@monoes/monograph 1.2.0 → 1.2.2

package/dist/src/search/hybrid-query.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"hybrid-query.d.ts","sourceRoot":"","sources":["../../../src/search/hybrid-query.ts"],"names":[],"mappings":"AAAA;;;;;;;;;GASG;AAEH,OAAO,KAAK,QAAQ,MAAM,gBAAgB,CAAC;AAC3C,OAAO,KAAK,EAAE,UAAU,EAAE,MAAM,eAAe,CAAC;AAChD,OAAO,EAAc,KAAK,YAAY,EAAE,MAAM,UAAU,CAAC;AAMzD,MAAM,WAAW,kBAAkB;IACjC,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,mEAAmE;IACnE,QAAQ,CAAC,EAAE,UAAU,CAAC;CACvB;AAED,MAAM,WAAW,YAAa,SAAQ,YAAY;IAChD,EAAE,EAAE,MAAM,CAAC;IACX,IAAI,EAAE,MAAM,CAAC;IACb,SAAS,EAAE,MAAM,CAAC;IAClB,QAAQ,EAAE,MAAM,GAAG,IAAI,CAAC;IACxB,KAAK,EAAE,MAAM,CAAC;IACd,KAAK,EAAE,MAAM,CAAC;CACf;AAED;;;;;;;GAOG;AACH,wBAAsB,WAAW,CAC/B,EAAE,EAAE,QAAQ,CAAC,QAAQ,EACrB,KAAK,EAAE,MAAM,EACb,OAAO,GAAE,kBAAuB,GAC/B,OAAO,CAAC,YAAY,EAAE,CAAC,CAqGzB"}
+{"version":3,"file":"hybrid-query.d.ts","sourceRoot":"","sources":["../../../src/search/hybrid-query.ts"],"names":[],"mappings":"AAAA;;;;;;;;;GASG;AAEH,OAAO,KAAK,QAAQ,MAAM,gBAAgB,CAAC;AAC3C,OAAO,KAAK,EAAE,UAAU,EAAE,MAAM,eAAe,CAAC;AAChD,OAAO,EAAc,KAAK,YAAY,EAAE,MAAM,UAAU,CAAC;AAMzD,MAAM,WAAW,kBAAkB;IACjC,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,mEAAmE;IACnE,QAAQ,CAAC,EAAE,UAAU,CAAC;CACvB;AAED,MAAM,WAAW,YAAa,SAAQ,YAAY;IAChD,EAAE,EAAE,MAAM,CAAC;IACX,IAAI,EAAE,MAAM,CAAC;IACb,SAAS,EAAE,MAAM,CAAC;IAClB,QAAQ,EAAE,MAAM,GAAG,IAAI,CAAC;IACxB,KAAK,EAAE,MAAM,CAAC;IACd,KAAK,EAAE,MAAM,CAAC;IACd,8EAA8E;IAC9E,SAAS,CAAC,EAAE,MAAM,GAAG,IAAI,CAAC;IAC1B,6EAA6E;IAC7E,OAAO,CAAC,EAAE,MAAM,GAAG,IAAI,CAAC;CACzB;AAED;;;;;;;GAOG;AACH,wBAAsB,WAAW,CAC/B,EAAE,EAAE,QAAQ,CAAC,QAAQ,EACrB,KAAK,EAAE,MAAM,EACb,OAAO,GAAE,kBAAuB,GAC/B,OAAO,CAAC,YAAY,EAAE,CAAC,CA2GzB"}

package/dist/src/search/hybrid-query.js

@@ -35,6 +35,8 @@ export async function hybridQuery(db, query, options = {}) {
         filePath: r.filePath,
         label: r.label,
         score: r.rank,
+        startLine: r.startLine,
+        endLine: r.endLine,
     }));
     // ── Decide whether to add vector results ──────────────────────────────────
     const embeddingsEnabled = embedder !== undefined || process.env['MONOGRAPH_EMBEDDINGS'] === 'true';
@@ -85,7 +87,7 @@ export async function hybridQuery(db, query, options = {}) {
     if (unknownIds.length > 0) {
         const placeholders = unknownIds.map(() => '?').join(',');
         const rows = db
-            .prepare(`SELECT id, name, norm_label, file_path, label FROM nodes WHERE id IN (${placeholders})`)
+            .prepare(`SELECT id, name, norm_label, file_path, label, start_line, end_line FROM nodes WHERE id IN (${placeholders})`)
             .all(...unknownIds);
         const rowMap = new Map(rows.map((r) => [r.id, r]));
         for (const item of enrichable) {
@@ -96,6 +98,8 @@ export async function hybridQuery(db, query, options = {}) {
                     item.normLabel = row.norm_label;
                     item.filePath = row.file_path;
                     item.label = row.label;
+                    item.startLine = row.start_line;
+                    item.endLine = row.end_line;
                 }
             }
         }

package/dist/src/search/hybrid-query.js.map

@@ -1 +1 @@
-{"version":3,"file":"hybrid-query.js","sourceRoot":"","sources":["../../../src/search/hybrid-query.ts"],"names":[],"mappings":"AAAA;;;;;;;;;GASG;AAIH,OAAO,EAAE,UAAU,EAAqB,MAAM,UAAU,CAAC;AACzD,OAAO,EAAE,gBAAgB,EAAE,eAAe,EAAE,MAAM,+BAA+B,CAAC;AAClF,OAAO,EAAE,SAAS,EAAE,MAAM,eAAe,CAAC;AAC1C,OAAO,EAAE,SAAS,EAAE,MAAM,yBAAyB,CAAC;AACpD,OAAO,EAAE,mBAAmB,EAAE,MAAM,gBAAgB,CAAC;AAkBrD;;;;;;;GAOG;AACH,MAAM,CAAC,KAAK,UAAU,WAAW,CAC/B,EAAqB,EACrB,KAAa,EACb,UAA8B,EAAE;IAEhC,MAAM,EAAE,KAAK,GAAG,EAAE,EAAE,KAAK,EAAE,QAAQ,EAAE,GAAG,OAAO,CAAC;IAEhD,iFAAiF;IACjF,MAAM,eAAe,GAAG,mBAAmB,CAAC,KAAK,CAAC,CAAC;IAEnD,8EAA8E;IAC9E,MAAM,SAAS,GAAG,EAAE,CAAC;IACrB,MAAM,OAAO,GAAG,SAAS,CAAC,EAAE,EAAE,eAAe,EAAE,SAAS,EAAE,KAAK,CAAC,CAAC;IACjE,MAAM,WAAW,GAAmB,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC;QACtD,EAAE,EAAE,CAAC,CAAC,EAAE;QACR,IAAI,EAAE,CAAC,CAAC,IAAI;QACZ,SAAS,EAAE,CAAC,CAAC,SAAS;QACtB,QAAQ,EAAE,CAAC,CAAC,QAAQ;QACpB,KAAK,EAAE,CAAC,CAAC,KAAK;QACd,KAAK,EAAE,CAAC,CAAC,IAAI;KACd,CAAC,CAAC,CAAC;IAEJ,6EAA6E;IAC7E,MAAM,iBAAiB,GACrB,QAAQ,KAAK,SAAS,IAAI,OAAO,CAAC,GAAG,CAAC,sBAAsB,CAAC,KAAK,MAAM,CAAC;IAE3E,IAAI,CAAC,iBAAiB;QAAE,OAAO,WAAW,CAAC,WAAW,EAAE,KAAK,CAAC,CAAC;IAE/D,MAAM,cAAc,GAAG,eAAe,CAAC,EAAE,CAAC,CAAC;IAC3C,IAAI,cAAc,KAAK,CAAC;QAAE,OAAO,WAAW,CAAC,WAAW,EAAE,KAAK,CAAC,CAAC;IAEjE,8EAA8E;IAC9E,IAAI,QAAsB,CAAC;IAC3B,IAAI,CAAC;QACH,MAAM,EAAE,GAAuC,QAAQ,IAAI,CAAC,MAAM,MAAM,CAAC,eAAe,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,WAAW,EAAE,CAAC,CAAC,CAAC;QACxH,QAAQ,GAAG,MAAM,SAAS,CAAC,eAAe,EAAE,EAAE,CAAC,CAAC;IAClD,CAAC;IAAC,MAAM,CAAC;QACP,gDAAgD;QAChD,OAAO,WAAW,CAAC,WAAW,EAAE,KAAK,CAAC,CAAC;IACzC,CAAC;IAED,6EAA6E;IAC7E,MAAM,OAAO,GAAG,gBAAgB,CAAC,EAAE,CAAC,CAAC;IACrC,MAAM,YAAY,GAAqC,EAAE,CAAC;IAE1D,KAAK,MAAM,CAAC,MAAM,EAAE,GAAG,CAAC,IAAI,OAAO,EAAE,CAAC;QACpC,MAAM,GAAG,GAAG,UAAU,CAAC,QAAQ,EAAE,GAAG,CAAC,CAAC,CAAC,0CAA0C;QACjF,YAAY,CAAC,IAAI,CAAC,EAAE,EAAE,EAAE,MAAM,EAAE,MAAM,EAAE,GAAG,EAAE,CAAC,CAAC;IACjD,CAAC;IAED,uCAAuC;IACvC,YAAY,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,MAAM,GAAG,CAAC,CAAC,MAAM,CAAC,CAAC;IAEjD,2EAA2E;IAC3E,MAAM,QAAQ,GAAG,IAAI,GAAG,CAAC,WAAW,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC;IAC5D,MAAM,aAAa,GAAmB,YAAY,CAAC,GAAG,CAAC,CAAC,EAAE,EAAE,EAAE;QAC5D,MAAM,IAAI,GAAG,QAAQ,CAAC,GAAG,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC;QACjC,OAAO;YACL,EAAE,EAAE,EAAE,CAAC,EAAE;YACT,IAAI,EAAG,IAAI,EAAE,IAA2B,IAAI,EAAE;YAC9C,SAAS,EAAG,IAAI,EAAE,SAAgC,IAAI,EAAE;YACxD,QAAQ,EAAG,IAAI,EAAE,QAAsC,IAAI,IAAI;YAC/D,KAAK,EAAG,IAAI,EAAE,KAA4B,IAAI,EAAE;YAChD,KAAK,EAAE,EAAE,CAAC,MAAM;SACjB,CAAC;IACJ,CAAC,CAAC,CAAC;IAEH,8EAA8E;IAC9E,MAAM,MAAM,GAAG,UAAU,CAAC,WAAW,EAAE,aAAa,CAAC,CAAC;IAEtD,kDAAkD;IAClD,MAAM,UAAU,GAAG,MAAiC,CAAC;IACrD,MAAM,UAAU,GAAG,UAAU;SAC1B,MAAM,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC;SACtB,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,EAAY,CAAC,CAAC;IAE9B,IAAI,UAAU,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC;QAC1B,MAAM,YAAY,GAAG,UAAU,CAAC,GAAG,CAAC,GAAG,EAAE,CAAC,GAAG,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;QACzD,MAAM,IAAI,GAAG,EAAE;aACZ,OAAO,CACN,yEAAyE,YAAY,GAAG,CACzF;aACA,GAAG,CAAC,GAAG,UAAU,CAMjB,CAAC;QAEJ,MAAM,MAAM,GAAG,IAAI,GAAG,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC;QACnD,KAAK,MAAM,IAAI,IAAI,UAAU,EAAE,CAAC;YAC9B,IAAI,CAAC,IAAI,CAAC,IAAI,EAAE,CAAC;gBACf,MAAM,GAAG,GAAG,MAAM,CAAC,GAAG,CAAC,IAAI,CAAC,EAAY,CAAC,CAAC;gBAC1C,IAAI,GAAG,EAAE,CAAC;oBACR,IAAI,CAAC,IAAI,GAAG,GAAG,CAAC,IAAI,CAAC;oBACrB,IAAI,CAAC,SAAS,GAAG,GAAG,CAAC,UAAU,CAAC;oBAChC,IAAI,CAAC,QAAQ,GAAG,GAAG,CAAC,SAAS,CAAC;oBAC9B,IAAI,CAAC,KAAK,GAAG,GAAG,CAAC,KAAK,CAAC;gBACzB,CAAC;YACH,CAAC;QACH,CAAC;IACH,CAAC;IAED,OAAO,WAAW,CAAC,MAAM,EAAE,KAAK,CAAC,CAAC;AACpC,CAAC;AAED,iFAAiF;AAEjF,SAAS,WAAW,CAAC,OAAuB,EAAE,KAAa;IACzD,OAAO,OAAO,CAAC,KAAK,CAAC,CAAC,EAAE,KAAK,CAAmB,CAAC;AACnD,CAAC;AAED,SAAS,UAAU,CAAC,CAAe,EAAE,CAAe;IAClD,IAAI,GAAG,GAAG,CAAC,CAAC;IACZ,MAAM,GAAG,GAAG,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC,CAAC,MAAM,CAAC,CAAC;IACzC,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,GAAG,EAAE,CAAC,EAAE;QAAE,GAAG,IAAI,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC;IACjD,OAAO,GAAG,CAAC;AACb,CAAC"}
+{"version":3,"file":"hybrid-query.js","sourceRoot":"","sources":["../../../src/search/hybrid-query.ts"],"names":[],"mappings":"AAAA;;;;;;;;;GASG;AAIH,OAAO,EAAE,UAAU,EAAqB,MAAM,UAAU,CAAC;AACzD,OAAO,EAAE,gBAAgB,EAAE,eAAe,EAAE,MAAM,+BAA+B,CAAC;AAClF,OAAO,EAAE,SAAS,EAAE,MAAM,eAAe,CAAC;AAC1C,OAAO,EAAE,SAAS,EAAE,MAAM,yBAAyB,CAAC;AACpD,OAAO,EAAE,mBAAmB,EAAE,MAAM,gBAAgB,CAAC;AAsBrD;;;;;;;GAOG;AACH,MAAM,CAAC,KAAK,UAAU,WAAW,CAC/B,EAAqB,EACrB,KAAa,EACb,UAA8B,EAAE;IAEhC,MAAM,EAAE,KAAK,GAAG,EAAE,EAAE,KAAK,EAAE,QAAQ,EAAE,GAAG,OAAO,CAAC;IAEhD,iFAAiF;IACjF,MAAM,eAAe,GAAG,mBAAmB,CAAC,KAAK,CAAC,CAAC;IAEnD,8EAA8E;IAC9E,MAAM,SAAS,GAAG,EAAE,CAAC;IACrB,MAAM,OAAO,GAAG,SAAS,CAAC,EAAE,EAAE,eAAe,EAAE,SAAS,EAAE,KAAK,CAAC,CAAC;IACjE,MAAM,WAAW,GAAmB,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC;QACtD,EAAE,EAAE,CAAC,CAAC,EAAE;QACR,IAAI,EAAE,CAAC,CAAC,IAAI;QACZ,SAAS,EAAE,CAAC,CAAC,SAAS;QACtB,QAAQ,EAAE,CAAC,CAAC,QAAQ;QACpB,KAAK,EAAE,CAAC,CAAC,KAAK;QACd,KAAK,EAAE,CAAC,CAAC,IAAI;QACb,SAAS,EAAE,CAAC,CAAC,SAAS;QACtB,OAAO,EAAE,CAAC,CAAC,OAAO;KACnB,CAAC,CAAC,CAAC;IAEJ,6EAA6E;IAC7E,MAAM,iBAAiB,GACrB,QAAQ,KAAK,SAAS,IAAI,OAAO,CAAC,GAAG,CAAC,sBAAsB,CAAC,KAAK,MAAM,CAAC;IAE3E,IAAI,CAAC,iBAAiB;QAAE,OAAO,WAAW,CAAC,WAAW,EAAE,KAAK,CAAC,CAAC;IAE/D,MAAM,cAAc,GAAG,eAAe,CAAC,EAAE,CAAC,CAAC;IAC3C,IAAI,cAAc,KAAK,CAAC;QAAE,OAAO,WAAW,CAAC,WAAW,EAAE,KAAK,CAAC,CAAC;IAEjE,8EAA8E;IAC9E,IAAI,QAAsB,CAAC;IAC3B,IAAI,CAAC;QACH,MAAM,EAAE,GAAuC,QAAQ,IAAI,CAAC,MAAM,MAAM,CAAC,eAAe,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,WAAW,EAAE,CAAC,CAAC,CAAC;QACxH,QAAQ,GAAG,MAAM,SAAS,CAAC,eAAe,EAAE,EAAE,CAAC,CAAC;IAClD,CAAC;IAAC,MAAM,CAAC;QACP,gDAAgD;QAChD,OAAO,WAAW,CAAC,WAAW,EAAE,KAAK,CAAC,CAAC;IACzC,CAAC;IAED,6EAA6E;IAC7E,MAAM,OAAO,GAAG,gBAAgB,CAAC,EAAE,CAAC,CAAC;IACrC,MAAM,YAAY,GAAqC,EAAE,CAAC;IAE1D,KAAK,MAAM,CAAC,MAAM,EAAE,GAAG,CAAC,IAAI,OAAO,EAAE,CAAC;QACpC,MAAM,GAAG,GAAG,UAAU,CAAC,QAAQ,EAAE,GAAG,CAAC,CAAC,CAAC,0CAA0C;QACjF,YAAY,CAAC,IAAI,CAAC,EAAE,EAAE,EAAE,MAAM,EAAE,MAAM,EAAE,GAAG,EAAE,CAAC,CAAC;IACjD,CAAC;IAED,uCAAuC;IACvC,YAAY,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,MAAM,GAAG,CAAC,CAAC,MAAM,CAAC,CAAC;IAEjD,2EAA2E;IAC3E,MAAM,QAAQ,GAAG,IAAI,GAAG,CAAC,WAAW,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC;IAC5D,MAAM,aAAa,GAAmB,YAAY,CAAC,GAAG,CAAC,CAAC,EAAE,EAAE,EAAE;QAC5D,MAAM,IAAI,GAAG,QAAQ,CAAC,GAAG,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC;QACjC,OAAO;YACL,EAAE,EAAE,EAAE,CAAC,EAAE;YACT,IAAI,EAAG,IAAI,EAAE,IAA2B,IAAI,EAAE;YAC9C,SAAS,EAAG,IAAI,EAAE,SAAgC,IAAI,EAAE;YACxD,QAAQ,EAAG,IAAI,EAAE,QAAsC,IAAI,IAAI;YAC/D,KAAK,EAAG,IAAI,EAAE,KAA4B,IAAI,EAAE;YAChD,KAAK,EAAE,EAAE,CAAC,MAAM;SACjB,CAAC;IACJ,CAAC,CAAC,CAAC;IAEH,8EAA8E;IAC9E,MAAM,MAAM,GAAG,UAAU,CAAC,WAAW,EAAE,aAAa,CAAC,CAAC;IAEtD,kDAAkD;IAClD,MAAM,UAAU,GAAG,MAAiC,CAAC;IACrD,MAAM,UAAU,GAAG,UAAU;SAC1B,MAAM,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC;SACtB,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,EAAY,CAAC,CAAC;IAE9B,IAAI,UAAU,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC;QAC1B,MAAM,YAAY,GAAG,UAAU,CAAC,GAAG,CAAC,GAAG,EAAE,CAAC,GAAG,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;QACzD,MAAM,IAAI,GAAG,EAAE;aACZ,OAAO,CACN,+FAA+F,YAAY,GAAG,CAC/G;aACA,GAAG,CAAC,GAAG,UAAU,CAQjB,CAAC;QAEJ,MAAM,MAAM,GAAG,IAAI,GAAG,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC;QACnD,KAAK,MAAM,IAAI,IAAI,UAAU,EAAE,CAAC;YAC9B,IAAI,CAAC,IAAI,CAAC,IAAI,EAAE,CAAC;gBACf,MAAM,GAAG,GAAG,MAAM,CAAC,GAAG,CAAC,IAAI,CAAC,EAAY,CAAC,CAAC;gBAC1C,IAAI,GAAG,EAAE,CAAC;oBACR,IAAI,CAAC,IAAI,GAAG,GAAG,CAAC,IAAI,CAAC;oBACrB,IAAI,CAAC,SAAS,GAAG,GAAG,CAAC,UAAU,CAAC;oBAChC,IAAI,CAAC,QAAQ,GAAG,GAAG,CAAC,SAAS,CAAC;oBAC9B,IAAI,CAAC,KAAK,GAAG,GAAG,CAAC,KAAK,CAAC;oBACtB,IAAqB,CAAC,SAAS,GAAG,GAAG,CAAC,UAAU,CAAC;oBACjD,IAAqB,CAAC,OAAO,GAAG,GAAG,CAAC,QAAQ,CAAC;gBAChD,CAAC;YACH,CAAC;QACH,CAAC;IACH,CAAC;IAED,OAAO,WAAW,CAAC,MAAM,EAAE,KAAK,CAAC,CAAC;AACpC,CAAC;AAED,iFAAiF;AAEjF,SAAS,WAAW,CAAC,OAAuB,EAAE,KAAa;IACzD,OAAO,OAAO,CAAC,KAAK,CAAC,CAAC,EAAE,KAAK,CAAmB,CAAC;AACnD,CAAC;AAED,SAAS,UAAU,CAAC,CAAe,EAAE,CAAe;IAClD,IAAI,GAAG,GAAG,CAAC,CAAC;IACZ,MAAM,GAAG,GAAG,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC,CAAC,MAAM,CAAC,CAAC;IACzC,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,GAAG,EAAE,CAAC,EAAE;QAAE,GAAG,IAAI,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC;IACjD,OAAO,GAAG,CAAC;AACb,CAAC"}

package/dist/src/staleness/git-staleness.js

@@ -12,11 +12,11 @@ export function checkStaleness(db, repoPath) {
         // Not a git repo or git not available
         return { isStale: false, indexedAt: null, indexedCommit: null, currentCommit: null, changedSince: [], staleSince: null };
     }
-    // Display short SHA (7 chars) for the interface field; compare full SHAs for correctness
+    // Display short SHA (7 chars) for the interface field; compare short SHAs for staleness
     const indexedCommitShort = indexedCommitFull ? indexedCommitFull.slice(0, 7) : null;
     const currentCommitShort = currentCommit ? currentCommit.slice(0, 7) : null;
-    // 3. If no stored commit or full SHAs match, not stale
-    if (!indexedCommitFull || indexedCommitFull === currentCommit) {
+    // 3. If no stored commit or short SHAs match, not stale
+    if (!indexedCommitFull || indexedCommitShort === currentCommitShort) {
         return { isStale: false, indexedAt: null, indexedCommit: indexedCommitShort, currentCommit: currentCommitShort, changedSince: [], staleSince: null };
     }
     // Guard: indexedCommitFull is read from SQLite — validate before shell interpolation

package/dist/src/staleness/git-staleness.js.map

@@ -1 +1 @@
-{"version":3,"file":"git-staleness.js","sourceRoot":"","sources":["../../../src/staleness/git-staleness.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,QAAQ,EAAE,MAAM,eAAe,CAAC;AAYzC,MAAM,UAAU,cAAc,CAAC,EAAe,EAAE,QAAgB;IAC9D,4BAA4B;IAC5B,MAAM,GAAG,GAAG,EAAE,CAAC,OAAO,CAAC,6DAA6D,CAAC,CAAC,GAAG,EAAmC,CAAC;IAC7H,MAAM,iBAAiB,GAAG,GAAG,EAAE,KAAK,IAAI,IAAI,CAAC;IAE7C,6EAA6E;IAC7E,IAAI,aAAa,GAAkB,IAAI,CAAC;IACxC,IAAI,CAAC;QACH,aAAa,GAAG,QAAQ,CAAC,oBAAoB,EAAE,EAAE,GAAG,EAAE,QAAQ,EAAE,QAAQ,EAAE,MAAM,EAAE,CAAC,CAAC,IAAI,EAAE,CAAC;IAC7F,CAAC;IAAC,MAAM,CAAC;QACP,sCAAsC;QACtC,OAAO,EAAE,OAAO,EAAE,KAAK,EAAE,SAAS,EAAE,IAAI,EAAE,aAAa,EAAE,IAAI,EAAE,aAAa,EAAE,IAAI,EAAE,YAAY,EAAE,EAAE,EAAE,UAAU,EAAE,IAAI,EAAE,CAAC;IAC3H,CAAC;IAED,yFAAyF;IACzF,MAAM,kBAAkB,GAAG,iBAAiB,CAAC,CAAC,CAAC,iBAAiB,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC;IACpF,MAAM,kBAAkB,GAAG,aAAa,CAAC,CAAC,CAAC,aAAa,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC;IAE5E,uDAAuD;IACvD,IAAI,CAAC,iBAAiB,IAAI,iBAAiB,KAAK,aAAa,EAAE,CAAC;QAC9D,OAAO,EAAE,OAAO,EAAE,KAAK,EAAE,SAAS,EAAE,IAAI,EAAE,aAAa,EAAE,kBAAkB,EAAE,aAAa,EAAE,kBAAkB,EAAE,YAAY,EAAE,EAAE,EAAE,UAAU,EAAE,IAAI,EAAE,CAAC;IACvJ,CAAC;IAED,qFAAqF;IACrF,IAAI,CAAC,mBAAmB,CAAC,IAAI,CAAC,iBAAiB,CAAC,EAAE,CAAC;QACjD,OAAO,EAAE,OAAO,EAAE,IAAI,EAAE,SAAS,EAAE,IAAI,EAAE,aAAa,EAAE,kBAAkB,EAAE,aAAa,EAAE,kBAAkB,EAAE,YAAY,EAAE,EAAE,EAAE,UAAU,EAAE,IAAI,EAAE,CAAC;IACtJ,CAAC;IAED,uDAAuD;IACvD,IAAI,YAAY,GAAa,EAAE,CAAC;IAChC,IAAI,CAAC;QACH,MAAM,IAAI,GAAG,QAAQ,CAAC,wBAAwB,iBAAiB,QAAQ,EAAE,EAAE,GAAG,EAAE,QAAQ,EAAE,QAAQ,EAAE,MAAM,EAAE,CAAC,CAAC;QAC9G,YAAY,GAAG,IAAI,CAAC,IAAI,EAAE,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC,MAAM,CAAC,OAAO,CAAC,CAAC;IACzD,CAAC;IAAC,MAAM,CAAC;QACP,YAAY,GAAG,EAAE,CAAC;IACpB,CAAC;IAED,4EAA4E;IAC5E,IAAI,UAAU,GAAkB,IAAI,CAAC;IACrC,IAAI,CAAC;QACH,MAAM,WAAW,GAAG,QAAQ,CAC1B,0BAA0B,iBAAiB,gCAAgC,EAC3E,EAAE,GAAG,EAAE,QAAQ,EAAE,QAAQ,EAAE,MAAM,EAAE,CACpC,CAAC,IAAI,EAAE,CAAC;QACT,UAAU,GAAG,WAAW,IAAI,IAAI,CAAC;IACnC,CAAC;IAAC,MAAM,CAAC;QACP,UAAU,GAAG,IAAI,CAAC;IACpB,CAAC;IAED,OAAO,EAAE,OAAO,EAAE,IAAI,EAAE,SAAS,EAAE,IAAI,EAAE,aAAa,EAAE,kBAAkB,EAAE,aAAa,EAAE,kBAAkB,EAAE,YAAY,EAAE,UAAU,EAAE,CAAC;AAC5I,CAAC"}
+{"version":3,"file":"git-staleness.js","sourceRoot":"","sources":["../../../src/staleness/git-staleness.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,QAAQ,EAAE,MAAM,eAAe,CAAC;AAYzC,MAAM,UAAU,cAAc,CAAC,EAAe,EAAE,QAAgB;IAC9D,4BAA4B;IAC5B,MAAM,GAAG,GAAG,EAAE,CAAC,OAAO,CAAC,6DAA6D,CAAC,CAAC,GAAG,EAAmC,CAAC;IAC7H,MAAM,iBAAiB,GAAG,GAAG,EAAE,KAAK,IAAI,IAAI,CAAC;IAE7C,6EAA6E;IAC7E,IAAI,aAAa,GAAkB,IAAI,CAAC;IACxC,IAAI,CAAC;QACH,aAAa,GAAG,QAAQ,CAAC,oBAAoB,EAAE,EAAE,GAAG,EAAE,QAAQ,EAAE,QAAQ,EAAE,MAAM,EAAE,CAAC,CAAC,IAAI,EAAE,CAAC;IAC7F,CAAC;IAAC,MAAM,CAAC;QACP,sCAAsC;QACtC,OAAO,EAAE,OAAO,EAAE,KAAK,EAAE,SAAS,EAAE,IAAI,EAAE,aAAa,EAAE,IAAI,EAAE,aAAa,EAAE,IAAI,EAAE,YAAY,EAAE,EAAE,EAAE,UAAU,EAAE,IAAI,EAAE,CAAC;IAC3H,CAAC;IAED,wFAAwF;IACxF,MAAM,kBAAkB,GAAG,iBAAiB,CAAC,CAAC,CAAC,iBAAiB,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC;IACpF,MAAM,kBAAkB,GAAG,aAAa,CAAC,CAAC,CAAC,aAAa,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC;IAE5E,wDAAwD;IACxD,IAAI,CAAC,iBAAiB,IAAI,kBAAkB,KAAK,kBAAkB,EAAE,CAAC;QACpE,OAAO,EAAE,OAAO,EAAE,KAAK,EAAE,SAAS,EAAE,IAAI,EAAE,aAAa,EAAE,kBAAkB,EAAE,aAAa,EAAE,kBAAkB,EAAE,YAAY,EAAE,EAAE,EAAE,UAAU,EAAE,IAAI,EAAE,CAAC;IACvJ,CAAC;IAED,qFAAqF;IACrF,IAAI,CAAC,mBAAmB,CAAC,IAAI,CAAC,iBAAiB,CAAC,EAAE,CAAC;QACjD,OAAO,EAAE,OAAO,EAAE,IAAI,EAAE,SAAS,EAAE,IAAI,EAAE,aAAa,EAAE,kBAAkB,EAAE,aAAa,EAAE,kBAAkB,EAAE,YAAY,EAAE,EAAE,EAAE,UAAU,EAAE,IAAI,EAAE,CAAC;IACtJ,CAAC;IAED,uDAAuD;IACvD,IAAI,YAAY,GAAa,EAAE,CAAC;IAChC,IAAI,CAAC;QACH,MAAM,IAAI,GAAG,QAAQ,CAAC,wBAAwB,iBAAiB,QAAQ,EAAE,EAAE,GAAG,EAAE,QAAQ,EAAE,QAAQ,EAAE,MAAM,EAAE,CAAC,CAAC;QAC9G,YAAY,GAAG,IAAI,CAAC,IAAI,EAAE,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC,MAAM,CAAC,OAAO,CAAC,CAAC;IACzD,CAAC;IAAC,MAAM,CAAC;QACP,YAAY,GAAG,EAAE,CAAC;IACpB,CAAC;IAED,4EAA4E;IAC5E,IAAI,UAAU,GAAkB,IAAI,CAAC;IACrC,IAAI,CAAC;QACH,MAAM,WAAW,GAAG,QAAQ,CAC1B,0BAA0B,iBAAiB,gCAAgC,EAC3E,EAAE,GAAG,EAAE,QAAQ,EAAE,QAAQ,EAAE,MAAM,EAAE,CACpC,CAAC,IAAI,EAAE,CAAC;QACT,UAAU,GAAG,WAAW,IAAI,IAAI,CAAC;IACnC,CAAC;IAAC,MAAM,CAAC;QACP,UAAU,GAAG,IAAI,CAAC;IACpB,CAAC;IAED,OAAO,EAAE,OAAO,EAAE,IAAI,EAAE,SAAS,EAAE,IAAI,EAAE,aAAa,EAAE,kBAAkB,EAAE,aAAa,EAAE,kBAAkB,EAAE,YAAY,EAAE,UAAU,EAAE,CAAC;AAC5I,CAAC"}

package/dist/src/storage/db.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"db.d.ts","sourceRoot":"","sources":["../../../src/storage/db.ts"],"names":[],"mappings":"AAAA,OAAO,QAAQ,MAAM,gBAAgB,CAAC;AAUtC,MAAM,MAAM,WAAW,GAAG,QAAQ,CAAC,QAAQ,CAAC;AAE5C,wBAAgB,MAAM,CAAC,MAAM,EAAE,MAAM,GAAG,WAAW,CAWlD;AAED,wBAAgB,OAAO,CAAC,EAAE,EAAE,WAAW,GAAG,IAAI,CAE7C;AAcD,+DAA+D;AAC/D,wBAAgB,aAAa,CAAC,MAAM,EAAE,MAAM,EAAE,OAAO,EAAE,CAAC,EAAE,EAAE,WAAW,KAAK,IAAI,GAAG,IAAI,CActF"}
+{"version":3,"file":"db.d.ts","sourceRoot":"","sources":["../../../src/storage/db.ts"],"names":[],"mappings":"AAAA,OAAO,QAAQ,MAAM,gBAAgB,CAAC;AAUtC,MAAM,MAAM,WAAW,GAAG,QAAQ,CAAC,QAAQ,CAAC;AAE5C,wBAAgB,MAAM,CAAC,MAAM,EAAE,MAAM,GAAG,WAAW,CAWlD;AAED,wBAAgB,OAAO,CAAC,EAAE,EAAE,WAAW,GAAG,IAAI,CAE7C;AAyBD,+DAA+D;AAC/D,wBAAgB,aAAa,CAAC,MAAM,EAAE,MAAM,EAAE,OAAO,EAAE,CAAC,EAAE,EAAE,WAAW,KAAK,IAAI,GAAG,IAAI,CActF"}

package/dist/src/storage/db.js

@@ -30,6 +30,18 @@ function applyMigrations(db) {
     db.exec(FTS_SYNC_TRIGGERS);
     db.exec(CREATE_EMBEDDINGS);
     db.exec(CREATE_WIKI_PAGES);
+    // Schema version table — tracks incremental column additions.
+    db.exec(`CREATE TABLE IF NOT EXISTS schema_version (version INTEGER PRIMARY KEY)`);
+    const row = db.prepare('SELECT MAX(version) AS v FROM schema_version').get();
+    const current = row?.v ?? 0;
+    if (current < 1) {
+        // v1: added `reason TEXT` to edges
+        try {
+            db.exec('ALTER TABLE edges ADD COLUMN reason TEXT');
+        }
+        catch { /* already present */ }
+        db.prepare('INSERT OR REPLACE INTO schema_version VALUES (1)').run();
+    }
 }
 /** Write to a .tmp file then rename for atomic replacement. */
 export function atomicRebuild(dbPath, buildFn) {

package/dist/src/storage/db.js.map

@@ -1 +1 @@
-{"version":3,"file":"db.js","sourceRoot":"","sources":["../../../src/storage/db.ts"],"names":[],"mappings":"AAAA,OAAO,QAAQ,MAAM,gBAAgB,CAAC;AACtC,OAAO,EAAE,SAAS,EAAE,UAAU,EAAE,UAAU,EAAE,UAAU,EAAE,MAAM,IAAI,CAAC;AACnE,OAAO,EAAE,OAAO,EAAE,MAAM,MAAM,CAAC;AAC/B,OAAO,EACL,YAAY,EAAE,YAAY,EAAE,kBAAkB,EAC9C,iBAAiB,EAAE,gBAAgB,EAAE,cAAc,EAAE,iBAAiB,EACtE,iBAAiB,EAAE,iBAAiB,GACrC,MAAM,aAAa,CAAC;AACrB,OAAO,EAAE,cAAc,EAAE,MAAM,aAAa,CAAC;AAI7C,MAAM,UAAU,MAAM,CAAC,MAAc;IACnC,IAAI,CAAC;QACH,SAAS,CAAC,OAAO,CAAC,MAAM,CAAC,EAAE,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC,CAAC;QAChD,MAAM,EAAE,GAAG,IAAI,QAAQ,CAAC,MAAM,CAAC,CAAC;QAChC,EAAE,CAAC,MAAM,CAAC,oBAAoB,CAAC,CAAC;QAChC,EAAE,CAAC,MAAM,CAAC,mBAAmB,CAAC,CAAC;QAC/B,eAAe,CAAC,EAAE,CAAC,CAAC;QACpB,OAAO,EAAE,CAAC;IACZ,CAAC;IAAC,OAAO,GAAG,EAAE,CAAC;QACb,MAAM,IAAI,cAAc,CAAC,8BAA8B,MAAM,EAAE,EAAE,GAAG,CAAC,CAAC;IACxE,CAAC;AACH,CAAC;AAED,MAAM,UAAU,OAAO,CAAC,EAAe;IACrC,EAAE,CAAC,KAAK,EAAE,CAAC;AACb,CAAC;AAED,SAAS,eAAe,CAAC,EAAe;IACtC,EAAE,CAAC,IAAI,CAAC,YAAY,CAAC,CAAC;IACtB,EAAE,CAAC,IAAI,CAAC,YAAY,CAAC,CAAC;IACtB,EAAE,CAAC,IAAI,CAAC,kBAAkB,CAAC,CAAC;IAC5B,EAAE,CAAC,IAAI,CAAC,iBAAiB,CAAC,CAAC;IAC3B,EAAE,CAAC,IAAI,CAAC,gBAAgB,CAAC,CAAC;IAC1B,KAAK,MAAM,GAAG,IAAI,cAAc;QAAE,EAAE,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;IAC/C,EAAE,CAAC,IAAI,CAAC,iBAAiB,CAAC,CAAC;IAC3B,EAAE,CAAC,IAAI,CAAC,iBAAiB,CAAC,CAAC;IAC3B,EAAE,CAAC,IAAI,CAAC,iBAAiB,CAAC,CAAC;AAC7B,CAAC;AAED,+DAA+D;AAC/D,MAAM,UAAU,aAAa,CAAC,MAAc,EAAE,OAAkC;IAC9E,MAAM,OAAO,GAAG,MAAM,GAAG,MAAM,CAAC;IAChC,MAAM,EAAE,GAAG,MAAM,CAAC,OAAO,CAAC,CAAC;IAC3B,IAAI,CAAC;QACH,OAAO,CAAC,EAAE,CAAC,CAAC;QACZ,EAAE,CAAC,KAAK,EAAE,CAAC;QACX,UAAU,CAAC,OAAO,EAAE,MAAM,CAAC,CAAC;IAC9B,CAAC;IAAC,OAAO,GAAG,EAAE,CAAC;QACb,EAAE,CAAC,KAAK,EAAE,CAAC;QACX,IAAI,UAAU,CAAC,OAAO,CAAC,EAAE,CAAC;YACxB,IAAI,CAAC;gBAAC,UAAU,CAAC,OAAO,CAAC,CAAC;YAAC,CAAC;YAAC,MAAM,CAAC,CAAC,YAAY,CAAC,CAAC;QACrD,CAAC;QACD,MAAM,GAAG,CAAC;IACZ,CAAC;AACH,CAAC"}
+{"version":3,"file":"db.js","sourceRoot":"","sources":["../../../src/storage/db.ts"],"names":[],"mappings":"AAAA,OAAO,QAAQ,MAAM,gBAAgB,CAAC;AACtC,OAAO,EAAE,SAAS,EAAE,UAAU,EAAE,UAAU,EAAE,UAAU,EAAE,MAAM,IAAI,CAAC;AACnE,OAAO,EAAE,OAAO,EAAE,MAAM,MAAM,CAAC;AAC/B,OAAO,EACL,YAAY,EAAE,YAAY,EAAE,kBAAkB,EAC9C,iBAAiB,EAAE,gBAAgB,EAAE,cAAc,EAAE,iBAAiB,EACtE,iBAAiB,EAAE,iBAAiB,GACrC,MAAM,aAAa,CAAC;AACrB,OAAO,EAAE,cAAc,EAAE,MAAM,aAAa,CAAC;AAI7C,MAAM,UAAU,MAAM,CAAC,MAAc;IACnC,IAAI,CAAC;QACH,SAAS,CAAC,OAAO,CAAC,MAAM,CAAC,EAAE,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC,CAAC;QAChD,MAAM,EAAE,GAAG,IAAI,QAAQ,CAAC,MAAM,CAAC,CAAC;QAChC,EAAE,CAAC,MAAM,CAAC,oBAAoB,CAAC,CAAC;QAChC,EAAE,CAAC,MAAM,CAAC,mBAAmB,CAAC,CAAC;QAC/B,eAAe,CAAC,EAAE,CAAC,CAAC;QACpB,OAAO,EAAE,CAAC;IACZ,CAAC;IAAC,OAAO,GAAG,EAAE,CAAC;QACb,MAAM,IAAI,cAAc,CAAC,8BAA8B,MAAM,EAAE,EAAE,GAAG,CAAC,CAAC;IACxE,CAAC;AACH,CAAC;AAED,MAAM,UAAU,OAAO,CAAC,EAAe;IACrC,EAAE,CAAC,KAAK,EAAE,CAAC;AACb,CAAC;AAED,SAAS,eAAe,CAAC,EAAe;IACtC,EAAE,CAAC,IAAI,CAAC,YAAY,CAAC,CAAC;IACtB,EAAE,CAAC,IAAI,CAAC,YAAY,CAAC,CAAC;IACtB,EAAE,CAAC,IAAI,CAAC,kBAAkB,CAAC,CAAC;IAC5B,EAAE,CAAC,IAAI,CAAC,iBAAiB,CAAC,CAAC;IAC3B,EAAE,CAAC,IAAI,CAAC,gBAAgB,CAAC,CAAC;IAC1B,KAAK,MAAM,GAAG,IAAI,cAAc;QAAE,EAAE,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;IAC/C,EAAE,CAAC,IAAI,CAAC,iBAAiB,CAAC,CAAC;IAC3B,EAAE,CAAC,IAAI,CAAC,iBAAiB,CAAC,CAAC;IAC3B,EAAE,CAAC,IAAI,CAAC,iBAAiB,CAAC,CAAC;IAE3B,8DAA8D;IAC9D,EAAE,CAAC,IAAI,CAAC,yEAAyE,CAAC,CAAC;IACnF,MAAM,GAAG,GAAG,EAAE,CAAC,OAAO,CAAC,8CAA8C,CAAC,CAAC,GAAG,EAA0B,CAAC;IACrG,MAAM,OAAO,GAAG,GAAG,EAAE,CAAC,IAAI,CAAC,CAAC;IAE5B,IAAI,OAAO,GAAG,CAAC,EAAE,CAAC;QAChB,mCAAmC;QACnC,IAAI,CAAC;YAAC,EAAE,CAAC,IAAI,CAAC,0CAA0C,CAAC,CAAC;QAAC,CAAC;QAAC,MAAM,CAAC,CAAC,qBAAqB,CAAC,CAAC;QAC5F,EAAE,CAAC,OAAO,CAAC,kDAAkD,CAAC,CAAC,GAAG,EAAE,CAAC;IACvE,CAAC;AACH,CAAC;AAED,+DAA+D;AAC/D,MAAM,UAAU,aAAa,CAAC,MAAc,EAAE,OAAkC;IAC9E,MAAM,OAAO,GAAG,MAAM,GAAG,MAAM,CAAC;IAChC,MAAM,EAAE,GAAG,MAAM,CAAC,OAAO,CAAC,CAAC;IAC3B,IAAI,CAAC;QACH,OAAO,CAAC,EAAE,CAAC,CAAC;QACZ,EAAE,CAAC,KAAK,EAAE,CAAC;QACX,UAAU,CAAC,OAAO,EAAE,MAAM,CAAC,CAAC;IAC9B,CAAC;IAAC,OAAO,GAAG,EAAE,CAAC;QACb,EAAE,CAAC,KAAK,EAAE,CAAC;QACX,IAAI,UAAU,CAAC,OAAO,CAAC,EAAE,CAAC;YACxB,IAAI,CAAC;gBAAC,UAAU,CAAC,OAAO,CAAC,CAAC;YAAC,CAAC;YAAC,MAAM,CAAC,CAAC,YAAY,CAAC,CAAC;QACrD,CAAC;QACD,MAAM,GAAG,CAAC;IACZ,CAAC;AACH,CAAC"}

package/dist/src/storage/edge-store.d.ts

@@ -2,6 +2,8 @@ import type Database from 'better-sqlite3';
 import type { MonographEdge } from '../types.js';
 export declare function insertEdge(db: Database.Database, edge: MonographEdge): void;
 export declare function insertEdges(db: Database.Database, edges: MonographEdge[]): void;
+/** Batch-fetch edges for multiple source IDs using a single SQL IN query. Batches at 50 IDs. */
+export declare function getEdgesForSources(db: Database.Database, sourceIds: string[]): MonographEdge[];
 export declare function getEdgesForSource(db: Database.Database, sourceId: string): MonographEdge[];
 export declare function getEdgesForTarget(db: Database.Database, targetId: string): MonographEdge[];
 export declare function deleteEdgesForFile(db: Database.Database, filePath: string): void;

package/dist/src/storage/edge-store.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"edge-store.d.ts","sourceRoot":"","sources":["../../../src/storage/edge-store.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,QAAQ,MAAM,gBAAgB,CAAC;AAC3C,OAAO,KAAK,EAAiB,aAAa,EAAE,MAAM,aAAa,CAAC;AAEhE,wBAAgB,UAAU,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,IAAI,EAAE,aAAa,GAAG,IAAI,CAc3E;AAED,wBAAgB,WAAW,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,KAAK,EAAE,aAAa,EAAE,GAAG,IAAI,CAO/E;AAED,wBAAgB,iBAAiB,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,QAAQ,EAAE,MAAM,GAAG,aAAa,EAAE,CAK1F;AAED,wBAAgB,iBAAiB,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,QAAQ,EAAE,MAAM,GAAG,aAAa,EAAE,CAK1F;AAED,wBAAgB,kBAAkB,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,QAAQ,EAAE,MAAM,GAAG,IAAI,CAIhF;AAED,wBAAgB,UAAU,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,GAAG,MAAM,CAGxD"}
+{"version":3,"file":"edge-store.d.ts","sourceRoot":"","sources":["../../../src/storage/edge-store.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,QAAQ,MAAM,gBAAgB,CAAC;AAC3C,OAAO,KAAK,EAAiB,aAAa,EAAE,MAAM,aAAa,CAAC;AAEhE,wBAAgB,UAAU,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,IAAI,EAAE,aAAa,GAAG,IAAI,CAc3E;AAOD,wBAAgB,WAAW,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,KAAK,EAAE,aAAa,EAAE,GAAG,IAAI,CAmB/E;AAED,gGAAgG;AAChG,wBAAgB,kBAAkB,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,SAAS,EAAE,MAAM,EAAE,GAAG,aAAa,EAAE,CAa9F;AAED,wBAAgB,iBAAiB,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,QAAQ,EAAE,MAAM,GAAG,aAAa,EAAE,CAK1F;AAED,wBAAgB,iBAAiB,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,QAAQ,EAAE,MAAM,GAAG,aAAa,EAAE,CAK1F;AAED,wBAAgB,kBAAkB,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,QAAQ,EAAE,MAAM,GAAG,IAAI,CAIhF;AAED,wBAAgB,UAAU,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,GAAG,MAAM,CAGxD"}

package/dist/src/storage/edge-store.js

@@ -4,14 +4,39 @@ export function insertEdge(db, edge) {
     VALUES (?, ?, ?, ?, ?, ?, ?, ?)
   `).run(edge.id, edge.sourceId, edge.targetId, edge.relation, edge.confidence, edge.confidenceScore, edge.reason ?? null, edge.evidence != null ? JSON.stringify(edge.evidence) : null);
 }
+const INSERT_EDGE_SQL = `
+    INSERT OR REPLACE INTO edges (id, source_id, target_id, relation, confidence, confidence_score, reason, evidence)
+    VALUES (?, ?, ?, ?, ?, ?, ?, ?)
+  `;
 export function insertEdges(db, edges) {
+    if (edges.length === 0)
+        return;
+    // Prepare once and reuse across all rows — avoids N redundant prepare calls
+    const stmt = db.prepare(INSERT_EDGE_SQL);
     const insertMany = db.transaction((rows) => {
         for (const e of rows) {
-            insertEdge(db, e);
+            stmt.run(e.id, e.sourceId, e.targetId, e.relation, e.confidence, e.confidenceScore, e.reason ?? null, e.evidence != null ? JSON.stringify(e.evidence) : null);
         }
     });
     insertMany(edges);
 }
+/** Batch-fetch edges for multiple source IDs using a single SQL IN query. Batches at 50 IDs. */
+export function getEdgesForSources(db, sourceIds) {
+    if (sourceIds.length === 0)
+        return [];
+    const BATCH = 50;
+    const results = [];
+    for (let i = 0; i < sourceIds.length; i += BATCH) {
+        const chunk = sourceIds.slice(i, i + BATCH);
+        const placeholders = chunk.map(() => '?').join(',');
+        const rows = db
+            .prepare(`SELECT * FROM edges WHERE source_id IN (${placeholders})`)
+            .all(...chunk);
+        for (const row of rows)
+            results.push(rowToEdge(row));
+    }
+    return results;
+}
 export function getEdgesForSource(db, sourceId) {
     const rows = db
         .prepare('SELECT * FROM edges WHERE source_id = ?')

package/dist/src/storage/edge-store.js.map

@@ -1 +1 @@
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+{"version":3,"file":"edge-store.js","sourceRoot":"","sources":["../../../src/storage/edge-store.ts"],"names":[],"mappings":"AAGA,MAAM,UAAU,UAAU,CAAC,EAAqB,EAAE,IAAmB;IACnE,EAAE,CAAC,OAAO,CAAC;;;GAGV,CAAC,CAAC,GAAG,CACJ,IAAI,CAAC,EAAE,EACP,IAAI,CAAC,QAAQ,EACb,IAAI,CAAC,QAAQ,EACb,IAAI,CAAC,QAAQ,EACb,IAAI,CAAC,UAAU,EACf,IAAI,CAAC,eAAe,EACpB,IAAI,CAAC,MAAM,IAAI,IAAI,EACnB,IAAI,CAAC,QAAQ,IAAI,IAAI,CAAC,CAAC,CAAC,IAAI,CAAC,SAAS,CAAC,IAAI,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,IAAI,CAC7D,CAAC;AACJ,CAAC;AAED,MAAM,eAAe,GAAG;;;GAGrB,CAAC;AAEJ,MAAM,UAAU,WAAW,CAAC,EAAqB,EAAE,KAAsB;IACvE,IAAI,KAAK,CAAC,MAAM,KAAK,CAAC;QAAE,OAAO;IAC/B,4EAA4E;IAC5E,MAAM,IAAI,GAAG,EAAE,CAAC,OAAO,CAAC,eAAe,CAAC,CAAC;IACzC,MAAM,UAAU,GAAG,EAAE,CAAC,WAAW,CAAC,CAAC,IAAqB,EAAE,EAAE;QAC1D,KAAK,MAAM,CAAC,IAAI,IAAI,EAAE,CAAC;YACrB,IAAI,CAAC,GAAG,CACN,CAAC,CAAC,EAAE,EACJ,CAAC,CAAC,QAAQ,EACV,CAAC,CAAC,QAAQ,EACV,CAAC,CAAC,QAAQ,EACV,CAAC,CAAC,UAAU,EACZ,CAAC,CAAC,eAAe,EACjB,CAAC,CAAC,MAAM,IAAI,IAAI,EAChB,CAAC,CAAC,QAAQ,IAAI,IAAI,CAAC,CAAC,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,IAAI,CACvD,CAAC;QACJ,CAAC;IACH,CAAC,CAAC,CAAC;IACH,UAAU,CAAC,KAAK,CAAC,CAAC;AACpB,CAAC;AAED,gGAAgG;AAChG,MAAM,UAAU,kBAAkB,CAAC,EAAqB,EAAE,SAAmB;IAC3E,IAAI,SAAS,CAAC,MAAM,KAAK,CAAC;QAAE,OAAO,EAAE,CAAC;IACtC,MAAM,KAAK,GAAG,EAAE,CAAC;IACjB,MAAM,OAAO,GAAoB,EAAE,CAAC;IACpC,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,SAAS,CAAC,MAAM,EAAE,CAAC,IAAI,KAAK,EAAE,CAAC;QACjD,MAAM,KAAK,GAAG,SAAS,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,GAAG,KAAK,CAAC,CAAC;QAC5C,MAAM,YAAY,GAAG,KAAK,CAAC,GAAG,CAAC,GAAG,EAAE,CAAC,GAAG,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;QACpD,MAAM,IAAI,GAAG,EAAE;aACZ,OAAO,CAAC,2CAA2C,YAAY,GAAG,CAAC;aACnE,GAAG,CAAC,GAAG,KAAK,CAA8B,CAAC;QAC9C,KAAK,MAAM,GAAG,IAAI,IAAI;YAAE,OAAO,CAAC,IAAI,CAAC,SAAS,CAAC,GAAG,CAAC,CAAC,CAAC;IACvD,CAAC;IACD,OAAO,OAAO,CAAC;AACjB,CAAC;AAED,MAAM,UAAU,iBAAiB,CAAC,EAAqB,EAAE,QAAgB;IACvE,MAAM,IAAI,GAAG,EAAE;SACZ,OAAO,CAAC,yCAAyC,CAAC;SAClD,GAAG,CAAC,QAAQ,CAA8B,CAAC;IAC9C,OAAO,IAAI,CAAC,GAAG,CAAC,SAAS,CAAC,CAAC;AAC7B,CAAC;AAED,MAAM,UAAU,iBAAiB,CAAC,EAAqB,EAAE,QAAgB;IACvE,MAAM,IAAI,GAAG,EAAE;SACZ,OAAO,CAAC,yCAAyC,CAAC;SAClD,GAAG,CAAC,QAAQ,CAA8B,CAAC;IAC9C,OAAO,IAAI,CAAC,GAAG,CAAC,SAAS,CAAC,CAAC;AAC7B,CAAC;AAED,MAAM,UAAU,kBAAkB,CAAC,EAAqB,EAAE,QAAgB;IACxE,EAAE,CAAC,OAAO,CAAC;;GAEV,CAAC,CAAC,GAAG,CAAC,QAAQ,CAAC,CAAC;AACnB,CAAC;AAED,MAAM,UAAU,UAAU,CAAC,EAAqB;IAC9C,MAAM,GAAG,GAAG,EAAE,CAAC,OAAO,CAAC,iCAAiC,CAAC,CAAC,GAAG,EAAmB,CAAC;IACjF,OAAO,GAAG,CAAC,CAAC,CAAC;AACf,CAAC;AAED,SAAS,SAAS,CAAC,GAA4B;IAC7C,OAAO;QACL,EAAE,EAAE,GAAG,CAAC,EAAY;QACpB,QAAQ,EAAE,GAAG,CAAC,SAAmB;QACjC,QAAQ,EAAE,GAAG,CAAC,SAAmB;QACjC,QAAQ,EAAE,GAAG,CAAC,QAAqC;QACnD,UAAU,EAAE,GAAG,CAAC,UAAyC;QACzD,eAAe,EAAE,GAAG,CAAC,gBAA0B;QAC/C,MAAM,EAAE,GAAG,CAAC,MAA4B;QACxC,QAAQ,EAAE,GAAG,CAAC,QAAQ,CAAC,CAAC,CAAC,IAAI,CAAC,KAAK,CAAC,GAAG,CAAC,QAAkB,CAAoB,CAAC,CAAC,CAAC,SAAS;KAC3F,CAAC;AACJ,CAAC"}

package/dist/src/storage/embedding-store.d.ts

@@ -4,7 +4,23 @@ import type Database from 'better-sqlite3';
  *
  * Vectors are stored as BLOBs (raw Float32Array bytes) and reconstructed on read.
  */
+/**
+ * Ensure the embeddings table has the content_hash column introduced in a later
+ * schema version. Call this ONCE before a batch of upserts rather than inside
+ * upsertEmbedding itself to avoid running ALTER TABLE on every row write.
+ */
+export declare function ensureEmbeddingSchema(db: Database.Database): void;
 export declare function upsertEmbedding(db: Database.Database, nodeId: string, vector: Float32Array, contentHash?: string): void;
+/**
+ * Bulk-upsert multiple embeddings in a single transaction.
+ * Calls ensureEmbeddingSchema once before writing, then wraps all inserts in
+ * a transaction for 10-100x faster throughput vs per-row upsertEmbedding calls.
+ */
+export declare function batchUpsertEmbeddings(db: Database.Database, entries: Array<{
+    nodeId: string;
+    vector: Float32Array;
+    contentHash?: string;
+}>): void;
 export declare function getEmbeddingContentHash(db: Database.Database, nodeId: string): string | null;
 export declare function isEmbeddingStale(db: Database.Database, nodeId: string, currentHash: string): boolean;
 export declare function getEmbedding(db: Database.Database, nodeId: string): Float32Array | null;

package/dist/src/storage/embedding-store.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"embedding-store.d.ts","sourceRoot":"","sources":["../../../src/storage/embedding-store.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,QAAQ,MAAM,gBAAgB,CAAC;AAE3C;;;;GAIG;AAEH;;;;GAIG;AACH,wBAAgB,qBAAqB,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,GAAG,IAAI,CAMjE;AAED,wBAAgB,eAAe,CAC7B,EAAE,EAAE,QAAQ,CAAC,QAAQ,EACrB,MAAM,EAAE,MAAM,EACd,MAAM,EAAE,YAAY,EACpB,WAAW,CAAC,EAAE,MAAM,GACnB,IAAI,CAON;AAED;;;;GAIG;AACH,wBAAgB,qBAAqB,CACnC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EACrB,OAAO,EAAE,KAAK,CAAC;IAAE,MAAM,EAAE,MAAM,CAAC;IAAC,MAAM,EAAE,YAAY,CAAC;IAAC,WAAW,CAAC,EAAE,MAAM,CAAA;CAAE,CAAC,GAC7E,IAAI,CAeN;AAED,wBAAgB,uBAAuB,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,MAAM,EAAE,MAAM,GAAG,MAAM,GAAG,IAAI,CAK5F;AAED,wBAAgB,gBAAgB,CAC9B,EAAE,EAAE,QAAQ,CAAC,QAAQ,EACrB,MAAM,EAAE,MAAM,EACd,WAAW,EAAE,MAAM,GAClB,OAAO,CAGT;AAED,wBAAgB,YAAY,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,MAAM,EAAE,MAAM,GAAG,YAAY,GAAG,IAAI,CAMvF;AAED,wBAAgB,gBAAgB,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,GAAG,GAAG,CAAC,MAAM,EAAE,YAAY,CAAC,CAUjF;AAED,wBAAgB,eAAe,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,GAAG,MAAM,CAG7D"}

package/dist/src/storage/embedding-store.js

@@ -3,19 +3,43 @@
  *
  * Vectors are stored as BLOBs (raw Float32Array bytes) and reconstructed on read.
  */
-export function upsertEmbedding(db, nodeId, vector, contentHash) {
-    // Migrate existing DBs that may not have the content_hash column yet.
+/**
+ * Ensure the embeddings table has the content_hash column introduced in a later
+ * schema version. Call this ONCE before a batch of upserts rather than inside
+ * upsertEmbedding itself to avoid running ALTER TABLE on every row write.
+ */
+export function ensureEmbeddingSchema(db) {
     try {
         db.exec('ALTER TABLE embeddings ADD COLUMN content_hash TEXT');
     }
     catch {
         // Column already exists — ignore.
     }
+}
+export function upsertEmbedding(db, nodeId, vector, contentHash) {
     const buf = Buffer.from(vector.buffer, vector.byteOffset, vector.byteLength);
     db
         .prepare('INSERT OR REPLACE INTO embeddings (node_id, vector, content_hash) VALUES (?, ?, ?)')
         .run(nodeId, buf, contentHash ?? null);
 }
+/**
+ * Bulk-upsert multiple embeddings in a single transaction.
+ * Calls ensureEmbeddingSchema once before writing, then wraps all inserts in
+ * a transaction for 10-100x faster throughput vs per-row upsertEmbedding calls.
+ */
+export function batchUpsertEmbeddings(db, entries) {
+    if (entries.length === 0)
+        return;
+    ensureEmbeddingSchema(db);
+    const stmt = db.prepare('INSERT OR REPLACE INTO embeddings (node_id, vector, content_hash) VALUES (?, ?, ?)');
+    const insertMany = db.transaction((rows) => {
+        for (const e of rows) {
+            const buf = Buffer.from(e.vector.buffer, e.vector.byteOffset, e.vector.byteLength);
+            stmt.run(e.nodeId, buf, e.contentHash ?? null);
+        }
+    });
+    insertMany(entries);
+}
 export function getEmbeddingContentHash(db, nodeId) {
     const row = db
         .prepare('SELECT content_hash FROM embeddings WHERE node_id = ?')

package/dist/src/storage/embedding-store.js.map

@@ -1 +1 @@
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+{"version":3,"file":"embedding-store.js","sourceRoot":"","sources":["../../../src/storage/embedding-store.ts"],"names":[],"mappings":"AAEA;;;;GAIG;AAEH;;;;GAIG;AACH,MAAM,UAAU,qBAAqB,CAAC,EAAqB;IACzD,IAAI,CAAC;QACH,EAAE,CAAC,IAAI,CAAC,qDAAqD,CAAC,CAAC;IACjE,CAAC;IAAC,MAAM,CAAC;QACP,kCAAkC;IACpC,CAAC;AACH,CAAC;AAED,MAAM,UAAU,eAAe,CAC7B,EAAqB,EACrB,MAAc,EACd,MAAoB,EACpB,WAAoB;IAEpB,MAAM,GAAG,GAAG,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,UAAU,EAAE,MAAM,CAAC,UAAU,CAAC,CAAC;IAC7E,EAAE;SACC,OAAO,CACN,oFAAoF,CACrF;SACA,GAAG,CAAC,MAAM,EAAE,GAAG,EAAE,WAAW,IAAI,IAAI,CAAC,CAAC;AAC3C,CAAC;AAED;;;;GAIG;AACH,MAAM,UAAU,qBAAqB,CACnC,EAAqB,EACrB,OAA8E;IAE9E,IAAI,OAAO,CAAC,MAAM,KAAK,CAAC;QAAE,OAAO;IACjC,qBAAqB,CAAC,EAAE,CAAC,CAAC;IAC1B,MAAM,IAAI,GAAG,EAAE,CAAC,OAAO,CACrB,oFAAoF,CACrF,CAAC;IACF,MAAM,UAAU,GAAG,EAAE,CAAC,WAAW,CAC/B,CAAC,IAA2E,EAAE,EAAE;QAC9E,KAAK,MAAM,CAAC,IAAI,IAAI,EAAE,CAAC;YACrB,MAAM,GAAG,GAAG,MAAM,CAAC,IAAI,CAAC,CAAC,CAAC,MAAM,CAAC,MAAM,EAAE,CAAC,CAAC,MAAM,CAAC,UAAU,EAAE,CAAC,CAAC,MAAM,CAAC,UAAU,CAAC,CAAC;YACnF,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC,MAAM,EAAE,GAAG,EAAE,CAAC,CAAC,WAAW,IAAI,IAAI,CAAC,CAAC;QACjD,CAAC;IACH,CAAC,CACF,CAAC;IACF,UAAU,CAAC,OAAO,CAAC,CAAC;AACtB,CAAC;AAED,MAAM,UAAU,uBAAuB,CAAC,EAAqB,EAAE,MAAc;IAC3E,MAAM,GAAG,GAAG,EAAE;SACX,OAAO,CAAC,uDAAuD,CAAC;SAChE,GAAG,CAAC,MAAM,CAAgD,CAAC;IAC9D,OAAO,GAAG,EAAE,YAAY,IAAI,IAAI,CAAC;AACnC,CAAC;AAED,MAAM,UAAU,gBAAgB,CAC9B,EAAqB,EACrB,MAAc,EACd,WAAmB;IAEnB,MAAM,MAAM,GAAG,uBAAuB,CAAC,EAAE,EAAE,MAAM,CAAC,CAAC;IACnD,OAAO,MAAM,KAAK,WAAW,CAAC;AAChC,CAAC;AAED,MAAM,UAAU,YAAY,CAAC,EAAqB,EAAE,MAAc;IAChE,MAAM,GAAG,GAAG,EAAE,CAAC,OAAO,CAAC,iDAAiD,CAAC,CAAC,GAAG,CAAC,MAAM,CAEvE,CAAC;IACd,IAAI,CAAC,GAAG;QAAE,OAAO,IAAI,CAAC;IACtB,OAAO,YAAY,CAAC,GAAG,CAAC,MAAM,CAAC,CAAC;AAClC,CAAC;AAED,MAAM,UAAU,gBAAgB,CAAC,EAAqB;IACpD,MAAM,IAAI,GAAG,EAAE,CAAC,OAAO,CAAC,wCAAwC,CAAC,CAAC,GAAG,EAGlE,CAAC;IACJ,MAAM,MAAM,GAAG,IAAI,GAAG,EAAwB,CAAC;IAC/C,KAAK,MAAM,GAAG,IAAI,IAAI,EAAE,CAAC;QACvB,MAAM,CAAC,GAAG,CAAC,GAAG,CAAC,OAAO,EAAE,YAAY,CAAC,GAAG,CAAC,MAAM,CAAC,CAAC,CAAC;IACpD,CAAC;IACD,OAAO,MAAM,CAAC;AAChB,CAAC;AAED,MAAM,UAAU,eAAe,CAAC,EAAqB;IACnD,MAAM,GAAG,GAAG,EAAE,CAAC,OAAO,CAAC,sCAAsC,CAAC,CAAC,GAAG,EAAmB,CAAC;IACtF,OAAO,GAAG,CAAC,CAAC,CAAC;AACf,CAAC;AAED,iFAAiF;AAEjF,SAAS,YAAY,CAAC,GAAW;IAC/B,mEAAmE;IACnE,MAAM,EAAE,GAAG,GAAG,CAAC,MAAM,CAAC,KAAK,CAAC,GAAG,CAAC,UAAU,EAAE,GAAG,CAAC,UAAU,GAAG,GAAG,CAAC,UAAU,CAAC,CAAC;IAC7E,OAAO,IAAI,YAAY,CAAC,EAAE,CAAC,CAAC;AAC9B,CAAC"}

package/dist/src/storage/file-cache.d.ts

@@ -9,6 +9,11 @@ export interface FileCacheEntry {
 export declare function hashFileContent(content: string): string;
 export declare function isFileCached(db: MonographDb, filePath: string, contentHash: string): boolean;
 export declare function updateFileCache(db: MonographDb, entry: FileCacheEntry): void;
+/**
+ * Bulk-upsert multiple file cache entries in a single transaction.
+ * Prefer this over calling updateFileCache in a loop for pipeline batch writes.
+ */
+export declare function batchUpdateFileCache(db: MonographDb, entries: FileCacheEntry[]): void;
 export declare function getFileCacheStats(db: MonographDb): {
     totalCached: number;
     hitRate: number;

package/dist/src/storage/file-cache.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"file-cache.d.ts","sourceRoot":"","sources":["../../../src/storage/file-cache.ts"],"names":[],"mappings":"AACA,OAAO,KAAK,EAAE,WAAW,EAAE,MAAM,SAAS,CAAC;AAE3C,MAAM,WAAW,cAAc;IAC7B,QAAQ,EAAE,MAAM,CAAC;IACjB,WAAW,EAAE,MAAM,CAAC;IACpB,UAAU,EAAE,MAAM,CAAC;IACnB,SAAS,EAAE,MAAM,CAAC;IAClB,SAAS,EAAE,MAAM,CAAC;CACnB;AAED,wBAAgB,eAAe,CAAC,OAAO,EAAE,MAAM,GAAG,MAAM,CAEvD;AAED,wBAAgB,YAAY,CAAC,EAAE,EAAE,WAAW,EAAE,QAAQ,EAAE,MAAM,EAAE,WAAW,EAAE,MAAM,GAAG,OAAO,CAK5F;AAED,wBAAgB,eAAe,CAAC,EAAE,EAAE,WAAW,EAAE,KAAK,EAAE,cAAc,GAAG,IAAI,CAK5E;AAED,wBAAgB,iBAAiB,CAAC,EAAE,EAAE,WAAW,GAAG;IAClD,WAAW,EAAE,MAAM,CAAC;IACpB,OAAO,EAAE,MAAM,CAAC;IAChB,UAAU,EAAE,MAAM,EAAE,CAAC;CACtB,CA0BA;AAED,wBAAgB,cAAc,CAAC,EAAE,EAAE,WAAW,GAAG,IAAI,CAEpD"}
+{"version":3,"file":"file-cache.d.ts","sourceRoot":"","sources":["../../../src/storage/file-cache.ts"],"names":[],"mappings":"AACA,OAAO,KAAK,EAAE,WAAW,EAAE,MAAM,SAAS,CAAC;AAE3C,MAAM,WAAW,cAAc;IAC7B,QAAQ,EAAE,MAAM,CAAC;IACjB,WAAW,EAAE,MAAM,CAAC;IACpB,UAAU,EAAE,MAAM,CAAC;IACnB,SAAS,EAAE,MAAM,CAAC;IAClB,SAAS,EAAE,MAAM,CAAC;CACnB;AAED,wBAAgB,eAAe,CAAC,OAAO,EAAE,MAAM,GAAG,MAAM,CAEvD;AAED,wBAAgB,YAAY,CAAC,EAAE,EAAE,WAAW,EAAE,QAAQ,EAAE,MAAM,EAAE,WAAW,EAAE,MAAM,GAAG,OAAO,CAK5F;AAED,wBAAgB,eAAe,CAAC,EAAE,EAAE,WAAW,EAAE,KAAK,EAAE,cAAc,GAAG,IAAI,CAK5E;AAED;;;GAGG;AACH,wBAAgB,oBAAoB,CAAC,EAAE,EAAE,WAAW,EAAE,OAAO,EAAE,cAAc,EAAE,GAAG,IAAI,CAYrF;AAED,wBAAgB,iBAAiB,CAAC,EAAE,EAAE,WAAW,GAAG;IAClD,WAAW,EAAE,MAAM,CAAC;IACpB,OAAO,EAAE,MAAM,CAAC;IAChB,UAAU,EAAE,MAAM,EAAE,CAAC;CACtB,CAsBA;AAED,wBAAgB,cAAc,CAAC,EAAE,EAAE,WAAW,GAAG,IAAI,CAEpD"}

package/dist/src/storage/file-cache.js

@@ -12,16 +12,42 @@ export function updateFileCache(db, entry) {
     VALUES (?, ?, ?, ?, ?)
   `).run(entry.filePath, entry.contentHash, entry.lastParsed, entry.nodeCount, entry.edgeCount);
 }
+/**
+ * Bulk-upsert multiple file cache entries in a single transaction.
+ * Prefer this over calling updateFileCache in a loop for pipeline batch writes.
+ */
+export function batchUpdateFileCache(db, entries) {
+    if (entries.length === 0)
+        return;
+    const stmt = db.prepare(`
+    INSERT OR REPLACE INTO file_cache (file_path, content_hash, last_parsed, node_count, edge_count)
+    VALUES (?, ?, ?, ?, ?)
+  `);
+    const insertMany = db.transaction((rows) => {
+        for (const e of rows) {
+            stmt.run(e.filePath, e.contentHash, e.lastParsed, e.nodeCount, e.edgeCount);
+        }
+    });
+    insertMany(entries);
+}
 export function getFileCacheStats(db) {
-    const totalCached = db.prepare('SELECT COUNT(*) as c FROM file_cache').get().c;
-    const totalNodes = db.prepare("SELECT COUNT(DISTINCT file_path) as c FROM nodes WHERE file_path IS NOT NULL").get().c;
-    const hitRate = totalNodes > 0 ? totalCached / totalNodes : 0;
-    // Find stale paths: cached entries whose file no longer exists in nodes table
-    const cachedPaths = db.prepare('SELECT file_path, content_hash FROM file_cache').all();
-    const indexedPaths = new Set(db.prepare("SELECT DISTINCT file_path FROM nodes WHERE file_path IS NOT NULL").all().map(r => r.file_path));
-    const stalePaths = cachedPaths
-        .filter(r => !indexedPaths.has(r.file_path))
-        .map(r => r.file_path);
+    // Single query: count cached entries and distinct indexed file paths in one pass.
+    const counts = db.prepare(`
+    SELECT
+      (SELECT COUNT(*) FROM file_cache) AS total_cached,
+      (SELECT COUNT(DISTINCT file_path) FROM nodes WHERE file_path IS NOT NULL) AS total_indexed
+  `).get();
+    const totalCached = counts.total_cached;
+    const hitRate = counts.total_indexed > 0 ? totalCached / counts.total_indexed : 0;
+    // Find stale paths via SQL LEFT JOIN — avoids loading all rows into JS memory.
+    const stalePaths = db.prepare(`
+    SELECT fc.file_path
+    FROM file_cache fc
+    LEFT JOIN (
+      SELECT DISTINCT file_path FROM nodes WHERE file_path IS NOT NULL
+    ) n ON fc.file_path = n.file_path
+    WHERE n.file_path IS NULL
+  `).all().map(r => r.file_path);
     return { totalCached, hitRate, stalePaths };
 }
 export function clearFileCache(db) {

package/dist/src/storage/file-cache.js.map

@@ -1 +1 @@
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+{"version":3,"file":"file-cache.js","sourceRoot":"","sources":["../../../src/storage/file-cache.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,UAAU,EAAE,MAAM,QAAQ,CAAC;AAWpC,MAAM,UAAU,eAAe,CAAC,OAAe;IAC7C,OAAO,UAAU,CAAC,QAAQ,CAAC,CAAC,MAAM,CAAC,OAAO,CAAC,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC;AAC5D,CAAC;AAED,MAAM,UAAU,YAAY,CAAC,EAAe,EAAE,QAAgB,EAAE,WAAmB;IACjF,MAAM,GAAG,GAAG,EAAE,CAAC,OAAO,CACpB,yDAAyD,CAC1D,CAAC,GAAG,CAAC,QAAQ,CAAyC,CAAC;IACxD,OAAO,GAAG,EAAE,YAAY,KAAK,WAAW,CAAC;AAC3C,CAAC;AAED,MAAM,UAAU,eAAe,CAAC,EAAe,EAAE,KAAqB;IACpE,EAAE,CAAC,OAAO,CAAC;;;GAGV,CAAC,CAAC,GAAG,CAAC,KAAK,CAAC,QAAQ,EAAE,KAAK,CAAC,WAAW,EAAE,KAAK,CAAC,UAAU,EAAE,KAAK,CAAC,SAAS,EAAE,KAAK,CAAC,SAAS,CAAC,CAAC;AAChG,CAAC;AAED;;;GAGG;AACH,MAAM,UAAU,oBAAoB,CAAC,EAAe,EAAE,OAAyB;IAC7E,IAAI,OAAO,CAAC,MAAM,KAAK,CAAC;QAAE,OAAO;IACjC,MAAM,IAAI,GAAG,EAAE,CAAC,OAAO,CAAC;;;GAGvB,CAAC,CAAC;IACH,MAAM,UAAU,GAAG,EAAE,CAAC,WAAW,CAAC,CAAC,IAAsB,EAAE,EAAE;QAC3D,KAAK,MAAM,CAAC,IAAI,IAAI,EAAE,CAAC;YACrB,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC,QAAQ,EAAE,CAAC,CAAC,WAAW,EAAE,CAAC,CAAC,UAAU,EAAE,CAAC,CAAC,SAAS,EAAE,CAAC,CAAC,SAAS,CAAC,CAAC;QAC9E,CAAC;IACH,CAAC,CAAC,CAAC;IACH,UAAU,CAAC,OAAO,CAAC,CAAC;AACtB,CAAC;AAED,MAAM,UAAU,iBAAiB,CAAC,EAAe;IAK/C,kFAAkF;IAClF,MAAM,MAAM,GAAG,EAAE,CAAC,OAAO,CAAC;;;;GAIzB,CAAC,CAAC,GAAG,EAAqD,CAAC;IAE5D,MAAM,WAAW,GAAG,MAAM,CAAC,YAAY,CAAC;IACxC,MAAM,OAAO,GAAG,MAAM,CAAC,aAAa,GAAG,CAAC,CAAC,CAAC,CAAC,WAAW,GAAG,MAAM,CAAC,aAAa,CAAC,CAAC,CAAC,CAAC,CAAC;IAElF,+EAA+E;IAC/E,MAAM,UAAU,GAAI,EAAE,CAAC,OAAO,CAAC;;;;;;;GAO9B,CAAC,CAAC,GAAG,EAA8B,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC;IAE3D,OAAO,EAAE,WAAW,EAAE,OAAO,EAAE,UAAU,EAAE,CAAC;AAC9C,CAAC;AAED,MAAM,UAAU,cAAc,CAAC,EAAe;IAC5C,EAAE,CAAC,OAAO,CAAC,wBAAwB,CAAC,CAAC,GAAG,EAAE,CAAC;AAC7C,CAAC"}

package/dist/src/storage/fts-store.d.ts

@@ -6,6 +6,10 @@ export interface FtsResult {
     filePath: string | null;
     label: string;
     rank: number;
+    /** First line of the symbol in its source file (1-based, null if unknown). */
+    startLine: number | null;
+    /** Last line of the symbol in its source file (1-based, null if unknown). */
+    endLine: number | null;
 }
 export declare function ftsSearch(db: Database.Database, query: string, limit: number, label?: string): FtsResult[];
 export interface HybridSearchResult extends FtsResult {

package/dist/src/storage/fts-store.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"fts-store.d.ts","sourceRoot":"","sources":["../../../src/storage/fts-store.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,QAAQ,MAAM,gBAAgB,CAAC;AAE3C,MAAM,WAAW,SAAS;IACxB,EAAE,EAAE,MAAM,CAAC;IACX,IAAI,EAAE,MAAM,CAAC;IACb,SAAS,EAAE,MAAM,CAAC;IAClB,QAAQ,EAAE,MAAM,GAAG,IAAI,CAAC;IACxB,KAAK,EAAE,MAAM,CAAC;IACd,IAAI,EAAE,MAAM,CAAC;CACd;AAED,wBAAgB,SAAS,CACvB,EAAE,EAAE,QAAQ,CAAC,QAAQ,EACrB,KAAK,EAAE,MAAM,EACb,KAAK,EAAE,MAAM,EACb,KAAK,CAAC,EAAE,MAAM,GACb,SAAS,EAAE,CA4Eb;AAID,MAAM,WAAW,kBAAmB,SAAQ,SAAS;IACnD,aAAa,EAAE,MAAM,CAAC;IACtB,aAAa,EAAE,KAAK,GAAG,MAAM,GAAG,OAAO,CAAC;CACzC;AAyCD;;;;;;;;GAQG;AACH,wBAAgB,YAAY,CAC1B,EAAE,EAAE,QAAQ,CAAC,QAAQ,EACrB,KAAK,EAAE,MAAM,EACb,KAAK,EAAE,MAAM,EACb,KAAK,CAAC,EAAE,MAAM,GACb,kBAAkB,EAAE,CAqEtB"}
+{"version":3,"file":"fts-store.d.ts","sourceRoot":"","sources":["../../../src/storage/fts-store.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,QAAQ,MAAM,gBAAgB,CAAC;AAE3C,MAAM,WAAW,SAAS;IACxB,EAAE,EAAE,MAAM,CAAC;IACX,IAAI,EAAE,MAAM,CAAC;IACb,SAAS,EAAE,MAAM,CAAC;IAClB,QAAQ,EAAE,MAAM,GAAG,IAAI,CAAC;IACxB,KAAK,EAAE,MAAM,CAAC;IACd,IAAI,EAAE,MAAM,CAAC;IACb,8EAA8E;IAC9E,SAAS,EAAE,MAAM,GAAG,IAAI,CAAC;IACzB,6EAA6E;IAC7E,OAAO,EAAE,MAAM,GAAG,IAAI,CAAC;CACxB;AAED,wBAAgB,SAAS,CACvB,EAAE,EAAE,QAAQ,CAAC,QAAQ,EACrB,KAAK,EAAE,MAAM,EACb,KAAK,EAAE,MAAM,EACb,KAAK,CAAC,EAAE,MAAM,GACb,SAAS,EAAE,CA8Eb;AAID,MAAM,WAAW,kBAAmB,SAAQ,SAAS;IACnD,aAAa,EAAE,MAAM,CAAC;IACtB,aAAa,EAAE,KAAK,GAAG,MAAM,GAAG,OAAO,CAAC;CACzC;AAyCD;;;;;;;;GAQG;AACH,wBAAgB,YAAY,CAC1B,EAAE,EAAE,QAAQ,CAAC,QAAQ,EACrB,KAAK,EAAE,MAAM,EACb,KAAK,EAAE,MAAM,EACb,KAAK,CAAC,EAAE,MAAM,GACb,kBAAkB,EAAE,CAwEtB"}

package/dist/src/storage/fts-store.js

@@ -8,7 +8,7 @@ export function ftsSearch(db, query, limit, label) {
     const ftsQuery = safeQuery.split(/\s+/).join(' ');
     let matchSql = `
     SELECT n.id, n.name, n.norm_label, n.file_path, n.label,
-           nodes_fts.rank
+           n.start_line, n.end_line, nodes_fts.rank
     FROM nodes_fts
     JOIN nodes n ON n.rowid = nodes_fts.rowid
     WHERE nodes_fts MATCH ?
@@ -34,7 +34,7 @@ export function ftsSearch(db, query, limit, label) {
         const likePattern = `%${escapedQuery}%`;
         let likeSql = `
       SELECT n.id, n.name, n.norm_label, n.file_path, n.label,
-             0 AS rank
+             n.start_line, n.end_line, 0 AS rank
       FROM nodes n
       WHERE (n.name LIKE ? OR n.norm_label LIKE ? OR n.file_path LIKE ?)
     `;
@@ -62,6 +62,8 @@ export function ftsSearch(db, query, limit, label) {
         filePath: r.file_path ?? null,
         label: r.label,
         rank: r.rank,
+        startLine: r.start_line ?? null,
+        endLine: r.end_line ?? null,
     }));
 }
 /**
@@ -141,7 +143,8 @@ export function hybridSearch(db, query, limit, label) {
         const escapedSafeQuery = safeQuery.replace(/%/g, '\\%').replace(/_/g, '\\_');
         const likePattern = `%${escapedSafeQuery}%`;
         let likeSql = `
-      SELECT n.id, n.name, n.norm_label, n.file_path, n.label
+      SELECT n.id, n.name, n.norm_label, n.file_path, n.label,
+             n.start_line, n.end_line
       FROM nodes n
       WHERE (n.name LIKE ? OR n.norm_label LIKE ?)
     `;
@@ -167,6 +170,8 @@ export function hybridSearch(db, query, limit, label) {
                 filePath: r.file_path ?? null,
                 label: lbl,
                 rank: 0,
+                startLine: r.start_line ?? null,
+                endLine: r.end_line ?? null,
                 combinedScore: combined,
                 matchStrategy: 'like',
             });

package/dist/src/storage/fts-store.js.map

@@ -1 +1 @@
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package/dist/src/storage/node-store.d.ts

@@ -2,6 +2,8 @@ import type Database from 'better-sqlite3';
 import type { MonographNode } from '../types.js';
 export declare function insertNode(db: Database.Database, node: MonographNode): void;
 export declare function insertNodes(db: Database.Database, nodes: MonographNode[]): void;
+/** Batch-fetch multiple nodes by ID using a single SQL IN query. Batches at 50 IDs. */
+export declare function getNodesByIds(db: Database.Database, ids: string[]): MonographNode[];
 export declare function getNode(db: Database.Database, id: string): MonographNode | undefined;
 export declare function getNodesForFile(db: Database.Database, filePath: string): MonographNode[];
 export declare function deleteNodesForFile(db: Database.Database, filePath: string): void;

package/dist/src/storage/node-store.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"node-store.d.ts","sourceRoot":"","sources":["../../../src/storage/node-store.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,QAAQ,MAAM,gBAAgB,CAAC;AAC3C,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,aAAa,CAAC;AAGjD,wBAAgB,UAAU,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,IAAI,EAAE,aAAa,GAAG,IAAI,CAmB3E;AAED,wBAAgB,WAAW,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,KAAK,EAAE,aAAa,EAAE,GAAG,IAAI,CAO/E;AAED,wBAAgB,OAAO,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,EAAE,EAAE,MAAM,GAAG,aAAa,GAAG,SAAS,CAKpF;AAED,wBAAgB,eAAe,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,QAAQ,EAAE,MAAM,GAAG,aAAa,EAAE,CAKxF;AAED,wBAAgB,kBAAkB,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,QAAQ,EAAE,MAAM,GAAG,IAAI,CAEhF;AAED,wBAAgB,UAAU,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,GAAG,MAAM,CAGxD;AAID,MAAM,WAAW,WAAW;IAC1B,KAAK,EAAE,MAAM,CAAC;IACd,IAAI,EAAE,MAAM,CAAC;IACb,WAAW,EAAE,MAAM,CAAC;IACpB,WAAW,EAAE,MAAM,CAAC;IACpB,YAAY,EAAE,MAAM,EAAE,GAAG,IAAI,CAAC;IAC9B,WAAW,EAAE,MAAM,GAAG,IAAI,CAAC;IAC3B,SAAS,EAAE,OAAO,CAAC;CACpB;AAcD,+CAA+C;AAC/C,wBAAgB,cAAc,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,GAAG,WAAW,EAAE,CAGnE;AAED,uCAAuC;AACvC,wBAAgB,WAAW,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,KAAK,EAAE,MAAM,GAAG,WAAW,GAAG,IAAI,CAGpF;AAED,2CAA2C;AAC3C,wBAAgB,cAAc,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,GAAG,EAAE,WAAW,GAAG,IAAI,CAoB5E;AAED;;;;;;GAMG;AACH,wBAAgB,eAAe,CAC7B,EAAE,EAAE,QAAQ,CAAC,QAAQ,EACrB,KAAK,EAAE,MAAM,EACb,KAAK,EAAE,MAAM,GAAG,MAAM,GAAG,OAAO,EAChC,UAAU,GAAE,GAAG,GAAG,MAAM,GAAG,GAAG,GAAG,GAAS,EAC1C,KAAK,SAAM,GACV,KAAK,CAAC;IAAE,EAAE,EAAE,MAAM,CAAC;IAAC,IAAI,EAAE,MAAM,CAAC;IAAC,KAAK,EAAE,MAAM,CAAC;IAAC,QAAQ,EAAE,MAAM,GAAG,IAAI,CAAC;IAAC,aAAa,EAAE,OAAO,CAAA;CAAE,CAAC,CAyBrG"}
+{"version":3,"file":"node-store.d.ts","sourceRoot":"","sources":["../../../src/storage/node-store.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,QAAQ,MAAM,gBAAgB,CAAC;AAC3C,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,aAAa,CAAC;AAGjD,wBAAgB,UAAU,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,IAAI,EAAE,aAAa,GAAG,IAAI,CAmB3E;AASD,wBAAgB,WAAW,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,KAAK,EAAE,aAAa,EAAE,GAAG,IAAI,CAsB/E;AAED,uFAAuF;AACvF,wBAAgB,aAAa,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,GAAG,EAAE,MAAM,EAAE,GAAG,aAAa,EAAE,CAanF;AAED,wBAAgB,OAAO,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,EAAE,EAAE,MAAM,GAAG,aAAa,GAAG,SAAS,CAKpF;AAED,wBAAgB,eAAe,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,QAAQ,EAAE,MAAM,GAAG,aAAa,EAAE,CAKxF;AAED,wBAAgB,kBAAkB,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,QAAQ,EAAE,MAAM,GAAG,IAAI,CAEhF;AAED,wBAAgB,UAAU,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,GAAG,MAAM,CAGxD;AAID,MAAM,WAAW,WAAW;IAC1B,KAAK,EAAE,MAAM,CAAC;IACd,IAAI,EAAE,MAAM,CAAC;IACb,WAAW,EAAE,MAAM,CAAC;IACpB,WAAW,EAAE,MAAM,CAAC;IACpB,YAAY,EAAE,MAAM,EAAE,GAAG,IAAI,CAAC;IAC9B,WAAW,EAAE,MAAM,GAAG,IAAI,CAAC;IAC3B,SAAS,EAAE,OAAO,CAAC;CACpB;AAcD,+CAA+C;AAC/C,wBAAgB,cAAc,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,GAAG,WAAW,EAAE,CAGnE;AAED,uCAAuC;AACvC,wBAAgB,WAAW,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,KAAK,EAAE,MAAM,GAAG,WAAW,GAAG,IAAI,CAGpF;AAED,2CAA2C;AAC3C,wBAAgB,cAAc,CAAC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EAAE,GAAG,EAAE,WAAW,GAAG,IAAI,CAoB5E;AAED;;;;;;GAMG;AACH,wBAAgB,eAAe,CAC7B,EAAE,EAAE,QAAQ,CAAC,QAAQ,EACrB,KAAK,EAAE,MAAM,EACb,KAAK,EAAE,MAAM,GAAG,MAAM,GAAG,OAAO,EAChC,UAAU,GAAE,GAAG,GAAG,MAAM,GAAG,GAAG,GAAG,GAAS,EAC1C,KAAK,SAAM,GACV,KAAK,CAAC;IAAE,EAAE,EAAE,MAAM,CAAC;IAAC,IAAI,EAAE,MAAM,CAAC;IAAC,KAAK,EAAE,MAAM,CAAC;IAAC,QAAQ,EAAE,MAAM,GAAG,IAAI,CAAC;IAAC,aAAa,EAAE,OAAO,CAAA;CAAE,CAAC,CAyBrG"}

package/dist/src/storage/node-store.js

@@ -7,14 +7,41 @@ export function insertNode(db, node) {
     VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?)
   `).run(node.id, node.label, node.name, node.normLabel ?? toNormLabel(node.name), node.filePath ?? null, node.startLine ?? null, node.endLine ?? null, node.communityId ?? null, node.isExported ? 1 : 0, node.language ?? null, node.properties ? JSON.stringify(node.properties) : null);
 }
+const INSERT_SQL = `
+    INSERT OR REPLACE INTO nodes
+      (id, label, name, norm_label, file_path, start_line, end_line,
+       community_id, is_exported, language, properties)
+    VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?)
+  `;
 export function insertNodes(db, nodes) {
+    if (nodes.length === 0)
+        return;
+    // Prepare once and reuse across all rows — avoids N redundant prepare calls
+    const stmt = db.prepare(INSERT_SQL);
     const insertMany = db.transaction((rows) => {
         for (const n of rows) {
-            insertNode(db, n);
+            stmt.run(n.id, n.label, n.name, n.normLabel ?? toNormLabel(n.name), n.filePath ?? null, n.startLine ?? null, n.endLine ?? null, n.communityId ?? null, n.isExported ? 1 : 0, n.language ?? null, n.properties ? JSON.stringify(n.properties) : null);
         }
     });
     insertMany(nodes);
 }
+/** Batch-fetch multiple nodes by ID using a single SQL IN query. Batches at 50 IDs. */
+export function getNodesByIds(db, ids) {
+    if (ids.length === 0)
+        return [];
+    const BATCH = 50;
+    const results = [];
+    for (let i = 0; i < ids.length; i += BATCH) {
+        const chunk = ids.slice(i, i + BATCH);
+        const placeholders = chunk.map(() => '?').join(',');
+        const rows = db
+            .prepare(`SELECT * FROM nodes WHERE id IN (${placeholders})`)
+            .all(...chunk);
+        for (const row of rows)
+            results.push(rowToNode(row));
+    }
+    return results;
+}
 export function getNode(db, id) {
     const row = db
         .prepare('SELECT * FROM nodes WHERE id = ?')

package/dist/src/storage/node-store.js.map

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+{"version":3,"file":"wiki-generator.d.ts","sourceRoot":"","sources":["../../../src/wiki/wiki-generator.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,WAAW,EAAE,MAAM,kBAAkB,CAAC;AAEpD,OAAO,EAAE,cAAc,EAAE,WAAW,EAAE,aAAa,EAAE,MAAM,iBAAiB,CAAC;AAC7E,OAAO,EAAW,KAAK,SAAS,EAAE,MAAM,gBAAgB,CAAC;AAEzD,YAAY,EAAE,SAAS,EAAE,MAAM,gBAAgB,CAAC;AAChD,YAAY,EAAE,WAAW,EAAE,WAAW,EAAE,MAAM,gBAAgB,CAAC;AAE/D,MAAM,WAAW,oBAAoB;IACnC,QAAQ,EAAE,MAAM,CAAC;IACjB,UAAU,CAAC,EAAE,OAAO,CAAC;IACrB,EAAE,CAAC,EAAE,WAAW,CAAC;CAClB;AAED,MAAM,WAAW,mBAAmB;IAClC,UAAU,CAAC,EAAE,OAAO,CAAC;IACrB,iBAAiB,CAAC,EAAE,OAAO,EAAE,CAAC;IAC9B,KAAK,EAAE,MAAM,EAAE,CAAC;IAChB,SAAS,EAAE,MAAM,CAAC;CACnB;AAED;;;GAGG;AACH,wBAAsB,YAAY,CAAC,OAAO,EAAE,oBAAoB,GAAG,OAAO,CAAC,mBAAmB,CAAC,CAiC9F;AAED,MAAM,WAAW,SAAS;IACxB,QAAQ,EAAE,CAAC,MAAM,EAAE,MAAM,KAAK,OAAO,CAAC,MAAM,CAAC,CAAC;CAC/C;AAED,MAAM,WAAW,uBAAuB;IACtC,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,4DAA4D;IAC5D,SAAS,CAAC,EAAE,SAAS,CAAC;IACtB,2EAA2E;IAC3E,SAAS,CAAC,EAAE,SAAS,CAAC;CACvB;AAED,MAAM,WAAW,2BAA2B;IAC1C,KAAK,CAAC,EAAE,OAAO,CAAC;IAChB,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,WAAW,CAAC,EAAE,MAAM,CAAC;IACrB,SAAS,CAAC,EAAE,SAAS,CAAC;IACtB,2EAA2E;IAC3E,SAAS,CAAC,EAAE,SAAS,CAAC;CACvB;AAED,MAAM,WAAW,iBAAiB;IAChC,SAAS,EAAE,MAAM,CAAC;IAClB,OAAO,EAAE,MAAM,CAAC;IAChB,MAAM,EAAE,MAAM,CAAC;CAChB;AAED;;;GAGG;AACH,wBAAsB,gBAAgB,CACpC,EAAE,EAAE,WAAW,EACf,WAAW,EAAE,MAAM,EACnB,OAAO,CAAC,EAAE,uBAAuB,GAChC,OAAO,CAAC,MAAM,CAAC,CA0EjB;AAED;;GAEG;AACH,wBAAsB,oBAAoB,CACxC,EAAE,EAAE,WAAW,EACf,OAAO,CAAC,EAAE,2BAA2B,GACpC,OAAO,CAAC,iBAAiB,CAAC,CAyC5B;AAED,OAAO,EAAE,cAAc,EAAE,WAAW,EAAE,aAAa,EAAE,CAAC"}

package/dist/src/wiki/wiki-generator.js

@@ -100,7 +100,11 @@ export async function generateWikiPage(db, communityId, options) {
         const block = msg.content[0];
         content = (block?.type === 'text') ? block.text : '';
     }
-    // 7. Persist to DB
+    // 7. Persist to DB — prepend OKF frontmatter if not already present
+    if (!content.startsWith('---')) {
+        const safeLabel = label.replace(/\\/g, '\\\\').replace(/"/g, '\\"');
+        content = `---\ntype: Code Community Wiki\ntitle: "${safeLabel}"\ntags: [monograph, wiki]\ntimestamp: ${new Date().toISOString()}\n---\n\n${content}`;
+    }
     upsertWikiPage(db, communityIdStr, content);
     return content;
 }