@nfdi4plants/arctrl 2.0.0-beta.2 → 2.0.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/ARC.js +55 -18
- package/Contract/ArcAssay.js +4 -4
- package/Contract/ArcInvestigation.js +4 -4
- package/Contract/ArcStudy.js +3 -3
- package/Contract/Datamap.js +1 -1
- package/Contract/ValidationPackagesConfig.js +96 -0
- package/Core/ArcTypes.js +93 -90
- package/Core/Conversion.js +13 -13
- package/Core/DataContext.js +53 -6
- package/Core/{Table/DataMap.js → DataMap.js} +34 -22
- package/Core/Process/Component.js +15 -5
- package/Core/Process/FactorValue.js +14 -5
- package/Core/Process/MaterialAttributeValue.js +14 -5
- package/Core/Process/ProcessParameterValue.js +11 -2
- package/Core/Table/ArcTable.js +99 -11
- package/Core/Table/CompositeCell.js +38 -23
- package/Core/Table/CompositeColumn.js +7 -30
- package/Core/Table/CompositeHeader.js +5 -215
- package/Core/{Process/Value.js → Value.js} +9 -9
- package/Json/Assay.js +10 -9
- package/Json/{Process/Data.js → Data.js} +17 -17
- package/Json/{Process/DataFile.js → DataFile.js} +9 -9
- package/Json/DataMap/DataContext.js +30 -0
- package/Json/DataMap/DataMap.js +25 -0
- package/Json/Encode.js +10 -1
- package/Json/Process/Component.js +1 -1
- package/Json/Process/FactorValue.js +1 -1
- package/Json/Process/MaterialAttributeValue.js +1 -1
- package/Json/Process/ProcessInput.js +1 -1
- package/Json/Process/ProcessOutput.js +1 -1
- package/Json/Process/ProcessParameterValue.js +2 -2
- package/Json/Process/Value.js +3 -3
- package/Json/{Process/PropertyValue.js → PropertyValue.js} +30 -21
- package/Json/Study.js +9 -8
- package/Json/Table/CompositeCell.js +1 -1
- package/Json/context/rocrate/isa_data_context.js +1 -1
- package/Json/context/rocrate/isa_investigation_context.js +1 -1
- package/Json/context/rocrate/property_value_context.js +1 -1
- package/Spreadsheet/AnnotationTable/ArcTable.js +3 -2
- package/Spreadsheet/AnnotationTable/CompositeColumn.js +9 -7
- package/Spreadsheet/ArcAssay.js +62 -26
- package/Spreadsheet/ArcInvestigation.js +59 -38
- package/Spreadsheet/ArcStudy.js +51 -20
- package/Spreadsheet/DataMap.js +1 -1
- package/Spreadsheet/DataMapTable/DataMapTable.js +3 -3
- package/Spreadsheet/Template.js +1 -1
- package/ValidationPackages/ValidationPackage.js +61 -0
- package/ValidationPackages/ValidationPackagesConfig.js +88 -0
- package/Xlsx.js +9 -9
- package/Yaml/Encode.js +8 -0
- package/Yaml/ValidationPackage.js +47 -0
- package/Yaml/ValidationPackagesConfig.js +48 -0
- package/fable_modules/YAMLicious.0.0.1/Decode.fs +374 -0
- package/fable_modules/YAMLicious.0.0.1/Decode.fs.js +1684 -0
- package/fable_modules/YAMLicious.0.0.1/Encode.fs +148 -0
- package/fable_modules/YAMLicious.0.0.1/Encode.fs.js +74 -0
- package/fable_modules/YAMLicious.0.0.1/Interop/JsInterop.fs +14 -0
- package/fable_modules/YAMLicious.0.0.1/Interop/JsInterop.fs.js +11 -0
- package/fable_modules/YAMLicious.0.0.1/Interop/PyInterop.fs +9 -0
- package/fable_modules/YAMLicious.0.0.1/Library.fs +138 -0
- package/fable_modules/YAMLicious.0.0.1/Library.fs.js +7 -0
- package/fable_modules/YAMLicious.0.0.1/Persil.fs +86 -0
- package/fable_modules/YAMLicious.0.0.1/Persil.fs.js +49 -0
- package/fable_modules/YAMLicious.0.0.1/Preprocessing.fs +59 -0
- package/fable_modules/YAMLicious.0.0.1/Preprocessing.fs.js +102 -0
- package/fable_modules/YAMLicious.0.0.1/Reader.fs +295 -0
- package/fable_modules/YAMLicious.0.0.1/Reader.fs.js +530 -0
- package/fable_modules/YAMLicious.0.0.1/Regex.fs +108 -0
- package/fable_modules/YAMLicious.0.0.1/Regex.fs.js +19 -0
- package/fable_modules/YAMLicious.0.0.1/RegexActivePatterns.fs +166 -0
- package/fable_modules/YAMLicious.0.0.1/RegexActivePatterns.fs.js +225 -0
- package/fable_modules/YAMLicious.0.0.1/Writer.fs +84 -0
- package/fable_modules/YAMLicious.0.0.1/Writer.fs.js +161 -0
- package/fable_modules/YAMLicious.0.0.1/YAMLicious.fableproj +39 -0
- package/fable_modules/YAMLicious.0.0.1/YAMLiciousTypes.fs +82 -0
- package/fable_modules/YAMLicious.0.0.1/YAMLiciousTypes.fs.js +130 -0
- package/fable_modules/YAMLicious.0.0.1/obj/Debug/netstandard2.0/.NETStandard,Version=v2.0.AssemblyAttributes.fs +3 -0
- package/fable_modules/YAMLicious.0.0.1/obj/Debug/netstandard2.0/YAMLicious.AssemblyInfo.fs +19 -0
- package/fable_modules/YAMLicious.0.0.1/obj/Release/netstandard2.0/.NETStandard,Version=v2.0.AssemblyAttributes.fs +3 -0
- package/fable_modules/YAMLicious.0.0.1/obj/Release/netstandard2.0/YAMLicious.AssemblyInfo.fs +19 -0
- package/fable_modules/project_cracked.json +1 -1
- package/index.js +1 -0
- package/package.json +1 -1
package/Core/ArcTypes.js
CHANGED
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@@ -2,11 +2,12 @@ import { value as value_4, defaultArg, map, unwrap } from "../fable_modules/fabl
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import { collect, append as append_3, tryFind, removeAt, iterate, tryFindIndex, exists, choose, item, map as map_1, delay, toList, fold, length, forAll, contains, filter, toArray } from "../fable_modules/fable-library-js.4.16.0/Seq.js";
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import { defaultOf, safeHash, equals, disposeSafe, getEnumerator, stringHash } from "../fable_modules/fable-library-js.4.16.0/Util.js";
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import { ResizeArray_choose, ResizeArray_filter, ResizeArray_map } from "./Helper/Collections.js";
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-
import { DataMap__Copy } from "./
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import { DataMap__Copy } from "./DataMap.js";
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import { addRangeInPlace, removeInPlace, contains as contains_1 } from "../fable_modules/fable-library-js.4.16.0/Array.js";
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import { printf, toText } from "../fable_modules/fable-library-js.4.16.0/String.js";
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import { rangeDouble } from "../fable_modules/fable-library-js.4.16.0/Range.js";
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import { boxHashSeq, boxHashOption, boxHashArray } from "./Helper/HashCodes.js";
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import { checkValidCharacters } from "./Helper/Identifier.js";
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import { ArcTablesAux_applyIOMap, ArcTablesAux_getIOMap, ArcTables_$reflection, ArcTables } from "./Table/ArcTables.js";
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import { class_type } from "../fable_modules/fable-library-js.4.16.0/Reflection.js";
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import { Array_distinct } from "../fable_modules/fable-library-js.4.16.0/Seq2.js";
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@@ -15,16 +16,17 @@ import { FSharpRef } from "../fable_modules/fable-library-js.4.16.0/Types.js";
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export class ArcAssay extends ArcTables {
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constructor(identifier, measurementType, technologyType, technologyPlatform, tables, datamap, performers, comments) {
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super(defaultArg(tables, []));
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let identifier_1;
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const performers_1 = defaultArg(performers, []);
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const comments_1 = defaultArg(comments, []);
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this["identifier@109"] = identifier;
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this["identifier@109"] = ((identifier_1 = identifier.trim(), (checkValidCharacters(identifier_1), identifier_1)));
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this.investigation = void 0;
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this["measurementType@
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this["technologyType@
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this["technologyPlatform@
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this["measurementType@114"] = measurementType;
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this["technologyType@115"] = technologyType;
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this["technologyPlatform@116"] = technologyPlatform;
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this.dataMap = datamap;
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this["performers@
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this["comments@
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this["performers@118-1"] = performers_1;
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this["comments@119-1"] = comments_1;
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this.staticHash = 0;
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}
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get Identifier() {
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@@ -45,27 +47,27 @@ export class ArcAssay extends ArcTables {
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}
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get MeasurementType() {
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const this$ = this;
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return unwrap(this$["measurementType@
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return unwrap(this$["measurementType@114"]);
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}
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set MeasurementType(n) {
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const this$ = this;
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this$["measurementType@
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this$["measurementType@114"] = n;
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}
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get TechnologyType() {
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const this$ = this;
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return unwrap(this$["technologyType@
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return unwrap(this$["technologyType@115"]);
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}
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set TechnologyType(n) {
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const this$ = this;
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this$["technologyType@
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this$["technologyType@115"] = n;
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}
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get TechnologyPlatform() {
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const this$ = this;
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return unwrap(this$["technologyPlatform@
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return unwrap(this$["technologyPlatform@116"]);
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}
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set TechnologyPlatform(n) {
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const this$ = this;
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this$["technologyPlatform@
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this$["technologyPlatform@116"] = n;
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}
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get DataMap() {
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const this$ = this;
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@@ -77,19 +79,19 @@ export class ArcAssay extends ArcTables {
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}
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get Performers() {
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const this$ = this;
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return this$["performers@
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return this$["performers@118-1"];
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}
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set Performers(n) {
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const this$ = this;
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this$["performers@
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this$["performers@118-1"] = n;
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}
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get Comments() {
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const this$ = this;
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return this$["comments@
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return this$["comments@119-1"];
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}
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set Comments(n) {
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const this$ = this;
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this$["comments@
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this$["comments@119-1"] = n;
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}
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get StaticHash() {
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const this$ = this;
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@@ -614,32 +616,33 @@ export function ArcAssay_$ctor_Z4900C8CC(identifier, measurementType, technology
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export class ArcStudy extends ArcTables {
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constructor(identifier, title, description, submissionDate, publicReleaseDate, publications, contacts, studyDesignDescriptors, tables, datamap, registeredAssayIdentifiers, comments) {
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super(defaultArg(tables, []));
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let identifier_1;
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const publications_1 = defaultArg(publications, []);
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const contacts_1 = defaultArg(contacts, []);
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const studyDesignDescriptors_1 = defaultArg(studyDesignDescriptors, []);
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const registeredAssayIdentifiers_1 = defaultArg(registeredAssayIdentifiers, []);
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const comments_1 = defaultArg(comments, []);
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this["identifier@
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this["identifier@536"] = ((identifier_1 = identifier.trim(), (checkValidCharacters(identifier_1), identifier_1)));
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this.investigation = void 0;
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this["title@
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this["description@
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this["submissionDate@
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this["publicReleaseDate@
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this["publications@
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this["contacts@
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this["studyDesignDescriptors@
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this["datamap@
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this["registeredAssayIdentifiers@
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this["comments@
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this["title@541"] = title;
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this["description@542"] = description;
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this["submissionDate@543"] = submissionDate;
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this["publicReleaseDate@544"] = publicReleaseDate;
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this["publications@545-1"] = publications_1;
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this["contacts@546-1"] = contacts_1;
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this["studyDesignDescriptors@547-1"] = studyDesignDescriptors_1;
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this["datamap@548"] = datamap;
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this["registeredAssayIdentifiers@549-1"] = registeredAssayIdentifiers_1;
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this["comments@550-1"] = comments_1;
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this.staticHash = 0;
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}
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get Identifier() {
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const this$ = this;
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return this$["identifier@
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return this$["identifier@536"];
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}
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set Identifier(i) {
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const this$ = this;
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this$["identifier@
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this$["identifier@536"] = i;
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}
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get Investigation() {
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const this$ = this;
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}
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get Title() {
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const this$ = this;
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return unwrap(this$["title@
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return unwrap(this$["title@541"]);
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}
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set Title(n) {
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const this$ = this;
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this$["title@
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this$["title@541"] = n;
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}
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get Description() {
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const this$ = this;
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return unwrap(this$["description@
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return unwrap(this$["description@542"]);
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}
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set Description(n) {
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const this$ = this;
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this$["description@
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this$["description@542"] = n;
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}
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get SubmissionDate() {
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const this$ = this;
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return unwrap(this$["submissionDate@
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return unwrap(this$["submissionDate@543"]);
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}
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set SubmissionDate(n) {
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const this$ = this;
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this$["submissionDate@
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this$["submissionDate@543"] = n;
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}
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get PublicReleaseDate() {
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const this$ = this;
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return unwrap(this$["publicReleaseDate@
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return unwrap(this$["publicReleaseDate@544"]);
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}
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set PublicReleaseDate(n) {
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const this$ = this;
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this$["publicReleaseDate@
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this$["publicReleaseDate@544"] = n;
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}
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get Publications() {
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const this$ = this;
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return this$["publications@
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return this$["publications@545-1"];
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}
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set Publications(n) {
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const this$ = this;
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this$["publications@
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this$["publications@545-1"] = n;
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}
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get Contacts() {
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const this$ = this;
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return this$["contacts@
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return this$["contacts@546-1"];
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}
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set Contacts(n) {
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const this$ = this;
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this$["contacts@
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this$["contacts@546-1"] = n;
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}
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get StudyDesignDescriptors() {
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const this$ = this;
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return this$["studyDesignDescriptors@
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return this$["studyDesignDescriptors@547-1"];
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}
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set StudyDesignDescriptors(n) {
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const this$ = this;
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this$["studyDesignDescriptors@
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this$["studyDesignDescriptors@547-1"] = n;
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}
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get DataMap() {
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const this$ = this;
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return unwrap(this$["datamap@
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return unwrap(this$["datamap@548"]);
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}
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set DataMap(n) {
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const this$ = this;
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this$["datamap@
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this$["datamap@548"] = n;
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}
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get RegisteredAssayIdentifiers() {
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const this$ = this;
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return this$["registeredAssayIdentifiers@
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return this$["registeredAssayIdentifiers@549-1"];
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}
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set RegisteredAssayIdentifiers(n) {
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const this$ = this;
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this$["registeredAssayIdentifiers@
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this$["registeredAssayIdentifiers@549-1"] = n;
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}
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get Comments() {
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728
|
const this$ = this;
|
|
726
|
-
return this$["comments@
|
|
729
|
+
return this$["comments@550-1"];
|
|
727
730
|
}
|
|
728
731
|
set Comments(n) {
|
|
729
732
|
const this$ = this;
|
|
730
|
-
this$["comments@
|
|
733
|
+
this$["comments@550-1"] = n;
|
|
731
734
|
}
|
|
732
735
|
get StaticHash() {
|
|
733
736
|
const this$ = this;
|
|
@@ -1324,125 +1327,125 @@ export class ArcInvestigation {
|
|
|
1324
1327
|
const registeredStudyIdentifiers_1 = defaultArg(registeredStudyIdentifiers, []);
|
|
1325
1328
|
const comments_1 = defaultArg(comments, []);
|
|
1326
1329
|
const remarks_1 = defaultArg(remarks, []);
|
|
1327
|
-
this["identifier@
|
|
1328
|
-
this["title@
|
|
1329
|
-
this["description@
|
|
1330
|
-
this["submissionDate@
|
|
1331
|
-
this["publicReleaseDate@
|
|
1332
|
-
this["ontologySourceReferences@
|
|
1333
|
-
this["publications@
|
|
1334
|
-
this["contacts@
|
|
1335
|
-
this["assays@
|
|
1336
|
-
this["studies@
|
|
1337
|
-
this["registeredStudyIdentifiers@
|
|
1338
|
-
this["comments@
|
|
1339
|
-
this["remarks@
|
|
1330
|
+
this["identifier@1125"] = identifier;
|
|
1331
|
+
this["title@1126"] = title;
|
|
1332
|
+
this["description@1127"] = description;
|
|
1333
|
+
this["submissionDate@1128"] = submissionDate;
|
|
1334
|
+
this["publicReleaseDate@1129"] = publicReleaseDate;
|
|
1335
|
+
this["ontologySourceReferences@1130-1"] = ontologySourceReferences_1;
|
|
1336
|
+
this["publications@1131-1"] = publications_1;
|
|
1337
|
+
this["contacts@1132-1"] = contacts_1;
|
|
1338
|
+
this["assays@1133-1"] = assays_1;
|
|
1339
|
+
this["studies@1134-1"] = studies_1;
|
|
1340
|
+
this["registeredStudyIdentifiers@1135-1"] = registeredStudyIdentifiers_1;
|
|
1341
|
+
this["comments@1136-1"] = comments_1;
|
|
1342
|
+
this["remarks@1137-1"] = remarks_1;
|
|
1340
1343
|
this.staticHash = 0;
|
|
1341
|
-
this["init@
|
|
1344
|
+
this["init@1106"] = 1;
|
|
1342
1345
|
}
|
|
1343
1346
|
get Identifier() {
|
|
1344
1347
|
const this$ = this;
|
|
1345
|
-
return this$["identifier@
|
|
1348
|
+
return this$["identifier@1125"];
|
|
1346
1349
|
}
|
|
1347
1350
|
set Identifier(i) {
|
|
1348
1351
|
const this$ = this;
|
|
1349
|
-
this$["identifier@
|
|
1352
|
+
this$["identifier@1125"] = i;
|
|
1350
1353
|
}
|
|
1351
1354
|
get Title() {
|
|
1352
1355
|
const this$ = this;
|
|
1353
|
-
return unwrap(this$["title@
|
|
1356
|
+
return unwrap(this$["title@1126"]);
|
|
1354
1357
|
}
|
|
1355
1358
|
set Title(n) {
|
|
1356
1359
|
const this$ = this;
|
|
1357
|
-
this$["title@
|
|
1360
|
+
this$["title@1126"] = n;
|
|
1358
1361
|
}
|
|
1359
1362
|
get Description() {
|
|
1360
1363
|
const this$ = this;
|
|
1361
|
-
return unwrap(this$["description@
|
|
1364
|
+
return unwrap(this$["description@1127"]);
|
|
1362
1365
|
}
|
|
1363
1366
|
set Description(n) {
|
|
1364
1367
|
const this$ = this;
|
|
1365
|
-
this$["description@
|
|
1368
|
+
this$["description@1127"] = n;
|
|
1366
1369
|
}
|
|
1367
1370
|
get SubmissionDate() {
|
|
1368
1371
|
const this$ = this;
|
|
1369
|
-
return unwrap(this$["submissionDate@
|
|
1372
|
+
return unwrap(this$["submissionDate@1128"]);
|
|
1370
1373
|
}
|
|
1371
1374
|
set SubmissionDate(n) {
|
|
1372
1375
|
const this$ = this;
|
|
1373
|
-
this$["submissionDate@
|
|
1376
|
+
this$["submissionDate@1128"] = n;
|
|
1374
1377
|
}
|
|
1375
1378
|
get PublicReleaseDate() {
|
|
1376
1379
|
const this$ = this;
|
|
1377
|
-
return unwrap(this$["publicReleaseDate@
|
|
1380
|
+
return unwrap(this$["publicReleaseDate@1129"]);
|
|
1378
1381
|
}
|
|
1379
1382
|
set PublicReleaseDate(n) {
|
|
1380
1383
|
const this$ = this;
|
|
1381
|
-
this$["publicReleaseDate@
|
|
1384
|
+
this$["publicReleaseDate@1129"] = n;
|
|
1382
1385
|
}
|
|
1383
1386
|
get OntologySourceReferences() {
|
|
1384
1387
|
const this$ = this;
|
|
1385
|
-
return this$["ontologySourceReferences@
|
|
1388
|
+
return this$["ontologySourceReferences@1130-1"];
|
|
1386
1389
|
}
|
|
1387
1390
|
set OntologySourceReferences(n) {
|
|
1388
1391
|
const this$ = this;
|
|
1389
|
-
this$["ontologySourceReferences@
|
|
1392
|
+
this$["ontologySourceReferences@1130-1"] = n;
|
|
1390
1393
|
}
|
|
1391
1394
|
get Publications() {
|
|
1392
1395
|
const this$ = this;
|
|
1393
|
-
return this$["publications@
|
|
1396
|
+
return this$["publications@1131-1"];
|
|
1394
1397
|
}
|
|
1395
1398
|
set Publications(n) {
|
|
1396
1399
|
const this$ = this;
|
|
1397
|
-
this$["publications@
|
|
1400
|
+
this$["publications@1131-1"] = n;
|
|
1398
1401
|
}
|
|
1399
1402
|
get Contacts() {
|
|
1400
1403
|
const this$ = this;
|
|
1401
|
-
return this$["contacts@
|
|
1404
|
+
return this$["contacts@1132-1"];
|
|
1402
1405
|
}
|
|
1403
1406
|
set Contacts(n) {
|
|
1404
1407
|
const this$ = this;
|
|
1405
|
-
this$["contacts@
|
|
1408
|
+
this$["contacts@1132-1"] = n;
|
|
1406
1409
|
}
|
|
1407
1410
|
get Assays() {
|
|
1408
1411
|
const this$ = this;
|
|
1409
|
-
return this$["assays@
|
|
1412
|
+
return this$["assays@1133-1"];
|
|
1410
1413
|
}
|
|
1411
1414
|
set Assays(n) {
|
|
1412
1415
|
const this$ = this;
|
|
1413
|
-
this$["assays@
|
|
1416
|
+
this$["assays@1133-1"] = n;
|
|
1414
1417
|
}
|
|
1415
1418
|
get Studies() {
|
|
1416
1419
|
const this$ = this;
|
|
1417
|
-
return this$["studies@
|
|
1420
|
+
return this$["studies@1134-1"];
|
|
1418
1421
|
}
|
|
1419
1422
|
set Studies(n) {
|
|
1420
1423
|
const this$ = this;
|
|
1421
|
-
this$["studies@
|
|
1424
|
+
this$["studies@1134-1"] = n;
|
|
1422
1425
|
}
|
|
1423
1426
|
get RegisteredStudyIdentifiers() {
|
|
1424
1427
|
const this$ = this;
|
|
1425
|
-
return this$["registeredStudyIdentifiers@
|
|
1428
|
+
return this$["registeredStudyIdentifiers@1135-1"];
|
|
1426
1429
|
}
|
|
1427
1430
|
set RegisteredStudyIdentifiers(n) {
|
|
1428
1431
|
const this$ = this;
|
|
1429
|
-
this$["registeredStudyIdentifiers@
|
|
1432
|
+
this$["registeredStudyIdentifiers@1135-1"] = n;
|
|
1430
1433
|
}
|
|
1431
1434
|
get Comments() {
|
|
1432
1435
|
const this$ = this;
|
|
1433
|
-
return this$["comments@
|
|
1436
|
+
return this$["comments@1136-1"];
|
|
1434
1437
|
}
|
|
1435
1438
|
set Comments(n) {
|
|
1436
1439
|
const this$ = this;
|
|
1437
|
-
this$["comments@
|
|
1440
|
+
this$["comments@1136-1"] = n;
|
|
1438
1441
|
}
|
|
1439
1442
|
get Remarks() {
|
|
1440
1443
|
const this$ = this;
|
|
1441
|
-
return this$["remarks@
|
|
1444
|
+
return this$["remarks@1137-1"];
|
|
1442
1445
|
}
|
|
1443
1446
|
set Remarks(n) {
|
|
1444
1447
|
const this$ = this;
|
|
1445
|
-
this$["remarks@
|
|
1448
|
+
this$["remarks@1137-1"] = n;
|
|
1446
1449
|
}
|
|
1447
1450
|
get StaticHash() {
|
|
1448
1451
|
const this$ = this;
|
package/Core/Conversion.js
CHANGED
|
@@ -3,14 +3,14 @@ import { Comment$ } from "./Comment.js";
|
|
|
3
3
|
import { zip as zip_1, fold, empty as empty_1, singleton as singleton_1, append, delay, map as map_1, filter, toList, indexed, tryPick, choose } from "../fable_modules/fable-library-js.4.16.0/Seq.js";
|
|
4
4
|
import { unwrap, value as value_10, map, defaultArg } from "../fable_modules/fable-library-js.4.16.0/Option.js";
|
|
5
5
|
import { Option_fromValueWithDefault, ResizeArray_filter } from "./Helper/Collections.js";
|
|
6
|
-
import { Value as Value_2 } from "./
|
|
7
|
-
import {
|
|
6
|
+
import { Value as Value_2 } from "./Value.js";
|
|
7
|
+
import { Component_create_Z2F0B38C7 } from "./Process/Component.js";
|
|
8
8
|
import { ProtocolParameter } from "./Process/ProtocolParameter.js";
|
|
9
9
|
import { ProcessParameterValue } from "./Process/ProcessParameterValue.js";
|
|
10
|
-
import {
|
|
10
|
+
import { FactorValue_create_30BDC49 } from "./Process/FactorValue.js";
|
|
11
11
|
import { Factor } from "./Process/Factor.js";
|
|
12
12
|
import { toString } from "../fable_modules/fable-library-js.4.16.0/Types.js";
|
|
13
|
-
import {
|
|
13
|
+
import { MaterialAttributeValue_create_ZE1D108D } from "./Process/MaterialAttributeValue.js";
|
|
14
14
|
import { MaterialAttribute_create_A220A8A } from "./Process/MaterialAttribute.js";
|
|
15
15
|
import { ProcessInput_getCharacteristicValues_5B3D5BA9, ProcessInput__isMaterial, ProcessInput__isData, ProcessInput_setCharacteristicValues, ProcessInput__get_Name, ProcessInput__isSource, ProcessInput__isSample, ProcessInput, ProcessInput_createSource_Z5E00540E, ProcessInput_createRawData_Z721C83C5, ProcessInput_createMaterial_4452CB4C, ProcessInput_createSample_Z598187B7 } from "./Process/ProcessInput.js";
|
|
16
16
|
import { ProcessOutput_getFactorValues_Z42C11600, ProcessOutput__isMaterial, ProcessOutput__isData, ProcessOutput_setFactorValues, ProcessOutput__get_Name, ProcessOutput__isSample, ProcessOutput, ProcessOutput_createRawData_Z721C83C5, ProcessOutput_createMaterial_4452CB4C, ProcessOutput_createSample_Z598187B7 } from "./Process/ProcessOutput.js";
|
|
@@ -143,7 +143,7 @@ export function JsonTypes_valueOfCell(value) {
|
|
|
143
143
|
*/
|
|
144
144
|
export function JsonTypes_composeComponent(header, value) {
|
|
145
145
|
const patternInput = JsonTypes_valueOfCell(value);
|
|
146
|
-
return
|
|
146
|
+
return Component_create_Z2F0B38C7(unwrap(patternInput[0]), unwrap(patternInput[1]), header.ToTerm());
|
|
147
147
|
}
|
|
148
148
|
|
|
149
149
|
/**
|
|
@@ -160,7 +160,7 @@ export function JsonTypes_composeParameterValue(header, value) {
|
|
|
160
160
|
*/
|
|
161
161
|
export function JsonTypes_composeFactorValue(header, value) {
|
|
162
162
|
const patternInput = JsonTypes_valueOfCell(value);
|
|
163
|
-
return
|
|
163
|
+
return FactorValue_create_30BDC49(void 0, Factor.create(toString(header), header.ToTerm()), unwrap(patternInput[0]), unwrap(patternInput[1]));
|
|
164
164
|
}
|
|
165
165
|
|
|
166
166
|
/**
|
|
@@ -168,7 +168,7 @@ export function JsonTypes_composeFactorValue(header, value) {
|
|
|
168
168
|
*/
|
|
169
169
|
export function JsonTypes_composeCharacteristicValue(header, value) {
|
|
170
170
|
const patternInput = JsonTypes_valueOfCell(value);
|
|
171
|
-
return
|
|
171
|
+
return MaterialAttributeValue_create_ZE1D108D(void 0, MaterialAttribute_create_A220A8A(void 0, header.ToTerm()), unwrap(patternInput[0]), unwrap(patternInput[1]));
|
|
172
172
|
}
|
|
173
173
|
|
|
174
174
|
export function JsonTypes_composeFreetextMaterialName(headerFT, name) {
|
|
@@ -854,7 +854,7 @@ export function ARCtrl_CompositeHeader__CompositeHeader_TryCharacteristic(this$)
|
|
|
854
854
|
|
|
855
855
|
export function ARCtrl_CompositeHeader__CompositeHeader_TryComponent(this$) {
|
|
856
856
|
if (this$.tag === 0) {
|
|
857
|
-
return
|
|
857
|
+
return Component_create_Z2F0B38C7(void 0, void 0, this$.fields[0]);
|
|
858
858
|
}
|
|
859
859
|
else {
|
|
860
860
|
return void 0;
|
|
@@ -864,7 +864,7 @@ export function ARCtrl_CompositeHeader__CompositeHeader_TryComponent(this$) {
|
|
|
864
864
|
/**
|
|
865
865
|
* This function is used to improve interoperability with ISA-JSON types. It is not recommended for default ARCtrl usage.
|
|
866
866
|
*/
|
|
867
|
-
export function
|
|
867
|
+
export function ARCtrl_CompositeCell__CompositeCell_fromValue_Static_Z6986DF18(value, unit) {
|
|
868
868
|
return JsonTypes_cellOfValue(value, unit);
|
|
869
869
|
}
|
|
870
870
|
|
|
@@ -964,9 +964,9 @@ export function CompositeRow_toProtocol(tableName, row) {
|
|
|
964
964
|
case 5:
|
|
965
965
|
return Protocol_addParameter(ProtocolParameter.create(void 0, oa_1), p);
|
|
966
966
|
case 6:
|
|
967
|
-
return Protocol_addComponent(
|
|
967
|
+
return Protocol_addComponent(Component_create_Z2F0B38C7(Value_2.fromString(v_4), unit, oa_2), p);
|
|
968
968
|
case 7:
|
|
969
|
-
return Protocol_addComponent(
|
|
969
|
+
return Protocol_addComponent(Component_create_Z2F0B38C7(new Value_2(0, [t]), void 0, oa_3), p);
|
|
970
970
|
default:
|
|
971
971
|
return p;
|
|
972
972
|
}
|
|
@@ -994,7 +994,7 @@ export function ARCtrl_ArcTable__ArcTable_fromProtocol_Static_3BF20962(p) {
|
|
|
994
994
|
try {
|
|
995
995
|
while (enumerator_1["System.Collections.IEnumerator.MoveNext"]()) {
|
|
996
996
|
const c = enumerator_1["System.Collections.Generic.IEnumerator`1.get_Current"]();
|
|
997
|
-
const v_1 = map((arg) => singleton_2(
|
|
997
|
+
const v_1 = map((arg) => singleton_2(ARCtrl_CompositeCell__CompositeCell_fromValue_Static_Z6986DF18(arg, unwrap(c.ComponentUnit))), c.ComponentValue);
|
|
998
998
|
t.AddColumn(new CompositeHeader(3, [value_10(c.ComponentType)]), v_1, ARCtrl_Process_Component__Component_TryGetColumnIndex(c));
|
|
999
999
|
}
|
|
1000
1000
|
}
|
|
@@ -1040,7 +1040,7 @@ export function ARCtrl_ArcTable__ArcTable_GetProtocols(this$) {
|
|
|
1040
1040
|
case 3:
|
|
1041
1041
|
return Protocol_addParameter(ProtocolParameter.create(void 0, h.fields[0]), p);
|
|
1042
1042
|
case 0:
|
|
1043
|
-
return Protocol_addComponent(
|
|
1043
|
+
return Protocol_addComponent(Component_create_Z2F0B38C7(void 0, void 0, h.fields[0]), p);
|
|
1044
1044
|
default:
|
|
1045
1045
|
return p;
|
|
1046
1046
|
}
|
package/Core/DataContext.js
CHANGED
|
@@ -1,33 +1,63 @@
|
|
|
1
1
|
import { hash, boxHashSeq, boxHashOption, boxHashArray } from "./Helper/HashCodes.js";
|
|
2
|
+
import { unwrap, map } from "../fable_modules/fable-library-js.4.16.0/Option.js";
|
|
3
|
+
import { Value as Value_1 } from "./Value.js";
|
|
2
4
|
import { Data_$reflection, Data } from "./Data.js";
|
|
3
|
-
import { unwrap } from "../fable_modules/fable-library-js.4.16.0/Option.js";
|
|
4
5
|
import { class_type } from "../fable_modules/fable-library-js.4.16.0/Reflection.js";
|
|
6
|
+
import { OntologyAnnotation } from "./OntologyAnnotation.js";
|
|
5
7
|
|
|
6
8
|
export class DataContext extends Data {
|
|
7
|
-
constructor(id, name, dataType, format, selectorFormat, explication, unit, objectType, description, generatedBy, comments) {
|
|
9
|
+
constructor(id, name, dataType, format, selectorFormat, explication, unit, objectType, label, description, generatedBy, comments) {
|
|
8
10
|
super(unwrap(id), unwrap(name), unwrap(dataType), unwrap(format), unwrap(selectorFormat), unwrap(comments));
|
|
9
11
|
this._explication = explication;
|
|
10
12
|
this._unit = unit;
|
|
11
13
|
this._objectType = objectType;
|
|
14
|
+
this._label = label;
|
|
12
15
|
this._description = description;
|
|
13
16
|
this._generatedBy = generatedBy;
|
|
14
17
|
}
|
|
15
18
|
GetHashCode() {
|
|
16
19
|
const this$ = this;
|
|
17
|
-
return boxHashArray([boxHashOption(this$.ID), boxHashOption(this$.Name), boxHashOption(this$.DataType), boxHashOption(this$.Format), boxHashOption(this$.SelectorFormat), boxHashSeq(this$.Comments), boxHashOption(DataContext__get_Explication(this$)), boxHashOption(DataContext__get_Unit(this$)), boxHashOption(DataContext__get_ObjectType(this$)), boxHashOption(DataContext__get_Description(this$)), boxHashOption(DataContext__get_GeneratedBy(this$))]) | 0;
|
|
20
|
+
return boxHashArray([boxHashOption(this$.ID), boxHashOption(this$.Name), boxHashOption(this$.DataType), boxHashOption(this$.Format), boxHashOption(this$.SelectorFormat), boxHashSeq(this$.Comments), boxHashOption(DataContext__get_Explication(this$)), boxHashOption(DataContext__get_Unit(this$)), boxHashOption(DataContext__get_ObjectType(this$)), boxHashOption(DataContext__get_Label(this$)), boxHashOption(DataContext__get_Description(this$)), boxHashOption(DataContext__get_GeneratedBy(this$))]) | 0;
|
|
18
21
|
}
|
|
19
22
|
Equals(obj) {
|
|
20
23
|
const this$ = this;
|
|
21
24
|
return hash(this$) === hash(obj);
|
|
22
25
|
}
|
|
26
|
+
AlternateName() {
|
|
27
|
+
const this$ = this;
|
|
28
|
+
return DataContext__get_Label(this$);
|
|
29
|
+
}
|
|
30
|
+
MeasurementMethod() {
|
|
31
|
+
const this$ = this;
|
|
32
|
+
return DataContext__get_GeneratedBy(this$);
|
|
33
|
+
}
|
|
34
|
+
GetCategory() {
|
|
35
|
+
const this$ = this;
|
|
36
|
+
return DataContext__get_Explication(this$);
|
|
37
|
+
}
|
|
38
|
+
GetValue() {
|
|
39
|
+
const this$ = this;
|
|
40
|
+
return map((Item) => (new Value_1(0, [Item])), DataContext__get_ObjectType(this$));
|
|
41
|
+
}
|
|
42
|
+
GetUnit() {
|
|
43
|
+
const this$ = this;
|
|
44
|
+
return DataContext__get_Unit(this$);
|
|
45
|
+
}
|
|
46
|
+
GetAdditionalType() {
|
|
47
|
+
return "DataContext";
|
|
48
|
+
}
|
|
49
|
+
Description() {
|
|
50
|
+
const this$ = this;
|
|
51
|
+
return DataContext__get_Description(this$);
|
|
52
|
+
}
|
|
23
53
|
}
|
|
24
54
|
|
|
25
55
|
export function DataContext_$reflection() {
|
|
26
56
|
return class_type("ARCtrl.DataContext", void 0, DataContext, Data_$reflection());
|
|
27
57
|
}
|
|
28
58
|
|
|
29
|
-
export function DataContext_$
|
|
30
|
-
return new DataContext(id, name, dataType, format, selectorFormat, explication, unit, objectType, description, generatedBy, comments);
|
|
59
|
+
export function DataContext_$ctor_Z780A8A2A(id, name, dataType, format, selectorFormat, explication, unit, objectType, label, description, generatedBy, comments) {
|
|
60
|
+
return new DataContext(id, name, dataType, format, selectorFormat, explication, unit, objectType, label, description, generatedBy, comments);
|
|
31
61
|
}
|
|
32
62
|
|
|
33
63
|
export function DataContext__get_Explication(this$) {
|
|
@@ -54,6 +84,14 @@ export function DataContext__set_ObjectType_279AAFF2(this$, objectType) {
|
|
|
54
84
|
this$._objectType = objectType;
|
|
55
85
|
}
|
|
56
86
|
|
|
87
|
+
export function DataContext__get_Label(this$) {
|
|
88
|
+
return this$._label;
|
|
89
|
+
}
|
|
90
|
+
|
|
91
|
+
export function DataContext__set_Label_6DFDD678(this$, label) {
|
|
92
|
+
this$._label = label;
|
|
93
|
+
}
|
|
94
|
+
|
|
57
95
|
export function DataContext__get_Description(this$) {
|
|
58
96
|
return this$._description;
|
|
59
97
|
}
|
|
@@ -74,8 +112,17 @@ export function DataContext__AsData(this$) {
|
|
|
74
112
|
return new Data(unwrap(this$.ID), unwrap(this$.Name), unwrap(this$.DataType), unwrap(this$.Format), unwrap(this$.SelectorFormat), this$.Comments);
|
|
75
113
|
}
|
|
76
114
|
|
|
115
|
+
export function DataContext_fromData_Z7B4D7BF5(data, explication, unit, objectType, label, description, generatedBy) {
|
|
116
|
+
return DataContext_$ctor_Z780A8A2A(unwrap(data.ID), unwrap(data.Name), unwrap(data.DataType), unwrap(data.Format), unwrap(data.SelectorFormat), unwrap(explication), unwrap(unit), unwrap(objectType), unwrap(label), unwrap(description), unwrap(generatedBy), data.Comments);
|
|
117
|
+
}
|
|
118
|
+
|
|
119
|
+
export function DataContext_createAsPV(alternateName, measurementMethod, description, category, value, unit) {
|
|
120
|
+
let oa, v;
|
|
121
|
+
return DataContext_$ctor_Z780A8A2A(void 0, void 0, void 0, void 0, void 0, category, unit, (value == null) ? void 0 : ((value.tag === 0) ? ((oa = value.fields[0], oa)) : ((v = value, new OntologyAnnotation(v.Text)))), alternateName, description, measurementMethod);
|
|
122
|
+
}
|
|
123
|
+
|
|
77
124
|
export function DataContext__Copy(this$) {
|
|
78
|
-
const copy = DataContext_$
|
|
125
|
+
const copy = DataContext_$ctor_Z780A8A2A();
|
|
79
126
|
copy.ID = this$.ID;
|
|
80
127
|
copy.Name = this$.Name;
|
|
81
128
|
copy.DataType = this$.DataType;
|