@morscherlab/mint-sdk 1.2.0-beta.2 → 1.2.0-beta.3

package/src/components/ReagentList.vue

@@ -1,392 +0,0 @@
-<script setup lang="ts">
-/** Sortable, searchable table of experiment reagents showing lot number, expiry, storage conditions, and stock level with low-stock warnings. */
-import { ref, computed } from 'vue'
-import type { ReagentColumn, Reagent } from '../types'
-import { useSortedItems } from '../composables/useSortedItems'
-import { useTextSearch } from '../composables/useTextSearch'
-import {
-  REAGENT_COLUMN_LABELS as columnLabels,
-  formatReagentExpiryDate as formatExpiryDate,
-  getReagentColumnValue,
-  getReagentRowClasses,
-  getReagentStockFillClass as getStockFillClass,
-  getReagentStockLevel as getStockLevel,
-  isReagentExpired as isExpired,
-  isReagentExpiringSoon as isExpiringSoon,
-} from './ReagentList.presentation'
-
-interface Props {
-  modelValue?: Reagent[]
-  readonly?: boolean
-  showStockLevel?: boolean
-  lowStockThreshold?: number
-  columns?: ReagentColumn[]
-  sortable?: boolean
-  searchable?: boolean
-}
-
-const props = withDefaults(defineProps<Props>(), {
-  modelValue: () => [],
-  readonly: false,
-  showStockLevel: true,
-  lowStockThreshold: 10,
-  columns: () => ['name', 'lot', 'expiry', 'storage', 'stock'],
-  sortable: true,
-  searchable: true,
-})
-
-const emit = defineEmits<{
-  'update:modelValue': [reagents: Reagent[]]
-  'add': []
-  'edit': [reagent: Reagent]
-  'remove': [reagentId: string]
-  'reorder': [reagentId: string, fromIndex: number, toIndex: number]
-}>()
-
-// State
-const searchQuery = ref('')
-const sortColumn = ref<ReagentColumn | null>(null)
-const sortDirection = ref<'asc' | 'desc'>('asc')
-const draggedId = ref<string | null>(null)
-const dragOverId = ref<string | null>(null)
-
-const reagentSearch = useTextSearch({
-  items: () => props.modelValue || [],
-  query: searchQuery,
-  enabled: () => props.searchable,
-  getText: (reagent) => [
-    reagent.name,
-    reagent.catalogNumber,
-    reagent.lotNumber,
-    reagent.supplier,
-  ],
-})
-
-const reagentSort = computed(() => {
-  if (!sortColumn.value) return null
-  return {
-    key: sortColumn.value,
-    direction: sortDirection.value,
-  }
-})
-
-const sortedReagents = useSortedItems<Reagent, ReagentColumn>({
-  items: reagentSearch.filteredItems,
-  sort: reagentSort,
-  caseSensitive: false,
-  getValue: (reagent, column) => getReagentColumnValue(reagent, column),
-})
-const filteredReagents = sortedReagents.sortedItems
-
-function getRowClass(reagent: Reagent): string[] {
-  return getReagentRowClasses(reagent, {
-    lowStockThreshold: props.lowStockThreshold,
-    draggedId: draggedId.value,
-    dragOverId: dragOverId.value,
-  })
-}
-
-// Actions
-function handleSort(column: ReagentColumn) {
-  if (!props.sortable) return
-  if (sortColumn.value === column) {
-    sortDirection.value = sortDirection.value === 'asc' ? 'desc' : 'asc'
-  } else {
-    sortColumn.value = column
-    sortDirection.value = 'asc'
-  }
-}
-
-function handleEdit(reagent: Reagent) {
-  emit('edit', reagent)
-}
-
-function handleRemove(reagentId: string) {
-  emit('remove', reagentId)
-  const updated = (props.modelValue || []).filter((r) => r.id !== reagentId)
-  emit('update:modelValue', updated)
-}
-
-function handleAdd() {
-  emit('add')
-}
-
-// Drag and drop
-function handleDragStart(event: DragEvent, reagent: Reagent) {
-  if (props.readonly || !props.sortable) return
-  draggedId.value = reagent.id
-  if (event.dataTransfer) {
-    event.dataTransfer.effectAllowed = 'move'
-    event.dataTransfer.setData('text/plain', reagent.id)
-  }
-}
-
-function handleDragOver(event: DragEvent, reagent: Reagent) {
-  if (props.readonly || !props.sortable || !draggedId.value) return
-  event.preventDefault()
-  dragOverId.value = reagent.id
-}
-
-function handleDragLeave() {
-  dragOverId.value = null
-}
-
-function handleDrop(event: DragEvent, targetReagent: Reagent) {
-  if (props.readonly || !props.sortable || !draggedId.value) return
-  event.preventDefault()
-
-  const reagents = [...(props.modelValue || [])]
-  const fromIndex = reagents.findIndex((r) => r.id === draggedId.value)
-  const toIndex = reagents.findIndex((r) => r.id === targetReagent.id)
-
-  if (fromIndex === -1 || toIndex === -1 || fromIndex === toIndex) {
-    draggedId.value = null
-    dragOverId.value = null
-    return
-  }
-
-  const [removed] = reagents.splice(fromIndex, 1)
-  reagents.splice(toIndex, 0, removed)
-
-  emit('reorder', draggedId.value, fromIndex, toIndex)
-  emit('update:modelValue', reagents)
-
-  draggedId.value = null
-  dragOverId.value = null
-}
-
-function handleDragEnd() {
-  draggedId.value = null
-  dragOverId.value = null
-}
-</script>
-
-<template>
-  <div class="mint-reagent-list">
-    <!-- Header -->
-    <div class="mint-reagent-list__header">
-      <!-- Search -->
-      <div v-if="searchable" class="mint-reagent-list__search">
-        <svg class="mint-reagent-list__search-icon" fill="none" stroke="currentColor" viewBox="0 0 24 24">
-          <path stroke-linecap="round" stroke-linejoin="round" stroke-width="2" d="M21 21l-6-6m2-5a7 7 0 11-14 0 7 7 0 0114 0z" />
-        </svg>
-        <input
-          v-model="searchQuery"
-          type="text"
-          class="mint-reagent-list__search-input"
-          placeholder="Search reagents..."
-        />
-      </div>
-
-      <!-- Add button -->
-      <button
-        v-if="!readonly"
-        type="button"
-        class="mint-reagent-list__add-btn"
-        @click="handleAdd"
-      >
-        <svg fill="none" stroke="currentColor" viewBox="0 0 24 24">
-          <path stroke-linecap="round" stroke-linejoin="round" stroke-width="2" d="M12 4v16m8-8H4" />
-        </svg>
-        Add
-      </button>
-    </div>
-
-    <!-- Table -->
-    <table v-if="filteredReagents.length > 0" class="mint-reagent-list__table">
-      <thead>
-        <tr>
-          <th v-if="sortable && !readonly" style="width: 24px" />
-          <th
-            v-for="col in columns"
-            :key="col"
-            :class="[sortable ? 'mint-reagent-list__col--sortable' : '']"
-            @click="handleSort(col)"
-          >
-            {{ columnLabels[col] }}
-            <svg
-              v-if="sortable"
-              :class="[
-                'mint-reagent-list__sort-icon',
-                sortColumn === col ? 'mint-reagent-list__sort-icon--active' : '',
-              ]"
-              fill="none"
-              stroke="currentColor"
-              viewBox="0 0 24 24"
-            >
-              <path
-                v-if="sortColumn === col && sortDirection === 'desc'"
-                stroke-linecap="round"
-                stroke-linejoin="round"
-                stroke-width="2"
-                d="M19 9l-7 7-7-7"
-              />
-              <path
-                v-else
-                stroke-linecap="round"
-                stroke-linejoin="round"
-                stroke-width="2"
-                d="M5 15l7-7 7 7"
-              />
-            </svg>
-          </th>
-          <th v-if="!readonly" style="width: 80px" />
-        </tr>
-      </thead>
-      <tbody>
-        <tr
-          v-for="reagent in filteredReagents"
-          :key="reagent.id"
-          :class="getRowClass(reagent)"
-          :draggable="sortable && !readonly"
-          @dragstart="handleDragStart($event, reagent)"
-          @dragover="handleDragOver($event, reagent)"
-          @dragleave="handleDragLeave"
-          @drop="handleDrop($event, reagent)"
-          @dragend="handleDragEnd"
-        >
-          <!-- Drag handle -->
-          <td v-if="sortable && !readonly">
-            <svg class="mint-reagent-list__drag-handle" fill="none" stroke="currentColor" viewBox="0 0 24 24">
-              <path stroke-linecap="round" stroke-linejoin="round" stroke-width="2" d="M4 8h16M4 16h16" />
-            </svg>
-          </td>
-
-          <!-- Name -->
-          <td v-if="columns.includes('name')" class="mint-reagent-list__cell mint-reagent-list__cell--name">
-            <a
-              v-if="reagent.url"
-              :href="reagent.url"
-              target="_blank"
-              rel="noopener noreferrer"
-              class="mint-reagent-list__link"
-            >
-              {{ reagent.name }}
-            </a>
-            <span v-else>{{ reagent.name }}</span>
-          </td>
-
-          <!-- Catalog number -->
-          <td v-if="columns.includes('catalog')" class="mint-reagent-list__cell mint-reagent-list__cell--muted">
-            {{ reagent.catalogNumber || '-' }}
-          </td>
-
-          <!-- Lot number -->
-          <td v-if="columns.includes('lot')" class="mint-reagent-list__cell mint-reagent-list__cell--muted">
-            {{ reagent.lotNumber || '-' }}
-          </td>
-
-          <!-- Expiry -->
-          <td v-if="columns.includes('expiry')" class="mint-reagent-list__cell">
-            <span v-if="isExpired(reagent)" class="mint-reagent-list__expired-text">
-              {{ formatExpiryDate(reagent.expiryDate) }}
-            </span>
-            <span v-else-if="isExpiringSoon(reagent)" class="mint-reagent-list__expiring-text">
-              {{ formatExpiryDate(reagent.expiryDate) }}
-            </span>
-            <span v-else>
-              {{ formatExpiryDate(reagent.expiryDate) }}
-            </span>
-
-            <!-- Expiry badge -->
-            <span v-if="isExpired(reagent)" class="mint-reagent-list__badge mint-reagent-list__badge--error">
-              <svg class="mint-reagent-list__badge-icon" fill="none" stroke="currentColor" viewBox="0 0 24 24">
-                <path stroke-linecap="round" stroke-linejoin="round" stroke-width="2" d="M6 18L18 6M6 6l12 12" />
-              </svg>
-              Expired
-            </span>
-            <span v-else-if="isExpiringSoon(reagent)" class="mint-reagent-list__badge mint-reagent-list__badge--warning">
-              <svg class="mint-reagent-list__badge-icon" fill="none" stroke="currentColor" viewBox="0 0 24 24">
-                <path stroke-linecap="round" stroke-linejoin="round" stroke-width="2" d="M12 9v2m0 4h.01m-6.938 4h13.856c1.54 0 2.502-1.667 1.732-3L13.732 4c-.77-1.333-2.694-1.333-3.464 0L3.34 16c-.77 1.333.192 3 1.732 3z" />
-              </svg>
-              Soon
-            </span>
-          </td>
-
-          <!-- Storage -->
-          <td v-if="columns.includes('storage')" class="mint-reagent-list__cell">
-            <span
-              v-if="reagent.storageCondition"
-              :class="['mint-reagent-list__storage', `mint-reagent-list__storage--${reagent.storageCondition}`]"
-            >
-              {{ reagent.storageCondition }}
-            </span>
-            <span v-else class="mint-reagent-list__cell--muted">-</span>
-          </td>
-
-          <!-- Location -->
-          <td v-if="columns.includes('location')" class="mint-reagent-list__cell mint-reagent-list__cell--muted">
-            {{ reagent.location || '-' }}
-          </td>
-
-          <!-- Stock -->
-          <td v-if="columns.includes('stock') && showStockLevel" class="mint-reagent-list__cell">
-            <div v-if="reagent.stockLevel !== undefined" class="mint-reagent-list__stock">
-              <div class="mint-reagent-list__stock-bar">
-                <div
-                  :class="['mint-reagent-list__stock-fill', getStockFillClass(getStockLevel(reagent))]"
-                  :style="{ width: `${Math.min(100, getStockLevel(reagent))}%` }"
-                />
-              </div>
-              <span class="mint-reagent-list__stock-text">
-                {{ getStockLevel(reagent) }}%
-              </span>
-            </div>
-            <span v-else class="mint-reagent-list__cell--muted">-</span>
-          </td>
-
-          <!-- Supplier -->
-          <td v-if="columns.includes('supplier')" class="mint-reagent-list__cell mint-reagent-list__cell--muted">
-            {{ reagent.supplier || '-' }}
-          </td>
-
-          <!-- Actions -->
-          <td v-if="!readonly" class="mint-reagent-list__cell mint-reagent-list__cell--actions">
-            <button
-              type="button"
-              class="mint-reagent-list__action-btn"
-              aria-label="Edit"
-              @click="handleEdit(reagent)"
-            >
-              <svg fill="none" stroke="currentColor" viewBox="0 0 24 24">
-                <path stroke-linecap="round" stroke-linejoin="round" stroke-width="2" d="M11 5H6a2 2 0 00-2 2v11a2 2 0 002 2h11a2 2 0 002-2v-5m-1.414-9.414a2 2 0 112.828 2.828L11.828 15H9v-2.828l8.586-8.586z" />
-              </svg>
-            </button>
-            <button
-              type="button"
-              class="mint-reagent-list__action-btn mint-reagent-list__action-btn--danger"
-              aria-label="Remove"
-              @click="handleRemove(reagent.id)"
-            >
-              <svg fill="none" stroke="currentColor" viewBox="0 0 24 24">
-                <path stroke-linecap="round" stroke-linejoin="round" stroke-width="2" d="M19 7l-.867 12.142A2 2 0 0116.138 21H7.862a2 2 0 01-1.995-1.858L5 7m5 4v6m4-6v6m1-10V4a1 1 0 00-1-1h-4a1 1 0 00-1 1v3M4 7h16" />
-              </svg>
-            </button>
-          </td>
-        </tr>
-      </tbody>
-    </table>
-
-    <!-- Empty state -->
-    <div v-else class="mint-reagent-list__empty">
-      <svg class="mint-reagent-list__empty-icon" fill="none" stroke="currentColor" viewBox="0 0 24 24">
-        <path stroke-linecap="round" stroke-linejoin="round" stroke-width="2" d="M19.428 15.428a2 2 0 00-1.022-.547l-2.387-.477a6 6 0 00-3.86.517l-.318.158a6 6 0 01-3.86.517L6.05 15.21a2 2 0 00-1.806.547M8 4h8l-1 1v5.172a2 2 0 00.586 1.414l5 5c1.26 1.26.367 3.414-1.415 3.414H4.828c-1.782 0-2.674-2.154-1.414-3.414l5-5A2 2 0 009 10.172V5L8 4z" />
-      </svg>
-      <p class="mint-reagent-list__empty-text">
-        {{ searchQuery ? 'No reagents found' : 'No reagents added yet' }}
-      </p>
-      <button
-        v-if="!readonly && !searchQuery"
-        type="button"
-        class="mint-reagent-list__empty-btn"
-        @click="handleAdd"
-      >
-        Add Reagent
-      </button>
-    </div>
-  </div>
-</template>
-
-<style>
-@import '../styles/components/reagent-list.css';
-</style>

package/src/components/ResourceCard.story.vue

@@ -1,150 +0,0 @@
-<script setup lang="ts">
-import ResourceCard from './ResourceCard.vue'
-import type { ResourceSpec } from '../types/components'
-
-const plateReaderSpecs: ResourceSpec[] = [
-  { label: 'Detection', value: 'Absorbance, Fluorescence, Luminescence' },
-  { label: 'Plate formats', value: '6 to 384-well' },
-  { label: 'Temperature', value: 'RT to 45 C' },
-]
-
-const flowCytoSpecs: ResourceSpec[] = [
-  { label: 'Lasers', value: '405nm, 488nm, 561nm, 640nm' },
-  { label: 'Detectors', value: '14 fluorescence + FSC/SSC' },
-  { label: 'Throughput', value: 'Up to 10,000 events/sec' },
-]
-
-function initState() {
-  return {
-    name: 'BMG CLARIOstar Plus',
-    description: 'Multi-mode microplate reader with UV/Vis absorbance, fluorescence, and luminescence detection.',
-    status: 'available' as const,
-    location: 'Lab 204, Bench 3',
-    specs: plateReaderSpecs,
-    tags: ['Plate Reader', 'High-throughput'],
-    nextAvailable: undefined as string | undefined,
-    showBookAction: true,
-    compact: false,
-    size: 'md' as const,
-  }
-}
-</script>
-
-<template>
-  <Story title="Scheduling/ResourceCard">
-    <Variant title="Playground" :init-state="initState">
-      <template #default="{ state }">
-        <div style="padding: 2rem; max-width: 500px;">
-          <ResourceCard
-            :name="state.name"
-            :description="state.description"
-            :status="state.status"
-            :location="state.location"
-            :specs="state.specs"
-            :tags="state.tags"
-            :next-available="state.nextAvailable"
-            :show-book-action="state.showBookAction"
-            :compact="state.compact"
-            :size="state.size"
-            @book="() => console.log('Book clicked')"
-            @click="() => console.log('Card clicked')"
-          />
-        </div>
-      </template>
-      <template #controls="{ state }">
-        <HstText v-model="state.name" title="Name" />
-        <HstText v-model="state.description" title="Description" />
-        <HstSelect
-          v-model="state.status"
-          title="Status"
-          :options="[
-            { value: 'available', label: 'Available' },
-            { value: 'in-use', label: 'In Use' },
-            { value: 'maintenance', label: 'Maintenance' },
-            { value: 'offline', label: 'Offline' },
-          ]"
-        />
-        <HstText v-model="state.location" title="Location" />
-        <HstCheckbox v-model="state.showBookAction" title="Show Book Action" />
-        <HstCheckbox v-model="state.compact" title="Compact" />
-        <HstSelect
-          v-model="state.size"
-          title="Size"
-          :options="[
-            { value: 'sm', label: 'Small' },
-            { value: 'md', label: 'Medium' },
-            { value: 'lg', label: 'Large' },
-          ]"
-        />
-      </template>
-    </Variant>
-
-    <Variant title="In Use">
-      <div style="padding: 2rem; max-width: 500px;">
-        <ResourceCard
-          name="BD FACSCanto II"
-          description="Flow cytometer with 3-laser, 8-color capability for cell analysis."
-          status="in-use"
-          location="Lab 201, Room B"
-          :specs="flowCytoSpecs"
-          :tags="['Flow Cytometry', 'Cell Analysis']"
-          next-available="Today at 15:30"
-        />
-      </div>
-    </Variant>
-
-    <Variant title="Maintenance">
-      <div style="padding: 2rem; max-width: 500px;">
-        <ResourceCard
-          name="Thermo Fisher Centrifuge"
-          description="High-speed refrigerated centrifuge for sample processing."
-          status="maintenance"
-          location="Lab 203"
-          :tags="['Centrifuge']"
-          next-available="Tomorrow at 09:00"
-        />
-      </div>
-    </Variant>
-
-    <Variant title="Compact Mode">
-      <div style="padding: 2rem; max-width: 500px; display: flex; flex-direction: column; gap: 0.5rem;">
-        <ResourceCard name="Plate Reader" status="available" compact />
-        <ResourceCard name="Flow Cytometer" status="in-use" compact />
-        <ResourceCard name="Centrifuge" status="maintenance" compact />
-        <ResourceCard name="Mass Spec" status="offline" compact />
-      </div>
-    </Variant>
-
-    <Variant title="All Statuses (Card)">
-      <div style="padding: 2rem; display: grid; grid-template-columns: 1fr 1fr; gap: 1rem; max-width: 900px;">
-        <ResourceCard
-          name="Available Resource"
-          description="This resource is available for booking."
-          status="available"
-          :tags="['Lab Equipment']"
-        />
-        <ResourceCard
-          name="In-Use Resource"
-          description="Currently being used by another researcher."
-          status="in-use"
-          next-available="In 2 hours"
-          :tags="['Lab Equipment']"
-        />
-        <ResourceCard
-          name="Maintenance Resource"
-          description="Undergoing scheduled maintenance."
-          status="maintenance"
-          next-available="Next Monday"
-          :tags="['Lab Equipment']"
-        />
-        <ResourceCard
-          name="Offline Resource"
-          description="Currently offline and unavailable."
-          status="offline"
-          :tags="['Lab Equipment']"
-          :show-book-action="false"
-        />
-      </div>
-    </Variant>
-  </Story>
-</template>