@nfdi4plants/arctrl 2.0.0-beta.2 → 2.0.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/ARC.js +55 -18
- package/Contract/ArcAssay.js +4 -4
- package/Contract/ArcInvestigation.js +4 -4
- package/Contract/ArcStudy.js +3 -3
- package/Contract/Datamap.js +1 -1
- package/Contract/ValidationPackagesConfig.js +96 -0
- package/Core/ArcTypes.js +93 -90
- package/Core/Conversion.js +13 -13
- package/Core/DataContext.js +53 -6
- package/Core/{Table/DataMap.js → DataMap.js} +34 -22
- package/Core/Process/Component.js +15 -5
- package/Core/Process/FactorValue.js +14 -5
- package/Core/Process/MaterialAttributeValue.js +14 -5
- package/Core/Process/ProcessParameterValue.js +11 -2
- package/Core/Table/ArcTable.js +99 -11
- package/Core/Table/CompositeCell.js +38 -23
- package/Core/Table/CompositeColumn.js +7 -30
- package/Core/Table/CompositeHeader.js +5 -215
- package/Core/{Process/Value.js → Value.js} +9 -9
- package/Json/Assay.js +10 -9
- package/Json/{Process/Data.js → Data.js} +17 -17
- package/Json/{Process/DataFile.js → DataFile.js} +9 -9
- package/Json/DataMap/DataContext.js +30 -0
- package/Json/DataMap/DataMap.js +25 -0
- package/Json/Encode.js +10 -1
- package/Json/Process/Component.js +1 -1
- package/Json/Process/FactorValue.js +1 -1
- package/Json/Process/MaterialAttributeValue.js +1 -1
- package/Json/Process/ProcessInput.js +1 -1
- package/Json/Process/ProcessOutput.js +1 -1
- package/Json/Process/ProcessParameterValue.js +2 -2
- package/Json/Process/Value.js +3 -3
- package/Json/{Process/PropertyValue.js → PropertyValue.js} +30 -21
- package/Json/Study.js +9 -8
- package/Json/Table/CompositeCell.js +1 -1
- package/Json/context/rocrate/isa_data_context.js +1 -1
- package/Json/context/rocrate/isa_investigation_context.js +1 -1
- package/Json/context/rocrate/property_value_context.js +1 -1
- package/Spreadsheet/AnnotationTable/ArcTable.js +3 -2
- package/Spreadsheet/AnnotationTable/CompositeColumn.js +9 -7
- package/Spreadsheet/ArcAssay.js +62 -26
- package/Spreadsheet/ArcInvestigation.js +59 -38
- package/Spreadsheet/ArcStudy.js +51 -20
- package/Spreadsheet/DataMap.js +1 -1
- package/Spreadsheet/DataMapTable/DataMapTable.js +3 -3
- package/Spreadsheet/Template.js +1 -1
- package/ValidationPackages/ValidationPackage.js +61 -0
- package/ValidationPackages/ValidationPackagesConfig.js +88 -0
- package/Xlsx.js +9 -9
- package/Yaml/Encode.js +8 -0
- package/Yaml/ValidationPackage.js +47 -0
- package/Yaml/ValidationPackagesConfig.js +48 -0
- package/fable_modules/YAMLicious.0.0.1/Decode.fs +374 -0
- package/fable_modules/YAMLicious.0.0.1/Decode.fs.js +1684 -0
- package/fable_modules/YAMLicious.0.0.1/Encode.fs +148 -0
- package/fable_modules/YAMLicious.0.0.1/Encode.fs.js +74 -0
- package/fable_modules/YAMLicious.0.0.1/Interop/JsInterop.fs +14 -0
- package/fable_modules/YAMLicious.0.0.1/Interop/JsInterop.fs.js +11 -0
- package/fable_modules/YAMLicious.0.0.1/Interop/PyInterop.fs +9 -0
- package/fable_modules/YAMLicious.0.0.1/Library.fs +138 -0
- package/fable_modules/YAMLicious.0.0.1/Library.fs.js +7 -0
- package/fable_modules/YAMLicious.0.0.1/Persil.fs +86 -0
- package/fable_modules/YAMLicious.0.0.1/Persil.fs.js +49 -0
- package/fable_modules/YAMLicious.0.0.1/Preprocessing.fs +59 -0
- package/fable_modules/YAMLicious.0.0.1/Preprocessing.fs.js +102 -0
- package/fable_modules/YAMLicious.0.0.1/Reader.fs +295 -0
- package/fable_modules/YAMLicious.0.0.1/Reader.fs.js +530 -0
- package/fable_modules/YAMLicious.0.0.1/Regex.fs +108 -0
- package/fable_modules/YAMLicious.0.0.1/Regex.fs.js +19 -0
- package/fable_modules/YAMLicious.0.0.1/RegexActivePatterns.fs +166 -0
- package/fable_modules/YAMLicious.0.0.1/RegexActivePatterns.fs.js +225 -0
- package/fable_modules/YAMLicious.0.0.1/Writer.fs +84 -0
- package/fable_modules/YAMLicious.0.0.1/Writer.fs.js +161 -0
- package/fable_modules/YAMLicious.0.0.1/YAMLicious.fableproj +39 -0
- package/fable_modules/YAMLicious.0.0.1/YAMLiciousTypes.fs +82 -0
- package/fable_modules/YAMLicious.0.0.1/YAMLiciousTypes.fs.js +130 -0
- package/fable_modules/YAMLicious.0.0.1/obj/Debug/netstandard2.0/.NETStandard,Version=v2.0.AssemblyAttributes.fs +3 -0
- package/fable_modules/YAMLicious.0.0.1/obj/Debug/netstandard2.0/YAMLicious.AssemblyInfo.fs +19 -0
- package/fable_modules/YAMLicious.0.0.1/obj/Release/netstandard2.0/.NETStandard,Version=v2.0.AssemblyAttributes.fs +3 -0
- package/fable_modules/YAMLicious.0.0.1/obj/Release/netstandard2.0/YAMLicious.AssemblyInfo.fs +19 -0
- package/fable_modules/project_cracked.json +1 -1
- package/index.js +1 -0
- package/package.json +1 -1
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module YAMLicious.YAMLiciousTypes
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open System.Text
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open System.Collections.Generic
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type Config = {
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Whitespace: int
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Level: int
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} with
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static member init(?whitespace) : Config = {
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Whitespace = defaultArg whitespace 4
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Level = 0
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}
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member this.WhitespaceString =
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String.init (this.Level*this.Whitespace) (fun _ -> " ")
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type Preprocessor = {
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AST: PreprocessorElement
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StringMap: Dictionary<int, string>
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CommentMap: Dictionary<int, string>
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}
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and PreprocessorElement =
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| Level of PreprocessorElement list
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| Intendation of PreprocessorElement list
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| Line of string
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/// This does not write anything
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| Nil
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override this.ToString() =
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let sb = StringBuilder()
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let rec innerprint (next: PreprocessorElement) (level: int) =
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let indent = String.init (level*2) (fun _ -> " ")
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match next with
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| Line line -> sb.AppendLine(indent + $"Line \"{line}\"") |> ignore
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| Intendation children ->
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sb.AppendLine(indent + "Intendation [") |> ignore
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for child in children do
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innerprint child (level+1)
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sb.AppendLine(indent + "]") |> ignore
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| Level children ->
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sb.AppendLine(indent + "Level [") |> ignore
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for child in children do
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innerprint child (level+1)
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sb.AppendLine(indent + "]") |> ignore
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| Nil ->
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()
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innerprint this 0
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sb.ToString()
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type YAMLContent = {
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Value: string
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Comment: string option
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} with
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static member create (value, ?comment) = { Value = value; Comment = comment }
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[<RequireQualifiedAccess>]
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type YAMLElement =
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| Mapping of YAMLContent * YAMLElement
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| Value of YAMLContent
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// A true Yaml sequence
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| Sequence of YAMLElement list
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/// Same intendation list of yaml elements
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///
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/// Example1:
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///
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/// MyKey1: MyValue1
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/// MyKey2: MyValue2
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| Object of YAMLElement list
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| Comment of string
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// This does not write anything
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| Nil
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[<Literal>]
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let SequenceSquareDelimiter = ","
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[<Literal>]
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let NewLineChar = '\n'
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[<Literal>]
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let YAML_NULL = "null"
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import { Union, toString, Record } from "../fable-library-js.4.16.0/Types.js";
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import { option_type, union_type, list_type, class_type, string_type, record_type, int32_type } from "../fable-library-js.4.16.0/Reflection.js";
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import { defaultArg } from "../fable-library-js.4.16.0/Option.js";
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import { initialize } from "../fable-library-js.4.16.0/String.js";
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import { StringBuilder__AppendLine_Z721C83C5, StringBuilder_$ctor } from "../fable-library-js.4.16.0/System.Text.js";
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import { disposeSafe, getEnumerator } from "../fable-library-js.4.16.0/Util.js";
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export class Config extends Record {
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constructor(Whitespace, Level) {
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super();
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this.Whitespace = (Whitespace | 0);
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this.Level = (Level | 0);
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}
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}
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export function Config_$reflection() {
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return record_type("YAMLicious.YAMLiciousTypes.Config", [], Config, () => [["Whitespace", int32_type], ["Level", int32_type]]);
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}
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export function Config_init_71136F3F(whitespace) {
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return new Config(defaultArg(whitespace, 4), 0);
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}
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export function Config__get_WhitespaceString(this$) {
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return initialize(this$.Level * this$.Whitespace, (_arg) => " ");
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}
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export class Preprocessor extends Record {
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constructor(AST, StringMap, CommentMap) {
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super();
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this.AST = AST;
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this.StringMap = StringMap;
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this.CommentMap = CommentMap;
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}
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}
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export function Preprocessor_$reflection() {
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return record_type("YAMLicious.YAMLiciousTypes.Preprocessor", [], Preprocessor, () => [["AST", PreprocessorElement_$reflection()], ["StringMap", class_type("System.Collections.Generic.Dictionary`2", [int32_type, string_type])], ["CommentMap", class_type("System.Collections.Generic.Dictionary`2", [int32_type, string_type])]]);
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}
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export class PreprocessorElement extends Union {
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constructor(tag, fields) {
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super();
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this.tag = tag;
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this.fields = fields;
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}
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cases() {
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return ["Level", "Intendation", "Line", "Nil"];
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}
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toString() {
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const this$ = this;
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const sb = StringBuilder_$ctor();
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const innerprint = (next, level) => {
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const indent = initialize(level * 2, (_arg) => " ");
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switch (next.tag) {
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case 1: {
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StringBuilder__AppendLine_Z721C83C5(sb, indent + "Intendation [");
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const enumerator = getEnumerator(next.fields[0]);
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try {
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while (enumerator["System.Collections.IEnumerator.MoveNext"]()) {
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innerprint(enumerator["System.Collections.Generic.IEnumerator`1.get_Current"](), level + 1);
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}
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}
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finally {
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disposeSafe(enumerator);
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}
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StringBuilder__AppendLine_Z721C83C5(sb, indent + "]");
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break;
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}
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case 0: {
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StringBuilder__AppendLine_Z721C83C5(sb, indent + "Level [");
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const enumerator_1 = getEnumerator(next.fields[0]);
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try {
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while (enumerator_1["System.Collections.IEnumerator.MoveNext"]()) {
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innerprint(enumerator_1["System.Collections.Generic.IEnumerator`1.get_Current"](), level + 1);
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}
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}
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finally {
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disposeSafe(enumerator_1);
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}
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StringBuilder__AppendLine_Z721C83C5(sb, indent + "]");
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break;
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}
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case 3: {
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break;
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}
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default:
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StringBuilder__AppendLine_Z721C83C5(sb, indent + (`Line "${next.fields[0]}"`));
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}
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};
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innerprint(this$, 0);
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return toString(sb);
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}
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}
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export function PreprocessorElement_$reflection() {
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return union_type("YAMLicious.YAMLiciousTypes.PreprocessorElement", [], PreprocessorElement, () => [[["Item", list_type(PreprocessorElement_$reflection())]], [["Item", list_type(PreprocessorElement_$reflection())]], [["Item", string_type]], []]);
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}
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export class YAMLContent extends Record {
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constructor(Value, Comment$) {
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super();
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this.Value = Value;
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this.Comment = Comment$;
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}
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}
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export function YAMLContent_$reflection() {
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return record_type("YAMLicious.YAMLiciousTypes.YAMLContent", [], YAMLContent, () => [["Value", string_type], ["Comment", option_type(string_type)]]);
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}
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export function YAMLContent_create_27AED5E3(value, comment) {
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return new YAMLContent(value, comment);
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}
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export class YAMLElement extends Union {
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constructor(tag, fields) {
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super();
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this.tag = tag;
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this.fields = fields;
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}
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cases() {
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return ["Mapping", "Value", "Sequence", "Object", "Comment", "Nil"];
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}
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}
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export function YAMLElement_$reflection() {
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return union_type("YAMLicious.YAMLiciousTypes.YAMLElement", [], YAMLElement, () => [[["Item1", YAMLContent_$reflection()], ["Item2", YAMLElement_$reflection()]], [["Item", YAMLContent_$reflection()]], [["Item", list_type(YAMLElement_$reflection())]], [["Item", list_type(YAMLElement_$reflection())]], [["Item", string_type]], []]);
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}
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// <auto-generated>
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// Generated by the FSharp WriteCodeFragment class.
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// </auto-generated>
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namespace FSharp
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open System
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open System.Reflection
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[<assembly: System.Reflection.AssemblyCompanyAttribute("Caroline Ott, Kevin Frey")>]
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[<assembly: System.Reflection.AssemblyConfigurationAttribute("Debug")>]
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[<assembly: System.Reflection.AssemblyDescriptionAttribute("A encoder/decoder based YAML parser in Thoth.Json style!")>]
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[<assembly: System.Reflection.AssemblyFileVersionAttribute("1.0.0.0")>]
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[<assembly: System.Reflection.AssemblyInformationalVersionAttribute("1.0.0+26666d2a07a79a5ced21a120bfe0bace2bdb9947")>]
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[<assembly: System.Reflection.AssemblyProductAttribute("YAMLicious")>]
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[<assembly: System.Reflection.AssemblyTitleAttribute("YAMLicious")>]
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[<assembly: System.Reflection.AssemblyVersionAttribute("1.0.0.0")>]
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[<assembly: System.Reflection.AssemblyMetadataAttribute("RepositoryUrl", "https://github.com/CSBiology/YAMLicious")>]
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do()
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// <auto-generated>
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// Generated by the FSharp WriteCodeFragment class.
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// </auto-generated>
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namespace FSharp
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open System
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open System.Reflection
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[<assembly: System.Reflection.AssemblyCompanyAttribute("Caroline Ott, Kevin Frey")>]
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[<assembly: System.Reflection.AssemblyConfigurationAttribute("Release")>]
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[<assembly: System.Reflection.AssemblyDescriptionAttribute("A encoder/decoder based YAML parser in Thoth.Json style!")>]
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[<assembly: System.Reflection.AssemblyFileVersionAttribute("1.0.0.0")>]
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[<assembly: System.Reflection.AssemblyInformationalVersionAttribute("1.0.0+26666d2a07a79a5ced21a120bfe0bace2bdb9947")>]
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[<assembly: System.Reflection.AssemblyProductAttribute("YAMLicious")>]
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[<assembly: System.Reflection.AssemblyTitleAttribute("YAMLicious")>]
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[<assembly: System.Reflection.AssemblyVersionAttribute("1.0.0.0")>]
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[<assembly: System.Reflection.AssemblyMetadataAttribute("RepositoryUrl", "https://github.com/CSBiology/YAMLicious")>]
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do()
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-
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