@mat3ra/esse 2024.3.20-0 → 2024.3.25-0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (596) hide show
  1. package/.eslintrc.json +1 -1
  2. package/{build_schemas.js → build_schemas.ts} +3 -2
  3. package/compile_ts.ts +1 -1
  4. package/{lib → dist}/js/esse/utils.js +1 -0
  5. package/{lib → dist}/js/utils/ajv.js +4 -0
  6. package/package.json +31 -25
  7. package/schema/system/timestampable.json +2 -16
  8. package/src/js/esse/utils.ts +1 -0
  9. package/src/js/utils/ajv.ts +5 -1
  10. package/tsconfig-transpile.json +3 -0
  11. package/tsconfig.json +1 -32
  12. package/lib/js/example/3pse/db/nist_jarvis/2024.3.13/db_entry.json +0 -91
  13. package/lib/js/example/3pse/file/applications/espresso/7.2/pw.x.json +0 -94
  14. package/lib/js/example/core/abstract/2d_data.json +0 -19
  15. package/lib/js/example/core/abstract/2d_plot.json +0 -26
  16. package/lib/js/example/core/abstract/3d_grid.json +0 -12
  17. package/lib/js/example/core/abstract/3d_tensor.json +0 -17
  18. package/lib/js/example/core/abstract/3d_vector_basis.json +0 -17
  19. package/lib/js/example/core/abstract/point.json +0 -5
  20. package/lib/js/example/core/abstract/vector.json +0 -5
  21. package/lib/js/example/core/primitive/1d_data_series.json +0 -12
  22. package/lib/js/example/core/primitive/3d_lattice.json +0 -8
  23. package/lib/js/example/core/primitive/array_of_3_booleans.json +0 -5
  24. package/lib/js/example/core/primitive/array_of_3_numbers.json +0 -5
  25. package/lib/js/example/core/primitive/array_of_ids.json +0 -8
  26. package/lib/js/example/core/primitive/axis.json +0 -4
  27. package/lib/js/example/core/primitive/scalar.json +0 -3
  28. package/lib/js/example/core/primitive/string.json +0 -3
  29. package/lib/js/example/core/reference/experiment/condition.json +0 -12
  30. package/lib/js/example/core/reference/experiment/location.json +0 -4
  31. package/lib/js/example/core/reference/experiment.json +0 -38
  32. package/lib/js/example/core/reference/literature/name.json +0 -5
  33. package/lib/js/example/core/reference/literature/pages.json +0 -4
  34. package/lib/js/example/core/reference/literature.json +0 -10
  35. package/lib/js/example/core/reference/modeling/exabyte.json +0 -9
  36. package/lib/js/example/core/reference/modeling.json +0 -9
  37. package/lib/js/example/core/reference.json +0 -9
  38. package/lib/js/example/core/reusable/atomic_vectors.json +0 -18
  39. package/lib/js/example/core/reusable/band_gap.json +0 -16
  40. package/lib/js/example/core/reusable/energy.json +0 -5
  41. package/lib/js/example/core/reusable/file_metadata.json +0 -5
  42. package/lib/js/example/core/reusable/object_storage_container_data.json +0 -8
  43. package/lib/js/example/element.json +0 -17
  44. package/lib/js/example/job/compute.json +0 -26
  45. package/lib/js/example/job.json +0 -183
  46. package/lib/js/example/material.json +0 -128
  47. package/lib/js/example/method/categorized_method.json +0 -47
  48. package/lib/js/example/method/method_parameters.json +0 -3
  49. package/lib/js/example/method.json +0 -7
  50. package/lib/js/example/methods_directory/legacy/localorbital.json +0 -4
  51. package/lib/js/example/methods_directory/legacy/pseudopotential.json +0 -4
  52. package/lib/js/example/methods_directory/legacy/regression.json +0 -61
  53. package/lib/js/example/methods_directory/legacy/unknown.json +0 -4
  54. package/lib/js/example/methods_directory/mathematical/cg.json +0 -10
  55. package/lib/js/example/methods_directory/mathematical/regression.json +0 -65
  56. package/lib/js/example/methods_directory/physical/ao/dunning.json +0 -13
  57. package/lib/js/example/methods_directory/physical/psp/file.json +0 -54
  58. package/lib/js/example/methods_directory/physical/psp.json +0 -67
  59. package/lib/js/example/methods_directory/physical/pw.json +0 -9
  60. package/lib/js/example/methods_directory/physical/smearing.json +0 -10
  61. package/lib/js/example/methods_directory/physical/tetrahedron.json +0 -10
  62. package/lib/js/example/model/categorized_model.json +0 -77
  63. package/lib/js/example/model/model_parameters.json +0 -7
  64. package/lib/js/example/model.json +0 -11
  65. package/lib/js/example/models_category/pb/qm/abin/gw.json +0 -7
  66. package/lib/js/example/models_category/pb/qm/dft/ksdft.json +0 -6
  67. package/lib/js/example/models_category/pb/qm/semp.json +0 -5
  68. package/lib/js/example/models_directory/gga.json +0 -15
  69. package/lib/js/example/models_directory/gw.json +0 -15
  70. package/lib/js/example/models_directory/hybrid.json +0 -15
  71. package/lib/js/example/models_directory/lda.json +0 -15
  72. package/lib/js/example/models_directory/legacy/dft.json +0 -12
  73. package/lib/js/example/models_directory/legacy/ml.json +0 -11
  74. package/lib/js/example/models_directory/legacy/unknown.json +0 -11
  75. package/lib/js/example/models_directory/re.json +0 -10
  76. package/lib/js/example/project.json +0 -25
  77. package/lib/js/example/properties_directory/electronic_configuration.json +0 -4
  78. package/lib/js/example/properties_directory/elemental/atomic_radius.json +0 -4
  79. package/lib/js/example/properties_directory/elemental/electronegativity.json +0 -4
  80. package/lib/js/example/properties_directory/elemental/ionization_potential.json +0 -4
  81. package/lib/js/example/properties_directory/non_scalar/band_gaps.json +0 -25
  82. package/lib/js/example/properties_directory/non_scalar/band_structure.json +0 -47
  83. package/lib/js/example/properties_directory/non_scalar/charge_density_profile.json +0 -22
  84. package/lib/js/example/properties_directory/non_scalar/density_of_states.json +0 -55
  85. package/lib/js/example/properties_directory/non_scalar/dielectric_tensor.json +0 -133
  86. package/lib/js/example/properties_directory/non_scalar/file_content.json +0 -13
  87. package/lib/js/example/properties_directory/non_scalar/hubbard_u.json +0 -24
  88. package/lib/js/example/properties_directory/non_scalar/hubbard_v.json +0 -22
  89. package/lib/js/example/properties_directory/non_scalar/hubbard_v_nn.json +0 -24
  90. package/lib/js/example/properties_directory/non_scalar/phonon_dispersions.json +0 -41
  91. package/lib/js/example/properties_directory/non_scalar/phonon_dos.json +0 -37
  92. package/lib/js/example/properties_directory/non_scalar/potential_profile.json +0 -32
  93. package/lib/js/example/properties_directory/non_scalar/reaction_energy_profile.json +0 -30
  94. package/lib/js/example/properties_directory/non_scalar/stress_tensor.json +0 -21
  95. package/lib/js/example/properties_directory/non_scalar/total_energy_contributions.json +0 -44
  96. package/lib/js/example/properties_directory/non_scalar/vibrational_spectrum.json +0 -25
  97. package/lib/js/example/properties_directory/scalar/electron_affinity.json +0 -5
  98. package/lib/js/example/properties_directory/scalar/fermi_energy.json +0 -5
  99. package/lib/js/example/properties_directory/scalar/formation_energy.json +0 -5
  100. package/lib/js/example/properties_directory/scalar/ionization_potential.json +0 -5
  101. package/lib/js/example/properties_directory/scalar/pressure.json +0 -5
  102. package/lib/js/example/properties_directory/scalar/reaction_energy_barrier.json +0 -5
  103. package/lib/js/example/properties_directory/scalar/surface_energy.json +0 -5
  104. package/lib/js/example/properties_directory/scalar/total_energy.json +0 -5
  105. package/lib/js/example/properties_directory/scalar/total_force.json +0 -5
  106. package/lib/js/example/properties_directory/scalar/valence_band_offset.json +0 -5
  107. package/lib/js/example/properties_directory/scalar/zero_point_energy.json +0 -5
  108. package/lib/js/example/properties_directory/structural/atomic_forces.json +0 -22
  109. package/lib/js/example/properties_directory/structural/basis/atomic_constraints.json +0 -21
  110. package/lib/js/example/properties_directory/structural/basis/atomic_coordinate.json +0 -8
  111. package/lib/js/example/properties_directory/structural/basis/atomic_coordinates.json +0 -21
  112. package/lib/js/example/properties_directory/structural/basis/atomic_element.json +0 -4
  113. package/lib/js/example/properties_directory/structural/basis/bonds.json +0 -24
  114. package/lib/js/example/properties_directory/structural/basis.json +0 -46
  115. package/lib/js/example/properties_directory/structural/density.json +0 -5
  116. package/lib/js/example/properties_directory/structural/elemental_ratio.json +0 -5
  117. package/lib/js/example/properties_directory/structural/inchi.json +0 -4
  118. package/lib/js/example/properties_directory/structural/inchi_key.json +0 -4
  119. package/lib/js/example/properties_directory/structural/lattice/lattice_bravais.json +0 -13
  120. package/lib/js/example/properties_directory/structural/lattice/lattice_vectors.json +0 -19
  121. package/lib/js/example/properties_directory/structural/lattice.json +0 -33
  122. package/lib/js/example/properties_directory/structural/magnetic_moments.json +0 -22
  123. package/lib/js/example/properties_directory/structural/molecular_pattern.json +0 -71
  124. package/lib/js/example/properties_directory/structural/p_norm.json +0 -5
  125. package/lib/js/example/properties_directory/structural/symmetry.json +0 -9
  126. package/lib/js/example/properties_directory/structural/volume.json +0 -5
  127. package/lib/js/example/properties_directory/workflow/convergence/electronic.json +0 -15
  128. package/lib/js/example/properties_directory/workflow/convergence/ionic.json +0 -20
  129. package/lib/js/example/properties_directory/workflow/convergence/kpoint.json +0 -22
  130. package/lib/js/example/property/base.json +0 -31
  131. package/lib/js/example/software/application.json +0 -7
  132. package/lib/js/example/software/executable.json +0 -20
  133. package/lib/js/example/software/flavor.json +0 -9
  134. package/lib/js/example/software/template.json +0 -14
  135. package/lib/js/example/software_directory/ml/exabyteml.json +0 -6
  136. package/lib/js/example/software_directory/ml/unit/execution/evaluate/cross_validate.json +0 -20
  137. package/lib/js/example/software_directory/ml/unit/execution/initialize.json +0 -23
  138. package/lib/js/example/software_directory/ml/unit/execution/score.json +0 -18
  139. package/lib/js/example/software_directory/ml/unit/execution/train.json +0 -29
  140. package/lib/js/example/software_directory/ml/unit/processing/data_transformation/manipulation.json +0 -14
  141. package/lib/js/example/software_directory/ml/unit/processing/data_transformation/scale_and_reduce.json +0 -26
  142. package/lib/js/example/software_directory/ml/unit/processing/feature_selection/filter_based.json +0 -13
  143. package/lib/js/example/software_directory/modeling/espresso/arguments.json +0 -5
  144. package/lib/js/example/software_directory/modeling/espresso.json +0 -6
  145. package/lib/js/example/software_directory/modeling/nwchem.json +0 -6
  146. package/lib/js/example/software_directory/modeling/unit/execution.json +0 -19
  147. package/lib/js/example/software_directory/modeling/vasp.json +0 -6
  148. package/lib/js/example/software_directory/scripting/jupyter_lab.json +0 -8
  149. package/lib/js/example/software_directory/scripting/python.json +0 -8
  150. package/lib/js/example/software_directory/scripting/shell.json +0 -8
  151. package/lib/js/example/software_directory/scripting/unit/execution.json +0 -22
  152. package/lib/js/example/system/_material.json +0 -5
  153. package/lib/js/example/system/_parent_job.json +0 -5
  154. package/lib/js/example/system/_project.json +0 -5
  155. package/lib/js/example/system/consistency_check.json +0 -6
  156. package/lib/js/example/system/creator.json +0 -5
  157. package/lib/js/example/system/entity_reference.json +0 -5
  158. package/lib/js/example/system/file_source.json +0 -6
  159. package/lib/js/example/system/iframe_message.json +0 -9
  160. package/lib/js/example/system/message.json +0 -16
  161. package/lib/js/example/system/owner.json +0 -5
  162. package/lib/js/example/workflow/subworkflow.json +0 -93
  163. package/lib/js/example/workflow/unit/assignment.json +0 -19
  164. package/lib/js/example/workflow/unit/condition.json +0 -22
  165. package/lib/js/example/workflow/unit/execution.json +0 -66
  166. package/lib/js/example/workflow/unit/input/_inputItemScope.json +0 -4
  167. package/lib/js/example/workflow/unit/io/api.json +0 -31
  168. package/lib/js/example/workflow/unit/io/db.json +0 -15
  169. package/lib/js/example/workflow/unit/io/object_storage.json +0 -12
  170. package/lib/js/example/workflow/unit/io.json +0 -41
  171. package/lib/js/example/workflow/unit/map.json +0 -16
  172. package/lib/js/example/workflow/unit/processing.json +0 -13
  173. package/lib/js/example/workflow/unit/reduce.json +0 -16
  174. package/lib/js/example/workflow/unit/runtime/runtime_items.json +0 -14
  175. package/lib/js/example/workflow.json +0 -129
  176. package/lib/js/schema/3pse/db/nist_jarvis/2024.3.13/atoms.json +0 -79
  177. package/lib/js/schema/3pse/db/nist_jarvis/2024.3.13/db_entry.json +0 -91
  178. package/lib/js/schema/3pse/file/applications/espresso/7.2/pw.x/atomic_positions.json +0 -72
  179. package/lib/js/schema/3pse/file/applications/espresso/7.2/pw.x/atomic_species.json +0 -30
  180. package/lib/js/schema/3pse/file/applications/espresso/7.2/pw.x/cell.json +0 -89
  181. package/lib/js/schema/3pse/file/applications/espresso/7.2/pw.x/cell_parameters.json +0 -54
  182. package/lib/js/schema/3pse/file/applications/espresso/7.2/pw.x/control.json +0 -181
  183. package/lib/js/schema/3pse/file/applications/espresso/7.2/pw.x/electrons.json +0 -163
  184. package/lib/js/schema/3pse/file/applications/espresso/7.2/pw.x/hubbard.json +0 -219
  185. package/lib/js/schema/3pse/file/applications/espresso/7.2/pw.x/ions.json +0 -216
  186. package/lib/js/schema/3pse/file/applications/espresso/7.2/pw.x/k_points.json +0 -87
  187. package/lib/js/schema/3pse/file/applications/espresso/7.2/pw.x/system.json +0 -652
  188. package/lib/js/schema/3pse/file/applications/espresso/7.2/pw.x.json +0 -1776
  189. package/lib/js/schema/core/abstract/2d_data.json +0 -31
  190. package/lib/js/schema/core/abstract/2d_plot.json +0 -74
  191. package/lib/js/schema/core/abstract/3d_grid.json +0 -32
  192. package/lib/js/schema/core/abstract/3d_tensor.json +0 -18
  193. package/lib/js/schema/core/abstract/3d_vector_basis.json +0 -43
  194. package/lib/js/schema/core/abstract/point.json +0 -11
  195. package/lib/js/schema/core/abstract/vector.json +0 -27
  196. package/lib/js/schema/core/primitive/1d_data_series.json +0 -16
  197. package/lib/js/schema/core/primitive/3d_lattice.json +0 -40
  198. package/lib/js/schema/core/primitive/array_of_3_booleans.json +0 -11
  199. package/lib/js/schema/core/primitive/array_of_3_numbers.json +0 -11
  200. package/lib/js/schema/core/primitive/array_of_ids.json +0 -16
  201. package/lib/js/schema/core/primitive/array_of_strings.json +0 -11
  202. package/lib/js/schema/core/primitive/axis.json +0 -19
  203. package/lib/js/schema/core/primitive/group_info.json +0 -16
  204. package/lib/js/schema/core/primitive/integer_one_or_zero.json +0 -8
  205. package/lib/js/schema/core/primitive/linked_list/base_node.json +0 -36
  206. package/lib/js/schema/core/primitive/linked_list/named_node.json +0 -40
  207. package/lib/js/schema/core/primitive/linked_list/named_node_in_group.json +0 -48
  208. package/lib/js/schema/core/primitive/linked_list/node_with_type.json +0 -39
  209. package/lib/js/schema/core/primitive/linked_list.json +0 -171
  210. package/lib/js/schema/core/primitive/scalar.json +0 -14
  211. package/lib/js/schema/core/primitive/slugified_entry.json +0 -21
  212. package/lib/js/schema/core/primitive/slugified_entry_or_slug.json +0 -31
  213. package/lib/js/schema/core/primitive/string.json +0 -14
  214. package/lib/js/schema/core/reference/exabyte.json +0 -19
  215. package/lib/js/schema/core/reference/experiment/condition.json +0 -31
  216. package/lib/js/schema/core/reference/experiment/location.json +0 -20
  217. package/lib/js/schema/core/reference/experiment.json +0 -249
  218. package/lib/js/schema/core/reference/literature/name.json +0 -24
  219. package/lib/js/schema/core/reference/literature/pages.json +0 -17
  220. package/lib/js/schema/core/reference/literature.json +0 -131
  221. package/lib/js/schema/core/reference/modeling/exabyte.json +0 -46
  222. package/lib/js/schema/core/reference/modeling.json +0 -52
  223. package/lib/js/schema/core/reference.json +0 -436
  224. package/lib/js/schema/core/reusable/atomic_data/per_orbital.json +0 -22
  225. package/lib/js/schema/core/reusable/atomic_data/per_orbital_pair.json +0 -39
  226. package/lib/js/schema/core/reusable/atomic_data/value_number.json +0 -13
  227. package/lib/js/schema/core/reusable/atomic_data/value_string.json +0 -13
  228. package/lib/js/schema/core/reusable/atomic_data_per_orbital_numeric.json +0 -26
  229. package/lib/js/schema/core/reusable/atomic_data_per_orbital_pair_numeric.json +0 -43
  230. package/lib/js/schema/core/reusable/atomic_orbital.json +0 -32
  231. package/lib/js/schema/core/reusable/atomic_scalars.json +0 -29
  232. package/lib/js/schema/core/reusable/atomic_strings.json +0 -19
  233. package/lib/js/schema/core/reusable/atomic_vectors.json +0 -42
  234. package/lib/js/schema/core/reusable/band_gap.json +0 -64
  235. package/lib/js/schema/core/reusable/categories.json +0 -159
  236. package/lib/js/schema/core/reusable/category_path.json +0 -7
  237. package/lib/js/schema/core/reusable/dielectric_tensor_component.json +0 -46
  238. package/lib/js/schema/core/reusable/energy.json +0 -39
  239. package/lib/js/schema/core/reusable/file_metadata.json +0 -21
  240. package/lib/js/schema/core/reusable/frequency_function_matrix.json +0 -30
  241. package/lib/js/schema/core/reusable/object_storage_container_data.json +0 -32
  242. package/lib/js/schema/definitions/units.json +0 -103
  243. package/lib/js/schema/element.json +0 -103
  244. package/lib/js/schema/in_memory_entity/base.json +0 -65
  245. package/lib/js/schema/in_memory_entity/defaultable.json +0 -70
  246. package/lib/js/schema/in_memory_entity/named.json +0 -69
  247. package/lib/js/schema/in_memory_entity/named_defaultable.json +0 -74
  248. package/lib/js/schema/in_memory_entity/named_defaultable_has_metadata.json +0 -77
  249. package/lib/js/schema/in_memory_entity/named_defaultable_runtime_items.json +0 -194
  250. package/lib/js/schema/job/base.json +0 -378
  251. package/lib/js/schema/job/compute.json +0 -178
  252. package/lib/js/schema/job.json +0 -6866
  253. package/lib/js/schema/material/conventional.json +0 -11
  254. package/lib/js/schema/material.json +0 -645
  255. package/lib/js/schema/method/categorized_method.json +0 -221
  256. package/lib/js/schema/method/method_parameters.json +0 -47
  257. package/lib/js/schema/method/unit_method.json +0 -191
  258. package/lib/js/schema/method.json +0 -28
  259. package/lib/js/schema/methods_category/mathematical/diff/enum_options.json +0 -8
  260. package/lib/js/schema/methods_category/mathematical/diff/fd.json +0 -165
  261. package/lib/js/schema/methods_category/mathematical/diff.json +0 -162
  262. package/lib/js/schema/methods_category/mathematical/discr/enum_options.json +0 -8
  263. package/lib/js/schema/methods_category/mathematical/discr/mesh/enum_options.json +0 -18
  264. package/lib/js/schema/methods_category/mathematical/discr/mesh/hybrid.json +0 -168
  265. package/lib/js/schema/methods_category/mathematical/discr/mesh/nstruct.json +0 -168
  266. package/lib/js/schema/methods_category/mathematical/discr/mesh/struct/cartesian.json +0 -171
  267. package/lib/js/schema/methods_category/mathematical/discr/mesh/struct/enum_options.json +0 -8
  268. package/lib/js/schema/methods_category/mathematical/discr/mesh/struct.json +0 -168
  269. package/lib/js/schema/methods_category/mathematical/discr/mesh.json +0 -165
  270. package/lib/js/schema/methods_category/mathematical/discr.json +0 -162
  271. package/lib/js/schema/methods_category/mathematical/enum_options.json +0 -45
  272. package/lib/js/schema/methods_category/mathematical/fapprx/basisexp.json +0 -165
  273. package/lib/js/schema/methods_category/mathematical/fapprx/enum_options.json +0 -13
  274. package/lib/js/schema/methods_category/mathematical/fapprx/ipol/enum_options.json +0 -18
  275. package/lib/js/schema/methods_category/mathematical/fapprx/ipol/lin.json +0 -168
  276. package/lib/js/schema/methods_category/mathematical/fapprx/ipol/poly.json +0 -168
  277. package/lib/js/schema/methods_category/mathematical/fapprx/ipol/spline.json +0 -168
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  279. package/lib/js/schema/methods_category/mathematical/fapprx.json +0 -162
  280. package/lib/js/schema/methods_category/mathematical/intgr/analytic/enum_options.json +0 -20
  281. package/lib/js/schema/methods_category/mathematical/intgr/analytic/volume.json +0 -178
  282. package/lib/js/schema/methods_category/mathematical/intgr/analytic.json +0 -165
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  564. package/lib/js/schema/workflow/unit/subworkflow.json +0 -267
  565. package/lib/js/schema/workflow/unit.json +0 -3289
  566. package/lib/js/schema/workflow.json +0 -6488
  567. package/lib/js/schemas.json +0 -1
  568. package/modules.d.ts +0 -5
  569. /package/{lib → dist}/js/esse/JSONSchemasGenerator.d.ts +0 -0
  570. /package/{lib → dist}/js/esse/JSONSchemasGenerator.js +0 -0
  571. /package/{lib → dist}/js/esse/JSONSchemasInterface.d.ts +0 -0
  572. /package/{lib → dist}/js/esse/JSONSchemasInterface.js +0 -0
  573. /package/{lib → dist}/js/esse/JSONSchemasInterfaceServer.d.ts +0 -0
  574. /package/{lib → dist}/js/esse/JSONSchemasInterfaceServer.js +0 -0
  575. /package/{lib → dist}/js/esse/schemaUtils.d.ts +0 -0
  576. /package/{lib → dist}/js/esse/schemaUtils.js +0 -0
  577. /package/{lib → dist}/js/esse/settings.d.ts +0 -0
  578. /package/{lib → dist}/js/esse/settings.js +0 -0
  579. /package/{lib → dist}/js/esse/types.d.ts +0 -0
  580. /package/{lib → dist}/js/esse/types.js +0 -0
  581. /package/{lib → dist}/js/esse/utils.d.ts +0 -0
  582. /package/{lib → dist}/js/json_include/index.d.ts +0 -0
  583. /package/{lib → dist}/js/json_include/index.js +0 -0
  584. /package/{lib → dist}/js/json_include/settings.d.ts +0 -0
  585. /package/{lib → dist}/js/json_include/settings.js +0 -0
  586. /package/{lib → dist}/js/scripts/compileTs.d.ts +0 -0
  587. /package/{lib → dist}/js/scripts/compileTs.js +0 -0
  588. /package/{lib → dist}/js/scripts/createEnumsFromYaml.d.ts +0 -0
  589. /package/{lib → dist}/js/scripts/createEnumsFromYaml.js +0 -0
  590. /package/{lib → dist}/js/scripts/setSchemaIds.d.ts +0 -0
  591. /package/{lib → dist}/js/scripts/setSchemaIds.js +0 -0
  592. /package/{lib → dist}/js/utils/ajv.d.ts +0 -0
  593. /package/{lib → dist}/js/utils/common.d.ts +0 -0
  594. /package/{lib → dist}/js/utils/common.js +0 -0
  595. /package/{lib → dist}/js/utils/filesystem.d.ts +0 -0
  596. /package/{lib → dist}/js/utils/filesystem.js +0 -0
@@ -1,22 +0,0 @@
1
- {
2
- "$id": "model/mixins/enum-options",
3
- "spinPolarization": {
4
- "enum": [
5
- "collinear",
6
- "non-collinear"
7
- ]
8
- },
9
- "dispersionCorrection": {
10
- "enum": [
11
- "dft-d2",
12
- "dft-d3",
13
- "xdm",
14
- "ts"
15
- ]
16
- },
17
- "hubbardType": {
18
- "enum": [
19
- "u"
20
- ]
21
- }
22
- }
@@ -1,13 +0,0 @@
1
- {
2
- "$id": "model/mixins/hubbard",
3
- "$schema": "http://json-schema.org/draft-07/schema#",
4
- "title": "Hubbard model mixin",
5
- "type": "object",
6
- "properties": {
7
- "hubbardType": {
8
- "enum": [
9
- "u"
10
- ]
11
- }
12
- }
13
- }
@@ -1,12 +0,0 @@
1
- {
2
- "$id": "model/mixins/spin-orbit-coupling",
3
- "$schema": "http://json-schema.org/draft-07/schema#",
4
- "title": "Spin-orbit coupling mixin",
5
- "type": "object",
6
- "additionalProperties": true,
7
- "properties": {
8
- "spinOrbitCoupling": {
9
- "type": "boolean"
10
- }
11
- }
12
- }
@@ -1,15 +0,0 @@
1
- {
2
- "$id": "model/mixins/spin-polarization",
3
- "$schema": "http://json-schema.org/draft-07/schema#",
4
- "title": "Spin-polarization mixin",
5
- "type": "object",
6
- "additionalProperties": true,
7
- "properties": {
8
- "spinPolarization": {
9
- "enum": [
10
- "collinear",
11
- "non-collinear"
12
- ]
13
- }
14
- }
15
- }
@@ -1,98 +0,0 @@
1
- {
2
- "$id": "model/model-parameters",
3
- "$schema": "http://json-schema.org/draft-07/schema#",
4
- "title": "ModelParameters",
5
- "type": "object",
6
- "oneOf": [
7
- {
8
- "$schema": "http://json-schema.org/draft-07/schema#",
9
- "title": "LDA functional mixin",
10
- "type": "object",
11
- "properties": {
12
- "functional": {
13
- "enum": [
14
- "pz"
15
- ]
16
- }
17
- },
18
- "additionalProperties": true
19
- },
20
- {
21
- "$schema": "http://json-schema.org/draft-07/schema#",
22
- "title": "GGA functional mixin",
23
- "type": "object",
24
- "properties": {
25
- "functional": {
26
- "enum": [
27
- "pbe",
28
- "pbesol"
29
- ]
30
- }
31
- },
32
- "additionalProperties": true
33
- },
34
- {
35
- "$schema": "http://json-schema.org/draft-07/schema#",
36
- "title": "Meta-GGA functional mixin",
37
- "type": "object",
38
- "properties": {
39
- "functional": {
40
- "enum": [
41
- "scan"
42
- ]
43
- }
44
- },
45
- "additionalProperties": true
46
- },
47
- {
48
- "$schema": "http://json-schema.org/draft-07/schema#",
49
- "title": "Hybrid functional mixin",
50
- "type": "object",
51
- "properties": {
52
- "functional": {
53
- "enum": [
54
- "hse06",
55
- "b3lyp"
56
- ]
57
- }
58
- }
59
- },
60
- {
61
- "$schema": "http://json-schema.org/draft-07/schema#",
62
- "title": "Double hybrid functional mixin",
63
- "type": "object",
64
- "properties": {
65
- "functional": {
66
- "enum": [
67
- "b2plyp"
68
- ]
69
- }
70
- }
71
- }
72
- ],
73
- "additionalProperties": true,
74
- "properties": {
75
- "hubbardType": {
76
- "enum": [
77
- "u"
78
- ]
79
- },
80
- "spinPolarization": {
81
- "enum": [
82
- "collinear",
83
- "non-collinear"
84
- ]
85
- },
86
- "spinOrbitCoupling": {
87
- "type": "boolean"
88
- },
89
- "dispersionCorrection": {
90
- "enum": [
91
- "dft-d2",
92
- "dft-d3",
93
- "xdm",
94
- "ts"
95
- ]
96
- }
97
- }
98
- }
@@ -1,321 +0,0 @@
1
- {
2
- "$id": "model/model-without-method",
3
- "$schema": "http://json-schema.org/draft-07/schema#",
4
- "title": "model without method schema (base)",
5
- "type": "object",
6
- "required": [
7
- "categories",
8
- "parameters"
9
- ],
10
- "properties": {
11
- "categories": {
12
- "$schema": "http://json-schema.org/draft-07/schema#",
13
- "title": "Reusable categories schema",
14
- "description": "Used to categorize entities such as models and methods",
15
- "type": "object",
16
- "properties": {
17
- "tier1": {
18
- "$schema": "http://json-schema.org/draft-07/schema#",
19
- "title": "slugified entry or slug",
20
- "description": "contains either object with slugified entry or slug only as a string",
21
- "oneOf": [
22
- {
23
- "$schema": "http://json-schema.org/draft-07/schema#",
24
- "title": "slugified entry",
25
- "description": "container for machine- and human-readable identifier",
26
- "type": "object",
27
- "properties": {
28
- "name": {
29
- "description": "descriptive human-readable name of entry",
30
- "type": "string"
31
- },
32
- "slug": {
33
- "description": "machine-readable identifier",
34
- "type": "string"
35
- }
36
- },
37
- "required": [
38
- "name",
39
- "slug"
40
- ]
41
- },
42
- {
43
- "type": "string"
44
- }
45
- ]
46
- },
47
- "tier2": {
48
- "$schema": "http://json-schema.org/draft-07/schema#",
49
- "title": "slugified entry or slug",
50
- "description": "contains either object with slugified entry or slug only as a string",
51
- "oneOf": [
52
- {
53
- "$schema": "http://json-schema.org/draft-07/schema#",
54
- "title": "slugified entry",
55
- "description": "container for machine- and human-readable identifier",
56
- "type": "object",
57
- "properties": {
58
- "name": {
59
- "description": "descriptive human-readable name of entry",
60
- "type": "string"
61
- },
62
- "slug": {
63
- "description": "machine-readable identifier",
64
- "type": "string"
65
- }
66
- },
67
- "required": [
68
- "name",
69
- "slug"
70
- ]
71
- },
72
- {
73
- "type": "string"
74
- }
75
- ]
76
- },
77
- "tier3": {
78
- "$schema": "http://json-schema.org/draft-07/schema#",
79
- "title": "slugified entry or slug",
80
- "description": "contains either object with slugified entry or slug only as a string",
81
- "oneOf": [
82
- {
83
- "$schema": "http://json-schema.org/draft-07/schema#",
84
- "title": "slugified entry",
85
- "description": "container for machine- and human-readable identifier",
86
- "type": "object",
87
- "properties": {
88
- "name": {
89
- "description": "descriptive human-readable name of entry",
90
- "type": "string"
91
- },
92
- "slug": {
93
- "description": "machine-readable identifier",
94
- "type": "string"
95
- }
96
- },
97
- "required": [
98
- "name",
99
- "slug"
100
- ]
101
- },
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- {
103
- "type": "string"
104
- }
105
- ]
106
- },
107
- "type": {
108
- "$schema": "http://json-schema.org/draft-07/schema#",
109
- "title": "slugified entry or slug",
110
- "description": "contains either object with slugified entry or slug only as a string",
111
- "oneOf": [
112
- {
113
- "$schema": "http://json-schema.org/draft-07/schema#",
114
- "title": "slugified entry",
115
- "description": "container for machine- and human-readable identifier",
116
- "type": "object",
117
- "properties": {
118
- "name": {
119
- "description": "descriptive human-readable name of entry",
120
- "type": "string"
121
- },
122
- "slug": {
123
- "description": "machine-readable identifier",
124
- "type": "string"
125
- }
126
- },
127
- "required": [
128
- "name",
129
- "slug"
130
- ]
131
- },
132
- {
133
- "type": "string"
134
- }
135
- ]
136
- },
137
- "subtype": {
138
- "$schema": "http://json-schema.org/draft-07/schema#",
139
- "title": "slugified entry or slug",
140
- "description": "contains either object with slugified entry or slug only as a string",
141
- "oneOf": [
142
- {
143
- "$schema": "http://json-schema.org/draft-07/schema#",
144
- "title": "slugified entry",
145
- "description": "container for machine- and human-readable identifier",
146
- "type": "object",
147
- "properties": {
148
- "name": {
149
- "description": "descriptive human-readable name of entry",
150
- "type": "string"
151
- },
152
- "slug": {
153
- "description": "machine-readable identifier",
154
- "type": "string"
155
- }
156
- },
157
- "required": [
158
- "name",
159
- "slug"
160
- ]
161
- },
162
- {
163
- "type": "string"
164
- }
165
- ]
166
- }
167
- }
168
- },
169
- "parameters": {
170
- "type": "object",
171
- "description": "Model parameters defined in-place or via model mixins"
172
- },
173
- "reference": {
174
- "$schema": "http://json-schema.org/draft-07/schema#",
175
- "title": "literature reference schema",
176
- "type": "object",
177
- "properties": {
178
- "type": {
179
- "enum": [
180
- "literature"
181
- ]
182
- },
183
- "doi": {
184
- "type": "string",
185
- "description": "Digital Object Identifier of the reference."
186
- },
187
- "isbn": {
188
- "type": "string",
189
- "description": "International Standard Book Number of the reference."
190
- },
191
- "issn": {
192
- "type": "string",
193
- "description": "International Standard Serial Number of the reference."
194
- },
195
- "url": {
196
- "type": "string",
197
- "description": "Internet address of the reference."
198
- },
199
- "title": {
200
- "type": "string",
201
- "description": "Title of the work."
202
- },
203
- "publisher": {
204
- "type": "string",
205
- "description": "Publisher of the work."
206
- },
207
- "journal": {
208
- "type": "string",
209
- "description": "Journal in which the work appeared."
210
- },
211
- "volume": {
212
- "type": "string",
213
- "description": "Volume of the series in which the work appeared."
214
- },
215
- "year": {
216
- "type": "string",
217
- "description": "Year in which the reference was published."
218
- },
219
- "issue": {
220
- "type": "string",
221
- "description": "Issue of the collection in which the work appeared."
222
- },
223
- "pages": {
224
- "type": "object",
225
- "description": "Start and end pages of the work.",
226
- "$schema": "http://json-schema.org/draft-07/schema#",
227
- "title": "pages schema",
228
- "required": [
229
- "start"
230
- ],
231
- "properties": {
232
- "start": {
233
- "type": "string"
234
- },
235
- "end": {
236
- "type": "string"
237
- }
238
- }
239
- },
240
- "authors": {
241
- "type": "array",
242
- "description": "List of authors of the work.",
243
- "items": {
244
- "$schema": "http://json-schema.org/draft-07/schema#",
245
- "title": "experiment author schema",
246
- "type": "object",
247
- "required": [
248
- "first",
249
- "last"
250
- ],
251
- "properties": {
252
- "first": {
253
- "type": "string"
254
- },
255
- "middle": {
256
- "type": "string"
257
- },
258
- "last": {
259
- "type": "string"
260
- },
261
- "affiliation": {
262
- "type": "string"
263
- }
264
- }
265
- }
266
- },
267
- "editors": {
268
- "type": "array",
269
- "description": "List of editors of the work.",
270
- "items": {
271
- "$schema": "http://json-schema.org/draft-07/schema#",
272
- "title": "experiment author schema",
273
- "type": "object",
274
- "required": [
275
- "first",
276
- "last"
277
- ],
278
- "properties": {
279
- "first": {
280
- "type": "string"
281
- },
282
- "middle": {
283
- "type": "string"
284
- },
285
- "last": {
286
- "type": "string"
287
- },
288
- "affiliation": {
289
- "type": "string"
290
- }
291
- }
292
- }
293
- },
294
- "reference": {
295
- "type": "array",
296
- "description": "References cited by the work. Reference objects can nest as deeply as needed. This is useful, for example, when tracking the history of a value referenced in a scholarly article; the top level reference would contain information about where the data was accessed while the nested reference would contain information about where it was originally published.",
297
- "items": {
298
- "type": "object"
299
- }
300
- }
301
- }
302
- },
303
- "name": {
304
- "description": "entity name",
305
- "type": "string"
306
- },
307
- "path": {
308
- "$schema": "http://json-schema.org/draft-07/schema#",
309
- "title": "category path schema",
310
- "description": "TODO: Use regex once schema draft version has been updated",
311
- "type": "string"
312
- },
313
- "tags": {
314
- "description": "entity tags",
315
- "type": "array",
316
- "items": {
317
- "type": "string"
318
- }
319
- }
320
- }
321
- }
@@ -1,49 +0,0 @@
1
- {
2
- "$id": "model",
3
- "$schema": "http://json-schema.org/draft-07/schema#",
4
- "title": "base model",
5
- "type": "object",
6
- "required": [
7
- "type",
8
- "subtype",
9
- "method"
10
- ],
11
- "additionalProperties": true,
12
- "properties": {
13
- "type": {
14
- "description": "general type of the model, eg. `dft`",
15
- "type": "string"
16
- },
17
- "subtype": {
18
- "description": "general subtype of the model, eg. `lda`",
19
- "type": "string"
20
- },
21
- "method": {
22
- "$schema": "http://json-schema.org/draft-07/schema#",
23
- "title": "base method",
24
- "type": "object",
25
- "required": [
26
- "type",
27
- "subtype"
28
- ],
29
- "properties": {
30
- "type": {
31
- "description": "general type of this method, eg. `pseudopotential`",
32
- "type": "string"
33
- },
34
- "subtype": {
35
- "description": "general subtype of this method, eg. `ultra-soft`",
36
- "type": "string"
37
- },
38
- "precision": {
39
- "description": "Object showing the actual possible precision based on theory and implementation",
40
- "type": "object"
41
- },
42
- "data": {
43
- "description": "additional data specific to method, eg. array of pseudopotentials",
44
- "type": "object"
45
- }
46
- }
47
- }
48
- }
49
- }
@@ -1,13 +0,0 @@
1
- {
2
- "$id": "models-category/enum-options",
3
- "physicsBased": {
4
- "enum": [
5
- "pb"
6
- ]
7
- },
8
- "statistical": {
9
- "enum": [
10
- "st"
11
- ]
12
- }
13
- }
@@ -1,8 +0,0 @@
1
- {
2
- "$id": "models-category/pb/enum-options",
3
- "quantumMechanical": {
4
- "enum": [
5
- "qm"
6
- ]
7
- }
8
- }
@@ -1,15 +0,0 @@
1
- {
2
- "$id": "models-category/pb/qm/abin/enum-options",
3
- "gwApproximation": {
4
- "enum": [
5
- "gw"
6
- ]
7
- },
8
- "gwSubtypes": {
9
- "enum": [
10
- "g0w0",
11
- "evgw0",
12
- "evgw"
13
- ]
14
- }
15
- }