@monoes/monograph 1.5.6 → 1.5.8

package/dist/src/lsp/server.js

@@ -1,3 +1,4 @@
+import { closeDb } from '../storage/db.js';
 const FILE_RANGE = {
     start: { line: 0, character: 0 },
     end: { line: 0, character: 0 },
@@ -9,7 +10,9 @@ export function buildDiagnosticsFromDb(db, repoRoot) {
         if (filePath.startsWith('/')) {
             return `file://${filePath}`;
         }
-        return `file:///${normRoot}/${filePath}`.replace(/\/+/g, '/').replace(/^file:\/\/\//, 'file:///');
+        return `file:///${normRoot}/${filePath}`
+            .replace(/\/+/g, '/')
+            .replace(/^file:\/\/\//, 'file:///');
     }
     function addDiag(filePath, diag) {
         const uri = uriForPath(filePath);
@@ -19,9 +22,11 @@ export function buildDiagnosticsFromDb(db, repoRoot) {
     }
     // Unreachable files → Warning
     try {
-        const unreachableFiles = db.prepare(`SELECT file_path FROM nodes
+        const unreachableFiles = db
+            .prepare(`SELECT file_path FROM nodes
        WHERE label = 'File'
-         AND json_extract(properties, '$.reachabilityRole') = 'unreachable'`).all();
+         AND json_extract(properties, '$.reachabilityRole') = 'unreachable'`)
+            .all();
         for (const row of unreachableFiles) {
             if (!row.file_path)
                 continue;
@@ -43,8 +48,10 @@ export function buildDiagnosticsFromDb(db, repoRoot) {
     try {
         // Use p95 fan-in as the threshold (consistent with god-nodes pipeline phase)
         const GOD_NODE_DEGREE_THRESHOLD = 10; // fallback if we can't compute from DB
-        const fanInRows = db.prepare(`SELECT target_id, COUNT(*) as c FROM edges GROUP BY target_id`).all();
-        const sorted = fanInRows.map(r => r.c).sort((a, b) => a - b);
+        const fanInRows = db
+            .prepare(`SELECT target_id, COUNT(*) as c FROM edges GROUP BY target_id`)
+            .all();
+        const sorted = fanInRows.map((r) => r.c).sort((a, b) => a - b);
         let threshold = GOD_NODE_DEGREE_THRESHOLD;
         if (sorted.length > 0) {
             const idx = Math.min(Math.floor(0.95 * sorted.length), sorted.length - 1);
@@ -54,12 +61,14 @@ export function buildDiagnosticsFromDb(db, repoRoot) {
         for (const row of fanInRows) {
             fanInByNode.set(row.target_id, row.c);
         }
-        const godNodeRows = db.prepare(`SELECT n.id, n.file_path, COUNT(e.source_id) as fan_in
+        const godNodeRows = db
+            .prepare(`SELECT n.id, n.file_path, COUNT(e.source_id) as fan_in
        FROM nodes n
        JOIN edges e ON e.target_id = n.id
        WHERE n.label = 'File'
        GROUP BY n.id
-       HAVING COUNT(e.source_id) > ?`).all(threshold);
+       HAVING COUNT(e.source_id) > ?`)
+            .all(threshold);
         const totalNodes = db.prepare('SELECT COUNT(*) as n FROM nodes').get().n;
         for (const row of godNodeRows) {
             if (!row.file_path)
@@ -81,12 +90,14 @@ export function buildDiagnosticsFromDb(db, repoRoot) {
     }
     // STRUCTURALLY_SIMILAR edges → Information
     try {
-        const similarEdges = db.prepare(`SELECT e.source_id, e.target_id, e.confidence_score,
+        const similarEdges = db
+            .prepare(`SELECT e.source_id, e.target_id, e.confidence_score,
               ns.file_path as source_path, nt.file_path as target_path
        FROM edges e
        JOIN nodes ns ON ns.id = e.source_id
        JOIN nodes nt ON nt.id = e.target_id
-       WHERE e.relation = 'STRUCTURALLY_SIMILAR'`).all();
+       WHERE e.relation = 'STRUCTURALLY_SIMILAR'`)
+            .all();
         for (const row of similarEdges) {
             if (!row.source_path || !row.target_path)
                 continue;
@@ -130,7 +141,11 @@ export function startLspServer(db, repoRoot) {
     // LSP header framing: read Content-Length header, then body
     let buffer = Buffer.alloc(0);
     let expectedLength = null;
-    process.stdin.on('data', (chunk) => {
+    // MONO-7: track registered listeners so the 'shutdown' handler can remove them
+    // (otherwise the process holds open stdin listeners + the DB handle forever,
+    // and only `process.exit(0)` on the 'exit' notification or stdin-end reclaims them).
+    let shutdownRequested = false;
+    const onData = (chunk) => {
         buffer = Buffer.concat([buffer, chunk]);
         while (true) {
             if (expectedLength === null) {
@@ -175,9 +190,26 @@ export function startLspServer(db, repoRoot) {
                     publishDiagnostics(diagnosticsMap);
                     break;
                 case 'shutdown':
+                    // MONO-7: send the response, then release the DB handle so the native
+                    // better-sqlite3 file lock is freed. Listeners stay attached so the
+                    // subsequent 'exit' notification still parses and reaches its handler
+                    // (LSP spec: shutdown only means "no more requests"; exit drives termination).
+                    // Final listener removal happens in the 'exit'/stdin-end path.
                     sendResponse(id ?? null, null);
+                    if (!shutdownRequested) {
+                        shutdownRequested = true;
+                        try {
+                            closeDb(db);
+                        }
+                        catch {
+                            /* best-effort — may already be closed */
+                        }
+                    }
                     break;
                 case 'exit':
+                    // MONO-7: now safe to remove listeners before terminating.
+                    process.stdin.removeListener('data', onData);
+                    process.stdin.removeListener('end', onEnd);
                     process.exit(0);
                     break;
                 default:
@@ -192,9 +224,12 @@ export function startLspServer(db, repoRoot) {
                     break;
             }
         }
-    });
-    process.stdin.on('end', () => {
+    };
+    const onEnd = () => {
+        process.stdin.removeListener('data', onData);
         process.exit(0);
-    });
+    };
+    process.stdin.on('data', onData);
+    process.stdin.on('end', onEnd);
 }
 //# sourceMappingURL=server.js.map

package/dist/src/lsp/server.js.map

@@ -1 +1 @@
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package/dist/src/mcp-tools/api-impact.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"api-impact.d.ts","sourceRoot":"","sources":["../../../src/mcp-tools/api-impact.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,QAAQ,MAAM,gBAAgB,CAAC;AAC3C,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,aAAa,CAAC;AAsBjD,MAAM,WAAW,wBAAwB;IACvC,KAAK,EAAE;QAAE,MAAM,EAAE,MAAM,CAAC;QAAC,IAAI,EAAE,MAAM,CAAC;QAAC,MAAM,EAAE,MAAM,CAAA;KAAE,GAAG,IAAI,CAAC;IAC/D,OAAO,EAAE,aAAa,GAAG,IAAI,CAAC;IAC9B,OAAO,EAAE,KAAK,CAAC;QAAE,KAAK,EAAE,MAAM,CAAC;QAAC,IAAI,EAAE,aAAa,CAAA;KAAE,CAAC,CAAC;IACvD,iBAAiB,EAAE,KAAK,CAAC;QAAE,EAAE,EAAE,MAAM,CAAC;QAAC,IAAI,EAAE,MAAM,CAAA;KAAE,CAAC,CAAC;IACvD,SAAS,EAAE,MAAM,CAAC;CACnB;AAoCD,wBAAgB,qBAAqB,CACnC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EACrB,KAAK,EAAE;IAAE,SAAS,EAAE,MAAM,CAAC;IAAC,MAAM,CAAC,EAAE,MAAM,CAAA;CAAE,GAC5C,wBAAwB,CAgH1B"}
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package/dist/src/mcp-tools/api-impact.js

@@ -1,19 +1,4 @@
-// ── Row → MonographNode mapper ─────────────────────────────────────────────────
-function rowToNode(row) {
-    return {
-        id: row.id,
-        label: row.label,
-        name: row.name,
-        normLabel: row.norm_label,
-        filePath: row.file_path,
-        startLine: row.start_line,
-        endLine: row.end_line,
-        communityId: row.community_id,
-        isExported: row.is_exported === 1,
-        language: row.language,
-        properties: row.properties ? JSON.parse(row.properties) : undefined,
-    };
-}
+import { rowToNode } from '../storage/node-store.js';
 // ── Forward BFS on CALLS edges ─────────────────────────────────────────────────
 function forwardBfs(startId, db, maxDepth) {
     const visited = new Map([[startId, 0]]);

package/dist/src/mcp-tools/api-impact.js.map

@@ -1 +1 @@
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package/dist/src/mcp-tools/context.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"context.d.ts","sourceRoot":"","sources":["../../../src/mcp-tools/context.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,QAAQ,MAAM,gBAAgB,CAAC;AAC3C,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,aAAa,CAAC;AAsBjD,MAAM,WAAW,sBAAsB;IACrC,IAAI,EAAE,aAAa,GAAG,IAAI,CAAC;IAC3B,OAAO,EAAE,aAAa,EAAE,CAAC;IACzB,OAAO,EAAE,aAAa,EAAE,CAAC;IACzB,OAAO,EAAE,aAAa,EAAE,CAAC;IACzB,UAAU,EAAE,aAAa,EAAE,CAAC;IAC5B,SAAS,EAAE;QAAE,EAAE,EAAE,MAAM,CAAC;QAAC,KAAK,CAAC,EAAE,MAAM,CAAA;KAAE,GAAG,IAAI,CAAC;IACjD,WAAW,EAAE,KAAK,CAAC;QAAE,EAAE,EAAE,MAAM,CAAC;QAAC,IAAI,EAAE,MAAM,CAAA;KAAE,CAAC,CAAC;CAClD;AA6BD,wBAAgB,mBAAmB,CACjC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EACrB,KAAK,EAAE;IAAE,IAAI,EAAE,MAAM,CAAC;IAAC,QAAQ,CAAC,EAAE,MAAM,CAAA;CAAE,GACzC,sBAAsB,CA+CxB"}
+{"version":3,"file":"context.d.ts","sourceRoot":"","sources":["../../../src/mcp-tools/context.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,QAAQ,MAAM,gBAAgB,CAAC;AAC3C,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,aAAa,CAAC;AAKjD,MAAM,WAAW,sBAAsB;IACrC,IAAI,EAAE,aAAa,GAAG,IAAI,CAAC;IAC3B,OAAO,EAAE,aAAa,EAAE,CAAC;IACzB,OAAO,EAAE,aAAa,EAAE,CAAC;IACzB,OAAO,EAAE,aAAa,EAAE,CAAC;IACzB,UAAU,EAAE,aAAa,EAAE,CAAC;IAC5B,SAAS,EAAE;QAAE,EAAE,EAAE,MAAM,CAAC;QAAC,KAAK,CAAC,EAAE,MAAM,CAAA;KAAE,GAAG,IAAI,CAAC;IACjD,WAAW,EAAE,KAAK,CAAC;QAAE,EAAE,EAAE,MAAM,CAAC;QAAC,IAAI,EAAE,MAAM,CAAA;KAAE,CAAC,CAAC;CAClD;AA2BD,wBAAgB,mBAAmB,CACjC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EACrB,KAAK,EAAE;IAAE,IAAI,EAAE,MAAM,CAAC;IAAC,QAAQ,CAAC,EAAE,MAAM,CAAA;CAAE,GACzC,sBAAsB,CAuDxB"}

package/dist/src/mcp-tools/context.js

@@ -1,26 +1,9 @@
-// ── Row → MonographNode mapper ─────────────────────────────────────────────────
-function rowToNode(row) {
-    return {
-        id: row.id,
-        label: row.label,
-        name: row.name,
-        normLabel: row.norm_label,
-        filePath: row.file_path,
-        startLine: row.start_line,
-        endLine: row.end_line,
-        communityId: row.community_id,
-        isExported: row.is_exported === 1,
-        language: row.language,
-        properties: row.properties ? JSON.parse(row.properties) : undefined,
-    };
-}
+import { rowToNode } from '../storage/node-store.js';
 // ── Shared helper: query related nodes by edge relation and direction ──────────
 function queryRelated(db, nodeId, relation, inbound, limit = 50) {
     // inbound=true  → this node is the target; source nodes are the result
     // inbound=false → this node is the source; target nodes are the result
-    const [filterCol, joinCol] = inbound
-        ? ['target_id', 'source_id']
-        : ['source_id', 'target_id'];
+    const [filterCol, joinCol] = inbound ? ['target_id', 'source_id'] : ['source_id', 'target_id'];
     const rows = db
         .prepare(`SELECT n.* FROM nodes n JOIN edges e ON n.id = e.${joinCol}
        WHERE e.${filterCol} = ? AND e.relation = ? LIMIT ?`)
@@ -38,12 +21,18 @@ export function getMonographContext(db, input) {
             .get(input.name, input.filePath);
     }
     else {
-        nodeRow = db
-            .prepare('SELECT * FROM nodes WHERE name = ? LIMIT 1')
-            .get(input.name);
+        nodeRow = db.prepare('SELECT * FROM nodes WHERE name = ? LIMIT 1').get(input.name);
     }
     if (!nodeRow) {
-        return { node: null, callers: [], callees: [], imports: [], importedBy: [], community: null, inProcesses: [] };
+        return {
+            node: null,
+            callers: [],
+            callees: [],
+            imports: [],
+            importedBy: [],
+            community: null,
+            inProcesses: [],
+        };
     }
     const node = rowToNode(nodeRow);
     const nodeId = node.id;

package/dist/src/mcp-tools/context.js.map

@@ -1 +1 @@
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package/dist/src/mcp-tools/explain.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"explain.d.ts","sourceRoot":"","sources":["../../../src/mcp-tools/explain.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,QAAQ,MAAM,gBAAgB,CAAC;AAC3C,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,aAAa,CAAC;AAkBjD,MAAM,WAAW,aAAa;IAC5B,IAAI,EAAE,aAAa,GAAG,IAAI,CAAC;IAC3B,WAAW,EAAE,MAAM,GAAG,IAAI,CAAC;IAC3B,eAAe,EAAE,MAAM,CAAC;CACzB;AAED,wBAAgB,WAAW,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,IAAI,EAAE,MAAM,GAAG,aAAa,CAuC9E"}
+{"version":3,"file":"explain.d.ts","sourceRoot":"","sources":["../../../src/mcp-tools/explain.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,QAAQ,MAAM,gBAAgB,CAAC;AAC3C,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,aAAa,CAAC;AAGjD,MAAM,WAAW,aAAa;IAC5B,IAAI,EAAE,aAAa,GAAG,IAAI,CAAC;IAC3B,WAAW,EAAE,MAAM,GAAG,IAAI,CAAC;IAC3B,eAAe,EAAE,MAAM,CAAC;CACzB;AAED,wBAAgB,WAAW,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,IAAI,EAAE,MAAM,GAAG,aAAa,CAkD9E"}

package/dist/src/mcp-tools/explain.js

@@ -1,39 +1,34 @@
-function rowToNode(row) {
-    return {
-        id: row['id'],
-        label: row['label'],
-        name: row['name'],
-        normLabel: row['norm_label'] ?? '',
-        filePath: row['file_path'],
-        startLine: row['start_line'],
-        endLine: row['end_line'],
-        communityId: row['community_id'],
-        isExported: row['is_exported'] === 1,
-        language: row['language'],
-        properties: row['properties'] ? JSON.parse(row['properties']) : undefined,
-    };
-}
+import { rowToNode } from '../storage/node-store.js';
 export function explainNode(db, name) {
     const nodeRow = db.prepare('SELECT * FROM nodes WHERE name = ? LIMIT 1').get(name);
     if (!nodeRow)
         return { node: null, explanation: null, connectionCount: 0 };
     const node = rowToNode(nodeRow);
     // Get outbound connections
-    const outRows = db.prepare(`SELECT n.name, e.relation FROM nodes n JOIN edges e ON n.id = e.target_id WHERE e.source_id = ? LIMIT 10`).all(node.id);
+    const outRows = db
+        .prepare(`SELECT n.name, e.relation FROM nodes n JOIN edges e ON n.id = e.target_id WHERE e.source_id = ? LIMIT 10`)
+        .all(node.id);
     // Get inbound connections
-    const inRows = db.prepare(`SELECT n.name, e.relation FROM nodes n JOIN edges e ON n.id = e.source_id WHERE e.target_id = ? LIMIT 10`).all(node.id);
+    const inRows = db
+        .prepare(`SELECT n.name, e.relation FROM nodes n JOIN edges e ON n.id = e.source_id WHERE e.target_id = ? LIMIT 10`)
+        .all(node.id);
     const connectionCount = outRows.length + inRows.length;
     const fileRef = node.filePath
-        ? (node.startLine != null ? `${node.filePath}:${node.startLine}` : node.filePath)
+        ? node.startLine != null
+            ? `${node.filePath}:${node.startLine}`
+            : node.filePath
         : null;
     const fileLine = fileRef ? ` defined in \`${fileRef}\`` : '';
     let explanation = `**${node.name}** is a ${node.label}${fileLine}.`;
     if (outRows.length > 0) {
-        const outList = outRows.map(r => `\`${r.name}\` (${r.relation})`).join(', ');
+        const outList = outRows.map((r) => `\`${r.name}\` (${r.relation})`).join(', ');
         explanation += ` It connects to: ${outList}.`;
     }
     if (inRows.length > 0) {
-        const inList = inRows.map(r => `\`${r.name}\``).slice(0, 5).join(', ');
+        const inList = inRows
+            .map((r) => `\`${r.name}\``)
+            .slice(0, 5)
+            .join(', ');
         explanation += ` Referenced by: ${inList}.`;
     }
     if (node.communityId != null) {

package/dist/src/mcp-tools/explain.js.map

@@ -1 +1 @@
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+{"version":3,"file":"explain.js","sourceRoot":"","sources":["../../../src/mcp-tools/explain.ts"],"names":[],"mappings":"AAEA,OAAO,EAAE,SAAS,EAAE,MAAM,0BAA0B,CAAC;AAQrD,MAAM,UAAU,WAAW,CAAC,EAAqB,EAAE,IAAY;IAC7D,MAAM,OAAO,GAAG,EAAE,CAAC,OAAO,CAAC,4CAA4C,CAAC,CAAC,GAAG,CAAC,IAAI,CAEpE,CAAC;IACd,IAAI,CAAC,OAAO;QAAE,OAAO,EAAE,IAAI,EAAE,IAAI,EAAE,WAAW,EAAE,IAAI,EAAE,eAAe,EAAE,CAAC,EAAE,CAAC;IAE3E,MAAM,IAAI,GAAG,SAAS,CAAC,OAAO,CAAC,CAAC;IAEhC,2BAA2B;IAC3B,MAAM,OAAO,GAAG,EAAE;SACf,OAAO,CACN,0GAA0G,CAC3G;SACA,GAAG,CAAC,IAAI,CAAC,EAAE,CAAyC,CAAC;IAExD,0BAA0B;IAC1B,MAAM,MAAM,GAAG,EAAE;SACd,OAAO,CACN,0GAA0G,CAC3G;SACA,GAAG,CAAC,IAAI,CAAC,EAAE,CAAyC,CAAC;IAExD,MAAM,eAAe,GAAG,OAAO,CAAC,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC;IACvD,MAAM,OAAO,GAAG,IAAI,CAAC,QAAQ;QAC3B,CAAC,CAAC,IAAI,CAAC,SAAS,IAAI,IAAI;YACtB,CAAC,CAAC,GAAG,IAAI,CAAC,QAAQ,IAAI,IAAI,CAAC,SAAS,EAAE;YACtC,CAAC,CAAC,IAAI,CAAC,QAAQ;QACjB,CAAC,CAAC,IAAI,CAAC;IACT,MAAM,QAAQ,GAAG,OAAO,CAAC,CAAC,CAAC,iBAAiB,OAAO,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC;IAE7D,IAAI,WAAW,GAAG,KAAK,IAAI,CAAC,IAAI,WAAW,IAAI,CAAC,KAAK,GAAG,QAAQ,GAAG,CAAC;IAEpE,IAAI,OAAO,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC;QACvB,MAAM,OAAO,GAAG,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,KAAK,CAAC,CAAC,IAAI,OAAO,CAAC,CAAC,QAAQ,GAAG,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;QAC/E,WAAW,IAAI,oBAAoB,OAAO,GAAG,CAAC;IAChD,CAAC;IAED,IAAI,MAAM,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC;QACtB,MAAM,MAAM,GAAG,MAAM;aAClB,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,KAAK,CAAC,CAAC,IAAI,IAAI,CAAC;aAC3B,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC;aACX,IAAI,CAAC,IAAI,CAAC,CAAC;QACd,WAAW,IAAI,mBAAmB,MAAM,GAAG,CAAC;IAC9C,CAAC;IAED,IAAI,IAAI,CAAC,WAAW,IAAI,IAAI,EAAE,CAAC;QAC7B,WAAW,IAAI,sBAAsB,IAAI,CAAC,WAAW,GAAG,CAAC;IAC3D,CAAC;IAED,OAAO,EAAE,IAAI,EAAE,WAAW,EAAE,eAAe,EAAE,CAAC;AAChD,CAAC"}

package/dist/src/mcp-tools/graph-query.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"graph-query.d.ts","sourceRoot":"","sources":["../../../src/mcp-tools/graph-query.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,QAAQ,MAAM,gBAAgB,CAAC;AAC3C,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,aAAa,CAAC;AAkBjD,MAAM,WAAW,eAAe;IAC9B,KAAK,EAAE,MAAM,CAAC;IACd,IAAI,CAAC,EAAE,KAAK,GAAG,KAAK,CAAC;IACrB,mHAAmH;IACnH,SAAS,CAAC,EAAE,KAAK,GAAG,IAAI,GAAG,MAAM,CAAC;IAClC,WAAW,CAAC,EAAE,MAAM,CAAC;IACrB,KAAK,CAAC,EAAE,MAAM,CAAC;CAChB;AAED,MAAM,WAAW,gBAAgB;IAC/B,KAAK,EAAE,aAAa,EAAE,CAAC;IACvB,IAAI,EAAE,KAAK,GAAG,KAAK,CAAC;IACpB,SAAS,EAAE,OAAO,CAAC;IACnB,aAAa,EAAE,MAAM,CAAC;CACvB;AAMD,wBAAgB,UAAU,CACxB,EAAE,EAAE,QAAQ,CAAC,QAAQ,EACrB,KAAK,EAAE,eAAe,GACrB,gBAAgB,CAqFlB"}
+{"version":3,"file":"graph-query.d.ts","sourceRoot":"","sources":["../../../src/mcp-tools/graph-query.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,QAAQ,MAAM,gBAAgB,CAAC;AAC3C,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,aAAa,CAAC;AAGjD,MAAM,WAAW,eAAe;IAC9B,KAAK,EAAE,MAAM,CAAC;IACd,IAAI,CAAC,EAAE,KAAK,GAAG,KAAK,CAAC;IACrB,mHAAmH;IACnH,SAAS,CAAC,EAAE,KAAK,GAAG,IAAI,GAAG,MAAM,CAAC;IAClC,WAAW,CAAC,EAAE,MAAM,CAAC;IACrB,KAAK,CAAC,EAAE,MAAM,CAAC;CAChB;AAED,MAAM,WAAW,gBAAgB;IAC/B,KAAK,EAAE,aAAa,EAAE,CAAC;IACvB,IAAI,EAAE,KAAK,GAAG,KAAK,CAAC;IACpB,SAAS,EAAE,OAAO,CAAC;IACnB,aAAa,EAAE,MAAM,CAAC;CACvB;AAMD,wBAAgB,UAAU,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,KAAK,EAAE,eAAe,GAAG,gBAAgB,CAgG1F"}

package/dist/src/mcp-tools/graph-query.js

@@ -1,18 +1,4 @@
-function rowToNode(row) {
-    return {
-        id: row['id'],
-        label: row['label'],
-        name: row['name'],
-        normLabel: row['norm_label'] ?? '',
-        filePath: row['file_path'],
-        startLine: row['start_line'],
-        endLine: row['end_line'],
-        communityId: row['community_id'],
-        isExported: row['is_exported'] === 1,
-        language: row['language'],
-        properties: row['properties'] ? JSON.parse(row['properties']) : undefined,
-    };
-}
+import { rowToNode } from '../storage/node-store.js';
 function estimateTokens(nodes) {
     return nodes.reduce((acc, n) => acc + n.name.length + (n.filePath?.length ?? 0) + 20, 0);
 }
@@ -22,7 +8,9 @@ export function queryGraph(db, input) {
     const tokenBudget = input.tokenBudget ?? 2000;
     const maxDepth = input.depth ?? 3;
     // Find seed nodes matching the query
-    const seedRows = db.prepare(`SELECT * FROM nodes WHERE name LIKE ? OR label LIKE ? LIMIT 20`).all(`%${input.query}%`, `%${input.query}%`);
+    const seedRows = db
+        .prepare(`SELECT * FROM nodes WHERE name LIKE ? OR label LIKE ? LIMIT 20`)
+        .all(`%${input.query}%`, `%${input.query}%`);
     const seeds = seedRows.map(rowToNode);
     const visited = new Map();
     const result = [];
@@ -39,7 +27,10 @@ export function queryGraph(db, input) {
     }
     if (!truncated) {
         // BFS or DFS expansion
-        const frontier = seeds.map(s => ({ id: s.id, depth: 0 }));
+        const frontier = seeds.map((s) => ({
+            id: s.id,
+            depth: 0,
+        }));
         // Prepare edge traversal statements for each direction.
         // 'out' follows outgoing edges (what this node calls/imports/uses).
         // 'in' follows incoming edges (what calls/imports/uses this node).
@@ -54,8 +45,8 @@ export function queryGraph(db, input) {
             // 'both': union of outgoing and incoming, deduplicated by id
             const outRows = outEdgeStmt.all(id);
             const inRows = inEdgeStmt.all(id);
-            const seen = new Set(outRows.map(r => r['id']));
-            return [...outRows, ...inRows.filter(r => !seen.has(r['id']))];
+            const seen = new Set(outRows.map((r) => r['id']));
+            return [...outRows, ...inRows.filter((r) => !seen.has(r['id']))];
         };
         if (mode === 'bfs') {
             while (frontier.length > 0 && !truncated) {

package/dist/src/mcp-tools/graph-query.js.map

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package/dist/src/mcp-tools/impact.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"impact.d.ts","sourceRoot":"","sources":["../../../src/mcp-tools/impact.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,QAAQ,MAAM,gBAAgB,CAAC;AAC3C,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,aAAa,CAAC;AAKjD,MAAM,MAAM,SAAS,GAAG,KAAK,GAAG,QAAQ,GAAG,MAAM,GAAG,UAAU,CAAC;AAE/D,wBAAgB,gBAAgB,CAAC,SAAS,EAAE,MAAM,GAAG,SAAS,CAK7D;AAID,MAAM,WAAW,aAAa;IAC5B,kBAAkB,CAAC,EAAE,MAAM,CAAC;IAC5B,aAAa,CAAC,EAAE,MAAM,EAAE,CAAC;IACzB,QAAQ,CAAC,EAAE,MAAM,CAAC;CACnB;AAID,MAAM,WAAW,qBAAqB;IACpC,IAAI,EAAE,aAAa,GAAG,IAAI,CAAC;IAC3B,aAAa,EAAE,aAAa,EAAE,CAAC;IAC/B,iBAAiB,EAAE,KAAK,CAAC;QAAE,KAAK,EAAE,MAAM,CAAC;QAAC,KAAK,EAAE,aAAa,EAAE,CAAA;KAAE,CAAC,CAAC;IACpE,aAAa,EAAE,MAAM,EAAE,CAAC;IACxB,SAAS,EAAE,MAAM,CAAC;IAClB,SAAS,EAAE,SAAS,CAAC;CACtB;AAuDD,wBAAgB,kBAAkB,CAChC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EACrB,KAAK,EAAE;IAAE,IAAI,EAAE,MAAM,CAAC;IAAC,QAAQ,CAAC,EAAE,MAAM,CAAC;IAAC,KAAK,CAAC,EAAE,MAAM,CAAA;CAAE,GACzD,qBAAqB,CAgCvB;AAmDD,wBAAsB,eAAe,CACnC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EACrB,MAAM,EAAE,MAAM,EACd,OAAO,GAAE,aAAkB,GAC1B,OAAO,CAAC,qBAAqB,CAAC,CAqBhC"}

package/dist/src/mcp-tools/impact.js

@@ -1,19 +1,4 @@
-// ── Row → MonographNode mapper ─────────────────────────────────────────────────
-function rowToNode(row) {
-    return {
-        id: row.id,
-        label: row.label,
-        name: row.name,
-        normLabel: row.norm_label,
-        filePath: row.file_path,
-        startLine: row.start_line,
-        endLine: row.end_line,
-        communityId: row.community_id,
-        isExported: row.is_exported === 1,
-        language: row.language,
-        properties: row.properties ? JSON.parse(row.properties) : undefined,
-    };
-}
+import { getNodesByIds, rowToNode } from '../storage/node-store.js';
 export function computeRiskLevel(riskScore) {
     if (riskScore > 0.75)
         return 'CRITICAL';
@@ -33,12 +18,16 @@ function reverseBfs(startNodeId, db, maxDepth, options = {}) {
     // reports "0 symbols affected, risk LOW" for changes that are anything but low
     // risk. Callers that need the old narrow/fast behavior can still pass
     // relationTypes: ['CALLS'] explicitly.
-    const relations = options.relationTypes ?? ['CALLS', 'IMPORTS', 'REFERENCES', 'EXTENDS', 'RE_EXPORTS'];
+    const relations = options.relationTypes ?? [
+        'CALLS',
+        'IMPORTS',
+        'REFERENCES',
+        'EXTENDS',
+        'RE_EXPORTS',
+    ];
     const placeholders = relations.map(() => '?').join(',');
     const baseQuery = `SELECT source_id FROM edges WHERE target_id = ? AND relation IN (${placeholders})`;
-    const query = options.minConfidenceScore !== undefined
-        ? `${baseQuery} AND confidence_score >= ?`
-        : baseQuery;
+    const query = options.minConfidenceScore !== undefined ? `${baseQuery} AND confidence_score >= ?` : baseQuery;
     const stmt = db.prepare(query);
     while (queue.length > 0) {
         const { id, depth } = queue.shift();
@@ -69,12 +58,17 @@ export function getMonographImpact(db, input) {
             .get(input.name, input.filePath);
     }
     else {
-        nodeRow = db
-            .prepare('SELECT * FROM nodes WHERE name = ? LIMIT 1')
-            .get(input.name);
+        nodeRow = db.prepare('SELECT * FROM nodes WHERE name = ? LIMIT 1').get(input.name);
     }
     if (!nodeRow) {
-        return { node: null, directCallers: [], transitiveCallers: [], affectedFiles: [], riskScore: 0, riskLevel: 'LOW' };
+        return {
+            node: null,
+            directCallers: [],
+            transitiveCallers: [],
+            affectedFiles: [],
+            riskScore: 0,
+            riskLevel: 'LOW',
+        };
     }
     const node = rowToNode(nodeRow);
     const nodeId = node.id;
@@ -82,16 +76,6 @@ export function getMonographImpact(db, input) {
     const visited = reverseBfs(nodeId, db, maxDepth, {});
     return { node, ...extractCallerResult(db, nodeId, visited) };
 }
-// ── Shared helper: fetch nodes by IDs in a single query ───────────────────────
-function getNodesByIds(db, ids) {
-    if (ids.length === 0)
-        return [];
-    const placeholders = ids.map(() => '?').join(',');
-    const rows = db
-        .prepare(`SELECT * FROM nodes WHERE id IN (${placeholders})`)
-        .all(...ids);
-    return rows.map(rowToNode);
-}
 // ── Shared helper: turn a visited map into structured caller lists ─────────────
 function extractCallerResult(db, startNodeId, visited) {
     const directCallerIds = [];
@@ -114,21 +98,34 @@ function extractCallerResult(db, startNodeId, visited) {
     for (const depth of sortedDepths) {
         transitiveCallers.push({ depth, nodes: getNodesByIds(db, byDepth.get(depth)) });
     }
-    const allAffectedNodes = [...directCallers, ...transitiveCallers.flatMap(t => t.nodes)];
-    const affectedFiles = [...new Set(allAffectedNodes.map(n => n.filePath).filter((p) => p != null))];
+    const allAffectedNodes = [...directCallers, ...transitiveCallers.flatMap((t) => t.nodes)];
+    const affectedFiles = [
+        ...new Set(allAffectedNodes.map((n) => n.filePath).filter((p) => p != null)),
+    ];
     const totalCallerCount = visited.size - 1; // exclude start node
     const rawScore = Math.min(Math.log2(totalCallerCount + 1), 10);
     const riskScore = rawScore / 10;
-    return { directCallers, transitiveCallers, affectedFiles, riskScore, riskLevel: computeRiskLevel(riskScore) };
+    return {
+        directCallers,
+        transitiveCallers,
+        affectedFiles,
+        riskScore,
+        riskLevel: computeRiskLevel(riskScore),
+    };
 }
 // ── id-based impact with filtering options ────────────────────────────────────
 export async function monographImpact(db, nodeId, options = {}) {
     const maxDepth = Math.min(options.maxDepth ?? 3, 6);
-    const nodeRow = db
-        .prepare('SELECT * FROM nodes WHERE id = ? LIMIT 1')
-        .get(nodeId);
+    const nodeRow = db.prepare('SELECT * FROM nodes WHERE id = ? LIMIT 1').get(nodeId);
     if (!nodeRow) {
-        return { node: null, directCallers: [], transitiveCallers: [], affectedFiles: [], riskScore: 0, riskLevel: 'LOW' };
+        return {
+            node: null,
+            directCallers: [],
+            transitiveCallers: [],
+            affectedFiles: [],
+            riskScore: 0,
+            riskLevel: 'LOW',
+        };
     }
     const node = rowToNode(nodeRow);
     const visited = reverseBfs(nodeId, db, maxDepth, options);

package/dist/src/mcp-tools/impact.js.map

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package/dist/src/mcp-tools/neighbors.d.ts.map

@@ -1 +1 @@
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