@nfdi4plants/arctrl 2.0.1 → 2.1.0-alpha.2

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (453) hide show
  1. package/ARC.js +43 -108
  2. package/Contract/ARC.js +1 -1
  3. package/Contract/ArcAssay.js +37 -14
  4. package/Contract/ArcInvestigation.js +4 -4
  5. package/Contract/ArcStudy.js +37 -14
  6. package/Contract/Contract.js +6 -6
  7. package/Contract/Datamap.js +5 -5
  8. package/Contract/Git.js +6 -6
  9. package/Contract/ValidationPackagesConfig.js +5 -5
  10. package/Core/ArcTypes.js +17 -17
  11. package/Core/Comment.js +16 -9
  12. package/Core/CommentList.js +6 -6
  13. package/Core/Conversion.js +64 -64
  14. package/Core/Data.js +11 -11
  15. package/Core/DataContext.js +4 -4
  16. package/Core/DataFile.js +2 -2
  17. package/Core/DataMap.js +4 -4
  18. package/Core/Helper/Collections.js +11 -11
  19. package/Core/Helper/HashCodes.js +5 -5
  20. package/Core/Helper/Identifier.js +9 -9
  21. package/Core/Helper/Regex.js +38 -38
  22. package/Core/Helper/SemVer.js +8 -8
  23. package/Core/OntologyAnnotation.js +11 -11
  24. package/Core/OntologySourceReference.js +4 -4
  25. package/Core/Person.js +11 -11
  26. package/Core/Process/ColumnIndex.js +7 -7
  27. package/Core/Process/Component.js +10 -10
  28. package/Core/Process/Factor.js +6 -6
  29. package/Core/Process/FactorValue.js +10 -10
  30. package/Core/Process/Material.js +5 -5
  31. package/Core/Process/MaterialAttribute.js +4 -4
  32. package/Core/Process/MaterialAttributeValue.js +10 -10
  33. package/Core/Process/MaterialType.js +2 -2
  34. package/Core/Process/Process.js +19 -19
  35. package/Core/Process/ProcessInput.js +16 -16
  36. package/Core/Process/ProcessOutput.js +16 -16
  37. package/Core/Process/ProcessParameterValue.js +10 -10
  38. package/Core/Process/ProcessSequence.js +6 -6
  39. package/Core/Process/Protocol.js +5 -5
  40. package/Core/Process/ProtocolParameter.js +4 -4
  41. package/Core/Process/Sample.js +5 -5
  42. package/Core/Process/Source.js +5 -5
  43. package/Core/Publication.js +10 -10
  44. package/Core/Table/ArcTable.js +35 -28
  45. package/Core/Table/ArcTableAux.js +22 -22
  46. package/Core/Table/ArcTables.js +14 -14
  47. package/Core/Table/CompositeCell.js +6 -6
  48. package/Core/Table/CompositeColumn.js +5 -5
  49. package/Core/Table/CompositeHeader.js +9 -9
  50. package/Core/Template.js +7 -7
  51. package/Core/Templates.js +8 -8
  52. package/Core/Value.js +11 -11
  53. package/FileSystem/Commit.js +2 -2
  54. package/FileSystem/FileSystem.js +4 -4
  55. package/FileSystem/FileSystemTree.js +14 -14
  56. package/FileSystem/Path.js +3 -3
  57. package/Json/ARC.js +21 -15
  58. package/Json/Assay.js +108 -169
  59. package/Json/Comment.js +84 -122
  60. package/Json/ConverterOptions.js +2 -2
  61. package/Json/Data.js +100 -107
  62. package/Json/DataFile.js +22 -57
  63. package/Json/DataMap/DataContext.js +25 -16
  64. package/Json/DataMap/DataMap.js +11 -7
  65. package/Json/Decode.js +11 -14
  66. package/Json/Encode.js +24 -13
  67. package/Json/IDTable.js +14 -3
  68. package/Json/Investigation.js +194 -176
  69. package/Json/OntologyAnnotation.js +113 -127
  70. package/Json/OntologySourceReference.js +93 -111
  71. package/Json/Person.js +204 -135
  72. package/Json/Process/AssayMaterials.js +12 -14
  73. package/Json/Process/Component.js +23 -68
  74. package/Json/Process/Factor.js +28 -46
  75. package/Json/Process/FactorValue.js +28 -50
  76. package/Json/Process/Material.js +56 -83
  77. package/Json/Process/MaterialAttribute.js +23 -45
  78. package/Json/Process/MaterialAttributeValue.js +28 -71
  79. package/Json/Process/MaterialType.js +17 -35
  80. package/Json/Process/Process.js +70 -85
  81. package/Json/Process/ProcessInput.js +18 -45
  82. package/Json/Process/ProcessOutput.js +15 -63
  83. package/Json/Process/ProcessParameterValue.js +21 -70
  84. package/Json/Process/Protocol.js +80 -83
  85. package/Json/Process/ProtocolParameter.js +23 -44
  86. package/Json/Process/Sample.js +66 -93
  87. package/Json/Process/Source.js +54 -81
  88. package/Json/Process/StudyMaterials.js +13 -15
  89. package/Json/Process/Value.js +19 -29
  90. package/Json/PropertyValue.js +86 -28
  91. package/Json/Publication.js +92 -115
  92. package/Json/ROCrateObject.js +146 -0
  93. package/Json/StringTable.js +27 -10
  94. package/Json/Study.js +193 -182
  95. package/Json/Table/ArcTable.js +119 -115
  96. package/Json/Table/CellTable.js +24 -11
  97. package/Json/Table/CompositeCell.js +40 -41
  98. package/Json/Table/CompositeHeader.js +24 -36
  99. package/Json/Table/IOType.js +9 -31
  100. package/Json/Table/OATable.js +23 -10
  101. package/Json/Table/Templates.js +82 -90
  102. package/Json/context/rocrate/isa_assay_context.js +60 -4
  103. package/Json/context/rocrate/isa_comment_context.js +28 -4
  104. package/Json/context/rocrate/isa_component_context.js +44 -4
  105. package/Json/context/rocrate/isa_data_context.js +40 -4
  106. package/Json/context/rocrate/isa_factor_context.js +40 -4
  107. package/Json/context/rocrate/isa_factor_value_context.js +52 -4
  108. package/Json/context/rocrate/isa_investigation_context.js +68 -4
  109. package/Json/context/rocrate/isa_material_attribute_context.js +32 -4
  110. package/Json/context/rocrate/isa_material_attribute_value_context.js +48 -4
  111. package/Json/context/rocrate/isa_material_context.js +36 -4
  112. package/Json/context/rocrate/isa_ontology_annotation_context.js +36 -4
  113. package/Json/context/rocrate/isa_ontology_source_reference_context.js +40 -4
  114. package/Json/context/rocrate/isa_organization_context.js +24 -4
  115. package/Json/context/rocrate/isa_person_context.js +85 -5
  116. package/Json/context/rocrate/isa_process_context.js +56 -4
  117. package/Json/context/rocrate/isa_process_parameter_value_context.js +48 -4
  118. package/Json/context/rocrate/isa_protocol_context.js +60 -4
  119. package/Json/context/rocrate/isa_protocol_parameter_context.js +32 -4
  120. package/Json/context/rocrate/isa_publication_context.js +44 -4
  121. package/Json/context/rocrate/isa_sample_context.js +32 -4
  122. package/Json/context/rocrate/isa_source_context.js +32 -4
  123. package/Json/context/rocrate/isa_study_context.js +72 -4
  124. package/Json/context/rocrate/property_value_context.js +58 -2
  125. package/Json/context/rocrate/rocrate_context.js +45 -5
  126. package/Json.js +12 -12
  127. package/JsonIO/ARC.js +31 -0
  128. package/JsonIO/Assay.js +99 -0
  129. package/JsonIO/Comment.js +73 -0
  130. package/JsonIO/Data.js +50 -0
  131. package/JsonIO/DataFile.js +49 -0
  132. package/JsonIO/DataMap/DataMap.js +29 -0
  133. package/JsonIO/Decode.js +4 -0
  134. package/JsonIO/Investigation.js +99 -0
  135. package/JsonIO/OntologyAnnotation.js +73 -0
  136. package/JsonIO/OntologySourceReference.js +73 -0
  137. package/JsonIO/Person.js +74 -0
  138. package/JsonIO/Process/Component.js +50 -0
  139. package/JsonIO/Process/Factor.js +28 -0
  140. package/JsonIO/Process/FactorValue.js +29 -0
  141. package/JsonIO/Process/Material.js +50 -0
  142. package/JsonIO/Process/MaterialAttribute.js +29 -0
  143. package/JsonIO/Process/MaterialAttributeValue.js +50 -0
  144. package/JsonIO/Process/MaterialType.js +28 -0
  145. package/JsonIO/Process/Process.js +50 -0
  146. package/JsonIO/Process/ProcessInput.js +29 -0
  147. package/JsonIO/Process/ProcessOutput.js +50 -0
  148. package/JsonIO/Process/ProcessParameterValue.js +50 -0
  149. package/{Json → JsonIO}/Process/ProcessSequence.js +16 -16
  150. package/JsonIO/Process/Protocol.js +50 -0
  151. package/JsonIO/Process/ProtocolParameter.js +28 -0
  152. package/JsonIO/Process/Sample.js +50 -0
  153. package/JsonIO/Process/Source.js +50 -0
  154. package/JsonIO/Process/StudyMaterials.js +22 -0
  155. package/JsonIO/Process/Value.js +23 -0
  156. package/JsonIO/Publication.js +74 -0
  157. package/JsonIO/ROCrateObject.js +146 -0
  158. package/JsonIO/Study.js +99 -0
  159. package/JsonIO/Table/ArcTable.js +82 -0
  160. package/JsonIO/Table/CompositeCell.js +28 -0
  161. package/JsonIO/Table/CompositeHeader.js +28 -0
  162. package/{Json → JsonIO}/Table/Compression.js +20 -10
  163. package/JsonIO/Table/IOType.js +28 -0
  164. package/JsonIO/Table/Templates.js +88 -0
  165. package/ROCrate/ISAProfile/Assay.js +32 -0
  166. package/ROCrate/ISAProfile/Data.js +28 -0
  167. package/ROCrate/ISAProfile/Dataset.js +18 -0
  168. package/ROCrate/ISAProfile/Investigation.js +35 -0
  169. package/ROCrate/ISAProfile/LabProcess.js +32 -0
  170. package/ROCrate/ISAProfile/LabProtocol.js +33 -0
  171. package/ROCrate/ISAProfile/Person.js +35 -0
  172. package/ROCrate/ISAProfile/PropertyValue.js +30 -0
  173. package/ROCrate/ISAProfile/Sample.js +27 -0
  174. package/ROCrate/ISAProfile/ScholarlyArticle.js +30 -0
  175. package/ROCrate/ISAProfile/Study.js +35 -0
  176. package/ROCrate/ROCrateObject.js +61 -0
  177. package/Spreadsheet/AnnotationTable/ArcTable.js +16 -16
  178. package/Spreadsheet/AnnotationTable/CompositeCell.js +2 -2
  179. package/Spreadsheet/AnnotationTable/CompositeColumn.js +7 -7
  180. package/Spreadsheet/AnnotationTable/CompositeHeader.js +25 -25
  181. package/Spreadsheet/ArcAssay.js +9 -9
  182. package/Spreadsheet/ArcInvestigation.js +14 -14
  183. package/Spreadsheet/ArcStudy.js +7 -7
  184. package/Spreadsheet/CollectionAux.js +11 -11
  185. package/Spreadsheet/DataMap.js +3 -3
  186. package/Spreadsheet/DataMapTable/DataMapColumn.js +6 -6
  187. package/Spreadsheet/DataMapTable/DataMapHeader.js +23 -23
  188. package/Spreadsheet/DataMapTable/DataMapTable.js +13 -13
  189. package/Spreadsheet/Metadata/Assays.js +11 -11
  190. package/Spreadsheet/Metadata/Comment.js +5 -5
  191. package/Spreadsheet/Metadata/Contacts.js +7 -7
  192. package/Spreadsheet/Metadata/Conversions.js +7 -7
  193. package/Spreadsheet/Metadata/DesignDescriptors.js +1 -1
  194. package/Spreadsheet/Metadata/Factors.js +8 -8
  195. package/Spreadsheet/Metadata/OntologyAnnotation.js +6 -6
  196. package/Spreadsheet/Metadata/OntologySourceReference.js +6 -6
  197. package/Spreadsheet/Metadata/Protocols.js +9 -9
  198. package/Spreadsheet/Metadata/Publication.js +7 -7
  199. package/Spreadsheet/Metadata/SparseTable.js +21 -21
  200. package/Spreadsheet/Metadata/Study.js +12 -12
  201. package/Spreadsheet/Template.js +21 -21
  202. package/Template.Web.js +6 -6
  203. package/ValidationPackages/ValidationPackage.js +6 -6
  204. package/ValidationPackages/ValidationPackagesConfig.js +9 -9
  205. package/WebRequest/WebRequest.Node.js +2 -2
  206. package/WebRequest/WebRequest.js +2 -2
  207. package/Xlsx.js +9 -9
  208. package/Yaml/Encode.js +1 -1
  209. package/Yaml/ValidationPackage.js +5 -5
  210. package/Yaml/ValidationPackagesConfig.js +5 -5
  211. package/fable_modules/DynamicObj.4.0.0/DynObj.fs +219 -0
  212. package/fable_modules/DynamicObj.4.0.0/DynObj.fs.js +209 -0
  213. package/fable_modules/DynamicObj.4.0.0/DynamicObj.fableproj +47 -0
  214. package/fable_modules/DynamicObj.4.0.0/DynamicObj.fs +310 -0
  215. package/fable_modules/DynamicObj.4.0.0/DynamicObj.fs.js +166 -0
  216. package/fable_modules/DynamicObj.4.0.0/FableJS.fs +162 -0
  217. package/fable_modules/DynamicObj.4.0.0/FableJS.fs.js +141 -0
  218. package/fable_modules/DynamicObj.4.0.0/FablePy.fs +215 -0
  219. package/fable_modules/DynamicObj.4.0.0/HashCodes.fs +46 -0
  220. package/fable_modules/DynamicObj.4.0.0/HashCodes.fs.js +43 -0
  221. package/fable_modules/DynamicObj.4.0.0/PropertyHelper.fs +33 -0
  222. package/fable_modules/DynamicObj.4.0.0/PropertyHelper.fs.js +21 -0
  223. package/fable_modules/DynamicObj.4.0.0/ReflectionUtils.fs +72 -0
  224. package/fable_modules/DynamicObj.4.0.0/ReflectionUtils.fs.js +86 -0
  225. package/fable_modules/{Thoth.Json.JavaScript.0.1.0/obj/Release → DynamicObj.4.0.0/obj/Debug}/netstandard2.0/.NETStandard,Version=v2.0.AssemblyAttributes.fs +1 -1
  226. package/fable_modules/DynamicObj.4.0.0/obj/Debug/netstandard2.0/DynamicObj.AssemblyInfo.fs +19 -0
  227. package/fable_modules/{Thoth.Json.Core.0.2.1/obj/Debug → DynamicObj.4.0.0/obj/Release}/netstandard2.0/.NETStandard,Version=v2.0.AssemblyAttributes.fs +1 -1
  228. package/fable_modules/DynamicObj.4.0.0/obj/Release/netstandard2.0/DynamicObj.AssemblyInfo.fs +19 -0
  229. package/fable_modules/Fable.Fetch.2.6.0/Fetch.fs.js +8 -8
  230. package/fable_modules/Fable.Promise.2.2.2/Promise.fs.js +6 -6
  231. package/fable_modules/Fable.SimpleHttp.3.5.0/Http.fs.js +11 -11
  232. package/fable_modules/Fable.SimpleHttp.3.5.0/Types.fs.js +4 -4
  233. package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/Cells/FsCell.fs.js +15 -15
  234. package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/Cells/FsCellsCollection.fs.js +11 -11
  235. package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/DSL/CellBuilder.fs.js +7 -7
  236. package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/DSL/ColumnBuilder.fs.js +4 -4
  237. package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/DSL/DSL.fs.js +3 -3
  238. package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/DSL/Expression.fs.js +1 -1
  239. package/fable_modules/FsSpreadsheet.6.3.0-alpha.4/DSL/Operators.fs.js +6 -0
  240. package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/DSL/RowBuilder.fs.js +4 -4
  241. package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/DSL/SheetBuilder.fs.js +4 -4
  242. package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/DSL/TableBuilder.fs.js +4 -4
  243. package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/DSL/Transform.fs.js +10 -10
  244. package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/DSL/Types.fs.js +6 -6
  245. package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/DSL/WorkbookBuilder.fs.js +4 -4
  246. package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/FsAddress.fs.js +11 -11
  247. package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/FsColumn.fs.js +5 -5
  248. package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/FsRow.fs.js +5 -5
  249. package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/FsSpreadsheet.fableproj +5 -5
  250. package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/FsWorkbook.fs.js +7 -7
  251. package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/FsWorksheet.fs.js +11 -11
  252. package/fable_modules/FsSpreadsheet.6.3.0-alpha.4/Json/Cell.fs.js +64 -0
  253. package/fable_modules/FsSpreadsheet.6.3.0-alpha.4/Json/Column.fs.js +39 -0
  254. package/fable_modules/FsSpreadsheet.6.3.0-alpha.4/Json/Row.fs.js +39 -0
  255. package/fable_modules/FsSpreadsheet.6.3.0-alpha.4/Json/Table.fs.js +30 -0
  256. package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/Json/Value.fs.js +38 -13
  257. package/fable_modules/FsSpreadsheet.6.3.0-alpha.4/Json/Workbook.fs.js +46 -0
  258. package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/Json/Worksheet.fs.js +33 -8
  259. package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/Ranges/FsRange.fs.js +4 -4
  260. package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/Ranges/FsRangeAddress.fs.js +4 -4
  261. package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/Ranges/FsRangeBase.fs.js +4 -4
  262. package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/Ranges/FsRangeColumn.fs.js +4 -4
  263. package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/Ranges/FsRangeRow.fs.js +2 -2
  264. package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/SheetBuilder.fs.js +10 -10
  265. package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/Tables/FsTable.fs.js +11 -11
  266. package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/Tables/FsTableField.fs.js +5 -5
  267. package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/Tables/FsTableRow.fs.js +2 -2
  268. package/fable_modules/{Thoth.Json.Core.0.2.1 → Thoth.Json.Core.0.4.0}/Decode.fs +67 -28
  269. package/fable_modules/{Thoth.Json.Core.0.2.1 → Thoth.Json.Core.0.4.0}/Decode.fs.js +79 -50
  270. package/fable_modules/{Thoth.Json.Core.0.2.1 → Thoth.Json.Core.0.4.0}/Encode.fs +139 -54
  271. package/fable_modules/Thoth.Json.Core.0.4.0/Encode.fs.js +192 -0
  272. package/fable_modules/Thoth.Json.Core.0.4.0/Thoth.Json.Core.fableproj +33 -0
  273. package/fable_modules/{Thoth.Json.Core.0.2.1 → Thoth.Json.Core.0.4.0}/Types.fs +12 -5
  274. package/fable_modules/{Thoth.Json.Core.0.2.1 → Thoth.Json.Core.0.4.0}/Types.fs.js +2 -2
  275. package/fable_modules/{Thoth.Json.JavaScript.0.1.0 → Thoth.Json.JavaScript.0.3.0}/Decode.fs +9 -0
  276. package/fable_modules/{Thoth.Json.JavaScript.0.1.0 → Thoth.Json.JavaScript.0.3.0}/Decode.fs.js +16 -2
  277. package/fable_modules/{Thoth.Json.JavaScript.0.1.0 → Thoth.Json.JavaScript.0.3.0}/Encode.fs +13 -5
  278. package/fable_modules/Thoth.Json.JavaScript.0.3.0/Encode.fs.js +58 -0
  279. package/fable_modules/Thoth.Json.JavaScript.0.3.0/Thoth.Json.JavaScript.fableproj +28 -0
  280. package/fable_modules/YAMLicious.0.0.1/Decode.fs.js +17 -17
  281. package/fable_modules/YAMLicious.0.0.1/Encode.fs.js +6 -6
  282. package/fable_modules/YAMLicious.0.0.1/Library.fs.js +1 -1
  283. package/fable_modules/YAMLicious.0.0.1/Persil.fs.js +4 -4
  284. package/fable_modules/YAMLicious.0.0.1/Preprocessing.fs.js +6 -6
  285. package/fable_modules/YAMLicious.0.0.1/Reader.fs.js +9 -9
  286. package/fable_modules/YAMLicious.0.0.1/RegexActivePatterns.fs.js +36 -36
  287. package/fable_modules/YAMLicious.0.0.1/Writer.fs.js +4 -4
  288. package/fable_modules/YAMLicious.0.0.1/YAMLiciousTypes.fs.js +6 -6
  289. package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Array.js +10 -10
  290. package/fable_modules/fable-library-js.4.22.0/Async.d.ts +27 -0
  291. package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Async.js +1 -7
  292. package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/AsyncBuilder.d.ts +13 -13
  293. package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/BigInt.js +4 -3
  294. package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/CHANGELOG.md +40 -1
  295. package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Choice.js +2 -2
  296. package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Date.js +4 -5
  297. package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Decimal.js +6 -6
  298. package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/List.js +31 -31
  299. package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/MailboxProcessor.d.ts +2 -2
  300. package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Map.js +10 -10
  301. package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/MutableMap.js +1 -1
  302. package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/MutableSet.js +1 -1
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  318. package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Util.js +0 -1
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  328. package/fable_modules/FsSpreadsheet.6.2.0/Json/Workbook.fs.js +0 -35
  329. package/fable_modules/Thoth.Json.Core.0.2.1/Encode.fs.js +0 -113
  330. package/fable_modules/Thoth.Json.Core.0.2.1/Thoth.Json.Core.fableproj +0 -28
  331. package/fable_modules/Thoth.Json.Core.0.2.1/obj/Debug/netstandard2.0/Thoth.Json.Core.AssemblyInfo.fs +0 -20
  332. package/fable_modules/Thoth.Json.JavaScript.0.1.0/Encode.fs.js +0 -45
  333. package/fable_modules/Thoth.Json.JavaScript.0.1.0/Thoth.Json.JavaScript.fableproj +0 -21
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  335. package/fable_modules/Thoth.Json.JavaScript.0.1.0/obj/Debug/netstandard2.0/Thoth.Json.JavaScript.AssemblyInfo.fs +0 -18
  336. package/fable_modules/Thoth.Json.JavaScript.0.1.0/obj/Release/netstandard2.0/Thoth.Json.JavaScript.AssemblyInfo.fs +0 -19
  337. package/fable_modules/fable-library-js.4.16.0/Async.d.ts +0 -32
  338. /package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/Cells/FsCell.fs +0 -0
  339. /package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/Cells/FsCellsCollection.fs +0 -0
  340. /package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/DSL/CellBuilder.fs +0 -0
  341. /package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/DSL/ColumnBuilder.fs +0 -0
  342. /package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/DSL/DSL.fs +0 -0
  343. /package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/DSL/Expression.fs +0 -0
  344. /package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/DSL/Operators.fs +0 -0
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  346. /package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/DSL/SheetBuilder.fs +0 -0
  347. /package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/DSL/TableBuilder.fs +0 -0
  348. /package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/DSL/Transform.fs +0 -0
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  355. /package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/FsWorksheet.fs +0 -0
  356. /package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/Json/Cell.fs +0 -0
  357. /package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/Json/Column.fs +0 -0
  358. /package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/Json/Row.fs +0 -0
  359. /package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/Json/Table.fs +0 -0
  360. /package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/Json/Value.fs +0 -0
  361. /package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/Json/Workbook.fs +0 -0
  362. /package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/Json/Worksheet.fs +0 -0
  363. /package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/Ranges/FsRange.fs +0 -0
  364. /package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/Ranges/FsRangeAddress.fs +0 -0
  365. /package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/Ranges/FsRangeBase.fs +0 -0
  366. /package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/Ranges/FsRangeColumn.fs +0 -0
  367. /package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/Ranges/FsRangeRow.fs +0 -0
  368. /package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/SheetBuilder.fs +0 -0
  369. /package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/Tables/FsTable.fs +0 -0
  370. /package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/Tables/FsTableField.fs +0 -0
  371. /package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/Tables/FsTableRow.fs +0 -0
  372. /package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/obj/Debug/netstandard2.0/.NETStandard,Version=v2.0.AssemblyAttributes.fs +0 -0
  373. /package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/obj/Debug/netstandard2.0/FsSpreadsheet.AssemblyInfo.fs +0 -0
  374. /package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/obj/Release/netstandard2.0/.NETStandard,Version=v2.0.AssemblyAttributes.fs +0 -0
  375. /package/fable_modules/{FsSpreadsheet.6.2.0 → FsSpreadsheet.6.3.0-alpha.4}/obj/Release/netstandard2.0/FsSpreadsheet.AssemblyInfo.fs +0 -0
  376. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Array.d.ts +0 -0
  377. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/AsyncBuilder.js +0 -0
  378. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/BigInt.d.ts +0 -0
  379. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/BitConverter.d.ts +0 -0
  380. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/BitConverter.js +0 -0
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  382. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Boolean.js +0 -0
  383. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Char.d.ts +0 -0
  384. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Char.js +0 -0
  385. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Choice.d.ts +0 -0
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  387. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/ConditionalWeakTable.js +0 -0
  388. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Date.d.ts +0 -0
  389. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/DateOffset.d.ts +0 -0
  390. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/DateOffset.js +0 -0
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  394. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Double.d.ts +0 -0
  395. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Double.js +0 -0
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  405. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/FSharp.Core.js +0 -0
  406. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Global.d.ts +0 -0
  407. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Global.js +0 -0
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  412. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/List.d.ts +0 -0
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  416. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Map.d.ts +0 -0
  417. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/MapUtil.d.ts +0 -0
  418. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/MapUtil.js +0 -0
  419. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/MutableMap.d.ts +0 -0
  420. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/MutableSet.d.ts +0 -0
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  426. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Observable.js +0 -0
  427. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Option.d.ts +0 -0
  428. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Option.js +0 -0
  429. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/README.md +0 -0
  430. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Random.d.ts +0 -0
  431. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Range.d.ts +0 -0
  432. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Reflection.js +0 -0
  433. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/RegExp.d.ts +0 -0
  434. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Result.d.ts +0 -0
  435. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Seq.d.ts +0 -0
  436. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Seq2.d.ts +0 -0
  437. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Seq2.js +0 -0
  438. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Set.d.ts +0 -0
  439. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/System.Collections.Generic.d.ts +0 -0
  440. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/System.Collections.Generic.js +0 -0
  441. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/System.Text.d.ts +0 -0
  442. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/SystemException.d.ts +0 -0
  443. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/SystemException.js +0 -0
  444. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/TimeOnly.d.ts +0 -0
  445. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/TimeOnly.js +0 -0
  446. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/TimeSpan.d.ts +0 -0
  447. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Timer.d.ts +0 -0
  448. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Timer.js +0 -0
  449. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Types.js +0 -0
  450. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Unicode.13.0.0.d.ts +0 -0
  451. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/Unicode.13.0.0.js +0 -0
  452. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/big.d.ts +0 -0
  453. /package/fable_modules/{fable-library-js.4.16.0 → fable-library-js.4.22.0}/lib/big.d.ts +0 -0
@@ -1,37 +1,48 @@
1
- import { ofArray, choose } from "../fable_modules/fable-library-js.4.16.0/List.js";
2
- import { equals } from "../fable_modules/fable-library-js.4.16.0/Util.js";
3
- import { Json } from "../fable_modules/Thoth.Json.Core.0.2.1/Types.fs.js";
4
- import { defaultSpaces, tryIncludeSeq, tryInclude } from "./Encode.js";
1
+ import { ofArray, choose } from "../fable_modules/fable-library-js.4.22.0/List.js";
2
+ import { unwrap, map } from "../fable_modules/fable-library-js.4.22.0/Option.js";
3
+ import { tryIncludeSeq, tryInclude } from "./Encode.js";
5
4
  import { OntologyAnnotation_ROCrate_decoderDefinedTerm, OntologyAnnotation_ROCrate_encoderDefinedTerm, OntologyAnnotation_decoder, OntologyAnnotation_encoder } from "./OntologyAnnotation.js";
6
- import { Comment_ISAJson_encoder, Comment_ROCrate_decoderDisambiguatingDescription, Comment_ROCrate_encoderDisambiguatingDescription, Comment_decoder, Comment_encoder } from "./Comment.js";
7
- import { string, object } from "../fable_modules/Thoth.Json.Core.0.2.1/Decode.fs.js";
5
+ import { ISAJson_encoder as ISAJson_encoder_1, ROCrate_decoderDisambiguatingDescription, ROCrate_encoderDisambiguatingDescription, decoder as decoder_2, encoder as encoder_1 } from "./Comment.js";
6
+ import { map as map_1 } from "../fable_modules/fable-library-js.4.22.0/Seq.js";
7
+ import { resizeArray, string, object } from "../fable_modules/Thoth.Json.Core.0.4.0/Decode.fs.js";
8
8
  import { Publication } from "../Core/Publication.js";
9
- import { defaultArg, unwrap } from "../fable_modules/fable-library-js.4.16.0/Option.js";
10
- import { Decode_noAdditionalProperties, Decode_resizeArray, Decode_uri } from "./Decode.js";
11
- import { printf, toText, replace } from "../fable_modules/fable-library-js.4.16.0/String.js";
12
- import { Person_ROCrate_decodeAuthorListString, Person_ROCrate_encodeAuthorListString } from "./Person.js";
9
+ import { Decode_noAdditionalProperties, Decode_uri } from "./Decode.js";
10
+ import { replace } from "../fable_modules/fable-library-js.4.22.0/String.js";
11
+ import { ROCrate_decodeAuthorListString, ROCrate_encodeAuthorListString } from "./Person.js";
13
12
  import { context_jsonvalue } from "./context/rocrate/isa_publication_context.js";
14
- import { fromString } from "../fable_modules/Thoth.Json.JavaScript.0.1.0/Decode.fs.js";
15
- import { toString } from "../fable_modules/Thoth.Json.JavaScript.0.1.0/Encode.fs.js";
16
13
 
17
- export function Publication_encoder(oa) {
18
- return new Json(5, [choose((tupledArg) => {
19
- const v = tupledArg[1];
20
- if (equals(v, new Json(3, []))) {
21
- return void 0;
22
- }
23
- else {
24
- return [tupledArg[0], v];
25
- }
26
- }, ofArray([tryInclude("pubMedID", (value) => (new Json(0, [value])), oa.PubMedID), tryInclude("doi", (value_2) => (new Json(0, [value_2])), oa.DOI), tryInclude("authorList", (value_4) => (new Json(0, [value_4])), oa.Authors), tryInclude("title", (value_6) => (new Json(0, [value_6])), oa.Title), tryInclude("status", OntologyAnnotation_encoder, oa.Status), tryIncludeSeq("comments", Comment_encoder, oa.Comments)]))]);
14
+ export function encoder(oa) {
15
+ const values = choose((tupledArg) => map((v_1) => [tupledArg[0], v_1], tupledArg[1]), ofArray([tryInclude("pubMedID", (value) => ({
16
+ Encode(helpers) {
17
+ return helpers.encodeString(value);
18
+ },
19
+ }), oa.PubMedID), tryInclude("doi", (value_2) => ({
20
+ Encode(helpers_1) {
21
+ return helpers_1.encodeString(value_2);
22
+ },
23
+ }), oa.DOI), tryInclude("authorList", (value_4) => ({
24
+ Encode(helpers_2) {
25
+ return helpers_2.encodeString(value_4);
26
+ },
27
+ }), oa.Authors), tryInclude("title", (value_6) => ({
28
+ Encode(helpers_3) {
29
+ return helpers_3.encodeString(value_6);
30
+ },
31
+ }), oa.Title), tryInclude("status", OntologyAnnotation_encoder, oa.Status), tryIncludeSeq("comments", encoder_1, oa.Comments)]));
32
+ return {
33
+ Encode(helpers_4) {
34
+ const arg = map_1((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_4)], values);
35
+ return helpers_4.encodeObject(arg);
36
+ },
37
+ };
27
38
  }
28
39
 
29
- export const Publication_decoder = object((get$) => {
40
+ export const decoder = object((get$) => {
30
41
  let objectArg, objectArg_1, objectArg_2, objectArg_3, objectArg_4, arg_11, objectArg_5;
31
- return new Publication(unwrap((objectArg = get$.Optional, objectArg.Field("pubMedID", Decode_uri))), unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("doi", string))), unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("authorList", string))), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("title", string))), unwrap((objectArg_4 = get$.Optional, objectArg_4.Field("status", OntologyAnnotation_decoder))), unwrap((arg_11 = Decode_resizeArray(Comment_decoder), (objectArg_5 = get$.Optional, objectArg_5.Field("comments", arg_11)))));
42
+ return new Publication(unwrap((objectArg = get$.Optional, objectArg.Field("pubMedID", Decode_uri))), unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("doi", string))), unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("authorList", string))), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("title", string))), unwrap((objectArg_4 = get$.Optional, objectArg_4.Field("status", OntologyAnnotation_decoder))), unwrap((arg_11 = resizeArray(decoder_2), (objectArg_5 = get$.Optional, objectArg_5.Field("comments", arg_11)))));
32
43
  });
33
44
 
34
- export function Publication_ROCrate_genID(p) {
45
+ export function ROCrate_genID(p) {
35
46
  const matchValue = p.DOI;
36
47
  if (matchValue == null) {
37
48
  const matchValue_1 = p.PubMedID;
@@ -53,103 +64,69 @@ export function Publication_ROCrate_genID(p) {
53
64
  }
54
65
  }
55
66
 
56
- export function Publication_ROCrate_encoder(oa) {
57
- return new Json(5, [choose((tupledArg) => {
58
- const v = tupledArg[1];
59
- if (equals(v, new Json(3, []))) {
60
- return void 0;
61
- }
62
- else {
63
- return [tupledArg[0], v];
64
- }
65
- }, ofArray([["@id", new Json(0, [Publication_ROCrate_genID(oa)])], ["@type", new Json(0, ["Publication"])], tryInclude("pubMedID", (value_2) => (new Json(0, [value_2])), oa.PubMedID), tryInclude("doi", (value_4) => (new Json(0, [value_4])), oa.DOI), tryInclude("authorList", Person_ROCrate_encodeAuthorListString, oa.Authors), tryInclude("title", (value_6) => (new Json(0, [value_6])), oa.Title), tryInclude("status", OntologyAnnotation_ROCrate_encoderDefinedTerm, oa.Status), tryIncludeSeq("comments", Comment_ROCrate_encoderDisambiguatingDescription, oa.Comments), ["@context", context_jsonvalue]]))]);
67
+ export function ROCrate_encoder(oa) {
68
+ let value;
69
+ const values = choose((tupledArg) => map((v_1) => [tupledArg[0], v_1], tupledArg[1]), ofArray([["@id", (value = ROCrate_genID(oa), {
70
+ Encode(helpers) {
71
+ return helpers.encodeString(value);
72
+ },
73
+ })], ["@type", {
74
+ Encode(helpers_1) {
75
+ return helpers_1.encodeString("Publication");
76
+ },
77
+ }], tryInclude("pubMedID", (value_2) => ({
78
+ Encode(helpers_2) {
79
+ return helpers_2.encodeString(value_2);
80
+ },
81
+ }), oa.PubMedID), tryInclude("doi", (value_4) => ({
82
+ Encode(helpers_3) {
83
+ return helpers_3.encodeString(value_4);
84
+ },
85
+ }), oa.DOI), tryInclude("authorList", ROCrate_encodeAuthorListString, oa.Authors), tryInclude("title", (value_6) => ({
86
+ Encode(helpers_4) {
87
+ return helpers_4.encodeString(value_6);
88
+ },
89
+ }), oa.Title), tryInclude("status", OntologyAnnotation_ROCrate_encoderDefinedTerm, oa.Status), tryIncludeSeq("comments", ROCrate_encoderDisambiguatingDescription, oa.Comments), ["@context", context_jsonvalue]]));
90
+ return {
91
+ Encode(helpers_5) {
92
+ const arg = map_1((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_5)], values);
93
+ return helpers_5.encodeObject(arg);
94
+ },
95
+ };
66
96
  }
67
97
 
68
- export const Publication_ROCrate_decoder = object((get$) => {
98
+ export const ROCrate_decoder = object((get$) => {
69
99
  let objectArg, objectArg_1, objectArg_2, objectArg_3, objectArg_4, arg_11, objectArg_5;
70
- return new Publication(unwrap((objectArg = get$.Optional, objectArg.Field("pubMedID", Decode_uri))), unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("doi", string))), unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("authorList", Person_ROCrate_decodeAuthorListString))), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("title", string))), unwrap((objectArg_4 = get$.Optional, objectArg_4.Field("status", OntologyAnnotation_ROCrate_decoderDefinedTerm))), unwrap((arg_11 = Decode_resizeArray(Comment_ROCrate_decoderDisambiguatingDescription), (objectArg_5 = get$.Optional, objectArg_5.Field("comments", arg_11)))));
100
+ return new Publication(unwrap((objectArg = get$.Optional, objectArg.Field("pubMedID", Decode_uri))), unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("doi", string))), unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("authorList", ROCrate_decodeAuthorListString))), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("title", string))), unwrap((objectArg_4 = get$.Optional, objectArg_4.Field("status", OntologyAnnotation_ROCrate_decoderDefinedTerm))), unwrap((arg_11 = resizeArray(ROCrate_decoderDisambiguatingDescription), (objectArg_5 = get$.Optional, objectArg_5.Field("comments", arg_11)))));
71
101
  });
72
102
 
73
- export function Publication_ISAJson_encoder(idMap, oa) {
74
- return new Json(5, [choose((tupledArg) => {
75
- const v = tupledArg[1];
76
- if (equals(v, new Json(3, []))) {
77
- return void 0;
78
- }
79
- else {
80
- return [tupledArg[0], v];
81
- }
82
- }, ofArray([tryInclude("pubMedID", (value) => (new Json(0, [value])), oa.PubMedID), tryInclude("doi", (value_2) => (new Json(0, [value_2])), oa.DOI), tryInclude("authorList", (value_4) => (new Json(0, [value_4])), oa.Authors), tryInclude("title", (value_6) => (new Json(0, [value_6])), oa.Title), tryInclude("status", OntologyAnnotation_encoder, oa.Status), tryIncludeSeq("comments", (comment) => Comment_ISAJson_encoder(idMap, comment), oa.Comments)]))]);
83
- }
84
-
85
- export const Publication_ISAJson_allowedFields = ofArray(["pubMedID", "doi", "authorList", "title", "status", "comments"]);
86
-
87
- export const Publication_ISAJson_decoder = Decode_noAdditionalProperties(Publication_ISAJson_allowedFields, Publication_decoder);
88
-
89
- export function ARCtrl_Publication__Publication_fromJsonString_Static_Z721C83C5(s) {
90
- const matchValue = fromString(Publication_decoder, s);
91
- if (matchValue.tag === 1) {
92
- throw new Error(toText(printf("Error decoding string: %O"))(matchValue.fields[0]));
93
- }
94
- else {
95
- return matchValue.fields[0];
96
- }
97
- }
98
-
99
- export function ARCtrl_Publication__Publication_toJsonString_Static_71136F3F(spaces) {
100
- return (obj) => {
101
- const value = Publication_encoder(obj);
102
- return toString(defaultSpaces(spaces), value);
103
+ export function ISAJson_encoder(idMap, oa) {
104
+ const values = choose((tupledArg) => map((v_1) => [tupledArg[0], v_1], tupledArg[1]), ofArray([tryInclude("pubMedID", (value) => ({
105
+ Encode(helpers) {
106
+ return helpers.encodeString(value);
107
+ },
108
+ }), oa.PubMedID), tryInclude("doi", (value_2) => ({
109
+ Encode(helpers_1) {
110
+ return helpers_1.encodeString(value_2);
111
+ },
112
+ }), oa.DOI), tryInclude("authorList", (value_4) => ({
113
+ Encode(helpers_2) {
114
+ return helpers_2.encodeString(value_4);
115
+ },
116
+ }), oa.Authors), tryInclude("title", (value_6) => ({
117
+ Encode(helpers_3) {
118
+ return helpers_3.encodeString(value_6);
119
+ },
120
+ }), oa.Title), tryInclude("status", OntologyAnnotation_encoder, oa.Status), tryIncludeSeq("comments", (comment) => ISAJson_encoder_1(idMap, comment), oa.Comments)]));
121
+ return {
122
+ Encode(helpers_4) {
123
+ const arg = map_1((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_4)], values);
124
+ return helpers_4.encodeObject(arg);
125
+ },
103
126
  };
104
127
  }
105
128
 
106
- export function ARCtrl_Publication__Publication_ToJsonString_71136F3F(this$, spaces) {
107
- return ARCtrl_Publication__Publication_toJsonString_Static_71136F3F(unwrap(spaces))(this$);
108
- }
109
-
110
- export function ARCtrl_Publication__Publication_fromROCrateJsonString_Static_Z721C83C5(s) {
111
- const matchValue = fromString(Publication_ROCrate_decoder, s);
112
- if (matchValue.tag === 1) {
113
- throw new Error(toText(printf("Error decoding string: %O"))(matchValue.fields[0]));
114
- }
115
- else {
116
- return matchValue.fields[0];
117
- }
118
- }
119
-
120
- /**
121
- * exports in json-ld format
122
- */
123
- export function ARCtrl_Publication__Publication_toROCrateJsonString_Static_71136F3F(spaces) {
124
- return (obj) => {
125
- const value = Publication_ROCrate_encoder(obj);
126
- return toString(defaultSpaces(spaces), value);
127
- };
128
- }
129
-
130
- export function ARCtrl_Publication__Publication_ToROCrateJsonString_71136F3F(this$, spaces) {
131
- return ARCtrl_Publication__Publication_toROCrateJsonString_Static_71136F3F(unwrap(spaces))(this$);
132
- }
133
-
134
- export function ARCtrl_Publication__Publication_fromISAJsonString_Static_Z721C83C5(s) {
135
- const matchValue = fromString(Publication_ISAJson_decoder, s);
136
- if (matchValue.tag === 1) {
137
- throw new Error(toText(printf("Error decoding string: %O"))(matchValue.fields[0]));
138
- }
139
- else {
140
- return matchValue.fields[0];
141
- }
142
- }
129
+ export const ISAJson_allowedFields = ofArray(["pubMedID", "doi", "authorList", "title", "status", "comments"]);
143
130
 
144
- export function ARCtrl_Publication__Publication_toISAJsonString_Static_Z3B036AA(spaces, useIDReferencing) {
145
- const idMap = defaultArg(useIDReferencing, false) ? (new Map([])) : void 0;
146
- return (obj) => {
147
- const value = Publication_ISAJson_encoder(idMap, obj);
148
- return toString(defaultSpaces(spaces), value);
149
- };
150
- }
151
-
152
- export function ARCtrl_Publication__Publication_ToISAJsonString_Z3B036AA(this$, spaces, useIDReferencing) {
153
- return ARCtrl_Publication__Publication_toISAJsonString_Static_Z3B036AA(unwrap(spaces), unwrap(useIDReferencing))(this$);
154
- }
131
+ export const ISAJson_decoder = Decode_noAdditionalProperties(ISAJson_allowedFields, decoder);
155
132
 
@@ -0,0 +1,146 @@
1
+ import { dateTime } from "./Encode.js";
2
+ import { ROCrateObject_$ctor_Z2FC25A28, ROCrateObject } from "../ROCrate/ROCrateObject.js";
3
+ import { int32ToString, disposeSafe, getEnumerator, isIterable, defaultOf, equals } from "../fable_modules/fable-library-js.4.22.0/Util.js";
4
+ import { list } from "../fable_modules/Thoth.Json.Core.0.4.0/Encode.fs.js";
5
+ import { enumerateFromFunctions, map, delay, toList } from "../fable_modules/fable-library-js.4.22.0/Seq.js";
6
+ import { decimal, int, map as map_1, oneOf, Getters$2__get_Errors, string, Getters$2_$ctor_Z4BE6C149 } from "../fable_modules/Thoth.Json.Core.0.4.0/Decode.fs.js";
7
+ import { ofArray, head, length, isEmpty } from "../fable_modules/fable-library-js.4.22.0/List.js";
8
+ import { ErrorReason$1 } from "../fable_modules/Thoth.Json.Core.0.4.0/Types.fs.js";
9
+ import { FSharpResult$2 } from "../fable_modules/fable-library-js.4.22.0/Result.js";
10
+ import { fold } from "../fable_modules/fable-library-js.4.22.0/Array.js";
11
+ import { Helpers_prependPath } from "./Decode.js";
12
+
13
+ export function genericEncoder(obj) {
14
+ if (typeof obj === "string") {
15
+ return {
16
+ Encode(helpers) {
17
+ return helpers.encodeString(obj);
18
+ },
19
+ };
20
+ }
21
+ else if (typeof obj === "number") {
22
+ return {
23
+ Encode(helpers_1) {
24
+ return helpers_1.encodeSignedIntegralNumber(obj);
25
+ },
26
+ };
27
+ }
28
+ else if (typeof obj === "boolean") {
29
+ return {
30
+ Encode(helpers_2) {
31
+ return helpers_2.encodeBool(obj);
32
+ },
33
+ };
34
+ }
35
+ else if (typeof obj === "number") {
36
+ return {
37
+ Encode(helpers_3) {
38
+ return helpers_3.encodeDecimalNumber(obj);
39
+ },
40
+ };
41
+ }
42
+ else if (obj instanceof Date) {
43
+ return dateTime(obj);
44
+ }
45
+ else if (obj instanceof ROCrateObject) {
46
+ return encoder(obj);
47
+ }
48
+ else if (equals(obj, defaultOf())) {
49
+ return {
50
+ Encode(helpers_4) {
51
+ return helpers_4.encodeNull();
52
+ },
53
+ };
54
+ }
55
+ else if (isIterable(obj)) {
56
+ const l = obj;
57
+ return list(toList(delay(() => map(genericEncoder, enumerateFromFunctions(() => getEnumerator(l), (enumerator) => enumerator["System.Collections.IEnumerator.MoveNext"](), (enumerator_1) => enumerator_1["System.Collections.IEnumerator.get_Current"]())))));
58
+ }
59
+ else {
60
+ throw new Error("Unknown type");
61
+ }
62
+ }
63
+
64
+ export function encoder(obj) {
65
+ const values = map((kv) => [kv[0], genericEncoder(obj)], obj.GetProperties(true));
66
+ return {
67
+ Encode(helpers) {
68
+ const arg = map((tupledArg) => [tupledArg[0], tupledArg[1].Encode(helpers)], values);
69
+ return helpers.encodeObject(arg);
70
+ },
71
+ };
72
+ }
73
+
74
+ export const decoder = (() => {
75
+ const decode = () => {
76
+ const decodeObject = {
77
+ Decode(helpers, value) {
78
+ let objectArg, objectArg_1, arg_5, objectArg_2;
79
+ if (helpers.isObject(value)) {
80
+ const getters = Getters$2_$ctor_Z4BE6C149(helpers, value);
81
+ const properties = helpers.getProperties(value);
82
+ let result;
83
+ const get$ = getters;
84
+ const o = ROCrateObject_$ctor_Z2FC25A28((objectArg = get$.Required, objectArg.Field("@id", string)), (objectArg_1 = get$.Required, objectArg_1.Field("@type", string)));
85
+ const enumerator = getEnumerator(properties);
86
+ try {
87
+ while (enumerator["System.Collections.IEnumerator.MoveNext"]()) {
88
+ const property = enumerator["System.Collections.Generic.IEnumerator`1.get_Current"]();
89
+ if ((property !== "@id") && (property !== "@type")) {
90
+ o.SetProperty(property, (arg_5 = decode(), (objectArg_2 = get$.Required, objectArg_2.Field(property, arg_5))));
91
+ }
92
+ }
93
+ }
94
+ finally {
95
+ disposeSafe(enumerator);
96
+ }
97
+ result = o;
98
+ const matchValue = Getters$2__get_Errors(getters);
99
+ if (!isEmpty(matchValue)) {
100
+ const errors = matchValue;
101
+ return (length(errors) > 1) ? (new FSharpResult$2(1, [["", new ErrorReason$1(7, [errors])]])) : (new FSharpResult$2(1, [head(matchValue)]));
102
+ }
103
+ else {
104
+ return new FSharpResult$2(0, [result]);
105
+ }
106
+ }
107
+ else {
108
+ return new FSharpResult$2(1, [["", new ErrorReason$1(0, ["an object", value])]]);
109
+ }
110
+ },
111
+ };
112
+ const resizeArray = {
113
+ Decode(helpers_1, value_1) {
114
+ if (helpers_1.isArray(value_1)) {
115
+ let i = -1;
116
+ return fold((acc, value_2) => {
117
+ let tupledArg;
118
+ i = ((i + 1) | 0);
119
+ if (acc.tag === 0) {
120
+ const acc_1 = acc.fields[0];
121
+ let matchValue_1;
122
+ let copyOfStruct = decode();
123
+ matchValue_1 = copyOfStruct.Decode(helpers_1, value_2);
124
+ if (matchValue_1.tag === 0) {
125
+ void (acc_1.push(matchValue_1.fields[0]));
126
+ return new FSharpResult$2(0, [acc_1]);
127
+ }
128
+ else {
129
+ return new FSharpResult$2(1, [(tupledArg = matchValue_1.fields[0], Helpers_prependPath((".[" + int32ToString(i)) + "]", tupledArg[0], tupledArg[1]))]);
130
+ }
131
+ }
132
+ else {
133
+ return acc;
134
+ }
135
+ }, new FSharpResult$2(0, [[]]), helpers_1.asArray(value_1));
136
+ }
137
+ else {
138
+ return new FSharpResult$2(1, [["", new ErrorReason$1(0, ["an array", value_1])]]);
139
+ }
140
+ },
141
+ };
142
+ return oneOf(ofArray([map_1((value_4) => value_4, decodeObject), map_1((value_5) => value_5, resizeArray), map_1((value_6) => value_6, string), map_1((value_7) => value_7, int), map_1((value_8) => value_8, decimal)]));
143
+ };
144
+ return decode();
145
+ })();
146
+
@@ -1,10 +1,9 @@
1
- import { item, map, setItem, fill } from "../fable_modules/fable-library-js.4.16.0/Array.js";
2
- import { iterate } from "../fable_modules/fable-library-js.4.16.0/Seq.js";
3
- import { Json } from "../fable_modules/Thoth.Json.Core.0.2.1/Types.fs.js";
4
- import { int, string, array as array_1 } from "../fable_modules/Thoth.Json.Core.0.2.1/Decode.fs.js";
1
+ import { item, map, setItem, fill } from "../fable_modules/fable-library-js.4.22.0/Array.js";
2
+ import { iterate } from "../fable_modules/fable-library-js.4.22.0/Seq.js";
3
+ import { int, string, array as array_2 } from "../fable_modules/Thoth.Json.Core.0.4.0/Decode.fs.js";
5
4
  import { Dictionary_tryFind } from "../Core/Helper/Collections.js";
6
- import { addToDict } from "../fable_modules/fable-library-js.4.16.0/MapUtil.js";
7
- import { FSharpResult$2 } from "../fable_modules/fable-library-js.4.16.0/Result.js";
5
+ import { addToDict } from "../fable_modules/fable-library-js.4.22.0/MapUtil.js";
6
+ import { FSharpResult$2 } from "../fable_modules/fable-library-js.4.22.0/Result.js";
8
7
 
9
8
  export function arrayFromMap(otm) {
10
9
  const a = fill(new Array(otm.size), 0, otm.size, "");
@@ -15,21 +14,39 @@ export function arrayFromMap(otm) {
15
14
  }
16
15
 
17
16
  export function encoder(ot) {
18
- return new Json(6, [map((value) => (new Json(0, [value])), ot)]);
17
+ const values = map((value) => ({
18
+ Encode(helpers) {
19
+ return helpers.encodeString(value);
20
+ },
21
+ }), ot);
22
+ return {
23
+ Encode(helpers_1) {
24
+ const arg = map((v) => v.Encode(helpers_1), values);
25
+ return helpers_1.encodeArray(arg);
26
+ },
27
+ };
19
28
  }
20
29
 
21
- export const decoder = array_1(string);
30
+ export const decoder = array_2(string);
22
31
 
23
32
  export function encodeString(otm, s) {
24
33
  const matchValue = Dictionary_tryFind(s, otm);
25
34
  if (matchValue == null) {
26
35
  const i_1 = otm.size | 0;
27
36
  addToDict(otm, s, i_1);
28
- return new Json(7, [i_1 >>> 0]);
37
+ return {
38
+ Encode(helpers_1) {
39
+ return helpers_1.encodeSignedIntegralNumber(i_1);
40
+ },
41
+ };
29
42
  }
30
43
  else {
31
44
  const i = matchValue | 0;
32
- return new Json(7, [i >>> 0]);
45
+ return {
46
+ Encode(helpers) {
47
+ return helpers.encodeSignedIntegralNumber(i);
48
+ },
49
+ };
33
50
  }
34
51
  }
35
52