@morscherlab/mint-sdk 1.0.0-rc.1 → 1.0.0-rc.2

package/src/stores/auth.ts

@@ -1,6 +1,15 @@
 import { defineStore } from 'pinia'
 import { ref, computed } from 'vue'
 import type { AuthConfig, UserInfo } from '../types'
+import {
+  canAccessAdmin as canUserAccessAdmin,
+  canAccessPlugin as canUserAccessPlugin,
+  getAccessAudience,
+  getUserPermissions,
+  hasAllPermissions,
+  hasAnyPermission,
+  isAdminUser,
+} from '../permissions'
 
 const AUTH_TOKEN_KEY = 'mint-auth-token'
 const AUTH_EXPIRES_KEY = 'mint-auth-expires'
@@ -73,9 +82,10 @@ export const useAuthStore = defineStore('mint-auth', () => {
     return authConfig.value.authRequired && !isAuthenticated.value
   })
 
-  const isAdmin = computed(() => {
-    return userInfo.value?.role === 'admin'
-  })
+  const isAdmin = computed(() => isAdminUser(userInfo.value))
+  const userType = computed(() => getAccessAudience(userInfo.value))
+  const permissions = computed(() => getUserPermissions(userInfo.value))
+  const canAccessAdmin = computed(() => canUserAccessAdmin(userInfo.value))
 
   const canRegister = computed(() => {
     return authConfig.value.registrationEnabled
@@ -126,6 +136,18 @@ export const useAuthStore = defineStore('mint-auth', () => {
     username.value = info.username
   }
 
+  function hasPermission(...perms: string[]): boolean {
+    return hasAllPermissions(userInfo.value, perms)
+  }
+
+  function hasAnyPermissionForUser(...perms: string[]): boolean {
+    return hasAnyPermission(userInfo.value, perms)
+  }
+
+  function canAccessPlugin(pluginName: string): boolean {
+    return canUserAccessPlugin(userInfo.value, pluginName)
+  }
+
   function setAuthConfig(config: AuthConfig) {
     authConfig.value = config
   }
@@ -161,6 +183,9 @@ export const useAuthStore = defineStore('mint-auth', () => {
     isAuthenticated,
     needsAuth,
     isAdmin,
+    userType,
+    permissions,
+    canAccessAdmin,
     canRegister,
 
     // Actions
@@ -172,6 +197,9 @@ export const useAuthStore = defineStore('mint-auth', () => {
     setUserInfo,
     setError,
     setLoading,
+    hasPermission,
+    hasAnyPermission: hasAnyPermissionForUser,
+    canAccessPlugin,
     logout,
   }
 })

package/src/styles/components/instrument-monitor.css

@@ -0,0 +1,478 @@
+.mint-instrument-state {
+  display: inline-flex;
+  align-items: center;
+  gap: 0.3125rem;
+  border-radius: 999px;
+  font-size: 0.6875rem;
+  font-weight: 700;
+  letter-spacing: 0.04em;
+  line-height: 1.35;
+  padding: 0.125rem 0.625rem;
+  white-space: nowrap;
+}
+
+.mint-instrument-state--success {
+  background: color-mix(in srgb, var(--mint-success, #22c55e) 12%, transparent);
+  color: var(--mint-success, #22c55e);
+}
+
+.mint-instrument-state--warning {
+  background: color-mix(in srgb, var(--mint-warning, #eab308) 12%, transparent);
+  color: var(--mint-warning, #eab308);
+}
+
+.mint-instrument-state--error {
+  background: color-mix(in srgb, var(--mint-error, #ef4444) 12%, transparent);
+  color: var(--mint-error, #ef4444);
+}
+
+.mint-instrument-state--info {
+  background: color-mix(in srgb, var(--mint-info, #3b82f6) 12%, transparent);
+  color: var(--mint-info, #3b82f6);
+}
+
+.mint-instrument-state--muted {
+  background: var(--bg-secondary, #f1f5f9);
+  color: var(--text-muted, #64748b);
+}
+
+.mint-instrument-state--offline {
+  border: 1px dashed var(--border-color, #e2e8f0);
+}
+
+.mint-instrument-state__dot {
+  width: 0.375rem;
+  height: 0.375rem;
+  border-radius: 999px;
+  background: currentColor;
+  animation: mint-instrument-pulse 1.5s ease-in-out infinite;
+}
+
+.mint-instrument-card {
+  display: flex;
+  min-width: 0;
+  flex-direction: column;
+  gap: 0.75rem;
+  border: 1px solid var(--border-color, #e2e8f0);
+  border-radius: 0.75rem;
+  background: var(--bg-primary, #fff);
+  padding: 1.25rem;
+  transition: border-color 150ms ease-out, box-shadow 150ms ease-out;
+}
+
+.mint-instrument-card--running {
+  border-color: color-mix(in srgb, var(--mint-success, #22c55e) 30%, var(--border-color, #e2e8f0));
+  box-shadow: 0 0 12px rgba(34, 197, 94, 0.06), 0 1px 3px rgba(0, 0, 0, 0.04);
+}
+
+.mint-instrument-card--error {
+  border-color: var(--mint-error, #ef4444);
+  box-shadow: 0 0 12px rgba(239, 68, 68, 0.12), 0 1px 3px rgba(0, 0, 0, 0.04);
+}
+
+.mint-instrument-card--connected {
+  border-color: color-mix(in srgb, var(--mint-info, #3b82f6) 25%, var(--border-color, #e2e8f0));
+}
+
+.mint-instrument-card--disconnected {
+  border-style: dashed;
+  opacity: 0.68;
+}
+
+.mint-instrument-card__header,
+.mint-instrument-card__sample-row,
+.mint-instrument-card__eta,
+.mint-instrument-alert__header,
+.mint-instrument-alert__footer {
+  display: flex;
+  align-items: center;
+}
+
+.mint-instrument-card__header {
+  gap: 0.625rem;
+  min-width: 0;
+}
+
+.mint-instrument-card__dot {
+  width: 0.75rem;
+  height: 0.75rem;
+  flex: 0 0 auto;
+  border-radius: 999px;
+}
+
+.mint-instrument-card__dot--success {
+  background: var(--mint-success, #22c55e);
+  box-shadow: 0 0 8px rgba(34, 197, 94, 0.5);
+}
+
+.mint-instrument-card__dot--warning {
+  background: var(--mint-warning, #eab308);
+}
+
+.mint-instrument-card__dot--error {
+  background: var(--mint-error, #ef4444);
+  box-shadow: 0 0 8px rgba(239, 68, 68, 0.45);
+}
+
+.mint-instrument-card__dot--info {
+  background: var(--mint-info, #3b82f6);
+}
+
+.mint-instrument-card__dot--muted {
+  background: var(--text-muted, #64748b);
+  opacity: 0.38;
+}
+
+.mint-instrument-card__name {
+  min-width: 0;
+  flex: 1 1 auto;
+  overflow: hidden;
+  color: var(--text-primary, #0f172a);
+  font-size: 1.0625rem;
+  font-weight: 700;
+  text-overflow: ellipsis;
+  white-space: nowrap;
+}
+
+.mint-instrument-card__sample {
+  display: flex;
+  flex-direction: column;
+  gap: 0.25rem;
+  border: 1px solid color-mix(in srgb, var(--mint-success, #22c55e) 20%, var(--border-color, #e2e8f0));
+  border-radius: 0.375rem;
+  background: color-mix(in srgb, var(--mint-success, #22c55e) 5%, transparent);
+  padding: 0.5rem 0.625rem;
+}
+
+.mint-instrument-card__sample-label {
+  color: var(--mint-success, #22c55e);
+  font-size: 0.625rem;
+  font-weight: 700;
+  letter-spacing: 0.05em;
+  text-transform: uppercase;
+}
+
+.mint-instrument-card__sample-row {
+  gap: 0.375rem;
+  min-width: 0;
+}
+
+.mint-instrument-card__sample-dot {
+  width: 0.375rem;
+  height: 0.375rem;
+  flex: 0 0 auto;
+  border-radius: 999px;
+  background: var(--mint-success, #22c55e);
+}
+
+.mint-instrument-card__sample-name,
+.mint-instrument-card__method,
+.mint-instrument-card__sequence {
+  min-width: 0;
+  overflow: hidden;
+  text-overflow: ellipsis;
+  white-space: nowrap;
+}
+
+.mint-instrument-card__sample-name {
+  flex: 1 1 auto;
+  color: var(--text-primary, #0f172a);
+  font-family: var(--font-mono, 'Fira Code', monospace);
+  font-size: 0.8125rem;
+  font-weight: 700;
+}
+
+.mint-instrument-card__sample-vial,
+.mint-instrument-card__method,
+.mint-instrument-card__sequence,
+.mint-instrument-card__muted {
+  color: var(--text-muted, #64748b);
+  font-family: var(--font-mono, 'Fira Code', monospace);
+  font-size: 0.75rem;
+}
+
+.mint-instrument-card__sample-vial {
+  flex: 0 0 auto;
+  font-size: 0.6875rem;
+}
+
+.mint-instrument-card__eta {
+  gap: 0.5rem;
+  border-radius: 0.5rem;
+  background: var(--bg-secondary, #f1f5f9);
+  padding: 0.5rem 0.625rem;
+}
+
+.mint-instrument-card__eta-label {
+  color: var(--text-muted, #64748b);
+  font-size: 0.625rem;
+  font-weight: 700;
+  letter-spacing: 0.05em;
+}
+
+.mint-instrument-card__eta-time {
+  color: var(--text-primary, #0f172a);
+  font-family: var(--font-mono, 'Fira Code', monospace);
+  font-size: 0.875rem;
+  font-weight: 700;
+}
+
+.mint-instrument-card__eta-remaining {
+  margin-left: auto;
+  color: var(--text-muted, #64748b);
+  font-family: var(--font-mono, 'Fira Code', monospace);
+  font-size: 0.6875rem;
+}
+
+.mint-instrument-card__error {
+  border: 1px solid color-mix(in srgb, var(--mint-error, #ef4444) 22%, var(--border-color, #e2e8f0));
+  border-radius: 0.5rem;
+  background: color-mix(in srgb, var(--mint-error, #ef4444) 8%, transparent);
+  padding: 0.625rem 0.75rem;
+}
+
+.mint-instrument-card__error-message {
+  color: var(--mint-error, #ef4444);
+  font-size: 0.8125rem;
+  font-weight: 700;
+}
+
+.mint-instrument-card__error-detail {
+  margin-top: 0.25rem;
+  color: var(--text-muted, #64748b);
+  font-size: 0.75rem;
+}
+
+.mint-instrument-card__placeholder {
+  display: grid;
+  gap: 0.625rem;
+}
+
+.mint-instrument-alert-log {
+  display: flex;
+  min-height: 0;
+  flex-direction: column;
+}
+
+.mint-instrument-alert-log__header {
+  padding: 0.875rem 1rem 0.625rem;
+}
+
+.mint-instrument-alert-log__title {
+  color: var(--text-muted, #64748b);
+  font-size: 0.75rem;
+  font-weight: 700;
+  letter-spacing: 0.04em;
+  text-transform: uppercase;
+}
+
+.mint-instrument-alert-log__filters {
+  display: flex;
+  flex-direction: column;
+  gap: 0.375rem;
+  border-bottom: 1px solid var(--border-color, #e2e8f0);
+  padding: 0 0.75rem 0.625rem;
+}
+
+.mint-instrument-alert-log__filter-row {
+  display: flex;
+  flex-wrap: wrap;
+  gap: 0.3125rem;
+}
+
+.mint-instrument-alert-log__filter {
+  display: inline-flex;
+  align-items: center;
+  gap: 0.3125rem;
+  border: 1px solid var(--border-color, #e2e8f0);
+  border-radius: 999px;
+  background: var(--bg-secondary, #f1f5f9);
+  color: var(--text-muted, #64748b);
+  cursor: pointer;
+  font-size: 0.6875rem;
+  font-weight: 600;
+  opacity: 0.56;
+  padding: 0.1875rem 0.5rem;
+  transition: opacity 150ms ease-out, border-color 150ms ease-out, background 150ms ease-out;
+}
+
+.mint-instrument-alert-log__filter--active {
+  border-color: var(--filter-color, var(--border-color, #e2e8f0));
+  background: color-mix(in srgb, var(--filter-color, transparent) 8%, var(--bg-secondary, #f1f5f9));
+  color: var(--text-primary, #0f172a);
+  opacity: 1;
+}
+
+.mint-instrument-alert-log__filter:hover {
+  opacity: 0.86;
+}
+
+.mint-instrument-alert-log__filter--active:hover {
+  opacity: 1;
+}
+
+.mint-instrument-alert-log__filter-dot {
+  width: 0.375rem;
+  height: 0.375rem;
+  flex: 0 0 auto;
+  border-radius: 999px;
+}
+
+.mint-instrument-alert-log__filter-count {
+  min-width: 0.875rem;
+  color: var(--text-muted, #64748b);
+  font-family: var(--font-mono, 'Fira Code', monospace);
+  font-size: 0.625rem;
+  text-align: center;
+}
+
+.mint-instrument-alert-log__list {
+  display: flex;
+  min-height: 0;
+  flex: 1 1 auto;
+  flex-direction: column;
+  gap: 0.5rem;
+  overflow-y: auto;
+  padding: 0.5rem;
+}
+
+.mint-instrument-alert {
+  border-left: 3px solid transparent;
+  border-radius: 0.375rem;
+  font-size: 0.8125rem;
+  line-height: 1.4;
+  padding: 0.625rem 0.75rem;
+  transition: opacity 150ms ease-out;
+}
+
+.mint-instrument-alert--critical {
+  border-left-color: var(--mint-error, #ef4444);
+  background: color-mix(in srgb, var(--mint-error, #ef4444) 8%, transparent);
+}
+
+.mint-instrument-alert--warning {
+  border-left-color: var(--mint-warning, #eab308);
+  background: color-mix(in srgb, var(--mint-warning, #eab308) 8%, transparent);
+}
+
+.mint-instrument-alert--info {
+  border-left-color: var(--mint-info, #3b82f6);
+  background: color-mix(in srgb, var(--mint-info, #3b82f6) 6%, transparent);
+}
+
+.mint-instrument-alert--acknowledged {
+  opacity: 0.52;
+}
+
+.mint-instrument-alert__header {
+  gap: 0.375rem;
+  margin-bottom: 0.1875rem;
+  min-width: 0;
+}
+
+.mint-instrument-alert__instrument {
+  min-width: 0;
+  overflow: hidden;
+  color: var(--text-primary, #0f172a);
+  font-size: 0.8125rem;
+  font-weight: 700;
+  text-overflow: ellipsis;
+  white-space: nowrap;
+}
+
+.mint-instrument-alert__source {
+  border: 1px solid var(--border-color, #e2e8f0);
+  border-radius: 0.1875rem;
+  background: var(--bg-secondary, #f1f5f9);
+  color: var(--text-muted, #64748b);
+  flex: 0 0 auto;
+  font-size: 0.625rem;
+  font-weight: 700;
+  letter-spacing: 0.02em;
+  padding: 0 0.25rem;
+}
+
+.mint-instrument-alert__time {
+  flex: 0 0 auto;
+  margin-left: auto;
+  color: var(--text-muted, #64748b);
+  font-family: var(--font-mono, 'Fira Code', monospace);
+  font-size: 0.6875rem;
+}
+
+.mint-instrument-alert__detail {
+  color: var(--text-secondary, #475569);
+  font-size: 0.8125rem;
+  line-height: 1.5;
+  overflow-wrap: break-word;
+}
+
+.mint-instrument-alert__footer {
+  gap: 0.5rem;
+  margin-top: 0.375rem;
+}
+
+.mint-instrument-alert__code,
+.mint-instrument-alert__ack {
+  border: 1px solid var(--border-color, #e2e8f0);
+  border-radius: 0.25rem;
+  background: var(--bg-secondary, #f1f5f9);
+  color: var(--text-muted, #64748b);
+  font-size: 0.6875rem;
+  padding: 0.25rem 0.5rem;
+}
+
+.mint-instrument-alert__code {
+  font-family: var(--font-mono, 'Fira Code', monospace);
+  font-weight: 700;
+}
+
+.mint-instrument-alert__ack {
+  cursor: pointer;
+  transition: background 150ms ease-out, color 150ms ease-out;
+}
+
+.mint-instrument-alert__ack:hover {
+  background: var(--bg-primary, #fff);
+  color: var(--text-primary, #0f172a);
+}
+
+.mint-instrument-alert-log__empty {
+  color: var(--text-muted, #64748b);
+  font-size: 0.8125rem;
+  padding: 2rem 1rem;
+  text-align: center;
+}
+
+.mint-instrument-alert-enter-active {
+  transition: opacity 0.2s ease-out;
+}
+
+.mint-instrument-alert-leave-active {
+  transition: opacity 0.15s ease-in;
+}
+
+.mint-instrument-alert-enter-from,
+.mint-instrument-alert-leave-to {
+  opacity: 0;
+}
+
+@keyframes mint-instrument-pulse {
+  0%, 100% {
+    opacity: 1;
+    box-shadow: 0 0 0 0 currentColor;
+  }
+  50% {
+    opacity: 0.72;
+    box-shadow: 0 0 0 3px transparent;
+  }
+}
+
+@media (prefers-reduced-motion: reduce) {
+  .mint-instrument-state__dot,
+  .mint-instrument-alert-enter-active,
+  .mint-instrument-alert-leave-active {
+    animation: none;
+    transition: none;
+  }
+}

package/src/styles/components/lcms-sequence-table.css

@@ -0,0 +1,189 @@
+.mint-lcms-sequence-table {
+  min-width: 0;
+  overflow: hidden;
+}
+
+.mint-lcms-sequence-table__scroller {
+  overflow-x: auto;
+}
+
+.mint-lcms-sequence-table__table {
+  width: 100%;
+  border-collapse: collapse;
+  font-size: 0.875rem;
+}
+
+.mint-lcms-sequence-table__th,
+.mint-lcms-sequence-table__td,
+.mint-lcms-sequence-table__drag-header,
+.mint-lcms-sequence-table__drag-cell,
+.mint-lcms-sequence-table__actions-header,
+.mint-lcms-sequence-table__actions {
+  border-bottom: 1px solid var(--border-light, var(--border-color, #e2e8f0));
+  padding: 0.5rem 0.75rem;
+  vertical-align: middle;
+}
+
+.mint-lcms-sequence-table__th {
+  color: var(--text-secondary, #475569);
+  font-size: 0.8125rem;
+  font-weight: 700;
+  text-align: left;
+  white-space: nowrap;
+}
+
+.mint-lcms-sequence-table__th--right,
+.mint-lcms-sequence-table__td--right {
+  text-align: right;
+}
+
+.mint-lcms-sequence-table__row {
+  transition: background 120ms ease-out, opacity 120ms ease-out, box-shadow 120ms ease-out;
+}
+
+.mint-lcms-sequence-table__row:hover {
+  background: color-mix(in srgb, var(--mint-info, #3b82f6) 4%, transparent);
+}
+
+.mint-lcms-sequence-table__row--dragging {
+  opacity: 0.35;
+}
+
+.mint-lcms-sequence-table__row--drop-above {
+  box-shadow: inset 0 2px 0 0 var(--mint-info, #3b82f6);
+}
+
+.mint-lcms-sequence-table__row--drop-below {
+  box-shadow: inset 0 -2px 0 0 var(--mint-info, #3b82f6);
+}
+
+.mint-lcms-sequence-table__drag-header,
+.mint-lcms-sequence-table__drag-cell {
+  width: 1.5rem;
+  padding-left: 0.25rem;
+  padding-right: 0.25rem;
+}
+
+.mint-lcms-sequence-table__drag-handle {
+  color: var(--text-muted, #64748b);
+  cursor: grab;
+  font-family: var(--font-mono, 'Fira Code', monospace);
+  font-size: 0.875rem;
+  letter-spacing: -0.08em;
+}
+
+.mint-lcms-sequence-table__td {
+  min-width: 0;
+  color: var(--text-primary, #0f172a);
+}
+
+.mint-lcms-sequence-table__td--index,
+.mint-lcms-sequence-table__td--file_name,
+.mint-lcms-sequence-table__td--instrument_method,
+.mint-lcms-sequence-table__td--injection_volume {
+  font-family: var(--font-mono, 'Fira Code', monospace);
+}
+
+.mint-lcms-sequence-table__td--index,
+.mint-lcms-sequence-table__td--instrument_method {
+  color: var(--text-muted, #64748b);
+}
+
+.mint-lcms-sequence-table__td--file_name,
+.mint-lcms-sequence-table__td--instrument_method {
+  max-width: 18rem;
+  overflow: hidden;
+  text-overflow: ellipsis;
+  white-space: nowrap;
+}
+
+.mint-lcms-sequence-table__type {
+  display: inline-flex;
+  align-items: center;
+  border-radius: 0.25rem;
+  font-size: 0.75rem;
+  font-weight: 700;
+  line-height: 1.2;
+  padding: 0.125rem 0.5rem;
+  white-space: nowrap;
+}
+
+.mint-lcms-sequence-table__type--blank {
+  background: color-mix(in srgb, var(--color-cta, #f97316) 15%, transparent);
+  color: var(--color-cta, #f97316);
+}
+
+.mint-lcms-sequence-table__type--qc {
+  background: color-mix(in srgb, var(--color-purple, #8b5cf6) 15%, transparent);
+  color: var(--color-purple, #8b5cf6);
+}
+
+.mint-lcms-sequence-table__type--sample {
+  background: var(--bg-tertiary, #e2e8f0);
+  color: var(--text-secondary, #475569);
+}
+
+.mint-lcms-sequence-table__actions-header,
+.mint-lcms-sequence-table__actions {
+  width: 4rem;
+  padding-left: 0.25rem;
+  padding-right: 0.25rem;
+}
+
+.mint-lcms-sequence-table__actions {
+  display: flex;
+  align-items: center;
+  justify-content: flex-end;
+  gap: 0.25rem;
+}
+
+.mint-lcms-sequence-table__action {
+  display: inline-flex;
+  width: 1.375rem;
+  height: 1.375rem;
+  align-items: center;
+  justify-content: center;
+  border: 0;
+  border-radius: 0.25rem;
+  background: transparent;
+  color: var(--mint-info, #3b82f6);
+  cursor: pointer;
+  font-size: 0.875rem;
+  font-weight: 700;
+  line-height: 1;
+  opacity: 0.6;
+  transition: background 120ms ease-out, opacity 120ms ease-out;
+}
+
+.mint-lcms-sequence-table__action:hover {
+  background: color-mix(in srgb, var(--mint-info, #3b82f6) 10%, transparent);
+  opacity: 1;
+}
+
+.mint-lcms-sequence-table__action--danger {
+  color: var(--mint-error, #ef4444);
+}
+
+.mint-lcms-sequence-table__action--danger:hover {
+  background: color-mix(in srgb, var(--mint-error, #ef4444) 10%, transparent);
+}
+
+.mint-lcms-sequence-table__empty,
+.mint-lcms-sequence-table__more {
+  color: var(--text-muted, #64748b);
+  font-size: 0.875rem;
+  padding: 1rem;
+  text-align: center;
+}
+
+.mint-lcms-sequence-table__more {
+  border-top: 1px solid var(--border-color, #e2e8f0);
+  padding: 0.625rem 1rem;
+}
+
+@media (prefers-reduced-motion: reduce) {
+  .mint-lcms-sequence-table__row,
+  .mint-lcms-sequence-table__action {
+    transition: none;
+  }
+}