@monoes/monograph 1.2.0 → 1.2.2

package/dist/src/graph/hotspots.js

@@ -1,4 +1,8 @@
 import { execSync } from 'child_process';
+// ── Process-scoped TTL cache for expensive git log calls ─────────────────────
+// Key: `${projectDir}:${windowDays}` → { output, ts }
+const GIT_CACHE_TTL_MS = 5 * 60 * 1000; // 5 minutes
+const gitLogCache = new Map();
 /**
  * Compute hotspot scores for all file nodes in the graph.
  * Combines recency-weighted git churn (half-life 90 days) with
@@ -16,14 +20,22 @@ export function computeHotspots(db, projectDir, options = {}) {
     const minCommits = options.minCommits ?? 2;
     const now = Date.now();
     const HALF_LIFE_DAYS = 90;
-    // ── Step 1: Get git log with dates ────────────────────────────────────────
+    // ── Step 1: Get git log with dates (TTL-cached per projectDir+window) ────
     // Format: ISO-date\tfile-path (one per changed file per commit)
     let gitOutput = '';
-    try {
-        gitOutput = execSync(`git log --since="${windowDays} days ago" --name-only --pretty=format:"%ci" -- .`, { cwd: projectDir, maxBuffer: 10 * 1024 * 1024 }).toString();
+    const cacheKey = `${projectDir}:${windowDays}`;
+    const cached = gitLogCache.get(cacheKey);
+    if (cached && now - cached.ts < GIT_CACHE_TTL_MS) {
+        gitOutput = cached.output;
     }
-    catch {
-        return []; // not a git repo or git not available
+    else {
+        try {
+            gitOutput = execSync(`git log --since="${windowDays} days ago" --name-only --pretty=format:"%ci" -- .`, { cwd: projectDir, maxBuffer: 10 * 1024 * 1024 }).toString();
+            gitLogCache.set(cacheKey, { output: gitOutput, ts: now });
+        }
+        catch {
+            return []; // not a git repo or git not available
+        }
     }
     const churnMap = new Map();
     const halfWindowMs = (windowDays / 2) * 24 * 60 * 60 * 1000;
@@ -119,4 +131,37 @@ export function computeHotspots(db, projectDir, options = {}) {
         .sort((a, b) => b.hotspotScore - a.hotspotScore)
         .slice(0, limit);
 }
+/**
+ * Format hotspot results as structured text with file:line hints for LLM navigation.
+ *
+ * @param hotspots - Results from computeHotspots()
+ * @returns structured text suitable for LLM consumption
+ */
+export function formatHotspots(hotspots) {
+    if (hotspots.length === 0) {
+        return 'hotspots: none found (insufficient git history or no matching file nodes)\n';
+    }
+    const trendMark = (t) => {
+        if (t === 'accelerating')
+            return '+';
+        if (t === 'cooling')
+            return '-';
+        return '~';
+    };
+    const lines = [
+        `hotspots: ${hotspots.length} high-risk files (churn x centrality)`,
+        '',
+    ];
+    hotspots.forEach((h, i) => {
+        lines.push(`[${i + 1}] ${h.nodeName}  trend:${trendMark(h.trend)}`);
+        lines.push(`  file: ${h.filePath}:1`);
+        lines.push(`  score: ${h.hotspotScore.toFixed(2)}  churn: ${h.churnScore.toFixed(2)}  centrality: ${h.centralityScore.toFixed(2)}`);
+        lines.push(`  commits: ${h.rawCommitCount}  last: ${h.lastCommitDate ?? 'unknown'}`);
+        lines.push('');
+    });
+    const accelerating = hotspots.filter(h => h.trend === 'accelerating').length;
+    const cooling = hotspots.filter(h => h.trend === 'cooling').length;
+    lines.push(`summary: ${accelerating} accelerating, ${cooling} cooling, ${hotspots.length - accelerating - cooling} stable`);
+    return lines.join('\n');
+}
 //# sourceMappingURL=hotspots.js.map

package/dist/src/graph/hotspots.js.map

@@ -1 +1 @@
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package/dist/src/graph/import-chain.d.ts

@@ -8,7 +8,9 @@ export interface ImportChainOptions {
 /**
  * Trace all import chains (paths) from `sourceId` to `targetId`.
  *
- * Uses BFS/DFS with cycle detection. Returns all simple paths up to `maxDepth`.
+ * Uses frontier-based BFS with lazy edge loading: only fetches outgoing edges
+ * for nodes as they are visited, avoiding loading the full edge table when
+ * the graph is large.  Returns all simple paths up to `maxDepth`.
  *
  * @param db - The MonographDb instance
  * @param sourceId - Starting node id
@@ -17,4 +19,18 @@ export interface ImportChainOptions {
  * @returns Array of paths; each path is an ordered array of node ids from source to target.
  */
 export declare function traceImportChain(db: MonographDb, sourceId: string, targetId: string, options?: ImportChainOptions): string[][];
+/**
+ * Format import-chain paths as structured text.
+ *
+ * Resolves node IDs to human-readable names (name + file_path) for LLM
+ * context injection.  Each path is printed as an arrow chain with file:line
+ * hints where available.
+ *
+ * @param db - The MonographDb instance (used for name resolution)
+ * @param paths - Result of traceImportChain()
+ * @param sourceId - Source node id (for summary line)
+ * @param targetId - Target node id (for summary line)
+ * @returns Structured text string
+ */
+export declare function formatImportChain(db: MonographDb, paths: string[][], sourceId: string, targetId: string): string;
 //# sourceMappingURL=import-chain.d.ts.map

package/dist/src/graph/import-chain.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"import-chain.d.ts","sourceRoot":"","sources":["../../../src/graph/import-chain.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,WAAW,EAAE,MAAM,kBAAkB,CAAC;AAEpD,MAAM,WAAW,kBAAkB;IACjC,sCAAsC;IACtC,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,2EAA2E;IAC3E,QAAQ,CAAC,EAAE,MAAM,CAAC;CACnB;AAED;;;;;;;;;;;;GAYG;AACH,wBAAgB,gBAAgB,CAC9B,EAAE,EAAE,WAAW,EACf,QAAQ,EAAE,MAAM,EAChB,QAAQ,EAAE,MAAM,EAChB,OAAO,GAAE,kBAAuB,GAC/B,MAAM,EAAE,EAAE,CAmDZ;AAMD;;;;;;;;;;;;GAYG;AACH,wBAAgB,iBAAiB,CAC/B,EAAE,EAAE,WAAW,EACf,KAAK,EAAE,MAAM,EAAE,EAAE,EACjB,QAAQ,EAAE,MAAM,EAChB,QAAQ,EAAE,MAAM,GACf,MAAM,CA6CR"}

package/dist/src/graph/import-chain.js

@@ -1,7 +1,9 @@
 /**
  * Trace all import chains (paths) from `sourceId` to `targetId`.
  *
- * Uses BFS/DFS with cycle detection. Returns all simple paths up to `maxDepth`.
+ * Uses frontier-based BFS with lazy edge loading: only fetches outgoing edges
+ * for nodes as they are visited, avoiding loading the full edge table when
+ * the graph is large.  Returns all simple paths up to `maxDepth`.
  *
  * @param db - The MonographDb instance
  * @param sourceId - Starting node id
@@ -11,27 +13,24 @@
  */
 export function traceImportChain(db, sourceId, targetId, options = {}) {
     const { maxDepth = 10, maxPaths = 100 } = options;
-    const nodeRows = db.prepare('SELECT id FROM nodes').all();
-    if (nodeRows.length === 0)
-        return [];
-    const nodeSet = new Set(nodeRows.map(r => r.id));
-    if (!nodeSet.has(sourceId) || !nodeSet.has(targetId))
+    // Quick existence check — avoids loading any edge data for invalid IDs
+    const exists = db.prepare('SELECT 1 FROM nodes WHERE id = ? LIMIT 1');
+    if (!exists.get(sourceId) || !exists.get(targetId))
         return [];
     if (sourceId === targetId)
         return [[sourceId]];
-    const edgeRows = db.prepare('SELECT source_id, target_id FROM edges').all();
-    // Build adjacency
-    const adj = new Map();
-    for (const n of nodeSet)
-        adj.set(n, []);
-    for (const { source_id: src, target_id: tgt } of edgeRows) {
-        if (src === tgt)
-            continue;
-        if (!adj.has(src) || !adj.has(tgt))
-            continue;
-        adj.get(src).push(tgt);
+    // Lazy adjacency cache: only loaded for nodes we actually visit
+    const adjCache = new Map();
+    const edgeStmt = db.prepare('SELECT target_id FROM edges WHERE source_id = ? AND source_id != target_id');
+    function getNeighbors(nodeId) {
+        let neighbors = adjCache.get(nodeId);
+        if (neighbors === undefined) {
+            neighbors = edgeStmt.all(nodeId).map(r => r.target_id);
+            adjCache.set(nodeId, neighbors);
+        }
+        return neighbors;
     }
-    // DFS with path tracking
+    // DFS with path tracking (iterative to avoid stack overflow on deep graphs)
     const results = [];
     const stack = [
         { node: sourceId, path: [sourceId], visited: new Set([sourceId]) },
@@ -42,7 +41,7 @@ export function traceImportChain(db, sourceId, targetId, options = {}) {
         // the target would require one more edge which would exceed maxDepth.
         if (path.length - 1 >= maxDepth)
             continue;
-        for (const neighbor of adj.get(node) ?? []) {
+        for (const neighbor of getNeighbors(node)) {
             if (visited.has(neighbor))
                 continue;
             if (neighbor === targetId) {
@@ -61,4 +60,54 @@ export function traceImportChain(db, sourceId, targetId, options = {}) {
     }
     return results;
 }
+// ---------------------------------------------------------------------------
+// Structured text formatter for LLM consumption
+// ---------------------------------------------------------------------------
+/**
+ * Format import-chain paths as structured text.
+ *
+ * Resolves node IDs to human-readable names (name + file_path) for LLM
+ * context injection.  Each path is printed as an arrow chain with file:line
+ * hints where available.
+ *
+ * @param db - The MonographDb instance (used for name resolution)
+ * @param paths - Result of traceImportChain()
+ * @param sourceId - Source node id (for summary line)
+ * @param targetId - Target node id (for summary line)
+ * @returns Structured text string
+ */
+export function formatImportChain(db, paths, sourceId, targetId) {
+    if (paths.length === 0) {
+        return `Import chain: no path found from ${sourceId} to ${targetId}.`;
+    }
+    // Batch-resolve all node IDs in the result set
+    const allIds = [...new Set(paths.flat())];
+    const placeholders = allIds.map(() => '?').join(',');
+    const nodeRows = db
+        .prepare(`SELECT id, name, file_path, start_line FROM nodes WHERE id IN (${placeholders})`)
+        .all(...allIds);
+    const nodeInfo = new Map();
+    for (const row of nodeRows) {
+        const loc = row.file_path != null
+            ? row.start_line != null
+                ? `${row.file_path}:${row.start_line}`
+                : row.file_path
+            : row.id;
+        nodeInfo.set(row.id, { name: row.name ?? row.id, loc });
+    }
+    const lines = [
+        `Import chain: ${paths.length} path${paths.length === 1 ? '' : 's'} from ${nodeInfo.get(sourceId)?.name ?? sourceId} to ${nodeInfo.get(targetId)?.name ?? targetId}`,
+        '',
+    ];
+    for (let i = 0; i < paths.length; i++) {
+        lines.push(`Path ${i + 1} (${paths[i].length} node${paths[i].length === 1 ? '' : 's'}):`);
+        for (const id of paths[i]) {
+            const info = nodeInfo.get(id);
+            lines.push(`  ${info?.name ?? id} — ${info?.loc ?? id}`);
+        }
+        if (i < paths.length - 1)
+            lines.push('');
+    }
+    return lines.join('\n');
+}
 //# sourceMappingURL=import-chain.js.map

package/dist/src/graph/import-chain.js.map

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+{"version":3,"file":"import-chain.js","sourceRoot":"","sources":["../../../src/graph/import-chain.ts"],"names":[],"mappings":"AASA;;;;;;;;;;;;GAYG;AACH,MAAM,UAAU,gBAAgB,CAC9B,EAAe,EACf,QAAgB,EAChB,QAAgB,EAChB,UAA8B,EAAE;IAEhC,MAAM,EAAE,QAAQ,GAAG,EAAE,EAAE,QAAQ,GAAG,GAAG,EAAE,GAAG,OAAO,CAAC;IAElD,uEAAuE;IACvE,MAAM,MAAM,GAAG,EAAE,CAAC,OAAO,CAAC,0CAA0C,CAAC,CAAC;IACtE,IAAI,CAAC,MAAM,CAAC,GAAG,CAAC,QAAQ,CAAC,IAAI,CAAC,MAAM,CAAC,GAAG,CAAC,QAAQ,CAAC;QAAE,OAAO,EAAE,CAAC;IAC9D,IAAI,QAAQ,KAAK,QAAQ;QAAE,OAAO,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC;IAE/C,gEAAgE;IAChE,MAAM,QAAQ,GAAG,IAAI,GAAG,EAAoB,CAAC;IAC7C,MAAM,QAAQ,GAAG,EAAE,CAAC,OAAO,CACzB,4EAA4E,CAC7E,CAAC;IAEF,SAAS,YAAY,CAAC,MAAc;QAClC,IAAI,SAAS,GAAG,QAAQ,CAAC,GAAG,CAAC,MAAM,CAAC,CAAC;QACrC,IAAI,SAAS,KAAK,SAAS,EAAE,CAAC;YAC5B,SAAS,GAAI,QAAQ,CAAC,GAAG,CAAC,MAAM,CAA6B,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC;YACpF,QAAQ,CAAC,GAAG,CAAC,MAAM,EAAE,SAAS,CAAC,CAAC;QAClC,CAAC;QACD,OAAO,SAAS,CAAC;IACnB,CAAC;IAED,4EAA4E;IAC5E,MAAM,OAAO,GAAe,EAAE,CAAC;IAC/B,MAAM,KAAK,GAAkE;QAC3E,EAAE,IAAI,EAAE,QAAQ,EAAE,IAAI,EAAE,CAAC,QAAQ,CAAC,EAAE,OAAO,EAAE,IAAI,GAAG,CAAC,CAAC,QAAQ,CAAC,CAAC,EAAE;KACnE,CAAC;IAEF,OAAO,KAAK,CAAC,MAAM,GAAG,CAAC,IAAI,OAAO,CAAC,MAAM,GAAG,QAAQ,EAAE,CAAC;QACrD,MAAM,EAAE,IAAI,EAAE,IAAI,EAAE,OAAO,EAAE,GAAG,KAAK,CAAC,GAAG,EAAG,CAAC;QAC7C,iFAAiF;QACjF,sEAAsE;QACtE,IAAI,IAAI,CAAC,MAAM,GAAG,CAAC,IAAI,QAAQ;YAAE,SAAS;QAE1C,KAAK,MAAM,QAAQ,IAAI,YAAY,CAAC,IAAI,CAAC,EAAE,CAAC;YAC1C,IAAI,OAAO,CAAC,GAAG,CAAC,QAAQ,CAAC;gBAAE,SAAS;YACpC,IAAI,QAAQ,KAAK,QAAQ,EAAE,CAAC;gBAC1B,OAAO,CAAC,IAAI,CAAC,CAAC,GAAG,IAAI,EAAE,QAAQ,CAAC,CAAC,CAAC;gBAClC,IAAI,OAAO,CAAC,MAAM,IAAI,QAAQ;oBAAE,MAAM;YACxC,CAAC;iBAAM,CAAC;gBACN,KAAK,CAAC,IAAI,CAAC;oBACT,IAAI,EAAE,QAAQ;oBACd,IAAI,EAAE,CAAC,GAAG,IAAI,EAAE,QAAQ,CAAC;oBACzB,OAAO,EAAE,IAAI,GAAG,CAAC,CAAC,GAAG,OAAO,EAAE,QAAQ,CAAC,CAAC;iBACzC,CAAC,CAAC;YACL,CAAC;QACH,CAAC;IACH,CAAC;IAED,OAAO,OAAO,CAAC;AACjB,CAAC;AAED,8EAA8E;AAC9E,gDAAgD;AAChD,8EAA8E;AAE9E;;;;;;;;;;;;GAYG;AACH,MAAM,UAAU,iBAAiB,CAC/B,EAAe,EACf,KAAiB,EACjB,QAAgB,EAChB,QAAgB;IAEhB,IAAI,KAAK,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;QACvB,OAAO,oCAAoC,QAAQ,OAAO,QAAQ,GAAG,CAAC;IACxE,CAAC;IAED,+CAA+C;IAC/C,MAAM,MAAM,GAAG,CAAC,GAAG,IAAI,GAAG,CAAC,KAAK,CAAC,IAAI,EAAE,CAAC,CAAC,CAAC;IAC1C,MAAM,YAAY,GAAG,MAAM,CAAC,GAAG,CAAC,GAAG,EAAE,CAAC,GAAG,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;IACrD,MAAM,QAAQ,GAAG,EAAE;SAChB,OAAO,CACN,kEAAkE,YAAY,GAAG,CAClF;SACA,GAAG,CAAC,GAAG,MAAM,CAKb,CAAC;IAEJ,MAAM,QAAQ,GAAG,IAAI,GAAG,EAAyC,CAAC;IAClE,KAAK,MAAM,GAAG,IAAI,QAAQ,EAAE,CAAC;QAC3B,MAAM,GAAG,GACP,GAAG,CAAC,SAAS,IAAI,IAAI;YACnB,CAAC,CAAC,GAAG,CAAC,UAAU,IAAI,IAAI;gBACtB,CAAC,CAAC,GAAG,GAAG,CAAC,SAAS,IAAI,GAAG,CAAC,UAAU,EAAE;gBACtC,CAAC,CAAC,GAAG,CAAC,SAAS;YACjB,CAAC,CAAC,GAAG,CAAC,EAAE,CAAC;QACb,QAAQ,CAAC,GAAG,CAAC,GAAG,CAAC,EAAE,EAAE,EAAE,IAAI,EAAE,GAAG,CAAC,IAAI,IAAI,GAAG,CAAC,EAAE,EAAE,GAAG,EAAE,CAAC,CAAC;IAC1D,CAAC;IAED,MAAM,KAAK,GAAa;QACtB,iBAAiB,KAAK,CAAC,MAAM,QAAQ,KAAK,CAAC,MAAM,KAAK,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,GAAG,SAAS,QAAQ,CAAC,GAAG,CAAC,QAAQ,CAAC,EAAE,IAAI,IAAI,QAAQ,OAAO,QAAQ,CAAC,GAAG,CAAC,QAAQ,CAAC,EAAE,IAAI,IAAI,QAAQ,EAAE;QACpK,EAAE;KACH,CAAC;IAEF,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,KAAK,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE,CAAC;QACtC,KAAK,CAAC,IAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,KAAK,KAAK,CAAC,CAAC,CAAC,CAAC,MAAM,QAAQ,KAAK,CAAC,CAAC,CAAC,CAAC,MAAM,KAAK,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,GAAG,IAAI,CAAC,CAAC;QAC1F,KAAK,MAAM,EAAE,IAAI,KAAK,CAAC,CAAC,CAAC,EAAE,CAAC;YAC1B,MAAM,IAAI,GAAG,QAAQ,CAAC,GAAG,CAAC,EAAE,CAAC,CAAC;YAC9B,KAAK,CAAC,IAAI,CAAC,KAAK,IAAI,EAAE,IAAI,IAAI,EAAE,MAAM,IAAI,EAAE,GAAG,IAAI,EAAE,EAAE,CAAC,CAAC;QAC3D,CAAC;QACD,IAAI,CAAC,GAAG,KAAK,CAAC,MAAM,GAAG,CAAC;YAAE,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAC3C,CAAC;IAED,OAAO,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;AAC1B,CAAC"}

package/dist/src/graph/loader.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"loader.d.ts","sourceRoot":"","sources":["../../../src/graph/loader.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,YAAY,CAAC;AAC/B,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,aAAa,CAAC;AAEjD,wBAAgB,kBAAkB,CAAC,KAAK,EAAE,aAAa,EAAE,GAAG,KAAK,CAahE;AAED,wBAAgB,eAAe,CAAC,EAAE,EAAE,OAAO,kBAAkB,EAAE,WAAW,GAAG,KAAK,CAsBjF"}
+{"version":3,"file":"loader.d.ts","sourceRoot":"","sources":["../../../src/graph/loader.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,YAAY,CAAC;AAC/B,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,aAAa,CAAC;AAEjD,wBAAgB,kBAAkB,CAAC,KAAK,EAAE,aAAa,EAAE,GAAG,KAAK,CAahE;AAED,wBAAgB,eAAe,CAAC,EAAE,EAAE,OAAO,kBAAkB,EAAE,WAAW,GAAG,KAAK,CAyBjF"}

package/dist/src/graph/loader.js

@@ -18,24 +18,23 @@ export function loadGraphFromEdges(edges) {
 }
 export function loadGraphFromDb(db) {
     const nodes = db.prepare('SELECT id FROM nodes').all();
-    const edges = db.prepare('SELECT * FROM edges').all();
+    // Explicitly select only the columns used here — avoids fetching reason/evidence blobs
+    const edges = db.prepare('SELECT id, source_id, target_id, relation, confidence, confidence_score FROM edges').all();
     const graph = new Graph({ multi: true, type: 'directed' });
-    for (const n of nodes) {
-        if (!graph.hasNode(n.id))
-            graph.addNode(n.id);
-    }
+    // Seed known nodes first; edges below may reference node ids not in the nodes table
+    // (defensive: addNode is a no-op guard here, has-check avoided to reduce overhead)
+    for (const n of nodes)
+        graph.mergeNode(n.id);
     for (const e of edges) {
-        if (!graph.hasNode(e.source_id))
-            graph.addNode(e.source_id);
-        if (!graph.hasNode(e.target_id))
-            graph.addNode(e.target_id);
+        graph.mergeNode(e.source_id);
+        graph.mergeNode(e.target_id);
         try {
             graph.addEdge(e.source_id, e.target_id, {
                 id: e.id, relation: e.relation,
                 confidence: e.confidence, confidenceScore: e.confidence_score,
             });
         }
-        catch { /* skip */ }
+        catch { /* skip duplicate edges */ }
     }
     return graph;
 }

package/dist/src/graph/loader.js.map

@@ -1 +1 @@
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package/dist/src/graph/maintainability.d.ts

@@ -15,4 +15,12 @@ export interface MaintainabilityReport {
     criticalCount: number;
 }
 export declare function computeMaintainabilityIndex(db: MonographDb): MaintainabilityReport;
+/**
+ * Format a MaintainabilityReport as structured text with file:line hints for LLM navigation.
+ *
+ * @param report - MaintainabilityReport from computeMaintainabilityIndex()
+ * @param topN - number of worst files to list (default 10)
+ * @returns structured text suitable for LLM consumption
+ */
+export declare function formatMaintainability(report: MaintainabilityReport, topN?: number): string;
 //# sourceMappingURL=maintainability.d.ts.map

package/dist/src/graph/maintainability.d.ts.map

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package/dist/src/graph/maintainability.js

@@ -21,22 +21,32 @@ export function computeMaintainabilityIndex(db) {
     if (nodes.length === 0) {
         return { results: [], averageMi: 100, lowMiCount: 0, criticalCount: 0 };
     }
+    // ── Batch degree lookup: one query replaces 2×N individual queries ────────
+    // Combine in-degree and out-degree via UNION ALL + GROUP BY in a single pass.
+    const degreeMap = new Map();
+    for (const { node_id, deg } of db.prepare(`
+    SELECT node_id, SUM(cnt) as deg FROM (
+      SELECT target_id AS node_id, COUNT(*) AS cnt FROM edges GROUP BY target_id
+      UNION ALL
+      SELECT source_id AS node_id, COUNT(*) AS cnt FROM edges GROUP BY source_id
+    ) GROUP BY node_id
+  `).all()) {
+        degreeMap.set(node_id, deg);
+    }
     const results = [];
+    const propUpdates = [];
     for (const node of nodes) {
         const loc = Math.max(1, node.end_line - node.start_line + 1);
-        // Count in/out degree from edges table
-        const inDegreeRow = db.prepare('SELECT COUNT(*) as c FROM edges WHERE target_id = ?').get(node.id);
-        const outDegreeRow = db.prepare('SELECT COUNT(*) as c FROM edges WHERE source_id = ?').get(node.id);
-        const degree = inDegreeRow.c + outDegreeRow.c;
+        const degree = degreeMap.get(node.id) ?? 0;
         const hvProxy = degree * Math.log2(Math.max(degree, 2));
         // Maintainability Index formula
         const rawMi = 171 - 5.2 * Math.log(hvProxy + 1) - 0.23 * (loc / 10) - 16.2 * Math.log(Math.max(1, loc));
         const mi = Math.max(0, Math.min(100, rawMi));
         const grade = gradeFromMi(mi);
-        // Store maintainabilityIndex back on the node's properties
+        // Stage property update — batched below
         const props = node.properties ? JSON.parse(node.properties) : {};
         props.maintainabilityIndex = mi;
-        db.prepare('UPDATE nodes SET properties = ? WHERE id = ?').run(JSON.stringify(props), node.id);
+        propUpdates.push({ id: node.id, props: JSON.stringify(props) });
         results.push({
             nodeId: node.id,
             name: node.name,
@@ -47,18 +57,63 @@ export function computeMaintainabilityIndex(db) {
             linesOfCode: loc,
         });
     }
+    // ── Batch UPDATE all property writes in one transaction ───────────────────
+    const updateStmt = db.prepare('UPDATE nodes SET properties = ? WHERE id = ?');
+    db.transaction((updates) => {
+        for (const { id, props } of updates)
+            updateStmt.run(props, id);
+    })(propUpdates);
     // Sort by MI ascending (worst first)
     results.sort((a, b) => a.mi - b.mi);
     const averageMi = results.length > 0
         ? results.reduce((sum, r) => sum + r.mi, 0) / results.length
         : 100;
-    const lowMiCount = results.filter(r => r.mi < 65).length;
-    const criticalCount = results.filter(r => r.mi < 25).length;
     return {
         results,
         averageMi: Math.round(averageMi * 100) / 100,
-        lowMiCount,
-        criticalCount,
+        lowMiCount: results.filter(r => r.mi < 65).length,
+        criticalCount: results.filter(r => r.mi < 25).length,
     };
 }
+/**
+ * Format a MaintainabilityReport as structured text with file:line hints for LLM navigation.
+ *
+ * @param report - MaintainabilityReport from computeMaintainabilityIndex()
+ * @param topN - number of worst files to list (default 10)
+ * @returns structured text suitable for LLM consumption
+ */
+export function formatMaintainability(report, topN = 10) {
+    const { results, averageMi, lowMiCount, criticalCount } = report;
+    if (results.length === 0) {
+        return 'maintainability: no Function/Method/Symbol nodes with line info found\n';
+    }
+    const lines = [
+        `maintainability: ${results.length} nodes analysed`,
+        `  avg_mi: ${averageMi}  low(mi<65): ${lowMiCount}  critical(mi<25): ${criticalCount}`,
+        '',
+    ];
+    // results already sorted by MI ascending (worst first)
+    const worst = results.slice(0, topN);
+    if (worst.length > 0) {
+        lines.push(`top_${topN}_worst_mi:`);
+        for (const r of worst) {
+            const loc = r.filePath ? `${r.filePath}:1` : `<unknown>:1`;
+            lines.push(`  - ${r.name}  grade:${r.grade}  mi:${r.mi}`);
+            lines.push(`    file: ${loc}`);
+            lines.push(`    loc: ${r.linesOfCode}  halstead_vol: ${r.halsteadVolume}`);
+        }
+        lines.push('');
+    }
+    const critical = results.filter(r => r.mi < 25);
+    if (critical.length > 0) {
+        lines.push(`critical_nodes(mi<25): ${critical.length}`);
+        for (const r of critical.slice(0, 5)) {
+            const loc = r.filePath ? `${r.filePath}:1` : `<unknown>:1`;
+            lines.push(`  - ${r.name}  file: ${loc}  mi:${r.mi}  grade:${r.grade}`);
+        }
+        if (critical.length > 5)
+            lines.push(`  ... and ${critical.length - 5} more`);
+    }
+    return lines.join('\n');
+}
 //# sourceMappingURL=maintainability.js.map

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package/dist/src/graph/mirrored-dirs.d.ts

@@ -25,4 +25,8 @@ export interface MirroredDirResult {
     remaining: CloneFamily[];
 }
 export declare function detectMirroredFamilies(families: CloneFamily[], root: string): MirroredDirResult;
+/**
+ * Format a MirroredDirsReport as structured text for LLM consumption.
+ */
+export declare function formatMirroredDirs(report: MirroredDirsReport): string;
 //# sourceMappingURL=mirrored-dirs.d.ts.map

package/dist/src/graph/mirrored-dirs.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"mirrored-dirs.d.ts","sourceRoot":"","sources":["../../../src/graph/mirrored-dirs.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,WAAW,EAAE,MAAM,kBAAkB,CAAC;AACpD,OAAO,KAAK,EAAE,WAAW,EAAE,MAAM,4BAA4B,CAAC;AAE9D,MAAM,WAAW,eAAe;IAC9B,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,MAAM,CAAC;IACb,UAAU,EAAE,MAAM,CAAC;IACnB,eAAe,EAAE,MAAM,EAAE,CAAC;IAC1B,SAAS,EAAE,MAAM,CAAC;IAClB,SAAS,EAAE,MAAM,CAAC;CACnB;AAED,MAAM,WAAW,kBAAkB;IACjC,KAAK,EAAE,eAAe,EAAE,CAAC;IACzB,iBAAiB,EAAE,MAAM,CAAC;CAC3B;AAED;;;;;;GAMG;AACH,wBAAgB,kBAAkB,CAAC,EAAE,EAAE,WAAW,EAAE,aAAa,SAAM,GAAG,kBAAkB,CAmE3F;AAED,MAAM,WAAW,iBAAiB;IAChC,QAAQ,EAAE,eAAe,EAAE,CAAC;IAC5B,SAAS,EAAE,WAAW,EAAE,CAAC;CAC1B;AAED,wBAAgB,sBAAsB,CACpC,QAAQ,EAAE,WAAW,EAAE,EACvB,IAAI,EAAE,MAAM,GACX,iBAAiB,CAiFnB;AAED;;GAEG;AACH,wBAAgB,kBAAkB,CAAC,MAAM,EAAE,kBAAkB,GAAG,MAAM,CAcrE"}

package/dist/src/graph/mirrored-dirs.js

@@ -90,16 +90,35 @@ export function detectMirroredFamilies(families, root) {
                 continue;
             const fa = families[i];
             const fb = families[j];
-            const dirsA = new Set(fa.files.map(dirOf));
-            const dirsB = new Set(fb.files.map(dirOf));
-            if (dirsA.size !== 1 || dirsB.size !== 1)
-                continue;
-            const [dirA] = dirsA;
-            const [dirB] = dirsB;
-            if (dirA === dirB)
+            // Single pass: extract dir and basename together to avoid two separate .map() iterations
+            let firstDirA;
+            let singleDirA = true;
+            let firstDirB;
+            let singleDirB = true;
+            const namesA = new Set();
+            const namesB = new Set();
+            for (const f of fa.files) {
+                const d = dirOf(f);
+                if (firstDirA === undefined)
+                    firstDirA = d;
+                else if (d !== firstDirA) {
+                    singleDirA = false;
+                }
+                namesA.add(baseName(f));
+            }
+            for (const f of fb.files) {
+                const d = dirOf(f);
+                if (firstDirB === undefined)
+                    firstDirB = d;
+                else if (d !== firstDirB) {
+                    singleDirB = false;
+                }
+                namesB.add(baseName(f));
+            }
+            if (!singleDirA || !singleDirB)
                 continue;
-            const namesA = new Set(fa.files.map(baseName));
-            const namesB = new Set(fb.files.map(baseName));
+            const dirA = firstDirA;
+            const dirB = firstDirB;
             const shared = [];
             for (const n of namesA) {
                 if (namesB.has(n))
@@ -124,9 +143,25 @@ export function detectMirroredFamilies(families, root) {
         }
     }
     mirrored.sort((a, b) => b.similarity - a.similarity);
-    return {
-        mirrored,
-        remaining: [...remainingIndices].map(i => families[i]),
-    };
+    const remaining = [];
+    for (const i of remainingIndices)
+        remaining.push(families[i]);
+    return { mirrored, remaining };
+}
+/**
+ * Format a MirroredDirsReport as structured text for LLM consumption.
+ */
+export function formatMirroredDirs(report) {
+    if (report.pairs.length === 0) {
+        return `No mirrored directories found (${report.totalDirsAnalyzed} dirs analyzed).`;
+    }
+    const lines = [
+        `Mirrored directories: ${report.pairs.length} pair(s) of ${report.totalDirsAnalyzed} analyzed`,
+        '',
+    ];
+    for (const p of report.pairs) {
+        lines.push(`  ${p.dirA} <-> ${p.dirB}  similarity=${(p.similarity * 100).toFixed(0)}%  shared=${p.sharedFileNames.length}  uniqueA=${p.uniqueToA}  uniqueB=${p.uniqueToB}`);
+    }
+    return lines.join('\n');
 }
 //# sourceMappingURL=mirrored-dirs.js.map

package/dist/src/graph/mirrored-dirs.js.map

@@ -1 +1 @@
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package/dist/src/graph/narrowing.d.ts

@@ -6,4 +6,19 @@ export declare function isUnusedImportBinding(importedName: string, accessedMemb
 export declare function extractAccessedMembers(usages: string[]): AccessedMembers;
 export declare function markAllExportsReferenced(exports: string[]): Set<string>;
 export declare function markMemberExportsReferenced(exports: string[], accessed: AccessedMembers): Set<string>;
+export interface NarrowingReport {
+    filePath: string;
+    totalExports: number;
+    referencedExports: string[];
+    unusedExports: string[];
+}
+/**
+ * Given a file's exports and the accessed members from all import sites,
+ * return a report of which exports are unused.
+ */
+export declare function filterUnusedExports(filePath: string, exports: string[], accessed: AccessedMembers): NarrowingReport;
+/**
+ * Format narrowing reports as structured text for LLM dead-import diagnostics.
+ */
+export declare function formatNarrowingReport(reports: NarrowingReport[]): string;
 //# sourceMappingURL=narrowing.d.ts.map