@jbrowse/plugin-wiggle 2.4.1 → 2.5.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (129) hide show
  1. package/dist/BigWigAdapter/BigWigAdapter.d.ts +2 -2
  2. package/dist/BigWigAdapter/BigWigAdapter.js +2 -2
  3. package/dist/BigWigAdapter/BigWigAdapter.js.map +1 -1
  4. package/dist/BigWigAdapter/configSchema.d.ts +20 -1
  5. package/dist/CreateMultiWiggleExtension/ConfirmDialog.d.ts +0 -1
  6. package/dist/DensityRenderer/configSchema.d.ts +33 -1
  7. package/dist/LinePlotRenderer/configSchema.d.ts +44 -1
  8. package/dist/LinearWiggleDisplay/components/SetColorDialog.d.ts +0 -1
  9. package/dist/LinearWiggleDisplay/components/WiggleDisplayComponent.d.ts +0 -1
  10. package/dist/LinearWiggleDisplay/models/configSchema.d.ts +98 -1
  11. package/dist/LinearWiggleDisplay/models/model.d.ts +93 -58
  12. package/dist/LinearWiggleDisplay/models/model.js +8 -25
  13. package/dist/LinearWiggleDisplay/models/model.js.map +1 -1
  14. package/dist/MultiDensityRenderer/configSchema.d.ts +33 -1
  15. package/dist/MultiLineRenderer/configSchema.d.ts +51 -1
  16. package/dist/MultiLinearWiggleDisplay/components/DraggableDialog.d.ts +0 -1
  17. package/dist/MultiLinearWiggleDisplay/components/SetColorDialog.d.ts +0 -1
  18. package/dist/MultiLinearWiggleDisplay/components/SetColorDialog.js +36 -37
  19. package/dist/MultiLinearWiggleDisplay/components/SetColorDialog.js.map +1 -1
  20. package/dist/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.d.ts +0 -1
  21. package/dist/MultiLinearWiggleDisplay/models/configSchema.d.ts +107 -1
  22. package/dist/MultiLinearWiggleDisplay/models/model.d.ts +62 -23
  23. package/dist/MultiLinearWiggleDisplay/models/model.js +3 -19
  24. package/dist/MultiLinearWiggleDisplay/models/model.js.map +1 -1
  25. package/dist/MultiQuantitativeTrack/configSchema.d.ts +73 -1
  26. package/dist/MultiRowLineRenderer/configSchema.d.ts +51 -1
  27. package/dist/MultiRowXYPlotRenderer/configSchema.d.ts +68 -1
  28. package/dist/MultiWiggleAdapter/MultiWiggleAdapter.d.ts +1 -1
  29. package/dist/MultiWiggleAdapter/MultiWiggleAdapter.js +2 -2
  30. package/dist/MultiWiggleAdapter/MultiWiggleAdapter.js.map +1 -1
  31. package/dist/MultiWiggleAdapter/configSchema.d.ts +18 -1
  32. package/dist/MultiWiggleAddTrackWidget/AddTrackWorkflow.d.ts +0 -1
  33. package/dist/MultiWiggleRendering.d.ts +0 -1
  34. package/dist/MultiXYPlotRenderer/configSchema.d.ts +65 -1
  35. package/dist/QuantitativeTrack/configSchema.d.ts +73 -1
  36. package/dist/WiggleRPC/MultiWiggleGetSources.d.ts +21 -0
  37. package/dist/WiggleRPC/MultiWiggleGetSources.js +51 -0
  38. package/dist/WiggleRPC/MultiWiggleGetSources.js.map +1 -0
  39. package/dist/WiggleRPC/WiggleGetGlobalQuantitativeStats.d.ts +14 -0
  40. package/dist/WiggleRPC/WiggleGetGlobalQuantitativeStats.js +37 -0
  41. package/dist/WiggleRPC/WiggleGetGlobalQuantitativeStats.js.map +1 -0
  42. package/dist/WiggleRPC/WiggleGetMultiRegionQuantitativeStats.d.ts +20 -0
  43. package/dist/WiggleRPC/WiggleGetMultiRegionQuantitativeStats.js +54 -0
  44. package/dist/WiggleRPC/WiggleGetMultiRegionQuantitativeStats.js.map +1 -0
  45. package/dist/WiggleRPC/rpcMethods.d.ts +3 -47
  46. package/dist/WiggleRPC/rpcMethods.js +16 -117
  47. package/dist/WiggleRPC/rpcMethods.js.map +1 -1
  48. package/dist/WiggleRendering.d.ts +0 -1
  49. package/dist/XYPlotRenderer/configSchema.d.ts +65 -1
  50. package/dist/configSchema.d.ts +51 -1
  51. package/dist/index.d.ts +156 -47
  52. package/dist/index.js +2 -2
  53. package/dist/index.js.map +1 -1
  54. package/dist/shared/SetMinMaxDialog.d.ts +0 -1
  55. package/dist/shared/YScaleBar.d.ts +0 -1
  56. package/dist/util.d.ts +9 -6
  57. package/dist/util.js +13 -12
  58. package/dist/util.js.map +1 -1
  59. package/esm/BigWigAdapter/BigWigAdapter.d.ts +2 -2
  60. package/esm/BigWigAdapter/BigWigAdapter.js +4 -3
  61. package/esm/BigWigAdapter/BigWigAdapter.js.map +1 -1
  62. package/esm/BigWigAdapter/configSchema.d.ts +20 -1
  63. package/esm/CreateMultiWiggleExtension/ConfirmDialog.d.ts +0 -1
  64. package/esm/DensityRenderer/configSchema.d.ts +33 -1
  65. package/esm/LinePlotRenderer/configSchema.d.ts +44 -1
  66. package/esm/LinearWiggleDisplay/components/SetColorDialog.d.ts +0 -1
  67. package/esm/LinearWiggleDisplay/components/WiggleDisplayComponent.d.ts +0 -1
  68. package/esm/LinearWiggleDisplay/models/configSchema.d.ts +98 -1
  69. package/esm/LinearWiggleDisplay/models/model.d.ts +93 -58
  70. package/esm/LinearWiggleDisplay/models/model.js +10 -27
  71. package/esm/LinearWiggleDisplay/models/model.js.map +1 -1
  72. package/esm/MultiDensityRenderer/configSchema.d.ts +33 -1
  73. package/esm/MultiLineRenderer/configSchema.d.ts +51 -1
  74. package/esm/MultiLinearWiggleDisplay/components/DraggableDialog.d.ts +0 -1
  75. package/esm/MultiLinearWiggleDisplay/components/SetColorDialog.d.ts +0 -1
  76. package/esm/MultiLinearWiggleDisplay/components/SetColorDialog.js +36 -37
  77. package/esm/MultiLinearWiggleDisplay/components/SetColorDialog.js.map +1 -1
  78. package/esm/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.d.ts +0 -1
  79. package/esm/MultiLinearWiggleDisplay/models/configSchema.d.ts +107 -1
  80. package/esm/MultiLinearWiggleDisplay/models/model.d.ts +62 -23
  81. package/esm/MultiLinearWiggleDisplay/models/model.js +4 -20
  82. package/esm/MultiLinearWiggleDisplay/models/model.js.map +1 -1
  83. package/esm/MultiQuantitativeTrack/configSchema.d.ts +73 -1
  84. package/esm/MultiRowLineRenderer/configSchema.d.ts +51 -1
  85. package/esm/MultiRowXYPlotRenderer/configSchema.d.ts +68 -1
  86. package/esm/MultiWiggleAdapter/MultiWiggleAdapter.d.ts +1 -1
  87. package/esm/MultiWiggleAdapter/MultiWiggleAdapter.js +3 -2
  88. package/esm/MultiWiggleAdapter/MultiWiggleAdapter.js.map +1 -1
  89. package/esm/MultiWiggleAdapter/configSchema.d.ts +18 -1
  90. package/esm/MultiWiggleAddTrackWidget/AddTrackWorkflow.d.ts +0 -1
  91. package/esm/MultiWiggleRendering.d.ts +0 -1
  92. package/esm/MultiXYPlotRenderer/configSchema.d.ts +65 -1
  93. package/esm/QuantitativeTrack/configSchema.d.ts +73 -1
  94. package/esm/WiggleRPC/MultiWiggleGetSources.d.ts +21 -0
  95. package/esm/WiggleRPC/MultiWiggleGetSources.js +44 -0
  96. package/esm/WiggleRPC/MultiWiggleGetSources.js.map +1 -0
  97. package/esm/WiggleRPC/WiggleGetGlobalQuantitativeStats.d.ts +14 -0
  98. package/esm/WiggleRPC/WiggleGetGlobalQuantitativeStats.js +30 -0
  99. package/esm/WiggleRPC/WiggleGetGlobalQuantitativeStats.js.map +1 -0
  100. package/esm/WiggleRPC/WiggleGetMultiRegionQuantitativeStats.d.ts +20 -0
  101. package/esm/WiggleRPC/WiggleGetMultiRegionQuantitativeStats.js +47 -0
  102. package/esm/WiggleRPC/WiggleGetMultiRegionQuantitativeStats.js.map +1 -0
  103. package/esm/WiggleRPC/rpcMethods.d.ts +3 -47
  104. package/esm/WiggleRPC/rpcMethods.js +3 -111
  105. package/esm/WiggleRPC/rpcMethods.js.map +1 -1
  106. package/esm/WiggleRendering.d.ts +0 -1
  107. package/esm/XYPlotRenderer/configSchema.d.ts +65 -1
  108. package/esm/configSchema.d.ts +51 -1
  109. package/esm/index.d.ts +156 -47
  110. package/esm/index.js +3 -3
  111. package/esm/index.js.map +1 -1
  112. package/esm/shared/SetMinMaxDialog.d.ts +0 -1
  113. package/esm/shared/YScaleBar.d.ts +0 -1
  114. package/esm/util.d.ts +9 -6
  115. package/esm/util.js +10 -9
  116. package/esm/util.js.map +1 -1
  117. package/package.json +3 -3
  118. package/src/BigWigAdapter/BigWigAdapter.test.ts +8 -3
  119. package/src/BigWigAdapter/BigWigAdapter.ts +6 -3
  120. package/src/LinearWiggleDisplay/models/model.tsx +11 -29
  121. package/src/MultiLinearWiggleDisplay/components/SetColorDialog.tsx +53 -50
  122. package/src/MultiLinearWiggleDisplay/models/model.tsx +4 -20
  123. package/src/MultiWiggleAdapter/MultiWiggleAdapter.ts +1 -1
  124. package/src/WiggleRPC/MultiWiggleGetSources.ts +68 -0
  125. package/src/WiggleRPC/WiggleGetGlobalQuantitativeStats.ts +44 -0
  126. package/src/WiggleRPC/WiggleGetMultiRegionQuantitativeStats.ts +73 -0
  127. package/src/WiggleRPC/rpcMethods.ts +3 -170
  128. package/src/index.ts +4 -4
  129. package/src/util.ts +24 -17
@@ -15,9 +15,9 @@ export default class BigWigAdapter extends BaseFeatureDataAdapter {
15
15
  }>;
16
16
  getRefNames(opts?: BaseOptions): Promise<string[]>;
17
17
  refIdToName(refId: number): Promise<any>;
18
- getGlobalStats(opts?: BaseOptions): Promise<import("@jbrowse/core/util/stats").FeatureStats>;
18
+ getGlobalStats(opts?: BaseOptions): Promise<import("@jbrowse/core/util/stats").QuantitativeStats>;
19
19
  getFeatures(region: Region, opts?: WiggleOptions): import("rxjs").Observable<Feature>;
20
- estimateRegionsStats(_regions: Region[]): Promise<{
20
+ getMultiRegionFeatureDensityStats(_regions: Region[]): Promise<{
21
21
  featureDensity: number;
22
22
  }>;
23
23
  freeResources(): void;
@@ -69,15 +69,15 @@ class BigWigAdapter extends BaseAdapter_1.BaseFeatureDataAdapter {
69
69
  }, signal);
70
70
  }
71
71
  // always render bigwig instead of calculating a feature density for it
72
- async estimateRegionsStats(_regions) {
72
+ async getMultiRegionFeatureDensityStats(_regions) {
73
73
  return { featureDensity: 0 };
74
74
  }
75
75
  freeResources() { }
76
76
  }
77
- exports.default = BigWigAdapter;
78
77
  BigWigAdapter.capabilities = [
79
78
  'hasResolution',
80
79
  'hasLocalStats',
81
80
  'hasGlobalStats',
82
81
  ];
82
+ exports.default = BigWigAdapter;
83
83
  //# sourceMappingURL=BigWigAdapter.js.map
@@ -1 +1 @@
1
- {"version":3,"file":"BigWigAdapter.js","sourceRoot":"","sources":["../../src/BigWigAdapter/BigWigAdapter.ts"],"names":[],"mappings":";;AAAA,mCAAkC;AAClC,yEAGgD;AAEhD,8CAAoD;AACpD,6CAA0D;AAC1D,kDAA0D;AAC1D,oDAAgF;AAMhF,MAAqB,aAAc,SAAQ,oCAAsB;IAUvD,KAAK,CAAC,QAAQ,CAAC,IAAkB;QACvC,MAAM,EAAE,cAAc,GAAG,GAAG,EAAE,GAAE,CAAC,EAAE,GAAG,IAAI,IAAI,EAAE,CAAA;QAChD,MAAM,MAAM,GAAG,IAAI,YAAM,CAAC;YACxB,UAAU,EAAE,IAAA,iBAAY,EACtB,IAAI,CAAC,OAAO,CAAC,gBAAgB,CAAC,EAC9B,IAAI,CAAC,aAAa,CACnB;SACF,CAAC,CAAA;QACF,MAAM,MAAM,GAAG,MAAM,IAAA,mBAAY,EAC/B,2BAA2B,EAC3B,cAAc,EACd,GAAG,EAAE,CAAC,MAAM,CAAC,SAAS,CAAC,IAAI,CAAC,CAC7B,CAAA;QACD,OAAO,EAAE,MAAM,EAAE,MAAM,EAAE,CAAA;IAC3B,CAAC;IAED,KAAK,CAAC,KAAK,CAAC,IAAkB;QAC5B,IAAI,CAAC,IAAI,CAAC,MAAM,EAAE;YAChB,IAAI,CAAC,MAAM,GAAG,IAAI,CAAC,QAAQ,CAAC,IAAI,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,EAAE;gBAC1C,IAAI,CAAC,MAAM,GAAG,SAAS,CAAA;gBACvB,MAAM,CAAC,CAAA;YACT,CAAC,CAAC,CAAA;SACH;QACD,OAAO,IAAI,CAAC,MAAM,CAAA;IACpB,CAAC;IAEM,KAAK,CAAC,WAAW,CAAC,IAAkB;QACzC,MAAM,EAAE,MAAM,EAAE,GAAG,MAAM,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,CAAA;QACzC,OAAO,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,UAAU,CAAC,CAAA;IACvC,CAAC;IAEM,KAAK,CAAC,WAAW,CAAC,KAAa;;QACpC,MAAM,EAAE,MAAM,EAAE,GAAG,MAAM,IAAI,CAAC,KAAK,EAAE,CAAA;QACrC,OAAO,MAAA,MAAM,CAAC,YAAY,CAAC,KAAK,CAAC,0CAAE,IAAI,CAAA;IACzC,CAAC;IAEM,KAAK,CAAC,cAAc,CAAC,IAAkB;QAC5C,MAAM,EAAE,MAAM,EAAE,GAAG,MAAM,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,CAAA;QACzC,OAAO,IAAA,oBAAY,EAAC,MAAM,CAAC,YAAuC,CAAC,CAAA;IACrE,CAAC;IAEM,WAAW,CAAC,MAAc,EAAE,OAAsB,EAAE;QACzD,MAAM,EAAE,OAAO,EAAE,KAAK,EAAE,GAAG,EAAE,GAAG,MAAM,CAAA;QACtC,MAAM,EACJ,OAAO,GAAG,CAAC,EACX,MAAM,EACN,UAAU,GAAG,CAAC,EACd,cAAc,GAAG,GAAG,EAAE,GAAE,CAAC,GAC1B,GAAG,IAAI,CAAA;QACR,OAAO,IAAA,uBAAgB,EAAU,KAAK,EAAC,QAAQ,EAAC,EAAE;YAChD,cAAc,CAAC,yBAAyB,CAAC,CAAA;YACzC,MAAM,MAAM,GAAG,IAAI,CAAC,OAAO,CAAC,QAAQ,CAAC,CAAA;YACrC,MAAM,EAAE,MAAM,EAAE,GAAG,MAAM,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,CAAA;YACzC,MAAM,KAAK,GAAG,MAAM,MAAM,CAAC,WAAW,CAAC,OAAO,EAAE,KAAK,EAAE,GAAG,EAAE;gBAC1D,GAAG,IAAI;gBACP,YAAY,EAAE,OAAO,GAAG,UAAU;aACnC,CAAC,CAAA;YAEF,KAAK,MAAM,IAAI,IAAI,KAAK,EAAE;gBACxB,IAAI,MAAM,EAAE;oBACV,mBAAmB;oBACnB,IAAI,CAAC,MAAM,GAAG,MAAM,CAAA;iBACrB;gBACD,MAAM,QAAQ,GAAG,GAAG,MAAM,IAAI,MAAM,CAAC,OAAO,IAAI,IAAI,CAAC,KAAK,IAAI,IAAI,CAAC,GAAG,EAAE,CAAA;gBACxE,mBAAmB;gBACnB,IAAI,CAAC,OAAO,GAAG,OAAO,CAAA;gBACtB,IAAI,CAAC,QAAQ,GAAG,QAAQ,CAAA;gBACxB,QAAQ,CAAC,IAAI,CAAC;oBACZ,mBAAmB;oBACnB,GAAG,EAAE,CAAC,GAAW,EAAE,EAAE,CAAE,IAAgC,CAAC,GAAG,CAAC;oBAC5D,EAAE,EAAE,GAAG,EAAE,CAAC,QAAQ;oBAClB,mBAAmB;oBACnB,MAAM,EAAE,GAAG,EAAE,CAAC,IAAI;iBACnB,CAAC,CAAA;aACH;YACD,QAAQ,CAAC,QAAQ,EAAE,CAAA;QACrB,CAAC,EAAE,MAAM,CAAC,CAAA;IACZ,CAAC;IAED,uEAAuE;IACvE,KAAK,CAAC,oBAAoB,CAAC,QAAkB;QAC3C,OAAO,EAAE,cAAc,EAAE,CAAC,EAAE,CAAA;IAC9B,CAAC;IAEM,aAAa,KAAU,CAAC;;AA9FjC,gCA+FC;AA3Fe,0BAAY,GAAG;IAC3B,eAAe;IACf,eAAe;IACf,gBAAgB;CACjB,CAAA"}
1
+ {"version":3,"file":"BigWigAdapter.js","sourceRoot":"","sources":["../../src/BigWigAdapter/BigWigAdapter.ts"],"names":[],"mappings":";;AAAA,mCAAkC;AAClC,yEAGgD;AAEhD,8CAAoD;AACpD,6CAA0D;AAC1D,kDAA0D;AAC1D,oDAGiC;AAMjC,MAAqB,aAAc,SAAQ,oCAAsB;IAUvD,KAAK,CAAC,QAAQ,CAAC,IAAkB;QACvC,MAAM,EAAE,cAAc,GAAG,GAAG,EAAE,GAAE,CAAC,EAAE,GAAG,IAAI,IAAI,EAAE,CAAA;QAChD,MAAM,MAAM,GAAG,IAAI,YAAM,CAAC;YACxB,UAAU,EAAE,IAAA,iBAAY,EACtB,IAAI,CAAC,OAAO,CAAC,gBAAgB,CAAC,EAC9B,IAAI,CAAC,aAAa,CACnB;SACF,CAAC,CAAA;QACF,MAAM,MAAM,GAAG,MAAM,IAAA,mBAAY,EAC/B,2BAA2B,EAC3B,cAAc,EACd,GAAG,EAAE,CAAC,MAAM,CAAC,SAAS,CAAC,IAAI,CAAC,CAC7B,CAAA;QACD,OAAO,EAAE,MAAM,EAAE,MAAM,EAAE,CAAA;IAC3B,CAAC;IAED,KAAK,CAAC,KAAK,CAAC,IAAkB;QAC5B,IAAI,CAAC,IAAI,CAAC,MAAM,EAAE;YAChB,IAAI,CAAC,MAAM,GAAG,IAAI,CAAC,QAAQ,CAAC,IAAI,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,EAAE;gBAC1C,IAAI,CAAC,MAAM,GAAG,SAAS,CAAA;gBACvB,MAAM,CAAC,CAAA;YACT,CAAC,CAAC,CAAA;SACH;QACD,OAAO,IAAI,CAAC,MAAM,CAAA;IACpB,CAAC;IAEM,KAAK,CAAC,WAAW,CAAC,IAAkB;QACzC,MAAM,EAAE,MAAM,EAAE,GAAG,MAAM,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,CAAA;QACzC,OAAO,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,UAAU,CAAC,CAAA;IACvC,CAAC;IAEM,KAAK,CAAC,WAAW,CAAC,KAAa;;QACpC,MAAM,EAAE,MAAM,EAAE,GAAG,MAAM,IAAI,CAAC,KAAK,EAAE,CAAA;QACrC,OAAO,MAAA,MAAM,CAAC,YAAY,CAAC,KAAK,CAAC,0CAAE,IAAI,CAAA;IACzC,CAAC;IAEM,KAAK,CAAC,cAAc,CAAC,IAAkB;QAC5C,MAAM,EAAE,MAAM,EAAE,GAAG,MAAM,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,CAAA;QACzC,OAAO,IAAA,oBAAY,EAAC,MAAM,CAAC,YAA4C,CAAC,CAAA;IAC1E,CAAC;IAEM,WAAW,CAAC,MAAc,EAAE,OAAsB,EAAE;QACzD,MAAM,EAAE,OAAO,EAAE,KAAK,EAAE,GAAG,EAAE,GAAG,MAAM,CAAA;QACtC,MAAM,EACJ,OAAO,GAAG,CAAC,EACX,MAAM,EACN,UAAU,GAAG,CAAC,EACd,cAAc,GAAG,GAAG,EAAE,GAAE,CAAC,GAC1B,GAAG,IAAI,CAAA;QACR,OAAO,IAAA,uBAAgB,EAAU,KAAK,EAAC,QAAQ,EAAC,EAAE;YAChD,cAAc,CAAC,yBAAyB,CAAC,CAAA;YACzC,MAAM,MAAM,GAAG,IAAI,CAAC,OAAO,CAAC,QAAQ,CAAC,CAAA;YACrC,MAAM,EAAE,MAAM,EAAE,GAAG,MAAM,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,CAAA;YACzC,MAAM,KAAK,GAAG,MAAM,MAAM,CAAC,WAAW,CAAC,OAAO,EAAE,KAAK,EAAE,GAAG,EAAE;gBAC1D,GAAG,IAAI;gBACP,YAAY,EAAE,OAAO,GAAG,UAAU;aACnC,CAAC,CAAA;YAEF,KAAK,MAAM,IAAI,IAAI,KAAK,EAAE;gBACxB,IAAI,MAAM,EAAE;oBACV,mBAAmB;oBACnB,IAAI,CAAC,MAAM,GAAG,MAAM,CAAA;iBACrB;gBACD,MAAM,QAAQ,GAAG,GAAG,MAAM,IAAI,MAAM,CAAC,OAAO,IAAI,IAAI,CAAC,KAAK,IAAI,IAAI,CAAC,GAAG,EAAE,CAAA;gBACxE,mBAAmB;gBACnB,IAAI,CAAC,OAAO,GAAG,OAAO,CAAA;gBACtB,IAAI,CAAC,QAAQ,GAAG,QAAQ,CAAA;gBACxB,QAAQ,CAAC,IAAI,CAAC;oBACZ,mBAAmB;oBACnB,GAAG,EAAE,CAAC,GAAW,EAAE,EAAE,CAAE,IAAgC,CAAC,GAAG,CAAC;oBAC5D,EAAE,EAAE,GAAG,EAAE,CAAC,QAAQ;oBAClB,mBAAmB;oBACnB,MAAM,EAAE,GAAG,EAAE,CAAC,IAAI;iBACnB,CAAC,CAAA;aACH;YACD,QAAQ,CAAC,QAAQ,EAAE,CAAA;QACrB,CAAC,EAAE,MAAM,CAAC,CAAA;IACZ,CAAC;IAED,uEAAuE;IACvE,KAAK,CAAC,iCAAiC,CAAC,QAAkB;QACxD,OAAO,EAAE,cAAc,EAAE,CAAC,EAAE,CAAA;IAC9B,CAAC;IAEM,aAAa,KAAU,CAAC;;AA1FjB,0BAAY,GAAG;IAC3B,eAAe;IACf,eAAe;IACf,gBAAgB;CACjB,CAAA;kBARkB,aAAa"}
@@ -1,2 +1,21 @@
1
- declare const BigWigAdapter: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
1
+ declare const BigWigAdapter: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
2
+ /**
3
+ * #slot
4
+ */
5
+ bigWigLocation: {
6
+ type: string;
7
+ defaultValue: {
8
+ uri: string;
9
+ locationType: string;
10
+ };
11
+ };
12
+ /**
13
+ * #slot
14
+ */
15
+ source: {
16
+ type: string;
17
+ defaultValue: string;
18
+ description: string;
19
+ };
20
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
2
21
  export default BigWigAdapter;
@@ -1,4 +1,3 @@
1
- /// <reference types="react" />
2
1
  import { AnyConfigurationModel } from '@jbrowse/core/configuration';
3
2
  declare const ConfirmDialog: ({ tracks, onClose, }: {
4
3
  tracks: AnyConfigurationModel[];
@@ -1,2 +1,34 @@
1
- declare const configSchema: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
1
+ declare const configSchema: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{}, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
2
+ color: {
3
+ type: string;
4
+ description: string;
5
+ defaultValue: string;
6
+ };
7
+ posColor: {
8
+ type: string;
9
+ description: string;
10
+ defaultValue: string;
11
+ };
12
+ negColor: {
13
+ type: string;
14
+ description: string;
15
+ defaultValue: string;
16
+ };
17
+ clipColor: {
18
+ type: string;
19
+ description: string;
20
+ defaultValue: string;
21
+ };
22
+ bicolorPivot: {
23
+ type: string;
24
+ model: import("mobx-state-tree").ISimpleType<string>;
25
+ description: string;
26
+ defaultValue: string;
27
+ };
28
+ bicolorPivotValue: {
29
+ type: string;
30
+ defaultValue: number;
31
+ description: string;
32
+ };
33
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>, undefined>>;
2
34
  export default configSchema;
@@ -1,2 +1,45 @@
1
- declare const configSchema: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
1
+ declare const configSchema: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
2
+ /**
3
+ * #slot
4
+ */
5
+ displayCrossHatches: {
6
+ type: string;
7
+ description: string;
8
+ defaultValue: boolean;
9
+ };
10
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
11
+ color: {
12
+ type: string;
13
+ description: string;
14
+ defaultValue: string; /**
15
+ * #baseConfiguration
16
+ */
17
+ };
18
+ posColor: {
19
+ type: string;
20
+ description: string;
21
+ defaultValue: string;
22
+ };
23
+ negColor: {
24
+ type: string;
25
+ description: string;
26
+ defaultValue: string;
27
+ };
28
+ clipColor: {
29
+ type: string;
30
+ description: string;
31
+ defaultValue: string;
32
+ };
33
+ bicolorPivot: {
34
+ type: string;
35
+ model: import("mobx-state-tree").ISimpleType<string>;
36
+ description: string;
37
+ defaultValue: string;
38
+ };
39
+ bicolorPivotValue: {
40
+ type: string;
41
+ defaultValue: number;
42
+ description: string;
43
+ };
44
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>, undefined>>;
2
45
  export default configSchema;
@@ -1,4 +1,3 @@
1
- /// <reference types="react" />
2
1
  declare function SetColorDialog({ model, handleClose, }: {
3
2
  model: {
4
3
  color?: string;
@@ -1,4 +1,3 @@
1
- /// <reference types="react" />
2
1
  import { WiggleDisplayModel } from '../models/model';
3
2
  declare const LinearWiggleDisplay: (props: {
4
3
  model: WiggleDisplayModel;
@@ -1,2 +1,99 @@
1
1
  import PluginManager from '@jbrowse/core/PluginManager';
2
- export default function WiggleConfigFactory(pluginManager: PluginManager): import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
2
+ export default function WiggleConfigFactory(pluginManager: PluginManager): import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
3
+ /**
4
+ * #slot
5
+ */
6
+ autoscale: {
7
+ type: string;
8
+ defaultValue: string;
9
+ model: import("mobx-state-tree").ISimpleType<string>;
10
+ description: string;
11
+ };
12
+ /**
13
+ * #slot
14
+ */
15
+ minimalTicks: {
16
+ type: string;
17
+ defaultValue: boolean;
18
+ description: string;
19
+ };
20
+ /**
21
+ * #slot
22
+ */
23
+ minScore: {
24
+ type: string;
25
+ defaultValue: number;
26
+ description: string;
27
+ };
28
+ /**
29
+ * #slot
30
+ */
31
+ maxScore: {
32
+ type: string;
33
+ description: string;
34
+ defaultValue: number;
35
+ };
36
+ /**
37
+ * #slot
38
+ */
39
+ numStdDev: {
40
+ type: string;
41
+ description: string;
42
+ defaultValue: number;
43
+ };
44
+ /**
45
+ * #slot
46
+ */
47
+ scaleType: {
48
+ type: string;
49
+ model: import("mobx-state-tree").ISimpleType<string>;
50
+ description: string;
51
+ defaultValue: string;
52
+ };
53
+ /**
54
+ * #slot
55
+ */
56
+ inverted: {
57
+ type: string;
58
+ description: string;
59
+ defaultValue: boolean;
60
+ };
61
+ /**
62
+ * #slot
63
+ */
64
+ defaultRendering: {
65
+ type: string;
66
+ model: import("mobx-state-tree").ISimpleType<string>;
67
+ defaultValue: string;
68
+ };
69
+ /**
70
+ * #slot
71
+ */
72
+ renderers: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
73
+ DensityRenderer: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
74
+ XYPlotRenderer: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
75
+ LinePlotRenderer: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
76
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
77
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
78
+ maxFeatureScreenDensity: {
79
+ type: string;
80
+ description: string;
81
+ defaultValue: number;
82
+ };
83
+ fetchSizeLimit: {
84
+ type: string;
85
+ defaultValue: number;
86
+ description: string;
87
+ };
88
+ height: {
89
+ type: string;
90
+ defaultValue: number;
91
+ description: string;
92
+ };
93
+ mouseover: {
94
+ type: string;
95
+ description: string;
96
+ defaultValue: string;
97
+ contextVariable: string[];
98
+ };
99
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>, undefined>>;
@@ -19,9 +19,7 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
19
19
  refName: import("mobx-state-tree").ISimpleType<string>;
20
20
  start: import("mobx-state-tree").ISimpleType<number>;
21
21
  end: import("mobx-state-tree").ISimpleType<number>;
22
- reversed: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>; /**
23
- * #property
24
- */
22
+ reversed: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
25
23
  } & {
26
24
  assemblyName: import("mobx-state-tree").ISimpleType<string>;
27
25
  }, {
@@ -41,15 +39,11 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
41
39
  message: string | undefined;
42
40
  maxHeightReached: boolean;
43
41
  ReactComponent: ({ model, }: {
44
- model: any; /**
45
- * #property
46
- */
42
+ model: any;
47
43
  }) => any;
48
44
  renderProps: any;
49
45
  } & {
50
- doReload(): void; /**
51
- * #property
52
- */
46
+ doReload(): void;
53
47
  afterAttach(): void;
54
48
  setStatus(message: string): void;
55
49
  setLoading(abortController: AbortController): void;
@@ -59,14 +53,41 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
59
53
  features: Map<string, Feature>;
60
54
  layout: any;
61
55
  maxHeightReached: boolean;
62
- renderProps: any;
56
+ renderProps: any; /**
57
+ * #action
58
+ */
63
59
  } | undefined): void;
64
60
  setError(error: unknown): void;
65
61
  reload(): void;
66
62
  beforeDestroy(): void;
67
- }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
63
+ }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>; /**
64
+ * #property
65
+ */
68
66
  userBpPerPxLimit: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
69
67
  userByteSizeLimit: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
68
+ configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
69
+ maxFeatureScreenDensity: {
70
+ type: string;
71
+ description: string;
72
+ defaultValue: number;
73
+ };
74
+ fetchSizeLimit: {
75
+ type: string;
76
+ defaultValue: number;
77
+ description: string;
78
+ };
79
+ height: {
80
+ type: string;
81
+ defaultValue: number;
82
+ description: string;
83
+ };
84
+ mouseover: {
85
+ type: string;
86
+ description: string;
87
+ defaultValue: string;
88
+ contextVariable: string[];
89
+ };
90
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
70
91
  } & {
71
92
  /**
72
93
  * #property
@@ -75,7 +96,7 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
75
96
  /**
76
97
  * #property
77
98
  */
78
- configuration: import("mobx-state-tree").ITypeUnion<any, any, any>;
99
+ configuration: AnyConfigurationSchemaType;
79
100
  /**
80
101
  * #property
81
102
  */
@@ -161,13 +182,15 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
161
182
  rpcDriverName: string | undefined;
162
183
  } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
163
184
  rendererTypeName: string;
164
- error: unknown;
185
+ error: unknown; /**
186
+ * #property
187
+ */
165
188
  } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
166
189
  id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
167
- type: import("mobx-state-tree").ISimpleType<string>; /**
190
+ type: import("mobx-state-tree").ISimpleType<string>;
191
+ rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>; /**
168
192
  * #property
169
193
  */
170
- rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
171
194
  }, {
172
195
  rendererTypeName: string;
173
196
  error: unknown;
@@ -192,9 +215,12 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
192
215
  scrollTop: number;
193
216
  message: string;
194
217
  featureIdUnderMouse: string | undefined;
218
+ /**
219
+ * #property
220
+ */
195
221
  contextMenuFeature: Feature | undefined;
196
- estimatedRegionStatsP: Promise<import("@jbrowse/core/data_adapters/BaseAdapter").Stats> | undefined;
197
- estimatedRegionStats: import("@jbrowse/core/data_adapters/BaseAdapter").Stats | undefined;
222
+ featureDensityStatsP: Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats> | undefined;
223
+ featureDensityStats: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats | undefined;
198
224
  } & {
199
225
  readonly height: number;
200
226
  readonly blockType: "dynamicBlocks" | "staticBlocks";
@@ -203,67 +229,54 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
203
229
  readonly renderDelay: number;
204
230
  readonly TooltipComponent: React.FC<any>;
205
231
  readonly selectedFeatureId: string | undefined;
206
- readonly DisplayMessageComponent: React.FC<any> | undefined; /**
207
- * #action
208
- */
232
+ readonly DisplayMessageComponent: React.FC<any> | undefined;
209
233
  } & {
210
- readonly features: import("@jbrowse/core/util/compositeMap").default<string, Feature>; /**
211
- * #action
212
- */
234
+ readonly features: import("@jbrowse/core/util/compositeMap").default<string, Feature>;
213
235
  readonly featureUnderMouse: Feature | undefined;
214
- getFeatureOverlapping(blockKey: string, x: number, y: number): any; /**
215
- * #action
216
- */
236
+ getFeatureOverlapping(blockKey: string, x: number, y: number): string | undefined;
217
237
  getFeatureByID(blockKey: string, id: string): [number, number, number, number] | undefined;
218
238
  searchFeatureByID(id: string): [number, number, number, number] | undefined;
219
239
  readonly currentBytesRequested: number;
220
240
  readonly currentFeatureScreenDensity: number;
221
241
  readonly maxFeatureScreenDensity: any;
222
- /**
242
+ readonly featureDensityStatsReady: boolean; /**
223
243
  * #getter
224
244
  */
225
- readonly estimatedStatsReady: boolean;
226
245
  readonly maxAllowableBytes: number;
227
246
  } & {
228
247
  setMessage(message: string): void;
248
+ } & {
229
249
  afterAttach(): void;
230
- estimateRegionsStats(regions: import("@jbrowse/core/util").Region[], opts: {
231
- headers?: Record<string, string> | undefined;
232
- signal?: AbortSignal | undefined;
233
- filters?: string[] | undefined;
234
- }): Promise<{}>;
235
- setRegionStatsP(p?: Promise<import("@jbrowse/core/data_adapters/BaseAdapter").Stats> | undefined): void;
236
- setRegionStats(estimatedRegionStats?: import("@jbrowse/core/data_adapters/BaseAdapter").Stats | undefined): void;
237
- clearRegionStats(): void;
250
+ getFeatureDensityStats(): Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
251
+ setFeatureDensityStatsP(arg: any): void;
252
+ setFeatureDensityStats(featureDensityStats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats | undefined): void;
253
+ clearFeatureDensityStats(): void;
238
254
  setHeight(displayHeight: number): number;
239
255
  resizeHeight(distance: number): number;
240
256
  setScrollTop(scrollTop: number): void;
241
- updateStatsLimit(stats: import("@jbrowse/core/data_adapters/BaseAdapter").Stats): void;
257
+ setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats | undefined): void;
242
258
  addBlock(key: string, block: import("@jbrowse/core/util/blockTypes").BaseBlock): void;
243
259
  setCurrBpPerPx(n: number): void;
244
260
  deleteBlock(key: string): void;
245
261
  selectFeature(feature: Feature): void;
246
262
  clearFeatureSelection(): void;
247
- setFeatureIdUnderMouse(feature: string | undefined): void;
263
+ setFeatureIdUnderMouse(feature?: string | undefined): void;
248
264
  reload(): void;
249
265
  setContextMenuFeature(feature?: Feature | undefined): void;
250
266
  } & {
251
267
  readonly regionTooLarge: boolean;
252
268
  readonly regionTooLargeReason: string;
253
269
  } & {
254
- reload(): Promise<void>;
270
+ reload(): Promise<void>; /**
271
+ * #method
272
+ */
273
+ } & {
255
274
  afterAttach(): void;
256
275
  } & {
257
276
  regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
258
277
  regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): JSX.Element | null;
259
278
  trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
260
- contextMenuItems(): {
261
- label: string;
262
- icon: import("@mui/material/OverridableComponent").OverridableComponent<import("@mui/material").SvgIconTypeMap<{}, "svg">> & {
263
- muiName: string;
264
- };
265
- onClick: () => void;
266
- }[];
279
+ contextMenuItems(): import("@jbrowse/core/ui").MenuItem[];
267
280
  renderProps(): any;
268
281
  } & {
269
282
  renderSvg(opts: import("@jbrowse/plugin-linear-genome-view/src/LinearGenomeView").ExportSvgOptions & {
@@ -281,7 +294,7 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
281
294
  /**
282
295
  * #action
283
296
  */
284
- updateStats(stats: {
297
+ updateQuantitativeStats(stats: {
285
298
  scoreMin: number;
286
299
  scoreMax: number;
287
300
  }): void;
@@ -518,9 +531,7 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
518
531
  refName: import("mobx-state-tree").ISimpleType<string>;
519
532
  start: import("mobx-state-tree").ISimpleType<number>;
520
533
  end: import("mobx-state-tree").ISimpleType<number>;
521
- reversed: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>; /**
522
- * #property
523
- */
534
+ reversed: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
524
535
  } & {
525
536
  assemblyName: import("mobx-state-tree").ISimpleType<string>;
526
537
  }, {
@@ -540,15 +551,11 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
540
551
  message: string | undefined;
541
552
  maxHeightReached: boolean;
542
553
  ReactComponent: ({ model, }: {
543
- model: any; /**
544
- * #property
545
- */
554
+ model: any;
546
555
  }) => any;
547
556
  renderProps: any;
548
557
  } & {
549
- doReload(): void; /**
550
- * #property
551
- */
558
+ doReload(): void;
552
559
  afterAttach(): void;
553
560
  setStatus(message: string): void;
554
561
  setLoading(abortController: AbortController): void;
@@ -558,17 +565,45 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
558
565
  features: Map<string, Feature>;
559
566
  layout: any;
560
567
  maxHeightReached: boolean;
561
- renderProps: any;
568
+ renderProps: any; /**
569
+ * #action
570
+ */
562
571
  } | undefined): void;
563
572
  setError(error: unknown): void;
564
573
  reload(): void;
565
574
  beforeDestroy(): void;
566
- }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
575
+ }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>; /**
576
+ * #property
577
+ */
567
578
  userBpPerPxLimit: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
568
579
  userByteSizeLimit: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
580
+ configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
581
+ maxFeatureScreenDensity: {
582
+ type: string;
583
+ description: string;
584
+ defaultValue: number;
585
+ };
586
+ fetchSizeLimit: {
587
+ type: string;
588
+ defaultValue: number;
589
+ description: string;
590
+ };
591
+ height: {
592
+ type: string;
593
+ defaultValue: number;
594
+ description: string;
595
+ };
596
+ mouseover: {
597
+ type: string;
598
+ description: string;
599
+ defaultValue: string;
600
+ contextVariable: string[];
601
+ };
602
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
569
603
  }>> & import("mobx-state-tree/dist/internal").NonEmptyObject & import("mobx-state-tree")._NotCustomized, {
570
604
  type: string;
571
605
  id: string;
606
+ configuration: import("mobx-state-tree").ModelSnapshotType<Record<string, any>>;
572
607
  rpcDriverName: string | undefined;
573
608
  heightPreConfig: number | undefined;
574
609
  userBpPerPxLimit: number | undefined;
@@ -124,7 +124,7 @@ function stateModelFactory(pluginManager, configSchema) {
124
124
  /**
125
125
  * #action
126
126
  */
127
- updateStats(stats) {
127
+ updateQuantitativeStats(stats) {
128
128
  const { scoreMin, scoreMax } = stats;
129
129
  const EPSILON = 0.000001;
130
130
  if (!self.stats) {
@@ -316,8 +316,8 @@ function stateModelFactory(pluginManager, configSchema) {
316
316
  * #getter
317
317
  */
318
318
  get rendererConfig() {
319
- const configBlob = (0, configuration_1.getConf)(self, ['renderers', self.rendererTypeName]) || {};
320
- const { color, displayCrossHatches, fill, minSize, negColor, posColor, summaryScoreMode, scaleType, } = self;
319
+ const { color, displayCrossHatches, fill, minSize, negColor, posColor, summaryScoreMode, scaleType, rendererTypeName, } = self;
320
+ const configBlob = (0, configuration_1.getConf)(self, ['renderers', rendererTypeName]) || {};
321
321
  return self.rendererType.configSchema.create({
322
322
  ...configBlob,
323
323
  ...(scaleType ? { scaleType } : {}),
@@ -340,15 +340,13 @@ function stateModelFactory(pluginManager, configSchema) {
340
340
  * #getter
341
341
  */
342
342
  get filled() {
343
- const { fill, rendererConfig: conf } = self;
344
- return fill !== null && fill !== void 0 ? fill : (0, configuration_1.readConfObject)(conf, 'filled');
343
+ return (0, configuration_1.readConfObject)(self.rendererConfig, 'filled');
345
344
  },
346
345
  /**
347
346
  * #getter
348
347
  */
349
348
  get summaryScoreModeSetting() {
350
- const { summaryScoreMode, rendererConfig: conf } = self;
351
- return summaryScoreMode !== null && summaryScoreMode !== void 0 ? summaryScoreMode : (0, configuration_1.readConfObject)(conf, 'summaryScoreMode');
349
+ return (0, configuration_1.readConfObject)(self.rendererConfig, 'summaryScoreMode');
352
350
  },
353
351
  /**
354
352
  * #getter
@@ -409,8 +407,7 @@ function stateModelFactory(pluginManager, configSchema) {
409
407
  * #getter
410
408
  */
411
409
  get displayCrossHatchesSetting() {
412
- const { displayCrossHatches: hatches, rendererConfig: conf } = self;
413
- return hatches !== null && hatches !== void 0 ? hatches : (0, configuration_1.readConfObject)(conf, 'displayCrossHatches');
410
+ return (0, configuration_1.readConfObject)(self.rendererConfig, 'displayCrossHatches');
414
411
  },
415
412
  };
416
413
  })
@@ -621,24 +618,10 @@ function stateModelFactory(pluginManager, configSchema) {
621
618
  */
622
619
  async reload() {
623
620
  self.setError();
624
- const aborter = new AbortController();
625
- self.setLoading(aborter);
626
- try {
627
- const stats = await (0, util_2.getStats)(self, {
628
- signal: aborter.signal,
629
- ...self.renderProps(),
630
- });
631
- if ((0, mobx_state_tree_1.isAlive)(self)) {
632
- self.updateStats(stats);
633
- superReload();
634
- }
635
- }
636
- catch (e) {
637
- self.setError(e);
638
- }
621
+ superReload();
639
622
  },
640
623
  afterAttach() {
641
- (0, util_2.statsAutorun)(self);
624
+ (0, util_2.quantitativeStatsAutorun)(self);
642
625
  },
643
626
  /**
644
627
  * #action