@nfdi4plants/arctrl 3.0.0-beta.9 → 3.0.0

package/dist/ts/ts/ROCrate/LDTypes/ComputationalWorkflow.d.ts

@@ -0,0 +1,63 @@
+import { Option } from '@fable-org/fable-library-js/Option.js';
+import { LDGraph, LDNode } from '../LDObject.js';
+import { LDContext } from '../LDContext.js';
+import { FSharpList } from '@fable-org/fable-library-js/List.js';
+import { TypeInfo } from '@fable-org/fable-library-js/Reflection.js';
+export declare class LDComputationalWorkflow {
+    constructor();
+    static get schemaType(): string;
+    static get input(): string;
+    static get inputDeprecated(): string;
+    static get output(): string;
+    static get outputDeprecated(): string;
+    static get creator(): string;
+    static get dateCreated(): string;
+    static get license(): string;
+    static get name(): string;
+    static get programmingLanguage(): string;
+    static get sdPublisher(): string;
+    static get url(): string;
+    static get version(): string;
+    static get description(): string;
+    static get hasPart(): string;
+    static get additionalType(): string;
+    static get comment(): string;
+    static getInputs(cw: LDNode, graph?: LDGraph, context?: LDContext): LDNode[];
+    static getInputsAsFormalParameters(cw: LDNode, graph?: LDGraph, context?: LDContext): LDNode[];
+    static setInputs<$o>(cw: LDNode, inputs: LDNode[], context?: LDContext): $o;
+    static getOutputs(cw: LDNode, graph?: LDGraph, context?: LDContext): LDNode[];
+    static getOutputsAsFormalParameter(cw: LDNode, graph?: LDGraph, context?: LDContext): LDNode[];
+    static setOutputs<$n>(cw: LDNode, outputs: LDNode[], context?: LDContext): $n;
+    static getCreators(cw: LDNode, graph?: LDGraph, context?: LDContext): LDNode[];
+    static setCreators<$m>(cw: LDNode, creators: LDNode[], context?: LDContext): $m;
+    static tryGetDateCreated(cw: LDNode, context?: LDContext): Option<string>;
+    static tryGetDateCreatedAsDateTime(lp: LDNode, context?: LDContext): Option<Date>;
+    static setDateCreated<$l>(cw: LDNode, date: string, context?: LDContext): $l;
+    static setDateCreatedAsDateTime<$k>(lp: LDNode, dateCreated: Date, context?: LDContext): $k;
+    static getLicenses(cw: LDNode, graph?: LDGraph, context?: LDContext): LDNode[];
+    static setLicenses<$j>(cw: LDNode, licenses: LDNode[], context?: LDContext): $j;
+    static tryGetNameAsString(cw: LDNode, context?: LDContext): Option<string>;
+    static getNameAsString(cw: LDNode, context?: LDContext): string;
+    static setNameAsString<$i>(cw: LDNode, name: string, context?: LDContext): $i;
+    static getProgrammingLanguages(cw: LDNode, graph?: LDGraph, context?: LDContext): LDNode[];
+    static setProgrammingLanguages<$h>(cw: LDNode, programmingLanguages: LDNode[], context?: LDContext): $h;
+    static tryGetSdPublisher(cw: LDNode, graph?: LDGraph, context?: LDContext): Option<LDNode>;
+    static setSdPublisher<$g>(cw: LDNode, sdPublisher: LDNode, context?: LDContext): $g;
+    static tryGetUrl(cw: LDNode, context?: LDContext): Option<string>;
+    static setUrl<$f>(cw: LDNode, url: string, context?: LDContext): $f;
+    static tryGetVersion(cw: LDNode, context?: LDContext): Option<string>;
+    static setVersion<$e>(cw: LDNode, version: string, context?: LDContext): $e;
+    static tryGetDescription(cw: LDNode, context?: LDContext): Option<string>;
+    static setDescription<$d>(cw: LDNode, description: string, context?: LDContext): $d;
+    static getHasPart(cw: LDNode, graph?: LDGraph, context?: LDContext): LDNode[];
+    static setHasPart<$c>(cw: LDNode, hasParts: FSharpList<string>, context?: LDContext): $c;
+    static tryGetAdditionalTypeAsString(cw: LDNode, context?: LDContext): Option<string>;
+    static getAdditionalTypeAsString(cw: LDNode, context?: LDContext): string;
+    static setAdditionalTypeAsString<$b>(cw: LDNode, additionalType: string, context?: LDContext): $b;
+    static getComments(cw: LDNode, graph?: LDGraph, context?: LDContext): LDNode[];
+    static setComments<$a>(cw: LDNode, comments: LDNode[], context?: LDContext): $a;
+    static validate(lp: LDNode, context?: LDContext): boolean;
+    static create(id?: string, inputs?: LDNode[], outputs?: LDNode[], creator?: LDNode, dateCreated?: string, licenses?: LDNode[], name?: string, programmingLanguages?: LDNode[], sdPublisher?: LDNode, url?: string, version?: string, description?: string, hasParts?: LDNode[], comments?: LDNode[], context?: LDContext): LDNode;
+}
+export declare function LDComputationalWorkflow_$reflection(): TypeInfo;
+//# sourceMappingURL=ComputationalWorkflow.d.ts.map

package/dist/ts/ts/ROCrate/LDTypes/ComputationalWorkflow.d.ts.map

@@ -0,0 +1 @@
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package/dist/ts/ts/ROCrate/LDTypes/ComputationalWorkflow.js

@@ -0,0 +1,361 @@
+import { unwrap, value } from '../../../node_modules/@fable-org/fable-library-js/Option.js';
+import { LDNode } from '../LDObject.js';
+import { LDFormalParameter } from './FormalParameter.js';
+import { LDPerson } from './Person.js';
+import { LDOrganization } from './Organization.js';
+import { LDComment } from './Comment.js';
+import { clean } from '../Helper.js';
+import { createMissingIdentifier } from '../../Core/Helper/Identifier.js';
+import { class_type } from '../../../node_modules/@fable-org/fable-library-js/Reflection.js';
+
+class LDComputationalWorkflow {
+  constructor() {
+  }
+  static get schemaType() {
+    return "https://bioschemas.org/ComputationalWorkflow";
+  }
+  static get input() {
+    return "https://bioschemas.org/properties/input";
+  }
+  static get inputDeprecated() {
+    return "https://bioschemas.org/input";
+  }
+  static get output() {
+    return "https://bioschemas.org/properties/output";
+  }
+  static get outputDeprecated() {
+    return "https://bioschemas.org/output";
+  }
+  static get creator() {
+    return "http://schema.org/creator";
+  }
+  static get dateCreated() {
+    return "http://schema.org/dateCreated";
+  }
+  static get license() {
+    return "http://schema.org/license";
+  }
+  static get name() {
+    return "http://schema.org/name";
+  }
+  static get programmingLanguage() {
+    return "http://schema.org/programmingLanguage";
+  }
+  static get sdPublisher() {
+    return "http://schema.org/sdPublisher";
+  }
+  static get url() {
+    return "http://schema.org/url";
+  }
+  static get version() {
+    return "http://schema.org/version";
+  }
+  static get description() {
+    return "http://schema.org/description";
+  }
+  static get hasPart() {
+    return "http://schema.org/hasPart";
+  }
+  static get additionalType() {
+    return "http://schema.org/additionalType";
+  }
+  static get comment() {
+    return "http://schema.org/comment";
+  }
+  static getInputs(cw, graph, context) {
+    const l = cw.GetPropertyNodes(LDComputationalWorkflow.input, void 0, unwrap(graph), unwrap(context));
+    return l.length === 0 ? cw.GetPropertyNodes(LDComputationalWorkflow.inputDeprecated, void 0, unwrap(graph), unwrap(context)) : l;
+  }
+  static getInputsAsFormalParameters(cw, graph, context) {
+    const filter = (ldObject, context_1) => LDFormalParameter.validate(ldObject, unwrap(context_1));
+    const l = cw.GetPropertyNodes(LDComputationalWorkflow.input, filter, unwrap(graph), unwrap(context));
+    return l.length === 0 ? cw.GetPropertyNodes(LDComputationalWorkflow.inputDeprecated, filter, unwrap(graph), unwrap(context)) : l;
+  }
+  static setInputs(cw, inputs, context) {
+    return cw.SetProperty(LDComputationalWorkflow.input, inputs, unwrap(context));
+  }
+  static getOutputs(cw, graph, context) {
+    const l = cw.GetPropertyNodes(LDComputationalWorkflow.output, void 0, unwrap(graph), unwrap(context));
+    return l.length === 0 ? cw.GetPropertyNodes(LDComputationalWorkflow.outputDeprecated, void 0, unwrap(graph), unwrap(context)) : l;
+  }
+  static getOutputsAsFormalParameter(cw, graph, context) {
+    const filter = (ldObject, context_1) => LDFormalParameter.validate(ldObject, unwrap(context_1));
+    const l = cw.GetPropertyNodes(LDComputationalWorkflow.output, filter, unwrap(graph), unwrap(context));
+    return l.length === 0 ? cw.GetPropertyNodes(LDComputationalWorkflow.outputDeprecated, filter, unwrap(graph), unwrap(context)) : l;
+  }
+  static setOutputs(cw, outputs, context) {
+    return cw.SetProperty(LDComputationalWorkflow.output, outputs, unwrap(context));
+  }
+  static getCreators(cw, graph, context) {
+    return cw.GetPropertyNodes(LDComputationalWorkflow.creator, (ldObject, context_1) => {
+      if (LDPerson.validate(ldObject, unwrap(context_1))) {
+        return true;
+      } else {
+        return LDOrganization.validate(ldObject, unwrap(context_1));
+      }
+    }, unwrap(graph), unwrap(context));
+  }
+  static setCreators(cw, creators, context) {
+    return cw.SetProperty(LDComputationalWorkflow.creator, creators, unwrap(context));
+  }
+  static tryGetDateCreated(cw, context) {
+    const matchValue = cw.TryGetPropertyAsSingleton(LDComputationalWorkflow.dateCreated, unwrap(context));
+    let matchResult, d;
+    if (matchValue != null) {
+      if (typeof value(matchValue) === "string") {
+        matchResult = 0;
+        d = value(matchValue);
+      } else {
+        matchResult = 1;
+      }
+    } else {
+      matchResult = 1;
+    }
+    switch (matchResult) {
+      case 0:
+        return d;
+      default:
+        return void 0;
+    }
+  }
+  static tryGetDateCreatedAsDateTime(lp, context) {
+    const matchValue = lp.TryGetPropertyAsSingleton(LDComputationalWorkflow.dateCreated, unwrap(context));
+    let matchResult, n;
+    if (matchValue != null) {
+      if (value(matchValue) instanceof Date) {
+        matchResult = 0;
+        n = value(matchValue);
+      } else {
+        matchResult = 1;
+      }
+    } else {
+      matchResult = 1;
+    }
+    switch (matchResult) {
+      case 0:
+        return n;
+      default:
+        return void 0;
+    }
+  }
+  static setDateCreated(cw, date, context) {
+    return cw.SetProperty(LDComputationalWorkflow.dateCreated, date, unwrap(context));
+  }
+  static setDateCreatedAsDateTime(lp, dateCreated, context) {
+    return lp.SetProperty(LDComputationalWorkflow.dateCreated, dateCreated, unwrap(context));
+  }
+  static getLicenses(cw, graph, context) {
+    return cw.GetPropertyNodes(LDComputationalWorkflow.license, void 0, unwrap(graph), unwrap(context));
+  }
+  static setLicenses(cw, licenses, context) {
+    return cw.SetProperty(LDComputationalWorkflow.license, licenses, unwrap(context));
+  }
+  static tryGetNameAsString(cw, context) {
+    const matchValue = cw.TryGetPropertyAsSingleton(LDComputationalWorkflow.name, unwrap(context));
+    let matchResult, n;
+    if (matchValue != null) {
+      if (typeof value(matchValue) === "string") {
+        matchResult = 0;
+        n = value(matchValue);
+      } else {
+        matchResult = 1;
+      }
+    } else {
+      matchResult = 1;
+    }
+    switch (matchResult) {
+      case 0:
+        return n;
+      default:
+        return void 0;
+    }
+  }
+  static getNameAsString(cw, context) {
+    const matchValue = cw.TryGetPropertyAsSingleton(LDComputationalWorkflow.name, unwrap(context));
+    if (matchValue != null) {
+      if (typeof value(matchValue) === "string") {
+        const n = value(matchValue);
+        return n;
+      } else {
+        throw new Error(`property \`name\` of object with @id \`${cw.Id}\` was not a string`);
+      }
+    } else {
+      throw new Error(`Could not access property \`name\` of object with @id \`${cw.Id}\``);
+    }
+  }
+  static setNameAsString(cw, name, context) {
+    return cw.SetProperty(LDComputationalWorkflow.name, name, unwrap(context));
+  }
+  static getProgrammingLanguages(cw, graph, context) {
+    return cw.GetPropertyNodes(LDComputationalWorkflow.programmingLanguage, void 0, unwrap(graph), unwrap(context));
+  }
+  static setProgrammingLanguages(cw, programmingLanguages, context) {
+    return cw.SetProperty(LDComputationalWorkflow.programmingLanguage, programmingLanguages, unwrap(context));
+  }
+  static tryGetSdPublisher(cw, graph, context) {
+    let ldObject, context_1;
+    const matchValue = cw.TryGetPropertyAsSingleNode(LDComputationalWorkflow.sdPublisher, unwrap(graph), unwrap(context));
+    let matchResult, a_1;
+    if (matchValue != null) {
+      if (ldObject = value(matchValue), context_1 = context, LDPerson.validate(ldObject, unwrap(context_1)) ? true : LDOrganization.validate(ldObject, unwrap(context_1))) {
+        matchResult = 0;
+        a_1 = value(matchValue);
+      } else {
+        matchResult = 1;
+      }
+    } else {
+      matchResult = 1;
+    }
+    switch (matchResult) {
+      case 0:
+        return a_1;
+      default:
+        return void 0;
+    }
+  }
+  static setSdPublisher(cw, sdPublisher, context) {
+    return cw.SetProperty(LDComputationalWorkflow.sdPublisher, sdPublisher, unwrap(context));
+  }
+  static tryGetUrl(cw, context) {
+    const matchValue = cw.TryGetPropertyAsSingleton(LDComputationalWorkflow.url, unwrap(context));
+    let matchResult, u;
+    if (matchValue != null) {
+      if (typeof value(matchValue) === "string") {
+        matchResult = 0;
+        u = value(matchValue);
+      } else {
+        matchResult = 1;
+      }
+    } else {
+      matchResult = 1;
+    }
+    switch (matchResult) {
+      case 0:
+        return u;
+      default:
+        return void 0;
+    }
+  }
+  static setUrl(cw, url, context) {
+    return cw.SetProperty(LDComputationalWorkflow.url, url, unwrap(context));
+  }
+  static tryGetVersion(cw, context) {
+    const matchValue = cw.TryGetPropertyAsSingleton(LDComputationalWorkflow.version, unwrap(context));
+    let matchResult, v;
+    if (matchValue != null) {
+      if (typeof value(matchValue) === "string") {
+        matchResult = 0;
+        v = value(matchValue);
+      } else {
+        matchResult = 1;
+      }
+    } else {
+      matchResult = 1;
+    }
+    switch (matchResult) {
+      case 0:
+        return v;
+      default:
+        return void 0;
+    }
+  }
+  static setVersion(cw, version, context) {
+    return cw.SetProperty(LDComputationalWorkflow.version, version, unwrap(context));
+  }
+  static tryGetDescription(cw, context) {
+    const matchValue = cw.TryGetPropertyAsSingleton(LDComputationalWorkflow.description, unwrap(context));
+    let matchResult, d;
+    if (matchValue != null) {
+      if (typeof value(matchValue) === "string") {
+        matchResult = 0;
+        d = value(matchValue);
+      } else {
+        matchResult = 1;
+      }
+    } else {
+      matchResult = 1;
+    }
+    switch (matchResult) {
+      case 0:
+        return d;
+      default:
+        return void 0;
+    }
+  }
+  static setDescription(cw, description, context) {
+    return cw.SetProperty(LDComputationalWorkflow.description, description, unwrap(context));
+  }
+  static getHasPart(cw, graph, context) {
+    return cw.GetPropertyNodes(LDComputationalWorkflow.hasPart, void 0, unwrap(graph), unwrap(context));
+  }
+  static setHasPart(cw, hasParts, context) {
+    return cw.SetProperty(LDComputationalWorkflow.hasPart, Array.from(hasParts), unwrap(context));
+  }
+  static tryGetAdditionalTypeAsString(cw, context) {
+    const matchValue = cw.TryGetPropertyAsSingleton(LDComputationalWorkflow.additionalType, unwrap(context));
+    let matchResult, at;
+    if (matchValue != null) {
+      if (typeof value(matchValue) === "string") {
+        matchResult = 0;
+        at = value(matchValue);
+      } else {
+        matchResult = 1;
+      }
+    } else {
+      matchResult = 1;
+    }
+    switch (matchResult) {
+      case 0:
+        return at;
+      default:
+        return void 0;
+    }
+  }
+  static getAdditionalTypeAsString(cw, context) {
+    const matchValue = cw.TryGetPropertyAsSingleton(LDComputationalWorkflow.additionalType, unwrap(context));
+    if (matchValue != null) {
+      if (typeof value(matchValue) === "string") {
+        const at = value(matchValue);
+        return at;
+      } else {
+        throw new Error(`property \`additionalType\` of object with @id \`${cw.Id}\` was not a string`);
+      }
+    } else {
+      throw new Error(`Could not access property \`additionalType\` of object with @id \`${cw.Id}\``);
+    }
+  }
+  static setAdditionalTypeAsString(cw, additionalType, context) {
+    return cw.SetProperty(LDComputationalWorkflow.additionalType, additionalType, unwrap(context));
+  }
+  static getComments(cw, graph, context) {
+    return cw.GetPropertyNodes(LDComputationalWorkflow.comment, (ldObject, context_1) => LDComment.validate(ldObject, unwrap(context_1)), unwrap(graph), unwrap(context));
+  }
+  static setComments(cw, comments, context) {
+    return cw.SetProperty(LDComputationalWorkflow.comment, comments, unwrap(context));
+  }
+  static validate(lp, context) {
+    return lp.HasType(LDComputationalWorkflow.schemaType, unwrap(context));
+  }
+  static create(id, inputs, outputs, creator, dateCreated, licenses, name, programmingLanguages, sdPublisher, url, version, description, hasParts, comments, context) {
+    const cw = new LDNode(id == null ? clean(`#ComputationalWorkflow_${createMissingIdentifier()}`) : value(id), [LDComputationalWorkflow.schemaType], void 0, unwrap(context));
+    cw.SetOptionalProperty(LDComputationalWorkflow.input, inputs, unwrap(context));
+    cw.SetOptionalProperty(LDComputationalWorkflow.output, outputs, unwrap(context));
+    cw.SetOptionalProperty(LDComputationalWorkflow.creator, creator, unwrap(context));
+    cw.SetOptionalProperty(LDComputationalWorkflow.dateCreated, dateCreated, unwrap(context));
+    cw.SetOptionalProperty(LDComputationalWorkflow.license, licenses, unwrap(context));
+    cw.SetOptionalProperty(LDComputationalWorkflow.name, name, unwrap(context));
+    cw.SetOptionalProperty(LDComputationalWorkflow.programmingLanguage, programmingLanguages, unwrap(context));
+    cw.SetOptionalProperty(LDComputationalWorkflow.sdPublisher, sdPublisher, unwrap(context));
+    cw.SetOptionalProperty(LDComputationalWorkflow.url, url, unwrap(context));
+    cw.SetOptionalProperty(LDComputationalWorkflow.version, version, unwrap(context));
+    cw.SetOptionalProperty(LDComputationalWorkflow.description, description, unwrap(context));
+    cw.SetOptionalProperty(LDComputationalWorkflow.hasPart, hasParts, unwrap(context));
+    cw.SetOptionalProperty(LDComputationalWorkflow.comment, comments, unwrap(context));
+    return cw;
+  }
+}
+function LDComputationalWorkflow_$reflection() {
+  return class_type("ARCtrl.ROCrate.LDComputationalWorkflow", void 0, LDComputationalWorkflow);
+}
+
+export { LDComputationalWorkflow, LDComputationalWorkflow_$reflection };

package/dist/ts/ts/ROCrate/LDTypes/ComputerLanguage.d.ts

@@ -0,0 +1,39 @@
+import { Option } from '@fable-org/fable-library-js/Option.js';
+import { LDRef, LDNode } from '../LDObject.js';
+import { LDContext } from '../LDContext.js';
+import { TypeInfo } from '@fable-org/fable-library-js/Reflection.js';
+export declare class LDComputerLanguage {
+    constructor();
+    static get schemaType(): string;
+    static get name(): string;
+    static get alternateName(): string;
+    static get identifier(): string;
+    static get url(): string;
+    static get sameAs(): string;
+    static tryGetNameAsString(cl: LDNode, context?: LDContext): Option<string>;
+    static getNameAsString(cl: LDNode, context?: LDContext): string;
+    static setNameAsString<$d>(cl: LDNode, name: string, context?: LDContext): $d;
+    static tryGetAlternateNameAsString(cl: LDNode, context?: LDContext): Option<string>;
+    static getAlternateNameAsString(cl: LDNode, context?: LDContext): string;
+    static setAlternateNameAsString<$c>(cl: LDNode, alternateName: string, context?: LDContext): $c;
+    static tryGetIdentifierAsLDRef(cl: LDNode, context?: LDContext): Option<LDRef>;
+    static getIdentifierAsLDRef(cl: LDNode, context?: LDContext): LDRef;
+    static setIdentifierAsLDRef<$b>(cl: LDNode, identifier: LDRef, context?: LDContext): $b;
+    static tryGetUrlAsLDRef(cl: LDNode, context?: LDContext): Option<LDRef>;
+    static getUrlAsLDRef(cl: LDNode, context?: LDContext): LDRef;
+    static setUrlAsLDRef<$a>(cl: LDNode, url: LDRef, context?: LDContext): $a;
+    static validate(cl: LDNode, context?: LDContext): boolean;
+    static validateCWL(cl: LDNode, context?: LDContext): boolean;
+    static validateGalaxy(cl: LDNode, context?: LDContext): boolean;
+    static validateKNIME(cl: LDNode, context?: LDContext): boolean;
+    static validateNextflow(cl: LDNode, context?: LDContext): boolean;
+    static validateSnakemake(cl: LDNode, context?: LDContext): boolean;
+    static create(id: string, name?: string, alternateName?: string, identifier?: string, url?: string, context?: LDContext): LDNode;
+    static createCWL(context?: LDContext): LDNode;
+    static createGalaxy(context?: LDContext): LDNode;
+    static createKNIME(context?: LDContext): LDNode;
+    static createNextflow(context?: LDContext): LDNode;
+    static createSnakemake(context?: LDContext): LDNode;
+}
+export declare function LDComputerLanguage_$reflection(): TypeInfo;
+//# sourceMappingURL=ComputerLanguage.d.ts.map

package/dist/ts/ts/ROCrate/LDTypes/ComputerLanguage.d.ts.map

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