@mat3ra/esse 2024.3.20-0 → 2024.3.25-0

package/lib/js/schema/property/source.json

@@ -1,286 +0,0 @@
-{
-    "$id": "property/source",
-    "$schema": "http://json-schema.org/draft-07/schema#",
-    "title": "The source of a property. This could be an article, a simulation on Exabyte, an external simulation, etc.",
-    "type": "object",
-    "properties": {
-        "type": {
-            "description": "Type of the material property's source.",
-            "type": "string"
-        },
-        "url": {
-            "description": "Internet address of the reference.",
-            "type": "string"
-        },
-        "info": {
-            "oneOf": [
-                {
-                    "$schema": "http://json-schema.org/draft-07/schema#",
-                    "type": "object",
-                    "properties": {
-                        "materialId": {
-                            "description": "Material's identity. Used for protoProperties.",
-                            "type": "string"
-                        },
-                        "jobId": {
-                            "description": "Job's identity",
-                            "type": "string"
-                        },
-                        "unitId": {
-                            "description": "Id of the unit that extracted the result",
-                            "type": "string"
-                        }
-                    }
-                },
-                {
-                    "$schema": "http://json-schema.org/draft-07/schema#",
-                    "title": "info for characteristic obtained by experiment",
-                    "type": "object",
-                    "properties": {
-                        "type": {
-                            "enum": [
-                                "experiment"
-                            ]
-                        },
-                        "authors": {
-                            "description": "experiment authors",
-                            "type": "array",
-                            "items": {
-                                "$schema": "http://json-schema.org/draft-07/schema#",
-                                "title": "experiment author schema",
-                                "type": "object",
-                                "required": [
-                                    "first",
-                                    "last"
-                                ],
-                                "properties": {
-                                    "first": {
-                                        "type": "string"
-                                    },
-                                    "middle": {
-                                        "type": "string"
-                                    },
-                                    "last": {
-                                        "type": "string"
-                                    },
-                                    "affiliation": {
-                                        "type": "string"
-                                    }
-                                }
-                            }
-                        },
-                        "title": {
-                            "type": "string",
-                            "description": "experiment title"
-                        },
-                        "method": {
-                            "type": "string",
-                            "description": "method used in experiment"
-                        },
-                        "conditions": {
-                            "type": "array",
-                            "items": {
-                                "$schema": "http://json-schema.org/draft-07/schema#",
-                                "title": "condition schema",
-                                "type": "object",
-                                "required": [
-                                    "name"
-                                ],
-                                "properties": {
-                                    "units": {
-                                        "description": "condition unit",
-                                        "type": "string"
-                                    },
-                                    "scalar": {
-                                        "description": "array of condition values",
-                                        "type": "array",
-                                        "items": {
-                                            "type": "object",
-                                            "properties": {
-                                                "value": {
-                                                    "type": "string"
-                                                }
-                                            }
-                                        }
-                                    },
-                                    "name": {
-                                        "description": "human-readable name of the condition",
-                                        "type": "string"
-                                    }
-                                }
-                            }
-                        },
-                        "location": {
-                            "$schema": "http://json-schema.org/draft-07/schema#",
-                            "title": "location schema",
-                            "type": "object",
-                            "required": [
-                                "latitude",
-                                "longitude"
-                            ],
-                            "properties": {
-                                "latitude": {
-                                    "description": "location latitude",
-                                    "type": "number"
-                                },
-                                "longitude": {
-                                    "description": "location longitude",
-                                    "type": "number"
-                                }
-                            }
-                        },
-                        "timestamp": {
-                            "description": "epoch time.",
-                            "type": "number"
-                        },
-                        "note": {
-                            "description": "Note about experiment",
-                            "type": "string"
-                        },
-                        "references": {
-                            "type": "array",
-                            "description": "references to literature articles",
-                            "items": {
-                                "$schema": "http://json-schema.org/draft-07/schema#",
-                                "title": "literature reference schema",
-                                "type": "object",
-                                "properties": {
-                                    "type": {
-                                        "enum": [
-                                            "literature"
-                                        ]
-                                    },
-                                    "doi": {
-                                        "type": "string",
-                                        "description": "Digital Object Identifier of the reference."
-                                    },
-                                    "isbn": {
-                                        "type": "string",
-                                        "description": "International Standard Book Number of the reference."
-                                    },
-                                    "issn": {
-                                        "type": "string",
-                                        "description": "International Standard Serial Number of the reference."
-                                    },
-                                    "url": {
-                                        "type": "string",
-                                        "description": "Internet address of the reference."
-                                    },
-                                    "title": {
-                                        "type": "string",
-                                        "description": "Title of the work."
-                                    },
-                                    "publisher": {
-                                        "type": "string",
-                                        "description": "Publisher of the work."
-                                    },
-                                    "journal": {
-                                        "type": "string",
-                                        "description": "Journal in which the work appeared."
-                                    },
-                                    "volume": {
-                                        "type": "string",
-                                        "description": "Volume of the series in which the work appeared."
-                                    },
-                                    "year": {
-                                        "type": "string",
-                                        "description": "Year in which the reference was published."
-                                    },
-                                    "issue": {
-                                        "type": "string",
-                                        "description": "Issue of the collection in which the work appeared."
-                                    },
-                                    "pages": {
-                                        "type": "object",
-                                        "description": "Start and end pages of the work.",
-                                        "$schema": "http://json-schema.org/draft-07/schema#",
-                                        "title": "pages schema",
-                                        "required": [
-                                            "start"
-                                        ],
-                                        "properties": {
-                                            "start": {
-                                                "type": "string"
-                                            },
-                                            "end": {
-                                                "type": "string"
-                                            }
-                                        }
-                                    },
-                                    "authors": {
-                                        "type": "array",
-                                        "description": "List of authors of the work.",
-                                        "items": {
-                                            "$schema": "http://json-schema.org/draft-07/schema#",
-                                            "title": "experiment author schema",
-                                            "type": "object",
-                                            "required": [
-                                                "first",
-                                                "last"
-                                            ],
-                                            "properties": {
-                                                "first": {
-                                                    "type": "string"
-                                                },
-                                                "middle": {
-                                                    "type": "string"
-                                                },
-                                                "last": {
-                                                    "type": "string"
-                                                },
-                                                "affiliation": {
-                                                    "type": "string"
-                                                }
-                                            }
-                                        }
-                                    },
-                                    "editors": {
-                                        "type": "array",
-                                        "description": "List of editors of the work.",
-                                        "items": {
-                                            "$schema": "http://json-schema.org/draft-07/schema#",
-                                            "title": "experiment author schema",
-                                            "type": "object",
-                                            "required": [
-                                                "first",
-                                                "last"
-                                            ],
-                                            "properties": {
-                                                "first": {
-                                                    "type": "string"
-                                                },
-                                                "middle": {
-                                                    "type": "string"
-                                                },
-                                                "last": {
-                                                    "type": "string"
-                                                },
-                                                "affiliation": {
-                                                    "type": "string"
-                                                }
-                                            }
-                                        }
-                                    },
-                                    "reference": {
-                                        "type": "array",
-                                        "description": "References cited by the work. Reference objects can nest as deeply as needed. This is useful, for example, when tracking the history of a value referenced in a scholarly article; the top level reference would contain information about where the data was accessed while the nested reference would contain information about where it was originally published.",
-                                        "items": {
-                                            "type": "object"
-                                        }
-                                    }
-                                }
-                            }
-                        }
-                    },
-                    "required": [
-                        "conditions",
-                        "authors",
-                        "title",
-                        "method",
-                        "timestamp"
-                    ]
-                }
-            ]
-        }
-    }
-}

package/lib/js/schema/software/application.json

@@ -1,99 +0,0 @@
-{
-    "$id": "software/application",
-    "$schema": "http://json-schema.org/draft-07/schema#",
-    "title": "application schema (base)",
-    "type": "object",
-    "additionalProperties": true,
-    "properties": {
-        "shortName": {
-            "description": "The short name of the application. e.g. qe",
-            "type": "string"
-        },
-        "summary": {
-            "description": "Application's short description.",
-            "type": "string"
-        },
-        "version": {
-            "description": "Application version. e.g. 5.3.5",
-            "type": "string"
-        },
-        "build": {
-            "description": "Application build. e.g. VTST",
-            "type": "string"
-        },
-        "hasAdvancedComputeOptions": {
-            "description": "Whether advanced compute options are present",
-            "type": "boolean"
-        },
-        "isLicensed": {
-            "description": "Whether licensing is present",
-            "type": "boolean"
-        },
-        "_id": {
-            "description": "entity identity",
-            "type": "string"
-        },
-        "slug": {
-            "description": "entity slug",
-            "type": "string"
-        },
-        "systemName": {
-            "type": "string"
-        },
-        "consistencyChecks": {
-            "type": "array",
-            "items": {
-                "$schema": "http://json-schema.org/draft-07/schema#",
-                "title": "consistency check",
-                "type": "object",
-                "description": "The output of consistency checks performed on data adhering to JSON schema, but inconsistent with scientific or logical rules, to show problems in UI.",
-                "required": [
-                    "key",
-                    "name",
-                    "severity",
-                    "message"
-                ],
-                "properties": {
-                    "key": {
-                        "type": "string",
-                        "description": "Key of the property of the entity on which the consistency check is performed in Mongo dot notation, e.g. 'basis.coordinates.1'"
-                    },
-                    "name": {
-                        "enum": [
-                            "default",
-                            "atomsTooClose",
-                            "atomsOverlap"
-                        ],
-                        "description": "Name of the consistency check that is performed, which is listed in an enum."
-                    },
-                    "severity": {
-                        "enum": [
-                            "info",
-                            "warning",
-                            "error"
-                        ],
-                        "description": "Severity level of the problem, which is used in UI to differentiate."
-                    },
-                    "message": {
-                        "type": "string",
-                        "description": "Message generated by the consistency check describing the problem."
-                    }
-                }
-            }
-        },
-        "schemaVersion": {
-            "description": "entity's schema version. Used to distinct between different schemas.",
-            "type": "string",
-            "default": "2022.8.16"
-        },
-        "name": {
-            "description": "entity name",
-            "type": "string"
-        },
-        "isDefault": {
-            "description": "Identifies that entity is defaultable",
-            "type": "boolean",
-            "default": false
-        }
-    }
-}

package/lib/js/schema/software/executable.json

@@ -1,208 +0,0 @@
-{
-    "$id": "software/executable",
-    "$schema": "http://json-schema.org/draft-07/schema#",
-    "title": "executable schema",
-    "type": "object",
-    "required": [
-        "name"
-    ],
-    "properties": {
-        "name": {
-            "description": "The name of the executable. e.g. pw.x",
-            "type": "string"
-        },
-        "applicationId": {
-            "description": "_ids of the application this executable belongs to",
-            "type": "array",
-            "items": {
-                "type": "string"
-            }
-        },
-        "hasAdvancedComputeOptions": {
-            "description": "Whether advanced compute options are present",
-            "type": "boolean"
-        },
-        "_id": {
-            "description": "entity identity",
-            "type": "string"
-        },
-        "slug": {
-            "description": "entity slug",
-            "type": "string"
-        },
-        "systemName": {
-            "type": "string"
-        },
-        "consistencyChecks": {
-            "type": "array",
-            "items": {
-                "$schema": "http://json-schema.org/draft-07/schema#",
-                "title": "consistency check",
-                "type": "object",
-                "description": "The output of consistency checks performed on data adhering to JSON schema, but inconsistent with scientific or logical rules, to show problems in UI.",
-                "required": [
-                    "key",
-                    "name",
-                    "severity",
-                    "message"
-                ],
-                "properties": {
-                    "key": {
-                        "type": "string",
-                        "description": "Key of the property of the entity on which the consistency check is performed in Mongo dot notation, e.g. 'basis.coordinates.1'"
-                    },
-                    "name": {
-                        "enum": [
-                            "default",
-                            "atomsTooClose",
-                            "atomsOverlap"
-                        ],
-                        "description": "Name of the consistency check that is performed, which is listed in an enum."
-                    },
-                    "severity": {
-                        "enum": [
-                            "info",
-                            "warning",
-                            "error"
-                        ],
-                        "description": "Severity level of the problem, which is used in UI to differentiate."
-                    },
-                    "message": {
-                        "type": "string",
-                        "description": "Message generated by the consistency check describing the problem."
-                    }
-                }
-            }
-        },
-        "schemaVersion": {
-            "description": "entity's schema version. Used to distinct between different schemas.",
-            "type": "string",
-            "default": "2022.8.16"
-        },
-        "isDefault": {
-            "description": "Identifies that entity is defaultable",
-            "type": "boolean",
-            "default": false
-        },
-        "preProcessors": {
-            "description": "names of the pre-processors for this calculation",
-            "type": "array",
-            "items": {
-                "$schema": "http://json-schema.org/draft-07/schema#",
-                "title": "runtime item schema",
-                "oneOf": [
-                    {
-                        "$schema": "http://json-schema.org/draft-07/schema#",
-                        "title": "name result schema",
-                        "type": "object",
-                        "properties": {
-                            "name": {
-                                "description": "The name of this item. e.g. scf_accuracy",
-                                "type": "string"
-                            }
-                        },
-                        "required": [
-                            "name"
-                        ]
-                    },
-                    {
-                        "$schema": "http://json-schema.org/draft-07/schema#",
-                        "title": "RuntimeItemString",
-                        "description": "name of runtime item in shortened notation",
-                        "type": "string"
-                    }
-                ]
-            }
-        },
-        "postProcessors": {
-            "description": "names of the post-processors for this calculation",
-            "type": "array",
-            "items": {
-                "$schema": "http://json-schema.org/draft-07/schema#",
-                "title": "runtime item schema",
-                "oneOf": [
-                    {
-                        "$schema": "http://json-schema.org/draft-07/schema#",
-                        "title": "name result schema",
-                        "type": "object",
-                        "properties": {
-                            "name": {
-                                "description": "The name of this item. e.g. scf_accuracy",
-                                "type": "string"
-                            }
-                        },
-                        "required": [
-                            "name"
-                        ]
-                    },
-                    {
-                        "$schema": "http://json-schema.org/draft-07/schema#",
-                        "title": "RuntimeItemString",
-                        "description": "name of runtime item in shortened notation",
-                        "type": "string"
-                    }
-                ]
-            }
-        },
-        "monitors": {
-            "description": "names of the monitors for this calculation",
-            "type": "array",
-            "items": {
-                "$schema": "http://json-schema.org/draft-07/schema#",
-                "title": "runtime item schema",
-                "oneOf": [
-                    {
-                        "$schema": "http://json-schema.org/draft-07/schema#",
-                        "title": "name result schema",
-                        "type": "object",
-                        "properties": {
-                            "name": {
-                                "description": "The name of this item. e.g. scf_accuracy",
-                                "type": "string"
-                            }
-                        },
-                        "required": [
-                            "name"
-                        ]
-                    },
-                    {
-                        "$schema": "http://json-schema.org/draft-07/schema#",
-                        "title": "RuntimeItemString",
-                        "description": "name of runtime item in shortened notation",
-                        "type": "string"
-                    }
-                ]
-            }
-        },
-        "results": {
-            "description": "names of the results for this calculation",
-            "type": "array",
-            "items": {
-                "$schema": "http://json-schema.org/draft-07/schema#",
-                "title": "runtime item schema",
-                "oneOf": [
-                    {
-                        "$schema": "http://json-schema.org/draft-07/schema#",
-                        "title": "name result schema",
-                        "type": "object",
-                        "properties": {
-                            "name": {
-                                "description": "The name of this item. e.g. scf_accuracy",
-                                "type": "string"
-                            }
-                        },
-                        "required": [
-                            "name"
-                        ]
-                    },
-                    {
-                        "$schema": "http://json-schema.org/draft-07/schema#",
-                        "title": "RuntimeItemString",
-                        "description": "name of runtime item in shortened notation",
-                        "type": "string"
-                    }
-                ]
-            }
-        }
-    }
-}