@mirnoorata/codexa 0.2.0

package/dist/session-memory/store.js

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+import { createHash } from "node:crypto";
+import { normalizePath, stableId, uniqueSorted } from "../util.js";
+import { MAX_DETAILS_CHARS, MAX_EVIDENCE_PER_ENTRY, MAX_REFS_PER_ENTRY, MAX_SUMMARY_CHARS } from "./model.js";
+export function normalizeEntryInput(input) {
+    const taskId = normalizeIdentifier(input.taskId);
+    const provenance = normalizeWriteProvenance(input.entry.provenance ?? "agent-asserted", input.source, input.toolName);
+    const evidenceTier = normalizeWritableEvidenceTier(input.entry.evidenceTier, provenance);
+    const confidence = normalizeWritableConfidence(input.entry.confidence, provenance);
+    const summary = clampText(input.entry.summary, MAX_SUMMARY_CHARS);
+    const scope = normalizeScope(input.entry.scope, input.entry.evidence, input.repoRoot);
+    const key = normalizeMemoryKey(input.entry.key) ?? defaultMemoryKey(taskId, input.entry.kind, summary, scope);
+    const id = stableId("session-memory-entry", input.sessionId, taskId ?? "", input.entry.kind, key);
+    const evidence = normalizeEvidence({
+        entryId: id,
+        repoRoot: input.repoRoot,
+        provenance,
+        evidence: input.entry.evidence,
+        fallback: {
+            id: stableId("session-memory-evidence", id, input.source, input.toolName ?? "", input.callId, input.createdAt),
+            provenance,
+            source: input.source,
+            sourceRef: input.toolName ? `${input.toolName}:${input.callId}` : input.callId,
+            toolName: input.toolName,
+            callId: input.callId,
+            taskId,
+            evidenceTier,
+            confidence,
+            snapshotId: input.freshness.snapshotId,
+            indexedAt: input.freshness.indexedAt,
+            headCommit: input.freshness.headCommit,
+            note: input.task ? clampText(input.task, MAX_SUMMARY_CHARS) : undefined
+        }
+    });
+    return {
+        id,
+        type: "SessionMemoryEntry",
+        source: sourceFactSource(provenance),
+        confidence,
+        snapshotId: input.freshness.snapshotId,
+        indexedAt: input.freshness.indexedAt,
+        sessionId: input.sessionId,
+        taskId,
+        kind: input.entry.kind,
+        key,
+        summary,
+        details: input.entry.details ? clampText(input.entry.details, MAX_DETAILS_CHARS) : undefined,
+        provenance,
+        status: input.entry.status ?? "active",
+        evidenceTier,
+        scope,
+        evidence,
+        createdAt: input.createdAt,
+        updatedAt: input.createdAt,
+        supersedes: uniqueSorted(input.entry.supersedes ?? []),
+        staleBecause: []
+    };
+}
+export function upsertEntry(store, next) {
+    const entries = store.entries.map((entry) => ({ ...entry }));
+    for (const supersededId of next.supersedes) {
+        const superseded = entries.find((entry) => entry.id === supersededId);
+        if (superseded) {
+            superseded.status = "superseded";
+            superseded.supersededBy = next.id;
+            superseded.updatedAt = next.updatedAt;
+        }
+    }
+    const existingIndex = entries.findIndex((entry) => entry.id === next.id);
+    const existing = existingIndex >= 0 ? entries[existingIndex] : undefined;
+    if (!existing) {
+        entries.push(next);
+        return { ...store, entries };
+    }
+    const mergedScope = mergeScopes(existing.scope, next.scope);
+    const mergedEvidence = mergeEvidence(existing.evidence, next.evidence);
+    Object.assign(existing, {
+        source: next.source,
+        summary: next.kind === "viewed" ? existing.summary : next.summary,
+        details: next.details ?? existing.details,
+        status: mergeStatus(existing.status, next.status),
+        confidence: mergeConfidence(existing.confidence, next.confidence),
+        snapshotId: next.snapshotId,
+        indexedAt: next.indexedAt,
+        evidenceTier: mergeEvidenceTier(existing.evidenceTier, next.evidenceTier),
+        scope: mergedScope,
+        evidence: mergedEvidence,
+        updatedAt: next.updatedAt,
+        supersedes: uniqueSorted([...existing.supersedes, ...next.supersedes]),
+        staleBecause: []
+    });
+    entries[existingIndex] = sanitizeEntryTrust(existing);
+    return { ...store, entries };
+}
+function normalizeWriteProvenance(provenance, source, toolName) {
+    return provenance === "codexa-derived" && !(source === "mcp_tool" && toolName) ? "agent-asserted" : provenance;
+}
+function normalizeWritableConfidence(confidence, provenance) {
+    return provenance === "codexa-derived" ? confidence : "heuristic";
+}
+function normalizeWritableEvidenceTier(evidenceTier, provenance) {
+    if (provenance === "codexa-derived") {
+        return evidenceTier;
+    }
+    return evidenceTier === "fallback" ? "fallback" : "heuristic";
+}
+function mergeStatus(existing, next) {
+    if ((existing === "superseded" || existing === "rejected" || existing === "resolved") && next === "active") {
+        return existing;
+    }
+    return next;
+}
+export function sanitizeStoreTrust(store) {
+    return {
+        ...store,
+        entries: store.entries.map(sanitizeEntryTrust)
+    };
+}
+function sanitizeEntryTrust(entry) {
+    if (entry.provenance === "codexa-derived") {
+        return entry;
+    }
+    const confidence = normalizeWritableConfidence(entry.confidence, entry.provenance);
+    const evidenceTier = normalizeWritableEvidenceTier(entry.evidenceTier, entry.provenance);
+    return {
+        ...entry,
+        source: sourceFactSource(entry.provenance),
+        confidence,
+        evidenceTier,
+        evidence: entry.evidence.map((evidence) => ({
+            ...evidence,
+            provenance: entry.provenance,
+            source: "agent",
+            confidence: normalizeWritableConfidence(evidence.confidence, entry.provenance),
+            evidenceTier: normalizeWritableEvidenceTier(evidence.evidenceTier, entry.provenance)
+        }))
+    };
+}
+export function markStoreStaleness(store, freshness) {
+    if (!freshness) {
+        return store;
+    }
+    const dirty = new Set(freshness.dirtyFiles.map(normalizePath));
+    return {
+        ...store,
+        entries: store.entries.map((entry) => {
+            const reasons = [];
+            const latestEvidence = latestEvidenceForStaleness(entry.evidence);
+            if (latestEvidence?.headCommit && freshness.headCommit && latestEvidence.headCommit !== freshness.headCommit) {
+                reasons.push("head commit changed");
+            }
+            const scopedFiles = [...entry.scope.files, ...entry.scope.tests].map(normalizePath);
+            const dirtyOverlap = scopedFiles.filter((file) => dirty.has(file));
+            if (dirtyOverlap.length > 0 && entry.snapshotId !== freshness.snapshotId) {
+                reasons.push(`scope dirty: ${dirtyOverlap.slice(0, 5).join(", ")}`);
+            }
+            return reasons.length > 0
+                ? {
+                    ...entry,
+                    status: entry.status === "active" ? "stale" : entry.status,
+                    staleBecause: uniqueSorted([...entry.staleBecause, ...reasons])
+                }
+                : {
+                    ...entry,
+                    status: entry.status === "stale" ? "active" : entry.status,
+                    staleBecause: []
+                };
+        })
+    };
+}
+function latestEvidenceForStaleness(evidence) {
+    return evidence
+        .slice()
+        .sort((left, right) => (Date.parse(right.indexedAt) || 0) - (Date.parse(left.indexedAt) || 0) || right.id.localeCompare(left.id))[0];
+}
+function normalizeScope(scope, evidence, repoRoot) {
+    const refs = uniqueRefs([...(scope?.refs ?? []), ...(evidence ?? []).flatMap((item) => evidenceRef(item))]).slice(0, MAX_REFS_PER_ENTRY);
+    const refFiles = refs
+        .filter((ref) => ref.kind !== "test" && ref.path && refFileKinds.has(ref.kind))
+        .map((ref) => ref.path)
+        .filter((value) => Boolean(value));
+    const files = normalizePathList([...(scope?.files ?? []), ...refFiles]);
+    const tests = normalizePathList([...(scope?.tests ?? []), ...refs.filter((ref) => ref.kind === "test").map((ref) => ref.path ?? ref.id)]);
+    const symbols = normalizeIdentifierList([...(scope?.symbols ?? []), ...refs.filter((ref) => ref.kind === "symbol").map((ref) => ref.id)]);
+    const workflows = normalizeIdentifierList([...(scope?.workflows ?? []), ...refs.filter((ref) => ref.kind === "workflow").map((ref) => ref.id)]);
+    const topics = uniqueSorted((scope?.topics ?? []).map((topic) => clampText(topic.replaceAll(repoRoot, "<repo>"), MAX_SUMMARY_CHARS))).slice(0, 40);
+    return { files, symbols, tests, workflows, topics, refs };
+}
+function normalizePathList(values) {
+    return uniqueSorted(values.map((value) => normalizePath(clampText(value, 500))).filter(Boolean)).slice(0, MAX_REFS_PER_ENTRY);
+}
+function normalizeIdentifierList(values) {
+    return uniqueSorted(values.map((value) => clampText(value, 240)).filter(Boolean)).slice(0, MAX_REFS_PER_ENTRY);
+}
+function evidenceRef(evidence) {
+    if (!evidence.path) {
+        return [];
+    }
+    return [
+        {
+            kind: evidence.factType === "GraphEdge" ? "graph_edge" : "file",
+            id: evidence.sourceRef,
+            path: evidence.path,
+            edgeKind: evidence.edgeKind,
+            evidenceTier: evidence.evidenceTier,
+            confidence: evidence.confidence
+        }
+    ];
+}
+function normalizeEvidence(input) {
+    const trustedCodexaEvidence = input.provenance === "codexa-derived";
+    const entries = input.evidence && input.evidence.length > 0
+        ? trustedCodexaEvidence
+            ? input.evidence
+            : [...input.evidence, input.fallback]
+        : [input.fallback];
+    return mergeEvidence([], entries.map((entry, index) => {
+        return {
+            ...entry,
+            id: normalizeIdentifier(entry.id) ?? stableId("session-memory-evidence", input.entryId, String(index), entry.sourceRef),
+            source: trustedCodexaEvidence ? entry.source : "agent",
+            sourceRef: clampText(entry.sourceRef.replaceAll(input.repoRoot, "<repo>"), MAX_SUMMARY_CHARS),
+            path: entry.path ? normalizePath(entry.path.replaceAll(input.repoRoot, "<repo>")) : undefined,
+            note: entry.note ? clampText(entry.note.replaceAll(input.repoRoot, "<repo>"), MAX_SUMMARY_CHARS) : undefined,
+            provenance: trustedCodexaEvidence ? (entry.provenance ?? input.provenance) : input.provenance,
+            evidenceTier: trustedCodexaEvidence ? entry.evidenceTier : normalizeWritableEvidenceTier(entry.evidenceTier, input.provenance),
+            confidence: trustedCodexaEvidence ? entry.confidence : normalizeWritableConfidence(entry.confidence, input.provenance),
+            snapshotId: trustedCodexaEvidence ? entry.snapshotId : input.fallback.snapshotId,
+            indexedAt: trustedCodexaEvidence ? entry.indexedAt : input.fallback.indexedAt,
+            headCommit: trustedCodexaEvidence ? entry.headCommit : input.fallback.headCommit
+        };
+    }));
+}
+function mergeScopes(a, b) {
+    return {
+        files: uniqueSorted([...a.files, ...b.files]).slice(0, MAX_REFS_PER_ENTRY),
+        symbols: uniqueSorted([...a.symbols, ...b.symbols]).slice(0, MAX_REFS_PER_ENTRY),
+        tests: uniqueSorted([...a.tests, ...b.tests]).slice(0, MAX_REFS_PER_ENTRY),
+        workflows: uniqueSorted([...a.workflows, ...b.workflows]).slice(0, MAX_REFS_PER_ENTRY),
+        topics: uniqueSorted([...a.topics, ...b.topics]).slice(0, 40),
+        refs: uniqueRefs([...a.refs, ...b.refs]).slice(0, MAX_REFS_PER_ENTRY)
+    };
+}
+function mergeEvidence(a, b) {
+    const byId = new Map();
+    for (const entry of [...a, ...b]) {
+        byId.set(entry.id, entry);
+    }
+    const entries = [...byId.values()];
+    const newest = latestEvidenceForStaleness(entries);
+    const selected = entries
+        .sort((left, right) => evidenceTierScore(left.evidenceTier) - evidenceTierScore(right.evidenceTier) ||
+        confidenceScore(left.confidence) - confidenceScore(right.confidence) ||
+        left.sourceRef.localeCompare(right.sourceRef) ||
+        left.id.localeCompare(right.id))
+        .slice(0, MAX_EVIDENCE_PER_ENTRY);
+    if (newest && !selected.some((entry) => entry.id === newest.id)) {
+        selected[selected.length > 0 ? selected.length - 1 : 0] = newest;
+    }
+    return selected;
+}
+function mergeConfidence(a, b) {
+    return confidenceScore(a) <= confidenceScore(b) ? a : b;
+}
+function mergeEvidenceTier(a, b) {
+    return evidenceTierScore(a) <= evidenceTierScore(b) ? a : b;
+}
+function sourceFactSource(provenance) {
+    return provenance === "codexa-derived" ? "mcp-tool" : "codex-agent";
+}
+function defaultMemoryKey(taskId, kind, summary, scope) {
+    if (kind === "viewed") {
+        return `viewed:${stableId("viewed", taskId ?? "", scope.refs.map(refKey).sort().join("\n")).slice(0, 24)}`;
+    }
+    return `${kind}:${stableId("memory-key", taskId ?? "", summary, scope.files.join("\n"), scope.symbols.join("\n")).slice(0, 24)}`;
+}
+export function emptyStore(sessionId) {
+    const now = new Date().toISOString();
+    return {
+        schemaVersion: 1,
+        sessionId,
+        repoRoot: ".",
+        createdAt: now,
+        updatedAt: now,
+        revision: 0,
+        entries: [],
+        compaction: {
+            sourceEventCount: 0,
+            retainedEntryCount: 0,
+            droppedEntryCount: 0
+        }
+    };
+}
+export function refKey(ref) {
+    return [ref.kind, ref.id, ref.path ?? "", ref.edgeKind ?? "", ref.fromId ?? "", ref.toId ?? ""].join(":");
+}
+export function uniqueRefs(refs) {
+    const byKey = new Map();
+    for (const ref of refs) {
+        const normalized = {
+            ...ref,
+            path: ref.path ? normalizePath(ref.path) : undefined
+        };
+        byKey.set(refKey(normalized), normalized);
+    }
+    return [...byKey.values()].sort((a, b) => refKey(a).localeCompare(refKey(b)));
+}
+function byKind(entries, kind) {
+    return entries.filter((entry) => entry.kind === kind);
+}
+export function sortEntries(entries) {
+    return [...entries].sort((a, b) => b.updatedAt.localeCompare(a.updatedAt) || a.kind.localeCompare(b.kind) || a.key.localeCompare(b.key) || a.id.localeCompare(b.id));
+}
+export function isSessionMemoryStore(value, sessionId) {
+    if (!value || typeof value !== "object") {
+        return false;
+    }
+    const record = value;
+    return (record.schemaVersion === 1 &&
+        record.sessionId === sessionId &&
+        record.repoRoot === "." &&
+        Array.isArray(record.entries) &&
+        record.entries.every(isSessionMemoryEntry) &&
+        typeof record.revision === "number");
+}
+export function isSessionMemoryEvent(value, sessionId) {
+    if (!value || typeof value !== "object") {
+        return false;
+    }
+    const record = value;
+    return (record.schemaVersion === 1 &&
+        record.sessionId === sessionId &&
+        (record.event === "record" || record.event === "compact") &&
+        Array.isArray(record.entries) &&
+        record.entries.every(isSessionMemoryEntry) &&
+        typeof record.revision === "number");
+}
+function isSessionMemoryEntry(value) {
+    if (!isRecord(value)) {
+        return false;
+    }
+    return (typeof value.id === "string" &&
+        value.type === "SessionMemoryEntry" &&
+        typeof value.source === "string" &&
+        isConfidence(value.confidence) &&
+        typeof value.snapshotId === "string" &&
+        typeof value.indexedAt === "string" &&
+        typeof value.sessionId === "string" &&
+        isSessionMemoryKind(value.kind) &&
+        typeof value.key === "string" &&
+        typeof value.summary === "string" &&
+        isSessionMemoryProvenance(value.provenance) &&
+        isSessionMemoryStatus(value.status) &&
+        isEvidenceTier(value.evidenceTier) &&
+        isSessionMemoryScope(value.scope) &&
+        Array.isArray(value.evidence) &&
+        value.evidence.every(isSessionMemoryEvidence) &&
+        typeof value.createdAt === "string" &&
+        typeof value.updatedAt === "string" &&
+        Array.isArray(value.supersedes) &&
+        value.supersedes.every((entry) => typeof entry === "string") &&
+        Array.isArray(value.staleBecause) &&
+        value.staleBecause.every((entry) => typeof entry === "string"));
+}
+function isSessionMemoryScope(value) {
+    return (isRecord(value) &&
+        stringArray(value.files) &&
+        stringArray(value.symbols) &&
+        stringArray(value.tests) &&
+        stringArray(value.workflows) &&
+        stringArray(value.topics) &&
+        Array.isArray(value.refs) &&
+        value.refs.every(isSessionMemoryRef));
+}
+function isSessionMemoryRef(value) {
+    return isRecord(value) && typeof value.kind === "string" && typeof value.id === "string" && isEvidenceTier(value.evidenceTier) && isConfidence(value.confidence);
+}
+function isSessionMemoryEvidence(value) {
+    return (isRecord(value) &&
+        typeof value.id === "string" &&
+        isSessionMemoryProvenance(value.provenance) &&
+        typeof value.source === "string" &&
+        typeof value.sourceRef === "string" &&
+        isEvidenceTier(value.evidenceTier) &&
+        isConfidence(value.confidence) &&
+        typeof value.snapshotId === "string" &&
+        typeof value.indexedAt === "string" &&
+        (typeof value.headCommit === "string" || value.headCommit === null));
+}
+function isSessionMemoryKind(value) {
+    return typeof value === "string" && ["viewed", "claim", "ruled_out", "open_question", "next_read", "decision", "verification", "risk", "constraint"].includes(value);
+}
+function isSessionMemoryProvenance(value) {
+    return typeof value === "string" && ["codexa-derived", "agent-asserted", "user-asserted"].includes(value);
+}
+function isSessionMemoryStatus(value) {
+    return typeof value === "string" && ["active", "stale", "superseded", "rejected", "resolved"].includes(value);
+}
+function isEvidenceTier(value) {
+    return typeof value === "string" && ["authoritative", "derived", "heuristic", "fallback"].includes(value);
+}
+function isConfidence(value) {
+    return typeof value === "string" && ["authoritative", "derived", "heuristic"].includes(value);
+}
+function stringArray(value) {
+    return Array.isArray(value) && value.every((entry) => typeof entry === "string");
+}
+export function normalizeIdentifier(value) {
+    const normalized = value
+        ?.trim()
+        .replace(/[^A-Za-z0-9._:-]+/gu, "-")
+        .replace(/^-+|-+$/gu, "")
+        .slice(0, 120);
+    return normalized || undefined;
+}
+function normalizeMemoryKey(value) {
+    const normalized = value
+        ?.trim()
+        .replace(/\s+/gu, " ")
+        .replace(/[^A-Za-z0-9._:/ -]+/gu, "")
+        .slice(0, 160);
+    return normalized || undefined;
+}
+export function normalizeText(value, limit) {
+    const normalized = value?.replace(/\s+/gu, " ").trim();
+    return normalized ? clampText(normalized, limit) : undefined;
+}
+function clampText(value, limit) {
+    const cleaned = value.replace(/\s+/gu, " ").trim();
+    return cleaned.length > limit ? `${cleaned.slice(0, Math.max(0, limit - 3))}...` : cleaned;
+}
+export function positiveInt(value, fallback) {
+    return Number.isFinite(value) && value !== undefined && value > 0 ? Math.trunc(value) : fallback;
+}
+function confidenceScore(value) {
+    return value === "authoritative" ? 0 : value === "derived" ? 1 : 2;
+}
+function evidenceTierScore(value) {
+    return value === "authoritative" ? 0 : value === "derived" ? 1 : value === "heuristic" ? 2 : 3;
+}
+export function sha1(value) {
+    return createHash("sha1").update(value).digest("hex");
+}
+function isRecord(value) {
+    return Boolean(value && typeof value === "object" && !Array.isArray(value));
+}
+const refFileKinds = new Set(["file", "test", "endpoint", "workflow", "outcome", "snapshot"]);
+//# sourceMappingURL=store.js.map

package/dist/session-memory/store.js.map

@@ -0,0 +1 @@
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package/dist/session-memory.d.ts

@@ -0,0 +1 @@
+export * from "./session-memory/runtime.js";

package/dist/session-memory.js

@@ -0,0 +1,2 @@
+export * from "./session-memory/runtime.js";
+//# sourceMappingURL=session-memory.js.map

package/dist/session-memory.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"session-memory.js","sourceRoot":"","sources":["../src/session-memory.ts"],"names":[],"mappings":"AAAA,cAAc,6BAA6B,CAAC"}

package/dist/static-analysis.d.ts

@@ -0,0 +1,36 @@
+import type { CodexaIndex } from "./types.js";
+export interface StaticAnalysisOptions {
+    semgrepReports?: string[];
+    codeqlReports?: string[];
+    sarifReports?: string[];
+    genericReports?: string[];
+    symbolReports?: string[];
+    runSemgrep?: boolean;
+    semgrepConfigs?: string[];
+    runCodeql?: boolean;
+    codeqlLanguages?: string[];
+    codeqlSuite?: string;
+    runShellcheck?: boolean;
+    timeoutMs?: number;
+    index?: boolean;
+}
+export interface StaticAnalysisReport {
+    kind: "semgrep" | "codeql" | "sarif" | "generic" | "shellcheck" | "symbol-report";
+    source: string;
+    path: string;
+    copied: boolean;
+}
+export interface StaticAnalysisRun {
+    tool: "semgrep" | "codeql" | "shellcheck";
+    command: string;
+    reports: string[];
+}
+export interface StaticAnalysisSummary {
+    repoRoot: string;
+    reports: StaticAnalysisReport[];
+    runs: StaticAnalysisRun[];
+    staticRiskCount: number;
+    index?: CodexaIndex;
+    text: string;
+}
+export declare function updateStaticAnalysisReports(repoInput: string, options?: StaticAnalysisOptions): Promise<StaticAnalysisSummary>;