@nfdi4plants/arctrl 2.0.0-beta.2 → 2.0.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (83) hide show
  1. package/ARC.js +55 -18
  2. package/Contract/ArcAssay.js +4 -4
  3. package/Contract/ArcInvestigation.js +4 -4
  4. package/Contract/ArcStudy.js +3 -3
  5. package/Contract/Datamap.js +1 -1
  6. package/Contract/ValidationPackagesConfig.js +96 -0
  7. package/Core/ArcTypes.js +93 -90
  8. package/Core/Conversion.js +13 -13
  9. package/Core/DataContext.js +53 -6
  10. package/Core/{Table/DataMap.js → DataMap.js} +34 -22
  11. package/Core/Process/Component.js +15 -5
  12. package/Core/Process/FactorValue.js +14 -5
  13. package/Core/Process/MaterialAttributeValue.js +14 -5
  14. package/Core/Process/ProcessParameterValue.js +11 -2
  15. package/Core/Table/ArcTable.js +99 -11
  16. package/Core/Table/CompositeCell.js +38 -23
  17. package/Core/Table/CompositeColumn.js +7 -30
  18. package/Core/Table/CompositeHeader.js +5 -215
  19. package/Core/{Process/Value.js → Value.js} +9 -9
  20. package/Json/Assay.js +10 -9
  21. package/Json/{Process/Data.js → Data.js} +17 -17
  22. package/Json/{Process/DataFile.js → DataFile.js} +9 -9
  23. package/Json/DataMap/DataContext.js +30 -0
  24. package/Json/DataMap/DataMap.js +25 -0
  25. package/Json/Encode.js +10 -1
  26. package/Json/Process/Component.js +1 -1
  27. package/Json/Process/FactorValue.js +1 -1
  28. package/Json/Process/MaterialAttributeValue.js +1 -1
  29. package/Json/Process/ProcessInput.js +1 -1
  30. package/Json/Process/ProcessOutput.js +1 -1
  31. package/Json/Process/ProcessParameterValue.js +2 -2
  32. package/Json/Process/Value.js +3 -3
  33. package/Json/{Process/PropertyValue.js → PropertyValue.js} +30 -21
  34. package/Json/Study.js +9 -8
  35. package/Json/Table/CompositeCell.js +1 -1
  36. package/Json/context/rocrate/isa_data_context.js +1 -1
  37. package/Json/context/rocrate/isa_investigation_context.js +1 -1
  38. package/Json/context/rocrate/property_value_context.js +1 -1
  39. package/Spreadsheet/AnnotationTable/ArcTable.js +3 -2
  40. package/Spreadsheet/AnnotationTable/CompositeColumn.js +9 -7
  41. package/Spreadsheet/ArcAssay.js +62 -26
  42. package/Spreadsheet/ArcInvestigation.js +59 -38
  43. package/Spreadsheet/ArcStudy.js +51 -20
  44. package/Spreadsheet/DataMap.js +1 -1
  45. package/Spreadsheet/DataMapTable/DataMapTable.js +3 -3
  46. package/Spreadsheet/Template.js +1 -1
  47. package/ValidationPackages/ValidationPackage.js +61 -0
  48. package/ValidationPackages/ValidationPackagesConfig.js +88 -0
  49. package/Xlsx.js +9 -9
  50. package/Yaml/Encode.js +8 -0
  51. package/Yaml/ValidationPackage.js +47 -0
  52. package/Yaml/ValidationPackagesConfig.js +48 -0
  53. package/fable_modules/YAMLicious.0.0.1/Decode.fs +374 -0
  54. package/fable_modules/YAMLicious.0.0.1/Decode.fs.js +1684 -0
  55. package/fable_modules/YAMLicious.0.0.1/Encode.fs +148 -0
  56. package/fable_modules/YAMLicious.0.0.1/Encode.fs.js +74 -0
  57. package/fable_modules/YAMLicious.0.0.1/Interop/JsInterop.fs +14 -0
  58. package/fable_modules/YAMLicious.0.0.1/Interop/JsInterop.fs.js +11 -0
  59. package/fable_modules/YAMLicious.0.0.1/Interop/PyInterop.fs +9 -0
  60. package/fable_modules/YAMLicious.0.0.1/Library.fs +138 -0
  61. package/fable_modules/YAMLicious.0.0.1/Library.fs.js +7 -0
  62. package/fable_modules/YAMLicious.0.0.1/Persil.fs +86 -0
  63. package/fable_modules/YAMLicious.0.0.1/Persil.fs.js +49 -0
  64. package/fable_modules/YAMLicious.0.0.1/Preprocessing.fs +59 -0
  65. package/fable_modules/YAMLicious.0.0.1/Preprocessing.fs.js +102 -0
  66. package/fable_modules/YAMLicious.0.0.1/Reader.fs +295 -0
  67. package/fable_modules/YAMLicious.0.0.1/Reader.fs.js +530 -0
  68. package/fable_modules/YAMLicious.0.0.1/Regex.fs +108 -0
  69. package/fable_modules/YAMLicious.0.0.1/Regex.fs.js +19 -0
  70. package/fable_modules/YAMLicious.0.0.1/RegexActivePatterns.fs +166 -0
  71. package/fable_modules/YAMLicious.0.0.1/RegexActivePatterns.fs.js +225 -0
  72. package/fable_modules/YAMLicious.0.0.1/Writer.fs +84 -0
  73. package/fable_modules/YAMLicious.0.0.1/Writer.fs.js +161 -0
  74. package/fable_modules/YAMLicious.0.0.1/YAMLicious.fableproj +39 -0
  75. package/fable_modules/YAMLicious.0.0.1/YAMLiciousTypes.fs +82 -0
  76. package/fable_modules/YAMLicious.0.0.1/YAMLiciousTypes.fs.js +130 -0
  77. package/fable_modules/YAMLicious.0.0.1/obj/Debug/netstandard2.0/.NETStandard,Version=v2.0.AssemblyAttributes.fs +3 -0
  78. package/fable_modules/YAMLicious.0.0.1/obj/Debug/netstandard2.0/YAMLicious.AssemblyInfo.fs +19 -0
  79. package/fable_modules/YAMLicious.0.0.1/obj/Release/netstandard2.0/.NETStandard,Version=v2.0.AssemblyAttributes.fs +3 -0
  80. package/fable_modules/YAMLicious.0.0.1/obj/Release/netstandard2.0/YAMLicious.AssemblyInfo.fs +19 -0
  81. package/fable_modules/project_cracked.json +1 -1
  82. package/index.js +1 -0
  83. package/package.json +1 -1
package/ARC.js CHANGED
@@ -1,4 +1,4 @@
1
- import { concat, fold, map, exactlyOne, tryPick, choose } from "./fable_modules/fable-library-js.4.16.0/Array.js";
1
+ import { append as append_1, contains as contains_1, concat, fold, map, exactlyOne, tryPick, choose } from "./fable_modules/fable-library-js.4.16.0/Array.js";
2
2
  import { ARCtrl_ArcAssay__ArcAssay_ToUpdateContract, ARCtrl_ArcAssay__ArcAssay_ToCreateContract_6FCE9E49, ARCtrl_ArcAssay__ArcAssay_ToDeleteContract, ARCtrl_ArcAssay__ArcAssay_tryFromReadContract_Static_7570923F } from "./Contract/ArcAssay.js";
3
3
  import { ARCtrl_DataMap__DataMap_ToUpdateContractForAssay_Z721C83C5, ARCtrl_DataMap__DataMap_ToCreateContractForAssay_Z721C83C5, ARCtrl_DataMap__DataMap_ToUpdateContractForStudy_Z721C83C5, ARCtrl_DataMap__DataMap_ToCreateContractForStudy_Z721C83C5, ARCtrl_DataMap__DataMap_tryFromReadContractForStudy_Static, ARCtrl_DataMap__DataMap_tryFromReadContractForAssay_Static } from "./Contract/Datamap.js";
4
4
  import { ARCtrl_ArcStudy__ArcStudy_ToCreateContract_6FCE9E49, ARCtrl_ArcStudy__ArcStudy_ToUpdateContract, ARCtrl_ArcStudy__ArcStudy_tryFromReadContract_Static_7570923F } from "./Contract/ArcStudy.js";
@@ -15,13 +15,13 @@ import { ofArray } from "./fable_modules/fable-library-js.4.16.0/List.js";
15
15
  import { tryISAReadContractFromPath } from "./Contract/ARC.js";
16
16
  import { ArcTables } from "./Core/Table/ArcTables.js";
17
17
  import { addToDict } from "./fable_modules/fable-library-js.4.16.0/MapUtil.js";
18
- import { toFsWorkbook } from "./Spreadsheet/ArcInvestigation.js";
18
+ import { ARCtrl_ArcInvestigation__ArcInvestigation_toFsWorkbook_Static_Z720BD3FF } from "./Spreadsheet/ArcInvestigation.js";
19
19
  import { ArcInvestigation } from "./Core/ArcTypes.js";
20
20
  import { Assay_datamapFileNameFromIdentifier, Assay_fileNameFromIdentifier, Study_datamapFileNameFromIdentifier, Study_fileNameFromIdentifier } from "./Core/Helper/Identifier.js";
21
- import { ARCtrl_ArcStudy__ArcStudy_toFsWorkbook_Static_353D0DB7 } from "./Spreadsheet/ArcStudy.js";
22
- import { DataMap__get_StaticHash, DataMap__set_StaticHash_Z524259A4 } from "./Core/Table/DataMap.js";
23
- import { toFsWorkbook as toFsWorkbook_1 } from "./Spreadsheet/DataMap.js";
24
- import { toFsWorkbook as toFsWorkbook_2 } from "./Spreadsheet/ArcAssay.js";
21
+ import { ARCtrl_ArcStudy__ArcStudy_toFsWorkbook_Static_Z4CEFA522 } from "./Spreadsheet/ArcStudy.js";
22
+ import { DataMap__get_StaticHash, DataMap__set_StaticHash_Z524259A4 } from "./Core/DataMap.js";
23
+ import { toFsWorkbook } from "./Spreadsheet/DataMap.js";
24
+ import { ARCtrl_ArcAssay__ArcAssay_toFsWorkbook_Static_Z2508BE4F } from "./Spreadsheet/ArcAssay.js";
25
25
  import { Dictionary_tryGet } from "./fable_modules/FsSpreadsheet.6.2.0/Cells/FsCellsCollection.fs.js";
26
26
  import { Clone_createCloneContract_5000466F, Init_createAddRemoteContract_Z721C83C5, gitignoreContract, gitattributesContract, Init_createInitContract_6DFDD678 } from "./Contract/Git.js";
27
27
  import { FSharpSet__Contains, ofSeq, unionMany } from "./fable_modules/fable-library-js.4.16.0/Set.js";
@@ -30,6 +30,7 @@ import { fromString } from "./fable_modules/Thoth.Json.JavaScript.0.1.0/Decode.f
30
30
  import { encoder, decoder as decoder_1 } from "./Json/ARC.js";
31
31
  import { toString } from "./fable_modules/Thoth.Json.JavaScript.0.1.0/Encode.fs.js";
32
32
  import { defaultSpaces } from "./Json/Encode.js";
33
+ import { ARCtrl_ValidationPackages_ValidationPackagesConfig__ValidationPackagesConfig_tryFromReadContract_Static_7570923F, ValidationPackagesConfigHelper_ReadContract, ARCtrl_ValidationPackages_ValidationPackagesConfig__ValidationPackagesConfig_toDeleteContract_Static_724DAE55, ARCtrl_ValidationPackages_ValidationPackagesConfig__ValidationPackagesConfig_toCreateContract_Static_724DAE55, ValidationPackagesConfigHelper_ConfigFilePath } from "./Contract/ValidationPackagesConfig.js";
33
34
  import { class_type } from "./fable_modules/fable-library-js.4.16.0/Reflection.js";
34
35
 
35
36
  export function ARCAux_getArcAssaysFromContracts(contracts) {
@@ -256,7 +257,9 @@ export class ARC {
256
257
  registeredStudy.UpdateReferenceByStudyFile(study, true);
257
258
  }
258
259
  const datamap = ARCAux_getAssayDataMapFromContracts(study.Identifier, contracts);
259
- study.DataMap = datamap;
260
+ if (study.DataMap == null) {
261
+ study.DataMap = datamap;
262
+ }
260
263
  study.StaticHash = (study.GetLightHashCode() | 0);
261
264
  });
262
265
  assays.forEach((assay) => {
@@ -273,7 +276,9 @@ export class ARC {
273
276
  const array_6 = assay_1.StudiesRegisteredIn;
274
277
  updatedTables = fold((tables, study_1) => ArcTables.updateReferenceTablesBySheets(new ArcTables(study_1.Tables), tables, false), new ArcTables(assay_1.Tables), array_6);
275
278
  const datamap_1 = ARCAux_getAssayDataMapFromContracts(assay_1.Identifier, contracts);
276
- assay_1.DataMap = datamap_1;
279
+ if (assay_1.DataMap == null) {
280
+ assay_1.DataMap = datamap_1;
281
+ }
277
282
  assay_1.Tables = updatedTables.Tables;
278
283
  });
279
284
  iterate((a_3) => {
@@ -297,28 +302,28 @@ export class ARC {
297
302
  const workbooks = new Map([]);
298
303
  const matchValue = this$.ISA;
299
304
  if (matchValue == null) {
300
- addToDict(workbooks, "isa.investigation.xlsx", ["ISA_Investigation", toFsWorkbook(ArcInvestigation.create("MISSING_IDENTIFIER_"))]);
305
+ addToDict(workbooks, "isa.investigation.xlsx", ["ISA_Investigation", ARCtrl_ArcInvestigation__ArcInvestigation_toFsWorkbook_Static_Z720BD3FF(ArcInvestigation.create("MISSING_IDENTIFIER_"))]);
301
306
  }
302
307
  else {
303
308
  const inv = matchValue;
304
- addToDict(workbooks, "isa.investigation.xlsx", ["ISA_Investigation", toFsWorkbook(inv)]);
309
+ addToDict(workbooks, "isa.investigation.xlsx", ["ISA_Investigation", ARCtrl_ArcInvestigation__ArcInvestigation_toFsWorkbook_Static_Z720BD3FF(inv)]);
305
310
  inv.StaticHash = (inv.GetLightHashCode() | 0);
306
311
  iterate((s) => {
307
312
  s.StaticHash = (s.GetLightHashCode() | 0);
308
- addToDict(workbooks, Study_fileNameFromIdentifier(s.Identifier), ["ISA_Study", ARCtrl_ArcStudy__ArcStudy_toFsWorkbook_Static_353D0DB7(s)]);
313
+ addToDict(workbooks, Study_fileNameFromIdentifier(s.Identifier), ["ISA_Study", ARCtrl_ArcStudy__ArcStudy_toFsWorkbook_Static_Z4CEFA522(s)]);
309
314
  if (s.DataMap != null) {
310
315
  const dm = value_2(s.DataMap);
311
316
  DataMap__set_StaticHash_Z524259A4(dm, safeHash(dm));
312
- addToDict(workbooks, Study_datamapFileNameFromIdentifier(s.Identifier), ["ISA_Datamap", toFsWorkbook_1(dm)]);
317
+ addToDict(workbooks, Study_datamapFileNameFromIdentifier(s.Identifier), ["ISA_Datamap", toFsWorkbook(dm)]);
313
318
  }
314
319
  }, inv.Studies);
315
320
  iterate((a) => {
316
321
  a.StaticHash = (a.GetLightHashCode() | 0);
317
- addToDict(workbooks, Assay_fileNameFromIdentifier(a.Identifier), ["ISA_Assay", toFsWorkbook_2(a)]);
322
+ addToDict(workbooks, Assay_fileNameFromIdentifier(a.Identifier), ["ISA_Assay", ARCtrl_ArcAssay__ArcAssay_toFsWorkbook_Static_Z2508BE4F(a)]);
318
323
  if (a.DataMap != null) {
319
324
  const dm_1 = value_2(a.DataMap);
320
325
  DataMap__set_StaticHash_Z524259A4(dm_1, safeHash(dm_1));
321
- addToDict(workbooks, Assay_datamapFileNameFromIdentifier(a.Identifier), ["ISA_Datamap", toFsWorkbook_1(dm_1)]);
326
+ addToDict(workbooks, Assay_datamapFileNameFromIdentifier(a.Identifier), ["ISA_Datamap", toFsWorkbook(dm_1)]);
322
327
  }
323
328
  }, inv.Assays);
324
329
  }
@@ -512,11 +517,43 @@ export class ARC {
512
517
  throw new Error(toText(printf("Error decoding string: %O"))(matchValue.fields[0]));
513
518
  })() : matchValue.fields[0]));
514
519
  }
520
+ ToROCrateJsonString(spaces) {
521
+ const this$ = this;
522
+ const value = encoder(value_2(this$._isa));
523
+ return toString(defaultSpaces(spaces), value);
524
+ }
515
525
  static toROCrateJsonString(spaces) {
516
- return (obj) => {
517
- const value = encoder(value_2(obj.ISA));
518
- return toString(defaultSpaces(spaces), value);
519
- };
526
+ return (obj) => obj.ToROCrateJsonString(unwrap(spaces));
527
+ }
528
+ GetValidationPackagesConfigWriteContract(vpc) {
529
+ const this$ = this;
530
+ const paths = this$.FileSystem.Tree.ToFilePaths();
531
+ if (!contains_1(ValidationPackagesConfigHelper_ConfigFilePath, paths, {
532
+ Equals: (x, y) => (x === y),
533
+ GetHashCode: stringHash,
534
+ })) {
535
+ const filePaths = append_1([ValidationPackagesConfigHelper_ConfigFilePath], paths);
536
+ this$.SetFilePaths(filePaths);
537
+ }
538
+ return ARCtrl_ValidationPackages_ValidationPackagesConfig__ValidationPackagesConfig_toCreateContract_Static_724DAE55(vpc);
539
+ }
540
+ GetValidationPackagesConfigDeleteContract(vpc) {
541
+ const this$ = this;
542
+ const paths = this$.FileSystem.Tree.ToFilePaths();
543
+ if (contains_1(ValidationPackagesConfigHelper_ConfigFilePath, paths, {
544
+ Equals: (x, y) => (x === y),
545
+ GetHashCode: stringHash,
546
+ })) {
547
+ const filePaths = paths.filter((p) => !(p === ValidationPackagesConfigHelper_ConfigFilePath));
548
+ this$.SetFilePaths(filePaths);
549
+ }
550
+ return ARCtrl_ValidationPackages_ValidationPackagesConfig__ValidationPackagesConfig_toDeleteContract_Static_724DAE55(vpc);
551
+ }
552
+ GetValidationPackagesConfigReadContract() {
553
+ return ValidationPackagesConfigHelper_ReadContract;
554
+ }
555
+ GetValidationPackagesConfigFromReadContract(contract) {
556
+ return ARCtrl_ValidationPackages_ValidationPackagesConfig__ValidationPackagesConfig_tryFromReadContract_Static_7570923F(contract);
520
557
  }
521
558
  }
522
559
 
@@ -4,7 +4,7 @@ import { defaultOf } from "../fable_modules/fable-library-js.4.16.0/Util.js";
4
4
  import { unwrap, defaultArg } from "../fable_modules/fable-library-js.4.16.0/Option.js";
5
5
  import { Assay_fileNameFromIdentifier } from "../Core/Helper/Identifier.js";
6
6
  import { Contract } from "./Contract.js";
7
- import { fromFsWorkbook, toFsWorkbook } from "../Spreadsheet/ArcAssay.js";
7
+ import { ARCtrl_ArcAssay__ArcAssay_fromFsWorkbook_Static_32154C9D, ARCtrl_ArcAssay__ArcAssay_toFsWorkbook_Static_Z2508BE4F } from "../Spreadsheet/ArcAssay.js";
8
8
  import { empty, singleton, collect, append, delay, toArray } from "../fable_modules/fable-library-js.4.16.0/Seq.js";
9
9
  import { FileSystemTree } from "../FileSystem/FileSystemTree.js";
10
10
 
@@ -39,7 +39,7 @@ export function $007CAssayPath$007C_$007C(input) {
39
39
  export function ARCtrl_ArcAssay__ArcAssay_ToCreateContract_6FCE9E49(this$, WithFolder) {
40
40
  const withFolder = defaultArg(WithFolder, false);
41
41
  const path = Assay_fileNameFromIdentifier(this$.Identifier);
42
- const c = Contract.createCreate(path, "ISA_Assay", toFsWorkbook(this$));
42
+ const c = Contract.createCreate(path, "ISA_Assay", ARCtrl_ArcAssay__ArcAssay_toFsWorkbook_Static_Z2508BE4F(this$));
43
43
  return toArray(delay(() => {
44
44
  let folderFS;
45
45
  return append(withFolder ? ((folderFS = FileSystemTree.createAssaysFolder([FileSystemTree.createAssayFolder(this$.Identifier)]), collect((p) => (((p !== path) && (p !== "assays/.gitkeep")) ? singleton(Contract.createCreate(p, "PlainText")) : empty()), folderFS.ToFilePaths(false)))) : empty(), delay(() => singleton(c)));
@@ -48,7 +48,7 @@ export function ARCtrl_ArcAssay__ArcAssay_ToCreateContract_6FCE9E49(this$, WithF
48
48
 
49
49
  export function ARCtrl_ArcAssay__ArcAssay_ToUpdateContract(this$) {
50
50
  const path = Assay_fileNameFromIdentifier(this$.Identifier);
51
- return Contract.createUpdate(path, "ISA_Assay", toFsWorkbook(this$));
51
+ return Contract.createUpdate(path, "ISA_Assay", ARCtrl_ArcAssay__ArcAssay_toFsWorkbook_Static_Z2508BE4F(this$));
52
52
  }
53
53
 
54
54
  export function ARCtrl_ArcAssay__ArcAssay_ToDeleteContract(this$) {
@@ -94,7 +94,7 @@ export function ARCtrl_ArcAssay__ArcAssay_tryFromReadContract_Static_7570923F(c)
94
94
  }
95
95
  switch (matchResult) {
96
96
  case 0:
97
- return fromFsWorkbook(fsworkbook);
97
+ return ARCtrl_ArcAssay__ArcAssay_fromFsWorkbook_Static_32154C9D(fsworkbook);
98
98
  default:
99
99
  return void 0;
100
100
  }
@@ -2,7 +2,7 @@ import { combineMany } from "../FileSystem/Path.js";
2
2
  import { item, equalsWith } from "../fable_modules/fable-library-js.4.16.0/Array.js";
3
3
  import { defaultOf } from "../fable_modules/fable-library-js.4.16.0/Util.js";
4
4
  import { Contract } from "./Contract.js";
5
- import { fromFsWorkbook, toFsWorkbook } from "../Spreadsheet/ArcInvestigation.js";
5
+ import { ARCtrl_ArcInvestigation__ArcInvestigation_fromFsWorkbook_Static_32154C9D, ARCtrl_ArcInvestigation__ArcInvestigation_toFsWorkbook_Static_Z720BD3FF } from "../Spreadsheet/ArcInvestigation.js";
6
6
 
7
7
  export function $007CInvestigationPath$007C_$007C(input) {
8
8
  let matchResult;
@@ -26,11 +26,11 @@ export function $007CInvestigationPath$007C_$007C(input) {
26
26
  }
27
27
 
28
28
  export function ARCtrl_ArcInvestigation__ArcInvestigation_ToCreateContract(this$) {
29
- return Contract.createCreate("isa.investigation.xlsx", "ISA_Investigation", toFsWorkbook(this$));
29
+ return Contract.createCreate("isa.investigation.xlsx", "ISA_Investigation", ARCtrl_ArcInvestigation__ArcInvestigation_toFsWorkbook_Static_Z720BD3FF(this$));
30
30
  }
31
31
 
32
32
  export function ARCtrl_ArcInvestigation__ArcInvestigation_ToUpdateContract(this$) {
33
- return Contract.createUpdate("isa.investigation.xlsx", "ISA_Investigation", toFsWorkbook(this$));
33
+ return Contract.createUpdate("isa.investigation.xlsx", "ISA_Investigation", ARCtrl_ArcInvestigation__ArcInvestigation_toFsWorkbook_Static_Z720BD3FF(this$));
34
34
  }
35
35
 
36
36
  export function ARCtrl_ArcInvestigation__ArcInvestigation_toCreateContract_Static_Z720BD3FF(inv) {
@@ -67,7 +67,7 @@ export function ARCtrl_ArcInvestigation__ArcInvestigation_tryFromReadContract_St
67
67
  }
68
68
  switch (matchResult) {
69
69
  case 0:
70
- return fromFsWorkbook(fsworkbook);
70
+ return ARCtrl_ArcInvestigation__ArcInvestigation_fromFsWorkbook_Static_32154C9D(fsworkbook);
71
71
  default:
72
72
  return void 0;
73
73
  }
@@ -4,7 +4,7 @@ import { defaultOf } from "../fable_modules/fable-library-js.4.16.0/Util.js";
4
4
  import { unwrap, defaultArg } from "../fable_modules/fable-library-js.4.16.0/Option.js";
5
5
  import { Study_fileNameFromIdentifier } from "../Core/Helper/Identifier.js";
6
6
  import { Contract } from "./Contract.js";
7
- import { ARCtrl_ArcStudy__ArcStudy_fromFsWorkbook_Static_32154C9D, ARCtrl_ArcStudy__ArcStudy_toFsWorkbook_Static_353D0DB7 } from "../Spreadsheet/ArcStudy.js";
7
+ import { ARCtrl_ArcStudy__ArcStudy_fromFsWorkbook_Static_32154C9D, ARCtrl_ArcStudy__ArcStudy_toFsWorkbook_Static_Z4CEFA522 } from "../Spreadsheet/ArcStudy.js";
8
8
  import { empty, singleton, collect, append, delay, toArray } from "../fable_modules/fable-library-js.4.16.0/Seq.js";
9
9
  import { FileSystemTree } from "../FileSystem/FileSystemTree.js";
10
10
 
@@ -39,7 +39,7 @@ export function $007CStudyPath$007C_$007C(input) {
39
39
  export function ARCtrl_ArcStudy__ArcStudy_ToCreateContract_6FCE9E49(this$, WithFolder) {
40
40
  const withFolder = defaultArg(WithFolder, false);
41
41
  const path = Study_fileNameFromIdentifier(this$.Identifier);
42
- const c = Contract.createCreate(path, "ISA_Study", ARCtrl_ArcStudy__ArcStudy_toFsWorkbook_Static_353D0DB7(this$));
42
+ const c = Contract.createCreate(path, "ISA_Study", ARCtrl_ArcStudy__ArcStudy_toFsWorkbook_Static_Z4CEFA522(this$));
43
43
  return toArray(delay(() => {
44
44
  let folderFS;
45
45
  return append(withFolder ? ((folderFS = FileSystemTree.createStudiesFolder([FileSystemTree.createStudyFolder(this$.Identifier)]), collect((p) => (((p !== path) && (p !== "studies/.gitkeep")) ? singleton(Contract.createCreate(p, "PlainText")) : empty()), folderFS.ToFilePaths(false)))) : empty(), delay(() => singleton(c)));
@@ -48,7 +48,7 @@ export function ARCtrl_ArcStudy__ArcStudy_ToCreateContract_6FCE9E49(this$, WithF
48
48
 
49
49
  export function ARCtrl_ArcStudy__ArcStudy_ToUpdateContract(this$) {
50
50
  const path = Study_fileNameFromIdentifier(this$.Identifier);
51
- return Contract.createUpdate(path, "ISA_Study", ARCtrl_ArcStudy__ArcStudy_toFsWorkbook_Static_353D0DB7(this$));
51
+ return Contract.createUpdate(path, "ISA_Study", ARCtrl_ArcStudy__ArcStudy_toFsWorkbook_Static_Z4CEFA522(this$));
52
52
  }
53
53
 
54
54
  export function ARCtrl_ArcStudy__ArcStudy_ToDeleteContract(this$) {
@@ -4,7 +4,7 @@ import { safeHash, defaultOf } from "../fable_modules/fable-library-js.4.16.0/Ut
4
4
  import { Study_datamapFileNameFromIdentifier, Assay_datamapFileNameFromIdentifier } from "../Core/Helper/Identifier.js";
5
5
  import { Contract } from "./Contract.js";
6
6
  import { fromFsWorkbook, toFsWorkbook } from "../Spreadsheet/DataMap.js";
7
- import { DataMap__set_StaticHash_Z524259A4 } from "../Core/Table/DataMap.js";
7
+ import { DataMap__set_StaticHash_Z524259A4 } from "../Core/DataMap.js";
8
8
 
9
9
  export function $007CDatamapPath$007C_$007C(input) {
10
10
  let matchResult;
@@ -0,0 +1,96 @@
1
+ import { combineMany } from "../FileSystem/Path.js";
2
+ import { Contract } from "./Contract.js";
3
+ import { item, equalsWith } from "../fable_modules/fable-library-js.4.16.0/Array.js";
4
+ import { defaultOf } from "../fable_modules/fable-library-js.4.16.0/Util.js";
5
+ import { ARCtrl_ValidationPackages_ValidationPackagesConfig__ValidationPackagesConfig_fromYamlString_Static_Z721C83C5, ARCtrl_ValidationPackages_ValidationPackagesConfig__ValidationPackagesConfig_toYamlString_Static_71136F3F } from "../Yaml/ValidationPackagesConfig.js";
6
+
7
+ export const ValidationPackagesConfigHelper_ConfigFilePath = combineMany([".arc", "validation_packages.yml"]);
8
+
9
+ export const ValidationPackagesConfigHelper_ReadContract = new Contract("READ", ValidationPackagesConfigHelper_ConfigFilePath, "YAML", void 0);
10
+
11
+ export function ValidationPackagesConfigExtensions_$007CValidationPackagesYamlPath$007C_$007C(input) {
12
+ let matchResult;
13
+ if (!equalsWith((x, y) => (x === y), input, defaultOf()) && (input.length === 2)) {
14
+ if (item(0, input) === ".arc") {
15
+ if (item(1, input) === "validation_packages.yml") {
16
+ matchResult = 0;
17
+ }
18
+ else {
19
+ matchResult = 1;
20
+ }
21
+ }
22
+ else {
23
+ matchResult = 1;
24
+ }
25
+ }
26
+ else {
27
+ matchResult = 1;
28
+ }
29
+ switch (matchResult) {
30
+ case 0:
31
+ return combineMany(input);
32
+ default:
33
+ return void 0;
34
+ }
35
+ }
36
+
37
+ export function ARCtrl_ValidationPackages_ValidationPackagesConfig__ValidationPackagesConfig_ToCreateContract(this$) {
38
+ return Contract.createCreate(ValidationPackagesConfigHelper_ConfigFilePath, "YAML", ARCtrl_ValidationPackages_ValidationPackagesConfig__ValidationPackagesConfig_toYamlString_Static_71136F3F()(this$));
39
+ }
40
+
41
+ export function ARCtrl_ValidationPackages_ValidationPackagesConfig__ValidationPackagesConfig_ToDeleteContract(this$) {
42
+ return Contract.createDelete(ValidationPackagesConfigHelper_ConfigFilePath);
43
+ }
44
+
45
+ export function ARCtrl_ValidationPackages_ValidationPackagesConfig__ValidationPackagesConfig_toDeleteContract_Static_724DAE55(config) {
46
+ return ARCtrl_ValidationPackages_ValidationPackagesConfig__ValidationPackagesConfig_ToDeleteContract(config);
47
+ }
48
+
49
+ export function ARCtrl_ValidationPackages_ValidationPackagesConfig__ValidationPackagesConfig_toCreateContract_Static_724DAE55(config) {
50
+ return ARCtrl_ValidationPackages_ValidationPackagesConfig__ValidationPackagesConfig_ToCreateContract(config);
51
+ }
52
+
53
+ export function ARCtrl_ValidationPackages_ValidationPackagesConfig__ValidationPackagesConfig_tryFromReadContract_Static_7570923F(c) {
54
+ let yaml;
55
+ let matchResult, p_1, yaml_1;
56
+ if (c.Operation === "READ") {
57
+ if (c.DTOType != null) {
58
+ if (c.DTOType === "YAML") {
59
+ if (c.DTO != null) {
60
+ if (typeof c.DTO === "string") {
61
+ if ((yaml = c.DTO, c.Path === ValidationPackagesConfigHelper_ConfigFilePath)) {
62
+ matchResult = 0;
63
+ p_1 = c.Path;
64
+ yaml_1 = c.DTO;
65
+ }
66
+ else {
67
+ matchResult = 1;
68
+ }
69
+ }
70
+ else {
71
+ matchResult = 1;
72
+ }
73
+ }
74
+ else {
75
+ matchResult = 1;
76
+ }
77
+ }
78
+ else {
79
+ matchResult = 1;
80
+ }
81
+ }
82
+ else {
83
+ matchResult = 1;
84
+ }
85
+ }
86
+ else {
87
+ matchResult = 1;
88
+ }
89
+ switch (matchResult) {
90
+ case 0:
91
+ return ARCtrl_ValidationPackages_ValidationPackagesConfig__ValidationPackagesConfig_fromYamlString_Static_Z721C83C5(yaml_1);
92
+ default:
93
+ return void 0;
94
+ }
95
+ }
96
+