,QAAQ,EAAE,MAAM,uBAAuB,CAAC;AACjD,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAE7D,OAAO,EAAE,IAAI,EAAE,MAAM,qCAAqC,CAAC;AAE3D,eAAO,MAAM,uBAAuB,iBAAiB,CAAC;AAEtD,eAAO,MAAM,sBAAsB,EAAE,MAA0E,CAAC;AAEhH,eAAO,MAAM,qCAAqC,EAAE,MAAwE,CAAC;AAE7H,wBAAgB,+BAA+B,CAAC,GAAG,EAAE,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC,CAsB3E;AAED,wBAAgB,sBAAsB,CAAC,CAAC,EAAE,MAAM,GAAG,MAAM,CAExD;AAED,wBAAgB,kBAAkB,CAAC,CAAC,EAAE,MAAM,EAAE,CAAC,EAAE,MAAM,GAAG,QAAQ,CAIjE;AAED,wBAAgB,gBAAgB,CAAC,CAAC,EAAE,QAAQ,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,CAE9D;AAED;;;;GAIG;AACH,wBAAgB,mBAAmB,CAAC,CAAC,EAAE,KAAK,EAAE,CAAC,EAAE,QAAQ,EAAE,MAAM,EAAE,IAAI,CAAC,CAAC,MAAM,EAAE,KAAK,CAAC,EAAE,MAAM,CAAC,GAAG,MAAM,CASxG;AAED,eAAO,MAAM,qBAAqB,gBAAgB,CAAC;AAEnD,eAAO,MAAM,oBAAoB,EAAE,MAAsD,CAAC;AAE1F,wBAAgB,6BAA6B,CAAC,GAAG,EAAE,MAAM,CAAC,MAAM,CAAC,GAAG,MAAM,CAAC,MAAM,CAAC,CAgBjF;AAED,wBAAgB,iBAAiB,CAAC,CAAC,EAAE,MAAM,GAAG,MAAM,CAEnD"}
|
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
import { concat, toText, printf, toFail } from '../../../node_modules/@fable-org/fable-library-ts/String.js';
|
|
2
2
|
import { ActivePatterns_$007CRegex$007C_$007C } from '../../Core/Helper/Regex.js';
|
|
3
|
-
import {
|
|
3
|
+
import { defaultArg } from '../../../node_modules/@fable-org/fable-library-ts/Option.js';
|
|
4
4
|
import { Option_fromValueWithDefault } from './Conversions.js';
|
|
5
5
|
import { Comment$ } from '../../Core/Comment.js';
|
|
6
6
|
import { addToDict } from '../../../node_modules/@fable-org/fable-library-ts/MapUtil.js';
|
|
@@ -11,12 +11,12 @@ const Comment_commentPatternNoAngleBrackets = concat("Comment\\s*\\[(?<", Commen
|
|
|
11
11
|
function Comment_$007CComment$007C_$007C(key) {
|
|
12
12
|
const activePatternResult = ActivePatterns_$007CRegex$007C_$007C(Comment_commentPattern, key);
|
|
13
13
|
if (activePatternResult != null) {
|
|
14
|
-
const r =
|
|
14
|
+
const r = activePatternResult;
|
|
15
15
|
return r.groups && r.groups[Comment_commentValueKey] || "";
|
|
16
16
|
} else {
|
|
17
17
|
const activePatternResult_1 = ActivePatterns_$007CRegex$007C_$007C(Comment_commentPatternNoAngleBrackets, key);
|
|
18
18
|
if (activePatternResult_1 != null) {
|
|
19
|
-
const r_1 =
|
|
19
|
+
const r_1 = activePatternResult_1;
|
|
20
20
|
const v = r_1.groups && r_1.groups[Comment_commentValueKey] || "";
|
|
21
21
|
if (v === "<>") {
|
|
22
22
|
return void 0;
|
|
@@ -54,10 +54,10 @@ const Remark_remarkPattern = concat("#(?<", Remark_remarkValueKey, ">.+)");
|
|
|
54
54
|
function Remark_$007CRemark$007C_$007C(key) {
|
|
55
55
|
const option_1 = key;
|
|
56
56
|
if (option_1 != null) {
|
|
57
|
-
const k =
|
|
57
|
+
const k = option_1;
|
|
58
58
|
const activePatternResult = ActivePatterns_$007CRegex$007C_$007C(Remark_remarkPattern, k);
|
|
59
59
|
if (activePatternResult != null) {
|
|
60
|
-
const r =
|
|
60
|
+
const r = activePatternResult;
|
|
61
61
|
return r.groups && r.groups[Remark_remarkValueKey] || "";
|
|
62
62
|
} else {
|
|
63
63
|
return void 0;
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"Contacts.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Spreadsheet/Metadata/Contacts.ts"],"names":[],"mappings":"AACA,OAAO,EAA4E,UAAU,EAAW,MAAM,qCAAqC,CAAC;AAGpJ,OAAO,EAAE,MAAM,EAAE,MAAM,sBAAsB,CAAC;AAE9C,OAAO,
|
|
1
|
+
{"version":3,"file":"Contacts.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Spreadsheet/Metadata/Contacts.ts"],"names":[],"mappings":"AACA,OAAO,EAA4E,UAAU,EAAW,MAAM,qCAAqC,CAAC;AAGpJ,OAAO,EAAE,MAAM,EAAE,MAAM,sBAAsB,CAAC;AAE9C,OAAO,EAAsB,MAAM,EAAE,MAAM,uCAAuC,CAAC;AACnF,OAAO,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,uBAAuB,CAAC;AACzD,OAAO,EAA6F,WAAW,EAAsH,MAAM,kBAAkB,CAAC;AAE9P,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAI7D,OAAO,EAAE,WAAW,EAAc,MAAM,qCAAqC,CAAC;AAE9E,eAAO,MAAM,aAAa,cAAc,CAAC;AAEzC,eAAO,MAAM,cAAc,eAAe,CAAC;AAE3C,eAAO,MAAM,gBAAgB,iBAAiB,CAAC;AAE/C,eAAO,MAAM,UAAU,UAAU,CAAC;AAElC,eAAO,MAAM,UAAU,UAAU,CAAC;AAElC,eAAO,MAAM,QAAQ,QAAQ,CAAC;AAE9B,eAAO,MAAM,YAAY,YAAY,CAAC;AAEtC,eAAO,MAAM,gBAAgB,gBAAgB,CAAC;AAE9C,eAAO,MAAM,UAAU,UAAU,CAAC;AAElC,eAAO,MAAM,6BAA6B,gCAAgC,CAAC;AAE3E,eAAO,MAAM,uBAAuB,0BAA0B,CAAC;AAE/D,eAAO,MAAM,MAAM,EAAE,UAAU,CAAC,MAAM,CAAoM,CAAC;AAE3O,wBAAgB,UAAU,CAAC,QAAQ,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,SAAS,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,WAAW,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,KAAK,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,KAAK,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,GAAG,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,OAAO,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,WAAW,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,IAAI,EAAE,MAAM,EAAE,wBAAwB,EAAE,MAAM,EAAE,kBAAkB,EAAE,MAAM,EAAE,QAAQ,EAAE,QAAQ,EAAE,GAAG,MAAM,CAG9U;AAED,wBAAgB,eAAe,CAAC,MAAM,EAAE,WAAW,GAAG,UAAU,CAAC,MAAM,CAAC,CAcvE;AAED,wBAAgB,aAAa,CAAC,OAAO,EAAE,UAAU,CAAC,MAAM,CAAC,GAAG,WAAW,CA0BtE;AAED,wBAAgB,QAAQ,CAAC,MAAM,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,UAAU,EAAE,KAAK,EAAE,IAAI,EAAE,WAAW,CAAC,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,CAAC,GAAG,CAAC,MAAM,CAAC,MAAM,CAAC,EAAE,KAAK,EAAE,UAAU,CAAC,MAAM,CAAC,EAAE,UAAU,CAAC,MAAM,CAAC,CAAC,CAGjL;AAED,wBAAgB,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,OAAO,EAAE,UAAU,CAAC,MAAM,CAAC,GAAG,QAAQ,CAAC,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,CAAC,CAQ/G"}
|
|
@@ -2,7 +2,7 @@ import { ofArray, length, singleton, initialize, map, empty, iterateIndexed, con
|
|
|
2
2
|
import { Person_setOrcidFromComments, Person_setCommentFromORCID } from '../../Core/Conversion.js';
|
|
3
3
|
import { OntologyAnnotation_fromAggregatedStrings, OntologyAnnotation_toAggregatedStrings } from './Conversions.js';
|
|
4
4
|
import { Person } from '../../Core/Person.js';
|
|
5
|
-
import { defaultArg, unwrap
|
|
5
|
+
import { defaultArg, unwrap } from '../../../node_modules/@fable-org/fable-library-ts/Option.js';
|
|
6
6
|
import { SparseTable_GetEmptyComments_3ECCA699, SparseTable__TryGetValueDefault_5BAE6133, SparseTable__TryGetValue_11FD62A8, SparseTable_Create_Z2192E64B, SparseTable, SparseTable_FromRows_Z5579EC29, SparseTable_ToRows_759CAFC1 } from './SparseTable.js';
|
|
7
7
|
import { Comment_fromString, Comment_addToMatrix } from './Comment.js';
|
|
8
8
|
import { addToDict } from '../../../node_modules/@fable-org/fable-library-ts/MapUtil.js';
|
|
@@ -76,7 +76,7 @@ function toRows(prefix, persons) {
|
|
|
76
76
|
if (prefix == null) {
|
|
77
77
|
return SparseTable_ToRows_759CAFC1(m);
|
|
78
78
|
} else {
|
|
79
|
-
return SparseTable_ToRows_759CAFC1(m,
|
|
79
|
+
return SparseTable_ToRows_759CAFC1(m, prefix);
|
|
80
80
|
}
|
|
81
81
|
}
|
|
82
82
|
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"Factors.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Spreadsheet/Metadata/Factors.ts"],"names":[],"mappings":"AACA,OAAO,EAA4E,UAAU,EAAW,MAAM,qCAAqC,CAAC;AAEpJ,OAAO,
|
|
1
|
+
{"version":3,"file":"Factors.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Spreadsheet/Metadata/Factors.ts"],"names":[],"mappings":"AACA,OAAO,EAA4E,UAAU,EAAW,MAAM,qCAAqC,CAAC;AAEpJ,OAAO,EAAc,MAAM,EAAU,MAAM,uCAAuC,CAAC;AAEnF,OAAO,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,uBAAuB,CAAC;AACzD,OAAO,EAAE,MAAM,EAAE,MAAM,8BAA8B,CAAC;AACtD,OAAO,EAA6F,WAAW,EAAsH,MAAM,kBAAkB,CAAC;AAE9P,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAG7D,OAAO,EAAE,WAAW,EAAc,MAAM,qCAAqC,CAAC;AAE9E,eAAO,MAAM,SAAS,SAAS,CAAC;AAEhC,eAAO,MAAM,eAAe,SAAS,CAAC;AAEtC,eAAO,MAAM,4BAA4B,+BAA+B,CAAC;AAEzE,eAAO,MAAM,sBAAsB,yBAAyB,CAAC;AAE7D,eAAO,MAAM,MAAM,EAAE,UAAU,CAAC,MAAM,CAA+F,CAAC;AAEtI,wBAAgB,UAAU,CAAC,IAAI,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,UAAU,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,iBAAiB,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,uBAAuB,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,QAAQ,EAAE,QAAQ,EAAE,GAAG,MAAM,CAKrL;AAED,wBAAgB,eAAe,CAAC,MAAM,EAAE,WAAW,GAAG,UAAU,CAAC,MAAM,CAAC,CAavE;AAED,wBAAgB,aAAa,CAAC,OAAO,EAAE,UAAU,CAAC,MAAM,CAAC,GAAG,WAAW,CAwBtE;AAED,wBAAgB,QAAQ,CAAC,MAAM,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,UAAU,EAAE,KAAK,EAAE,IAAI,EAAE,WAAW,CAAC,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,CAAC,GAAG,CAAC,MAAM,CAAC,MAAM,CAAC,EAAE,KAAK,EAAE,UAAU,CAAC,MAAM,CAAC,EAAE,UAAU,CAAC,MAAM,CAAC,CAAC,CAGjL;AAED,wBAAgB,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,OAAO,EAAE,UAAU,CAAC,MAAM,CAAC,GAAG,QAAQ,CAAC,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,CAAC,CAQ/G"}
|
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
import { ofArray, length, singleton, initialize, map, empty, iterateIndexed, cons, reverse } from '../../../node_modules/@fable-org/fable-library-ts/List.js';
|
|
2
2
|
import { OntologyAnnotation } from '../../Core/OntologyAnnotation.js';
|
|
3
|
-
import { unwrap, defaultArg
|
|
3
|
+
import { unwrap, defaultArg } from '../../../node_modules/@fable-org/fable-library-ts/Option.js';
|
|
4
4
|
import { Option_fromValueWithDefault, ResizeArray_iter } from '../../Core/Helper/Collections.js';
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import { Factor } from '../../Core/Process/Factor.js';
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import { SparseTable_GetEmptyComments_3ECCA699, SparseTable__TryGetValueDefault_5BAE6133, SparseTable__TryGetValue_11FD62A8, SparseTable_Create_Z2192E64B, SparseTable, SparseTable_FromRows_Z5579EC29, SparseTable_ToRows_759CAFC1 } from './SparseTable.js';
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@@ -50,7 +50,7 @@ function toSparseTable(factors) {
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ResizeArray_iter((comment) => {
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const n = Comment_addToMatrix(i_1, comment, matrix.Matrix);
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commentKeys = cons(n, commentKeys);
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},
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+
}, matchValue);
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}, factors);
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return new SparseTable(matrix.Matrix, matrix.Keys, reverse(List_distinct(commentKeys, {
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@@ -59,7 +59,7 @@ function toSparseTable(factors) {
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const tupledArg = prefix == null ? SparseTable_FromRows_Z5579EC29(rows, labels, lineNumber) : SparseTable_FromRows_Z5579EC29(rows, labels, lineNumber,
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const tupledArg = prefix == null ? SparseTable_FromRows_Z5579EC29(rows, labels, lineNumber) : SparseTable_FromRows_Z5579EC29(rows, labels, lineNumber, prefix);
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function toRows(prefix, factors) {
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return SparseTable_ToRows_759CAFC1(m,
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return SparseTable_ToRows_759CAFC1(m, prefix);
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@@ -1 +1 @@
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1
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-
{"version":3,"file":"OntologyAnnotation.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Spreadsheet/Metadata/OntologyAnnotation.ts"],"names":[],"mappings":"AACA,OAAO,EAAiD,UAAU,EAAsC,MAAM,qCAAqC,CAAC;AACpJ,OAAO,EAA6F,WAAW,EAAsH,MAAM,kBAAkB,CAAC;AAC9P,OAAO,EAAE,MAAM,EAAY,MAAM,uBAAuB,CAAC;AACzD,OAAO,EAAE,kBAAkB,EAAE,MAAM,kCAAkC,CAAC;AAEtE,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAC7D,OAAO,EAAE,MAAM,
|
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1
|
+
{"version":3,"file":"OntologyAnnotation.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Spreadsheet/Metadata/OntologyAnnotation.ts"],"names":[],"mappings":"AACA,OAAO,EAAiD,UAAU,EAAsC,MAAM,qCAAqC,CAAC;AACpJ,OAAO,EAA6F,WAAW,EAAsH,MAAM,kBAAkB,CAAC;AAC9P,OAAO,EAAE,MAAM,EAAY,MAAM,uBAAuB,CAAC;AACzD,OAAO,EAAE,kBAAkB,EAAE,MAAM,kCAAkC,CAAC;AAEtE,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAC7D,OAAO,EAAE,MAAM,EAAU,MAAM,uCAAuC,CAAC;AAIvE,OAAO,EAAE,WAAW,EAAc,MAAM,qCAAqC,CAAC;AAE9E,wBAAgB,eAAe,CAAC,KAAK,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,EAAE,MAAM,EAAE,WAAW,GAAG,UAAU,CAAC,kBAAkB,CAAC,CActI;AAED,wBAAgB,aAAa,CAAC,KAAK,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,EAAE,OAAO,EAAE,UAAU,CAAC,kBAAkB,CAAC,GAAG,WAAW,CAkBrI;AAED,wBAAgB,QAAQ,CAAC,MAAM,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,KAAK,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,EAAE,UAAU,EAAE,KAAK,EAAE,IAAI,EAAE,WAAW,CAAC,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,CAAC,GAAG,CAAC,MAAM,CAAC,MAAM,CAAC,EAAE,KAAK,EAAE,UAAU,CAAC,MAAM,CAAC,EAAE,UAAU,CAAC,kBAAkB,CAAC,CAAC,CAIhP;AAED,wBAAgB,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,KAAK,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,EAAE,OAAO,EAAE,UAAU,CAAC,kBAAkB,CAAC,GAAG,QAAQ,CAAC,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,CAAC,CAQ9K"}
|
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@@ -2,7 +2,7 @@ import { length, singleton, initialize, map, ofArray, empty, iterateIndexed, con
|
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2
2
|
import { SparseTable_GetEmptyComments_3ECCA699, SparseTable__TryGetValueDefault_5BAE6133, SparseTable__TryGetValue_11FD62A8, SparseTable_Create_Z2192E64B, SparseTable, SparseTable_FromRows_Z5579EC29, SparseTable_ToRows_759CAFC1 } from './SparseTable.js';
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3
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import { OntologyAnnotation } from '../../Core/OntologyAnnotation.js';
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4
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import { Comment_fromString, Comment_addToMatrix } from './Comment.js';
|
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5
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import { unwrap
|
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5
|
+
import { unwrap } from '../../../node_modules/@fable-org/fable-library-ts/Option.js';
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6
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import { addToDict } from '../../../node_modules/@fable-org/fable-library-ts/MapUtil.js';
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7
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import { ResizeArray_iter } from '../../Core/Helper/Collections.js';
|
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8
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import { List_distinct } from '../../../node_modules/@fable-org/fable-library-ts/Seq2.js';
|
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@@ -43,7 +43,7 @@ function toSparseTable(label, labelTSR, labelTAN, designs) {
|
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43
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}
|
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44
|
function fromRows(prefix, label, labelTSR, labelTAN, lineNumber, rows) {
|
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45
|
const labels = ofArray([label, labelTAN, labelTSR]);
|
|
46
|
-
const tupledArg = prefix == null ? SparseTable_FromRows_Z5579EC29(rows, labels, lineNumber) : SparseTable_FromRows_Z5579EC29(rows, labels, lineNumber,
|
|
46
|
+
const tupledArg = prefix == null ? SparseTable_FromRows_Z5579EC29(rows, labels, lineNumber) : SparseTable_FromRows_Z5579EC29(rows, labels, lineNumber, prefix);
|
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47
|
return [tupledArg[0], tupledArg[1], tupledArg[2], fromSparseTable(label, labelTSR, labelTAN, tupledArg[3])];
|
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48
48
|
}
|
|
49
49
|
function toRows(prefix, label, labelTSR, labelTAN, designs) {
|
|
@@ -51,7 +51,7 @@ function toRows(prefix, label, labelTSR, labelTAN, designs) {
|
|
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51
51
|
if (prefix == null) {
|
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52
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return SparseTable_ToRows_759CAFC1(m);
|
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53
|
} else {
|
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54
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-
return SparseTable_ToRows_759CAFC1(m,
|
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54
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+
return SparseTable_ToRows_759CAFC1(m, prefix);
|
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55
55
|
}
|
|
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|
}
|
|
57
57
|
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|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"Protocols.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Spreadsheet/Metadata/Protocols.ts"],"names":[],"mappings":"AACA,OAAO,EAA4F,UAAU,EAAW,MAAM,qCAAqC,CAAC;AAEpK,OAAO,EAAc,MAAM,
|
|
1
|
+
{"version":3,"file":"Protocols.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Spreadsheet/Metadata/Protocols.ts"],"names":[],"mappings":"AACA,OAAO,EAA4F,UAAU,EAAW,MAAM,qCAAqC,CAAC;AAEpK,OAAO,EAAc,MAAM,EAAU,MAAM,uCAAuC,CAAC;AAInF,OAAO,EAA6B,QAAQ,EAAiB,MAAM,gCAAgC,CAAC;AAEpG,OAAO,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,uBAAuB,CAAC;AACzD,OAAO,EAA6F,WAAW,EAAsH,MAAM,kBAAkB,CAAC;AAE9P,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAG7D,OAAO,EAAE,WAAW,EAAc,MAAM,qCAAqC,CAAC;AAE9E,eAAO,MAAM,SAAS,SAAS,CAAC;AAEhC,eAAO,MAAM,iBAAiB,SAAS,CAAC;AAExC,eAAO,MAAM,4BAA4B,+BAA+B,CAAC;AAEzE,eAAO,MAAM,sBAAsB,yBAAyB,CAAC;AAE7D,eAAO,MAAM,gBAAgB,gBAAgB,CAAC;AAE9C,eAAO,MAAM,QAAQ,QAAQ,CAAC;AAE9B,eAAO,MAAM,YAAY,YAAY,CAAC;AAEtC,eAAO,MAAM,mBAAmB,oBAAoB,CAAC;AAErD,eAAO,MAAM,kCAAkC,qCAAqC,CAAC;AAErF,eAAO,MAAM,4BAA4B,+BAA+B,CAAC;AAEzE,eAAO,MAAM,mBAAmB,oBAAoB,CAAC;AAErD,eAAO,MAAM,mBAAmB,oBAAoB,CAAC;AAErD,eAAO,MAAM,sCAAsC,0CAA0C,CAAC;AAE9F,eAAO,MAAM,gCAAgC,oCAAoC,CAAC;AAElF,eAAO,MAAM,MAAM,EAAE,UAAU,CAAC,MAAM,CAAsV,CAAC;AAE7X,wBAAgB,UAAU,CAAC,IAAI,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,YAAY,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,uBAAuB,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,iBAAiB,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,WAAW,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,GAAG,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,OAAO,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,cAAc,EAAE,MAAM,EAAE,6BAA6B,EAAE,MAAM,EAAE,uBAAuB,EAAE,MAAM,EAAE,cAAc,EAAE,MAAM,EAAE,cAAc,EAAE,MAAM,EAAE,iCAAiC,EAAE,MAAM,EAAE,2BAA2B,EAAE,MAAM,EAAE,QAAQ,EAAE,UAAU,CAAC,QAAQ,CAAC,GAAG,QAAQ,CAM9e;AAED,wBAAgB,eAAe,CAAC,MAAM,EAAE,WAAW,GAAG,UAAU,CAAC,QAAQ,CAAC,CAUzE;AAED,wBAAgB,aAAa,CAAC,SAAS,EAAE,UAAU,CAAC,QAAQ,CAAC,GAAG,WAAW,CAoC1E;AAED,wBAAgB,QAAQ,CAAC,MAAM,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,UAAU,EAAE,KAAK,EAAE,IAAI,EAAE,WAAW,CAAC,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,CAAC,GAAG,CAAC,MAAM,CAAC,MAAM,CAAC,EAAE,KAAK,EAAE,UAAU,CAAC,MAAM,CAAC,EAAE,UAAU,CAAC,QAAQ,CAAC,CAAC,CAGnL;AAED,wBAAgB,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,SAAS,EAAE,UAAU,CAAC,QAAQ,CAAC,GAAG,QAAQ,CAAC,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,CAAC,CAQnH"}
|
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
import { ofArray, ofSeq, empty, length, singleton, initialize, map, iterateIndexed, iterate, cons, reverse } from '../../../node_modules/@fable-org/fable-library-ts/List.js';
|
|
2
2
|
import { OntologyAnnotation } from '../../Core/OntologyAnnotation.js';
|
|
3
|
-
import { unwrap,
|
|
3
|
+
import { unwrap, defaultArg } from '../../../node_modules/@fable-org/fable-library-ts/Option.js';
|
|
4
4
|
import { ProtocolParameter_fromAggregatedStrings, Component_fromAggregatedStrings, Option_fromValueWithDefault, ProtocolParameter_toAggregatedStrings, Component_toAggregatedStrings } from './Conversions.js';
|
|
5
5
|
import { Protocol_make, Protocol_create_Z414665E7 } from '../../Core/Process/Protocol.js';
|
|
6
6
|
import { URIModule_fromString } from '../../Core/URI.js';
|
|
@@ -30,7 +30,7 @@ function fromString(name, protocolType, typeTermAccessionNumber, typeTermSourceR
|
|
|
30
30
|
const protocolType_1 = OntologyAnnotation.create(unwrap(protocolType), unwrap(typeTermSourceREF), unwrap(typeTermAccessionNumber));
|
|
31
31
|
const parameters = ofSeq(ProtocolParameter_fromAggregatedStrings(";", parametersName, parametersTermSourceREF, parametersTermAccessionNumber));
|
|
32
32
|
const components = Component_fromAggregatedStrings(";", componentsName, componentsType, componentsTypeTermSourceREF, componentsTypeTermAccessionNumber);
|
|
33
|
-
return Protocol_make(void 0, (option_1 = name, option_1 != null ? URIModule_fromString(
|
|
33
|
+
return Protocol_make(void 0, (option_1 = name, option_1 != null ? URIModule_fromString(option_1) : void 0), Option_fromValueWithDefault(new OntologyAnnotation(), protocolType_1), description, (option_3 = uri, option_3 != null ? URIModule_fromString(option_3) : void 0), version, Option_fromValueWithDefault(empty(), parameters), Option_fromValueWithDefault(empty(), components), Option_fromValueWithDefault(empty(), comments));
|
|
34
34
|
}
|
|
35
35
|
function fromSparseTable(matrix) {
|
|
36
36
|
if (matrix.ColumnCount === 0 && length(matrix.CommentKeys) !== 0) {
|
|
@@ -71,7 +71,7 @@ function toSparseTable(protocols) {
|
|
|
71
71
|
iterate((comment) => {
|
|
72
72
|
const n = Comment_addToMatrix(i_1, comment, matrix.Matrix);
|
|
73
73
|
commentKeys = cons(n, commentKeys);
|
|
74
|
-
},
|
|
74
|
+
}, matchValue);
|
|
75
75
|
}
|
|
76
76
|
}, protocols);
|
|
77
77
|
return new SparseTable(matrix.Matrix, matrix.Keys, reverse(List_distinct(commentKeys, {
|
|
@@ -80,7 +80,7 @@ function toSparseTable(protocols) {
|
|
|
80
80
|
})), matrix.ColumnCount);
|
|
81
81
|
}
|
|
82
82
|
function fromRows(prefix, lineNumber, rows) {
|
|
83
|
-
const tupledArg = prefix == null ? SparseTable_FromRows_Z5579EC29(rows, labels, lineNumber) : SparseTable_FromRows_Z5579EC29(rows, labels, lineNumber,
|
|
83
|
+
const tupledArg = prefix == null ? SparseTable_FromRows_Z5579EC29(rows, labels, lineNumber) : SparseTable_FromRows_Z5579EC29(rows, labels, lineNumber, prefix);
|
|
84
84
|
return [tupledArg[0], tupledArg[1], tupledArg[2], fromSparseTable(tupledArg[3])];
|
|
85
85
|
}
|
|
86
86
|
function toRows(prefix, protocols) {
|
|
@@ -88,7 +88,7 @@ function toRows(prefix, protocols) {
|
|
|
88
88
|
if (prefix == null) {
|
|
89
89
|
return SparseTable_ToRows_759CAFC1(m);
|
|
90
90
|
} else {
|
|
91
|
-
return SparseTable_ToRows_759CAFC1(m,
|
|
91
|
+
return SparseTable_ToRows_759CAFC1(m, prefix);
|
|
92
92
|
}
|
|
93
93
|
}
|
|
94
94
|
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"Publication.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Spreadsheet/Metadata/Publication.ts"],"names":[],"mappings":"AACA,OAAO,EAA4E,UAAU,EAAW,MAAM,qCAAqC,CAAC;AAEpJ,OAAO,
|
|
1
|
+
{"version":3,"file":"Publication.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Spreadsheet/Metadata/Publication.ts"],"names":[],"mappings":"AACA,OAAO,EAA4E,UAAU,EAAW,MAAM,qCAAqC,CAAC;AAEpJ,OAAO,EAAc,MAAM,EAAU,MAAM,uCAAuC,CAAC;AAGnF,OAAO,EAAE,WAAW,EAAE,MAAM,2BAA2B,CAAC;AACxD,OAAO,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,uBAAuB,CAAC;AACzD,OAAO,EAA6F,WAAW,EAAsH,MAAM,kBAAkB,CAAC;AAE9P,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAG7D,OAAO,EAAE,WAAW,EAAc,MAAM,qCAAqC,CAAC;AAE9E,eAAO,MAAM,aAAa,cAAc,CAAC;AAEzC,eAAO,MAAM,QAAQ,QAAQ,CAAC;AAE9B,eAAO,MAAM,eAAe,gBAAgB,CAAC;AAE7C,eAAO,MAAM,UAAU,UAAU,CAAC;AAElC,eAAO,MAAM,WAAW,WAAW,CAAC;AAEpC,eAAO,MAAM,8BAA8B,iCAAiC,CAAC;AAE7E,eAAO,MAAM,wBAAwB,2BAA2B,CAAC;AAEjE,eAAO,MAAM,MAAM,EAAE,UAAU,CAAC,MAAM,CAA0I,CAAC;AAEjL,wBAAgB,UAAU,CAAC,QAAQ,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,GAAG,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,MAAM,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,KAAK,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,MAAM,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,mBAAmB,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,yBAAyB,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,QAAQ,EAAE,QAAQ,EAAE,GAAG,WAAW,CAOlQ;AAED,wBAAgB,eAAe,CAAC,MAAM,EAAE,WAAW,GAAG,UAAU,CAAC,WAAW,CAAC,CAc5E;AAED,wBAAgB,aAAa,CAAC,YAAY,EAAE,UAAU,CAAC,WAAW,CAAC,GAAG,WAAW,CAwBhF;AAED,wBAAgB,QAAQ,CAAC,MAAM,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,UAAU,EAAE,KAAK,EAAE,IAAI,EAAE,WAAW,CAAC,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,CAAC,GAAG,CAAC,MAAM,CAAC,MAAM,CAAC,EAAE,KAAK,EAAE,UAAU,CAAC,MAAM,CAAC,EAAE,UAAU,CAAC,WAAW,CAAC,CAAC,CAGtL;AAED,wBAAgB,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,YAAY,EAAE,UAAU,CAAC,WAAW,CAAC,GAAG,QAAQ,CAAC,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,CAAC,CAQzH"}
|
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
import { ofArray, length, singleton, initialize, map, empty, iterateIndexed, cons, reverse } from '../../../node_modules/@fable-org/fable-library-ts/List.js';
|
|
2
2
|
import { OntologyAnnotation } from '../../Core/OntologyAnnotation.js';
|
|
3
|
-
import { unwrap,
|
|
3
|
+
import { unwrap, defaultArg } from '../../../node_modules/@fable-org/fable-library-ts/Option.js';
|
|
4
4
|
import { URIModule_fromString } from '../../Core/URI.js';
|
|
5
5
|
import { Option_fromValueWithDefault, ResizeArray_iter } from '../../Core/Helper/Collections.js';
|
|
6
6
|
import { Publication } from '../../Core/Publication.js';
|
|
@@ -22,7 +22,7 @@ function fromString(pubMedID, doi, author, title, status, statusTermSourceREF, s
|
|
|
22
22
|
const status_1 = new OntologyAnnotation(unwrap(status), unwrap(statusTermSourceREF), unwrap(statusTermAccessionNumber));
|
|
23
23
|
let pubMedID_1;
|
|
24
24
|
const option_1 = pubMedID;
|
|
25
|
-
pubMedID_1 = option_1 != null ? URIModule_fromString(
|
|
25
|
+
pubMedID_1 = option_1 != null ? URIModule_fromString(option_1) : void 0;
|
|
26
26
|
const status_2 = Option_fromValueWithDefault(new OntologyAnnotation(), status_1);
|
|
27
27
|
return Publication.make(pubMedID_1, doi, author, title, status_2, comments);
|
|
28
28
|
}
|
|
@@ -66,7 +66,7 @@ function toSparseTable(publications) {
|
|
|
66
66
|
})), matrix.ColumnCount);
|
|
67
67
|
}
|
|
68
68
|
function fromRows(prefix, lineNumber, rows) {
|
|
69
|
-
const tupledArg = prefix == null ? SparseTable_FromRows_Z5579EC29(rows, labels, lineNumber) : SparseTable_FromRows_Z5579EC29(rows, labels, lineNumber,
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69
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+
const tupledArg = prefix == null ? SparseTable_FromRows_Z5579EC29(rows, labels, lineNumber) : SparseTable_FromRows_Z5579EC29(rows, labels, lineNumber, prefix);
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return [tupledArg[0], tupledArg[1], tupledArg[2], fromSparseTable(tupledArg[3])];
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}
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function toRows(prefix, publications) {
|
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@@ -74,7 +74,7 @@ function toRows(prefix, publications) {
|
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74
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if (prefix == null) {
|
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75
|
return SparseTable_ToRows_759CAFC1(m);
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} else {
|
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77
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-
return SparseTable_ToRows_759CAFC1(m,
|
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77
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+
return SparseTable_ToRows_759CAFC1(m, prefix);
|
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78
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}
|
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79
79
|
}
|
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80
|
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@@ -1,6 +1,6 @@
|
|
|
1
1
|
import { FSharpList } from '@fable-org/fable-library-ts/List.ts';
|
|
2
|
-
import { Option } from '@fable-org/fable-library-ts/Option.ts';
|
|
3
2
|
import { IEnumerator } from '@fable-org/fable-library-ts/Util.ts';
|
|
3
|
+
import { Option } from '@fable-org/fable-library-ts/Option.ts';
|
|
4
4
|
import { ArcRun } from '../../Core/ArcTypes.ts';
|
|
5
5
|
import { Remark, Comment$ } from '../../Core/Comment.ts';
|
|
6
6
|
import { SparseTable } from './SparseTable.ts';
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"Run.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Spreadsheet/Metadata/Run.ts"],"names":[],"mappings":"AACA,OAAO,EAA6B,UAAU,EAAW,MAAM,qCAAqC,CAAC;AACrG,OAAO,
|
|
1
|
+
{"version":3,"file":"Run.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Spreadsheet/Metadata/Run.ts"],"names":[],"mappings":"AACA,OAAO,EAA6B,UAAU,EAAW,MAAM,qCAAqC,CAAC;AACrG,OAAO,EAAE,WAAW,EAA4B,MAAM,qCAAqC,CAAC;AAE5F,OAAO,EAAc,MAAM,EAAU,MAAM,uCAAuC,CAAC;AAInF,OAAO,EAAE,MAAM,EAAE,MAAM,wBAAwB,CAAC;AAChD,OAAO,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,uBAAuB,CAAC;AAEzD,OAAO,EAA6F,WAAW,EAA+E,MAAM,kBAAkB,CAAC;AACvN,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAK7D,eAAO,MAAM,MAAM,EAAE,UAAU,CAAC,MAAM,CAAgT,CAAC;AAEvV,wBAAgB,UAAU,CAAC,UAAU,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,KAAK,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,WAAW,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,mBAAmB,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,eAAe,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,4BAA4B,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,kCAAkC,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,cAAc,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,2BAA2B,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,iCAAiC,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,kBAAkB,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,QAAQ,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,QAAQ,EAAE,QAAQ,EAAE,GAAG,MAAM,CA+B7e;AAED,wBAAgB,eAAe,CAAC,MAAM,EAAE,WAAW,GAAG,MAAM,CAK3D;AAED,wBAAgB,aAAa,CAAC,GAAG,EAAE,MAAM,GAAG,WAAW,CAgCtD;AAED,wBAAgB,QAAQ,CAAC,UAAU,EAAE,KAAK,EAAE,IAAI,EAAE,WAAW,CAAC,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,CAAC,GAAG,CAAC,MAAM,CAAC,MAAM,CAAC,EAAE,KAAK,EAAE,UAAU,CAAC,MAAM,CAAC,EAAE,MAAM,CAAC,CAG7I;AAED,wBAAgB,MAAM,CAAC,GAAG,EAAE,MAAM,GAAG,QAAQ,CAAC,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,CAAC,CAEvE"}
|
|
@@ -1,7 +1,7 @@
|
|
|
1
1
|
import { ofArray, map, empty, cons, reverse } from '../../../node_modules/@fable-org/fable-library-ts/List.js';
|
|
2
|
-
import { value, unwrap, defaultArg } from '../../../node_modules/@fable-org/fable-library-ts/Option.js';
|
|
3
2
|
import { stringHash } from '../../../node_modules/@fable-org/fable-library-ts/Util.js';
|
|
4
3
|
import { OntologyAnnotation } from '../../Core/OntologyAnnotation.js';
|
|
4
|
+
import { unwrap, defaultArg } from '../../../node_modules/@fable-org/fable-library-ts/Option.js';
|
|
5
5
|
import { createMissingIdentifier, Assay_tryIdentifierFromFileName, Run_fileNameFromIdentifier } from '../../Core/Helper/Identifier.js';
|
|
6
6
|
import { Option_fromValueWithDefault, ResizeArray_iter } from '../../Core/Helper/Collections.js';
|
|
7
7
|
import { JsonTypes_decomposeTechnologyPlatform, JsonTypes_composeTechnologyPlatform } from '../../Core/Conversion.js';
|
|
@@ -18,7 +18,7 @@ function fromString(identifier, title, description, workflowIdentifiers, measure
|
|
|
18
18
|
if (workflowIdentifiers == null) {
|
|
19
19
|
workflowIdentifiers_1 = [];
|
|
20
20
|
} else {
|
|
21
|
-
const wi =
|
|
21
|
+
const wi = workflowIdentifiers;
|
|
22
22
|
const collection = wi.split(";");
|
|
23
23
|
workflowIdentifiers_1 = Array.from(collection);
|
|
24
24
|
}
|
|
@@ -29,17 +29,17 @@ function fromString(identifier, title, description, workflowIdentifiers, measure
|
|
|
29
29
|
if (fileName == null) {
|
|
30
30
|
identifier_4 = createMissingIdentifier();
|
|
31
31
|
} else {
|
|
32
|
-
const matchValue = Assay_tryIdentifierFromFileName(
|
|
33
|
-
identifier_4 = matchValue != null ?
|
|
32
|
+
const matchValue = Assay_tryIdentifierFromFileName(fileName);
|
|
33
|
+
identifier_4 = matchValue != null ? matchValue : createMissingIdentifier();
|
|
34
34
|
}
|
|
35
35
|
} else {
|
|
36
|
-
identifier_4 =
|
|
36
|
+
identifier_4 = identifier;
|
|
37
37
|
}
|
|
38
38
|
const measurementType_2 = Option_fromValueWithDefault(new OntologyAnnotation(), measurementType_1);
|
|
39
39
|
const technologyType_2 = Option_fromValueWithDefault(new OntologyAnnotation(), technologyType_1);
|
|
40
40
|
let technologyPlatform_1;
|
|
41
41
|
const option_1 = technologyPlatform;
|
|
42
|
-
technologyPlatform_1 = option_1 != null ? JsonTypes_decomposeTechnologyPlatform(
|
|
42
|
+
technologyPlatform_1 = option_1 != null ? JsonTypes_decomposeTechnologyPlatform(option_1) : void 0;
|
|
43
43
|
return ArcRun.make(identifier_4, title, description, measurementType_2, technologyType_2, technologyPlatform_1, workflowIdentifiers_1, [], void 0, [], void 0, [], comments);
|
|
44
44
|
}
|
|
45
45
|
function fromSparseTable(matrix) {
|
|
@@ -70,7 +70,7 @@ function toSparseTable(run) {
|
|
|
70
70
|
addToDict(matrix.Matrix, ["Technology Type", 1], tt_1.TermName);
|
|
71
71
|
addToDict(matrix.Matrix, ["Technology Type Term Accession Number", 1], tt_1.TermAccessionNumber);
|
|
72
72
|
addToDict(matrix.Matrix, ["Technology Type Term Source REF", 1], tt_1.TermSourceREF);
|
|
73
|
-
addToDict(matrix.Matrix, ["Technology Platform", 1], defaultArg((option_1 = run.TechnologyPlatform, option_1 != null ? JsonTypes_composeTechnologyPlatform(
|
|
73
|
+
addToDict(matrix.Matrix, ["Technology Platform", 1], defaultArg((option_1 = run.TechnologyPlatform, option_1 != null ? JsonTypes_composeTechnologyPlatform(option_1) : void 0), ""));
|
|
74
74
|
addToDict(matrix.Matrix, ["File Name", 1], patternInput[1]);
|
|
75
75
|
ResizeArray_iter((comment) => {
|
|
76
76
|
const n = Comment_addToMatrix(1, comment, matrix.Matrix);
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"SparseTable.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Spreadsheet/Metadata/SparseTable.ts"],"names":[],"mappings":"AAEA,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAC7D,OAAO,
|
|
1
|
+
{"version":3,"file":"SparseTable.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Spreadsheet/Metadata/SparseTable.ts"],"names":[],"mappings":"AAEA,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAC7D,OAAO,EAAc,MAAM,EAAE,MAAM,uCAAuC,CAAC;AAE3E,OAAO,EAAE,WAAW,EAAE,UAAU,EAAE,IAAI,EAAwC,MAAM,qCAAqC,CAAC;AAE1H,OAAO,EAAE,KAAK,EAAE,MAAM,qDAAqD,CAAC;AAG5E,OAAO,EAAiF,iBAAiB,EAAwB,MAAM,yDAAyD,CAAC;AACjM,OAAO,EAA0F,UAAU,EAAE,MAAM,qCAAqC,CAAC;AAIzJ,OAAO,EAAE,WAAW,EAAE,MAAM,2DAA2D,CAAC;AAGxF,OAAO,EAAE,MAAM,EAAE,MAAM,sCAAsC,CAAC;AAC9D,OAAO,EAA2E,QAAQ,EAAE,MAAM,2CAA2C,CAAC;AAI9I,OAAO,EAAE,QAAQ,EAAE,MAAM,EAAE,MAAM,uBAAuB,CAAC;AAGzD,wBAAgB,0BAA0B,CAAC,CAAC,EAAE,QAAQ,CAAC,MAAM,CAAC,GAAG,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,CAEzF;AAED,wBAAgB,yBAAyB,CAAC,CAAC,EAAE,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,GAAG,QAAQ,CAAC,MAAM,CAAC,CAExF;AAED,wBAAgB,6BAA6B,CAAC,CAAC,EAAE,QAAQ,CAAC,MAAM,CAAC,MAAM,CAAC,CAAC,GAAG,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,CAUpG;AAED,wBAAgB,4BAA4B,CAAC,CAAC,EAAE,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,GAAG,QAAQ,CAAC,MAAM,CAAC,MAAM,CAAC,CAAC,CAOnG;AAED,wBAAgB,yBAAyB,CAAC,CAAC,EAAE,KAAK,GAAG,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,CAS7E;AAED,wBAAgB,6BAA6B,CAAC,CAAC,EAAE,KAAK,EAAE,EAAE,EAAE,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,GAAG,MAAM,CAAC,MAAM,CAAC,CASrG;AAED,wBAAgB,wBAAwB,CAAC,EAAE,EAAE,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,GAAG,UAAU,CAAC,iBAAiB,CAAC,CAyMrG;AAED,wBAAgB,6BAA6B,CAAC,KAAK,EAAE,WAAW,GAAG,QAAQ,CAAC,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,CAAC,CAErG;AAED,wBAAgB,4BAA4B,CAAC,IAAI,EAAE,KAAK,EAAE,GAAG,EAAE,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,EAAE,KAAK,EAAE,WAAW,GAAG,IAAI,CAQlH;AAED,qBAAa,WAAY,SAAQ,MAAO,YAAW,UAAU,CAAC,WAAW,CAAC;IACtE,QAAQ,CAAC,MAAM,EAAE,IAAI,CAAC,CAAC,MAAM,EAAE,KAAK,CAAC,EAAE,MAAM,CAAC,CAAC;IAC/C,QAAQ,CAAC,IAAI,EAAE,UAAU,CAAC,MAAM,CAAC,CAAC;IAClC,QAAQ,CAAC,WAAW,EAAE,UAAU,CAAC,MAAM,CAAC,CAAC;IACzC,QAAQ,CAAC,WAAW,EAAE,KAAK,CAAC;gBAChB,MAAM,EAAE,IAAI,CAAC,CAAC,MAAM,EAAE,KAAK,CAAC,EAAE,MAAM,CAAC,EAAE,IAAI,EAAE,UAAU,CAAC,MAAM,CAAC,EAAE,WAAW,EAAE,UAAU,CAAC,MAAM,CAAC,EAAE,WAAW,EAAE,KAAK;CAOnI;AAED,wBAAgB,uBAAuB,IAAI,QAAQ,CAElD;AAED,wBAAgB,iCAAiC,CAAC,KAAK,EAAE,WAAW,EAAE,GAAG,EAAE,CAAC,MAAM,EAAE,KAAK,CAAC,GAAG,MAAM,CAAC,MAAM,CAAC,CAE1G;AAED,wBAAgB,wCAAwC,CAAC,KAAK,EAAE,WAAW,EAAE,YAAY,EAAE,MAAM,EAAE,GAAG,EAAE,CAAC,MAAM,EAAE,KAAK,CAAC,GAAG,MAAM,CAO/H;AAED,wBAAgB,4BAA4B,CAAC,MAAM,CAAC,EAAE,IAAI,CAAC,CAAC,MAAM,EAAE,KAAK,CAAC,EAAE,MAAM,CAAC,EAAE,IAAI,CAAC,EAAE,UAAU,CAAC,MAAM,CAAC,EAAE,WAAW,CAAC,EAAE,UAAU,CAAC,MAAM,CAAC,EAAE,MAAM,CAAC,EAAE,KAAK,GAAG,WAAW,CAE7K;AAED,wBAAgB,kBAAkB,CAAC,GAAG,EAAE,MAAM,EAAE,MAAM,EAAE,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,EAAE,MAAM,EAAE,WAAW,GAAG,WAAW,CAQnH;AAED,wBAAgB,2BAA2B,CAAC,GAAG,EAAE,MAAM,EAAE,MAAM,EAAE,WAAW,GAAG,WAAW,CAEzF;AAED,wBAAgB,sBAAsB,CAAC,GAAG,EAAE,MAAM,EAAE,MAAM,EAAE,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,EAAE,MAAM,EAAE,WAAW,GAAG,WAAW,CAavH;AAED,wBAAgB,8BAA8B,CAAC,EAAE,EAAE,WAAW,CAAC,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,CAAC,EAAE,MAAM,EAAE,UAAU,CAAC,MAAM,CAAC,EAAE,UAAU,EAAE,KAAK,EAAE,MAAM,CAAC,EAAE,MAAM,GAAG,CAAC,MAAM,CAAC,MAAM,CAAC,EAAE,KAAK,EAAE,UAAU,CAAC,MAAM,CAAC,EAAE,WAAW,CAAC,CAsGnN;AAED,wBAAgB,2BAA2B,CAAC,MAAM,EAAE,WAAW,EAAE,MAAM,CAAC,EAAE,MAAM,GAAG,QAAQ,CAAC,QAAQ,CAAC,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,CAAC,CAGrH;AAED,wBAAgB,qCAAqC,CAAC,MAAM,EAAE,WAAW,GAAG,QAAQ,EAAE,CAGrF"}
|