@jbrowse/plugin-wiggle 2.16.1 → 2.18.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/BigWigAdapter/BigWigAdapter.d.ts +4 -3
- package/dist/BigWigAdapter/BigWigAdapter.js +3 -8
- package/dist/BigWigAdapter/configSchema.d.ts +0 -9
- package/dist/BigWigAdapter/configSchema.js +1 -13
- package/dist/BigWigAdapter/index.d.ts +1 -1
- package/dist/CreateMultiWiggleExtension/ConfirmDialog.d.ts +1 -1
- package/dist/CreateMultiWiggleExtension/ConfirmDialog.js +2 -2
- package/dist/CreateMultiWiggleExtension/index.d.ts +1 -1
- package/dist/CreateMultiWiggleExtension/index.js +26 -26
- package/dist/DensityRenderer/DensityRenderer.d.ts +2 -1
- package/dist/DensityRenderer/DensityRenderer.js +1 -1
- package/dist/DensityRenderer/configSchema.js +1 -7
- package/dist/DensityRenderer/index.d.ts +1 -1
- package/dist/DensityRenderer/index.js +1 -1
- package/dist/LinePlotRenderer/LinePlotRenderer.d.ts +3 -2
- package/dist/LinePlotRenderer/LinePlotRenderer.js +1 -1
- package/dist/LinePlotRenderer/configSchema.d.ts +0 -3
- package/dist/LinePlotRenderer/configSchema.js +1 -10
- package/dist/LinePlotRenderer/index.d.ts +1 -1
- package/dist/LinearWiggleDisplay/components/SetColorDialog.js +2 -2
- package/dist/LinearWiggleDisplay/components/Tooltip.d.ts +2 -2
- package/dist/LinearWiggleDisplay/components/Tooltip.js +1 -2
- package/dist/LinearWiggleDisplay/components/WiggleDisplayComponent.d.ts +1 -1
- package/dist/LinearWiggleDisplay/components/WiggleDisplayComponent.js +2 -2
- package/dist/LinearWiggleDisplay/{models/configSchema.d.ts → configSchema.d.ts} +1 -12
- package/dist/LinearWiggleDisplay/{models/configSchema.js → configSchema.js} +2 -17
- package/dist/LinearWiggleDisplay/index.d.ts +2 -2
- package/dist/LinearWiggleDisplay/index.js +4 -4
- package/{esm/LinearWiggleDisplay/models → dist/LinearWiggleDisplay}/model.d.ts +21 -63
- package/dist/LinearWiggleDisplay/{models/model.js → model.js} +66 -80
- package/dist/LinearWiggleDisplay/{models/renderSvg.d.ts → renderSvg.d.ts} +2 -2
- package/dist/LinearWiggleDisplay/{models/renderSvg.js → renderSvg.js} +2 -2
- package/dist/MultiDensityRenderer/MultiDensityRenderer.d.ts +4 -3
- package/dist/MultiDensityRenderer/MultiDensityRenderer.js +2 -3
- package/dist/MultiDensityRenderer/configSchema.js +1 -7
- package/dist/MultiDensityRenderer/index.d.ts +1 -1
- package/dist/MultiLineRenderer/MultiLineRenderer.d.ts +3 -2
- package/dist/MultiLineRenderer/MultiLineRenderer.js +1 -2
- package/dist/MultiLineRenderer/configSchema.d.ts +0 -6
- package/dist/MultiLineRenderer/configSchema.js +1 -13
- package/dist/MultiLineRenderer/index.d.ts +1 -1
- package/dist/MultiLinearWiggleDisplay/components/ColorLegend.d.ts +1 -1
- package/dist/MultiLinearWiggleDisplay/components/ColorLegend.js +0 -1
- package/dist/MultiLinearWiggleDisplay/components/DraggableDialog.d.ts +1 -1
- package/dist/MultiLinearWiggleDisplay/components/DraggableDialog.js +3 -7
- package/dist/MultiLinearWiggleDisplay/components/RectBg.js +1 -1
- package/dist/MultiLinearWiggleDisplay/components/ScoreLegend.d.ts +1 -1
- package/dist/MultiLinearWiggleDisplay/components/SetColorDialog.d.ts +1 -1
- package/dist/MultiLinearWiggleDisplay/components/SetColorDialog.js +3 -5
- package/dist/MultiLinearWiggleDisplay/components/SourcesGrid.d.ts +1 -1
- package/dist/MultiLinearWiggleDisplay/components/SourcesGrid.js +15 -26
- package/dist/MultiLinearWiggleDisplay/components/Tooltip.d.ts +3 -3
- package/dist/MultiLinearWiggleDisplay/components/Tooltip.js +1 -2
- package/dist/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.d.ts +1 -1
- package/dist/MultiLinearWiggleDisplay/components/YScaleBars.d.ts +1 -1
- package/dist/MultiLinearWiggleDisplay/components/YScaleBars.js +1 -1
- package/dist/MultiLinearWiggleDisplay/components/util.d.ts +1 -1
- package/dist/MultiLinearWiggleDisplay/components/util.js +1 -1
- package/dist/MultiLinearWiggleDisplay/{models/configSchema.d.ts → configSchema.d.ts} +1 -10
- package/dist/MultiLinearWiggleDisplay/{models/configSchema.js → configSchema.js} +3 -21
- package/dist/MultiLinearWiggleDisplay/index.d.ts +1 -1
- package/dist/MultiLinearWiggleDisplay/index.js +3 -3
- package/dist/MultiLinearWiggleDisplay/{models/model.d.ts → model.d.ts} +25 -129
- package/dist/MultiLinearWiggleDisplay/{models/model.js → model.js} +108 -183
- package/dist/MultiLinearWiggleDisplay/{models/renderSvg.d.ts → renderSvg.d.ts} +2 -2
- package/dist/MultiLinearWiggleDisplay/{models/renderSvg.js → renderSvg.js} +2 -2
- package/dist/MultiQuantitativeTrack/configSchema.d.ts +1 -1
- package/dist/MultiQuantitativeTrack/configSchema.js +1 -7
- package/dist/MultiQuantitativeTrack/index.d.ts +1 -1
- package/dist/MultiQuantitativeTrack/index.js +1 -1
- package/dist/MultiRowLineRenderer/MultiRowLineRenderer.d.ts +3 -2
- package/dist/MultiRowLineRenderer/MultiRowLineRenderer.js +1 -2
- package/dist/MultiRowLineRenderer/configSchema.d.ts +0 -6
- package/dist/MultiRowLineRenderer/configSchema.js +2 -14
- package/dist/MultiRowLineRenderer/index.d.ts +1 -1
- package/dist/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.d.ts +3 -2
- package/dist/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.js +1 -2
- package/dist/MultiRowXYPlotRenderer/configSchema.d.ts +0 -12
- package/dist/MultiRowXYPlotRenderer/configSchema.js +3 -21
- package/dist/MultiRowXYPlotRenderer/index.d.ts +1 -1
- package/dist/MultiWiggleAdapter/MultiWiggleAdapter.d.ts +5 -4
- package/dist/MultiWiggleAdapter/MultiWiggleAdapter.js +12 -15
- package/dist/MultiWiggleAdapter/configSchema.d.ts +0 -6
- package/dist/MultiWiggleAdapter/configSchema.js +1 -10
- package/dist/MultiWiggleAdapter/index.d.ts +1 -1
- package/dist/MultiWiggleAdapter/index.js +1 -1
- package/dist/MultiWiggleAddTrackWorkflow/AddTrackWorkflow.d.ts +1 -1
- package/dist/MultiWiggleAddTrackWorkflow/AddTrackWorkflow.js +2 -4
- package/dist/MultiWiggleAddTrackWorkflow/index.d.ts +1 -1
- package/dist/MultiWiggleAddTrackWorkflow/index.js +1 -2
- package/dist/MultiWiggleRendering.d.ts +3 -3
- package/dist/MultiWiggleRendering.js +2 -2
- package/dist/MultiXYPlotRenderer/MultiXYPlotRenderer.d.ts +3 -2
- package/dist/MultiXYPlotRenderer/MultiXYPlotRenderer.js +1 -2
- package/dist/MultiXYPlotRenderer/configSchema.d.ts +0 -12
- package/dist/MultiXYPlotRenderer/configSchema.js +2 -20
- package/dist/MultiXYPlotRenderer/index.d.ts +1 -1
- package/dist/QuantitativeTrack/configSchema.d.ts +1 -1
- package/dist/QuantitativeTrack/configSchema.js +1 -7
- package/dist/QuantitativeTrack/index.d.ts +1 -1
- package/dist/QuantitativeTrack/index.js +1 -1
- package/dist/Tooltip.d.ts +1 -1
- package/dist/Tooltip.js +1 -2
- package/dist/WiggleBaseRenderer.d.ts +6 -9
- package/dist/WiggleBaseRenderer.js +0 -1
- package/dist/WiggleRPC/MultiWiggleGetSources.d.ts +5 -12
- package/dist/WiggleRPC/MultiWiggleGetSources.js +2 -29
- package/dist/WiggleRPC/WiggleGetGlobalQuantitativeStats.d.ts +5 -7
- package/dist/WiggleRPC/WiggleGetGlobalQuantitativeStats.js +2 -15
- package/dist/WiggleRPC/WiggleGetMultiRegionQuantitativeStats.d.ts +4 -11
- package/dist/WiggleRPC/WiggleGetMultiRegionQuantitativeStats.js +2 -29
- package/dist/WiggleRendering.d.ts +2 -2
- package/dist/WiggleRendering.js +1 -3
- package/dist/XYPlotRenderer/XYPlotRenderer.d.ts +3 -2
- package/dist/XYPlotRenderer/XYPlotRenderer.js +3 -5
- package/dist/XYPlotRenderer/configSchema.d.ts +0 -12
- package/dist/XYPlotRenderer/configSchema.js +3 -21
- package/dist/XYPlotRenderer/index.d.ts +1 -1
- package/dist/configSchema.d.ts +0 -18
- package/dist/configSchema.js +1 -23
- package/dist/drawDensity.d.ts +3 -3
- package/dist/drawDensity.js +0 -4
- package/dist/drawLine.d.ts +3 -3
- package/dist/drawLine.js +0 -5
- package/dist/drawXY.d.ts +4 -3
- package/dist/drawXY.js +28 -12
- package/dist/getMultiWiggleSourcesAutorun.d.ts +17 -0
- package/dist/getMultiWiggleSourcesAutorun.js +38 -0
- package/dist/getQuantitativeStats.d.ts +13 -0
- package/dist/getQuantitativeStats.js +70 -0
- package/dist/getQuantitativeStatsAutorun.d.ts +13 -0
- package/dist/getQuantitativeStatsAutorun.js +35 -0
- package/dist/index.d.ts +6 -6
- package/dist/index.js +21 -24
- package/dist/shared/SetMinMaxDialog.js +1 -1
- package/{esm/shared/configShared.d.ts → dist/shared/SharedWiggleConfigSchema.d.ts} +0 -26
- package/dist/shared/{configShared.js → SharedWiggleConfigSchema.js} +1 -30
- package/{esm/shared/modelShared.d.ts → dist/shared/SharedWiggleMixin.d.ts} +22 -213
- package/dist/shared/{modelShared.js → SharedWiggleMixin.js} +15 -174
- package/dist/util.d.ts +1 -53
- package/dist/util.js +1 -141
- package/esm/BigWigAdapter/BigWigAdapter.d.ts +4 -3
- package/esm/BigWigAdapter/BigWigAdapter.js +5 -10
- package/esm/BigWigAdapter/configSchema.d.ts +0 -9
- package/esm/BigWigAdapter/configSchema.js +1 -13
- package/esm/BigWigAdapter/index.d.ts +1 -1
- package/esm/CreateMultiWiggleExtension/ConfirmDialog.d.ts +1 -1
- package/esm/CreateMultiWiggleExtension/ConfirmDialog.js +2 -2
- package/esm/CreateMultiWiggleExtension/index.d.ts +1 -1
- package/esm/CreateMultiWiggleExtension/index.js +26 -26
- package/esm/DensityRenderer/DensityRenderer.d.ts +2 -1
- package/esm/DensityRenderer/DensityRenderer.js +1 -1
- package/esm/DensityRenderer/configSchema.js +1 -7
- package/esm/DensityRenderer/index.d.ts +1 -1
- package/esm/DensityRenderer/index.js +1 -1
- package/esm/LinePlotRenderer/LinePlotRenderer.d.ts +3 -2
- package/esm/LinePlotRenderer/LinePlotRenderer.js +1 -1
- package/esm/LinePlotRenderer/configSchema.d.ts +0 -3
- package/esm/LinePlotRenderer/configSchema.js +1 -10
- package/esm/LinePlotRenderer/index.d.ts +1 -1
- package/esm/LinearWiggleDisplay/components/SetColorDialog.js +2 -2
- package/esm/LinearWiggleDisplay/components/Tooltip.d.ts +2 -2
- package/esm/LinearWiggleDisplay/components/Tooltip.js +1 -2
- package/esm/LinearWiggleDisplay/components/WiggleDisplayComponent.d.ts +1 -1
- package/esm/LinearWiggleDisplay/components/WiggleDisplayComponent.js +3 -3
- package/esm/LinearWiggleDisplay/{models/configSchema.d.ts → configSchema.d.ts} +1 -12
- package/esm/LinearWiggleDisplay/{models/configSchema.js → configSchema.js} +1 -16
- package/esm/LinearWiggleDisplay/index.d.ts +2 -2
- package/esm/LinearWiggleDisplay/index.js +4 -4
- package/{dist/LinearWiggleDisplay/models → esm/LinearWiggleDisplay}/model.d.ts +21 -63
- package/esm/LinearWiggleDisplay/{models/model.js → model.js} +67 -81
- package/esm/LinearWiggleDisplay/{models/renderSvg.d.ts → renderSvg.d.ts} +2 -2
- package/esm/LinearWiggleDisplay/{models/renderSvg.js → renderSvg.js} +2 -2
- package/esm/MultiDensityRenderer/MultiDensityRenderer.d.ts +4 -3
- package/esm/MultiDensityRenderer/MultiDensityRenderer.js +1 -2
- package/esm/MultiDensityRenderer/configSchema.js +1 -7
- package/esm/MultiDensityRenderer/index.d.ts +1 -1
- package/esm/MultiLineRenderer/MultiLineRenderer.d.ts +3 -2
- package/esm/MultiLineRenderer/MultiLineRenderer.js +1 -2
- package/esm/MultiLineRenderer/configSchema.d.ts +0 -6
- package/esm/MultiLineRenderer/configSchema.js +1 -13
- package/esm/MultiLineRenderer/index.d.ts +1 -1
- package/esm/MultiLinearWiggleDisplay/components/ColorLegend.d.ts +1 -1
- package/esm/MultiLinearWiggleDisplay/components/ColorLegend.js +0 -1
- package/esm/MultiLinearWiggleDisplay/components/DraggableDialog.d.ts +1 -1
- package/esm/MultiLinearWiggleDisplay/components/DraggableDialog.js +4 -8
- package/esm/MultiLinearWiggleDisplay/components/RectBg.js +1 -1
- package/esm/MultiLinearWiggleDisplay/components/ScoreLegend.d.ts +1 -1
- package/esm/MultiLinearWiggleDisplay/components/ScoreLegend.js +1 -1
- package/esm/MultiLinearWiggleDisplay/components/SetColorDialog.d.ts +1 -1
- package/esm/MultiLinearWiggleDisplay/components/SetColorDialog.js +4 -6
- package/esm/MultiLinearWiggleDisplay/components/SourcesGrid.d.ts +1 -1
- package/esm/MultiLinearWiggleDisplay/components/SourcesGrid.js +16 -27
- package/esm/MultiLinearWiggleDisplay/components/Tooltip.d.ts +3 -3
- package/esm/MultiLinearWiggleDisplay/components/Tooltip.js +1 -2
- package/esm/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.d.ts +1 -1
- package/esm/MultiLinearWiggleDisplay/components/YScaleBars.d.ts +1 -1
- package/esm/MultiLinearWiggleDisplay/components/YScaleBars.js +2 -2
- package/esm/MultiLinearWiggleDisplay/components/util.d.ts +1 -1
- package/esm/MultiLinearWiggleDisplay/components/util.js +1 -1
- package/esm/MultiLinearWiggleDisplay/{models/configSchema.d.ts → configSchema.d.ts} +1 -10
- package/esm/MultiLinearWiggleDisplay/{models/configSchema.js → configSchema.js} +2 -20
- package/esm/MultiLinearWiggleDisplay/index.d.ts +1 -1
- package/esm/MultiLinearWiggleDisplay/index.js +3 -3
- package/esm/MultiLinearWiggleDisplay/{models/model.d.ts → model.d.ts} +25 -129
- package/esm/MultiLinearWiggleDisplay/{models/model.js → model.js} +108 -183
- package/esm/MultiLinearWiggleDisplay/{models/renderSvg.d.ts → renderSvg.d.ts} +2 -2
- package/esm/MultiLinearWiggleDisplay/{models/renderSvg.js → renderSvg.js} +2 -2
- package/esm/MultiQuantitativeTrack/configSchema.d.ts +1 -1
- package/esm/MultiQuantitativeTrack/configSchema.js +1 -7
- package/esm/MultiQuantitativeTrack/index.d.ts +1 -1
- package/esm/MultiQuantitativeTrack/index.js +1 -1
- package/esm/MultiRowLineRenderer/MultiRowLineRenderer.d.ts +3 -2
- package/esm/MultiRowLineRenderer/MultiRowLineRenderer.js +1 -2
- package/esm/MultiRowLineRenderer/configSchema.d.ts +0 -6
- package/esm/MultiRowLineRenderer/configSchema.js +2 -14
- package/esm/MultiRowLineRenderer/index.d.ts +1 -1
- package/esm/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.d.ts +3 -2
- package/esm/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.js +1 -2
- package/esm/MultiRowXYPlotRenderer/configSchema.d.ts +0 -12
- package/esm/MultiRowXYPlotRenderer/configSchema.js +3 -21
- package/esm/MultiRowXYPlotRenderer/index.d.ts +1 -1
- package/esm/MultiWiggleAdapter/MultiWiggleAdapter.d.ts +5 -4
- package/esm/MultiWiggleAdapter/MultiWiggleAdapter.js +13 -16
- package/esm/MultiWiggleAdapter/configSchema.d.ts +0 -6
- package/esm/MultiWiggleAdapter/configSchema.js +1 -10
- package/esm/MultiWiggleAdapter/index.d.ts +1 -1
- package/esm/MultiWiggleAdapter/index.js +1 -1
- package/esm/MultiWiggleAddTrackWorkflow/AddTrackWorkflow.d.ts +1 -1
- package/esm/MultiWiggleAddTrackWorkflow/AddTrackWorkflow.js +2 -4
- package/esm/MultiWiggleAddTrackWorkflow/index.d.ts +1 -1
- package/esm/MultiWiggleAddTrackWorkflow/index.js +1 -2
- package/esm/MultiWiggleRendering.d.ts +3 -3
- package/esm/MultiWiggleRendering.js +2 -2
- package/esm/MultiXYPlotRenderer/MultiXYPlotRenderer.d.ts +3 -2
- package/esm/MultiXYPlotRenderer/MultiXYPlotRenderer.js +1 -2
- package/esm/MultiXYPlotRenderer/configSchema.d.ts +0 -12
- package/esm/MultiXYPlotRenderer/configSchema.js +2 -20
- package/esm/MultiXYPlotRenderer/index.d.ts +1 -1
- package/esm/QuantitativeTrack/configSchema.d.ts +1 -1
- package/esm/QuantitativeTrack/configSchema.js +1 -7
- package/esm/QuantitativeTrack/index.d.ts +1 -1
- package/esm/QuantitativeTrack/index.js +1 -1
- package/esm/Tooltip.d.ts +1 -1
- package/esm/Tooltip.js +1 -2
- package/esm/WiggleBaseRenderer.d.ts +6 -9
- package/esm/WiggleBaseRenderer.js +0 -1
- package/esm/WiggleRPC/MultiWiggleGetSources.d.ts +5 -12
- package/esm/WiggleRPC/MultiWiggleGetSources.js +2 -29
- package/esm/WiggleRPC/WiggleGetGlobalQuantitativeStats.d.ts +5 -7
- package/esm/WiggleRPC/WiggleGetGlobalQuantitativeStats.js +2 -15
- package/esm/WiggleRPC/WiggleGetMultiRegionQuantitativeStats.d.ts +4 -11
- package/esm/WiggleRPC/WiggleGetMultiRegionQuantitativeStats.js +2 -29
- package/esm/WiggleRendering.d.ts +2 -2
- package/esm/WiggleRendering.js +1 -3
- package/esm/XYPlotRenderer/XYPlotRenderer.d.ts +3 -2
- package/esm/XYPlotRenderer/XYPlotRenderer.js +3 -5
- package/esm/XYPlotRenderer/configSchema.d.ts +0 -12
- package/esm/XYPlotRenderer/configSchema.js +3 -21
- package/esm/XYPlotRenderer/index.d.ts +1 -1
- package/esm/configSchema.d.ts +0 -18
- package/esm/configSchema.js +1 -23
- package/esm/drawDensity.d.ts +3 -3
- package/esm/drawDensity.js +1 -5
- package/esm/drawLine.d.ts +3 -3
- package/esm/drawLine.js +1 -6
- package/esm/drawXY.d.ts +4 -3
- package/esm/drawXY.js +29 -13
- package/esm/getMultiWiggleSourcesAutorun.d.ts +17 -0
- package/esm/getMultiWiggleSourcesAutorun.js +35 -0
- package/esm/getQuantitativeStats.d.ts +13 -0
- package/esm/getQuantitativeStats.js +67 -0
- package/esm/getQuantitativeStatsAutorun.d.ts +13 -0
- package/esm/getQuantitativeStatsAutorun.js +32 -0
- package/esm/index.d.ts +6 -6
- package/esm/index.js +13 -16
- package/esm/shared/SetMinMaxDialog.js +1 -1
- package/{dist/shared/configShared.d.ts → esm/shared/SharedWiggleConfigSchema.d.ts} +0 -26
- package/esm/shared/{configShared.js → SharedWiggleConfigSchema.js} +1 -30
- package/{dist/shared/modelShared.d.ts → esm/shared/SharedWiggleMixin.d.ts} +22 -213
- package/esm/shared/{modelShared.js → SharedWiggleMixin.js} +16 -175
- package/esm/util.d.ts +1 -53
- package/esm/util.js +1 -139
- package/package.json +2 -4
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exports.stateModelFactory = stateModelFactory;
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const react_1 = require("react");
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const mobx_state_tree_1 = require("mobx-state-tree");
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const mobx_1 = require("mobx");
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const react_d3_axis_mod_1 = require("react-d3-axis-mod");
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const fast_deep_equal_1 = __importDefault(require("fast-deep-equal"));
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const util_1 = require("@jbrowse/core/util");
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const tracks_1 = require("@jbrowse/core/util/tracks");
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const stopToken_1 = require("@jbrowse/core/util/stopToken");
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const fast_deep_equal_1 = __importDefault(require("fast-deep-equal"));
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const mobx_state_tree_1 = require("mobx-state-tree");
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const react_d3_axis_mod_1 = require("react-d3-axis-mod");
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const SharedWiggleMixin_1 = __importDefault(require("../shared/SharedWiggleMixin"));
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const util_2 = require("../util");
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const randomColor = () => '#000000'.replaceAll('0', () => (~~(Math.random() * 16)).toString(16));
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const SetColorDialog = (0, react_1.lazy)(() => Promise.resolve().then(() => __importStar(require('../components/SetColorDialog'))));
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const Tooltip = (0, react_1.lazy)(() => Promise.resolve().then(() => __importStar(require('./components/Tooltip'))));
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const SetColorDialog = (0, react_1.lazy)(() => Promise.resolve().then(() => __importStar(require('./components/SetColorDialog'))));
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const rendererTypes = new Map([
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['xyplot', 'MultiXYPlotRenderer'],
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['multirowxy', 'MultiRowXYPlotRenderer'],
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/**
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* #stateModel MultiLinearWiggleDisplay
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* extends
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* - [SharedWiggleMixin](../sharedwigglemixin)
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*/
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* #property
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.compose('MultiLinearWiggleDisplay', (0, SharedWiggleMixin_1.default)(configSchema), mobx_state_tree_1.types.model({
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type: mobx_state_tree_1.types.literal('MultiLinearWiggleDisplay'),
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/**
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*/
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layout: mobx_state_tree_1.types.optional(mobx_state_tree_1.types.frozen(), []),
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}))
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.volatile(() => ({
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sourcesLoadingStopToken: undefined,
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featureUnderMouseVolatile: undefined,
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sourcesVolatile: undefined,
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}))
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.actions(self => ({
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setSourcesLoading(str) {
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if (self.sourcesLoadingStopToken) {
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(0, stopToken_1.stopStopToken)(self.sourcesLoadingStopToken);
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}
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self.sourcesLoadingStopToken = str;
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},
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setLayout(layout) {
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clearLayout() {
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self.layout = [];
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},
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setSources(sources) {
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if (!(0, fast_deep_equal_1.default)(sources, self.sourcesVolatile)) {
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self.sourcesVolatile = sources;
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}
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*/
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setFeatureUnderMouse(f) {
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},
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get TooltipComponent() {
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get rendererTypeName() {
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const rendererType = rendererTypes.get(name);
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}))
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.views(self => ({
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/**
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get needsScalebar() {
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self.rendererTypeName === 'MultiRowXYPlotRenderer' ||
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self.rendererTypeName === 'MultiLineRenderer' ||
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self.rendererTypeName === 'MultiRowLineRenderer');
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* #getter
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*/
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get needsFullHeightScalebar() {
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return (self.rendererTypeName === 'MultiXYPlotRenderer' ||
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self.rendererTypeName === 'MultiLineRenderer');
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},
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/**
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* #getter
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*/
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get isMultiRow() {
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return (self.rendererTypeName === 'MultiRowXYPlotRenderer' ||
|
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self.rendererTypeName === 'MultiRowLineRenderer' ||
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self.rendererTypeName === 'MultiDensityRenderer');
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},
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/**
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* can be used to give it a "color scale" like a R heatmap, not
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* implemented like this yet but flag can be used for this
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*/
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get needsCustomLegend() {
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return self.rendererTypeName === 'MultiDensityRenderer';
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},
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@@ -163,27 +119,13 @@ function stateModelFactory(pluginManager, configSchema) {
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return (self.rendererTypeName === 'MultiXYPlotRenderer' ||
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self.rendererTypeName === 'MultiRowXYPlotRenderer');
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},
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/**
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* the multirowxy and multiline don't need to use colors on the legend
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* boxes since their track is drawn with the color. sort of a stylistic
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* choice
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*/
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get renderColorBoxes() {
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self.rendererTypeName === 'MultiRowXYPlotRenderer');
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},
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/**
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* positions multi-row below the tracklabel even if using overlap
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* tracklabels for everything else
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*/
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get prefersOffset() {
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return this.isMultiRow;
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},
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/**
|
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* #getter
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*/
|
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get sources() {
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var _a;
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const sources = Object.fromEntries(((_a = self.sourcesVolatile) === null || _a === void 0 ? void 0 : _a.map(s => [s.name, s])) || []);
|
|
@@ -197,129 +139,116 @@ function stateModelFactory(pluginManager, configSchema) {
|
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(!this.isMultiRow ? colors_1.set1[i] || randomColor() : 'blue'),
|
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|
}));
|
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},
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get quantitativeStatsReady() {
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|
+
const view = (0, util_1.getContainingView)(self);
|
|
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|
+
return (view.initialized && self.statsReadyAndRegionNotTooLarge && !self.error);
|
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+
},
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}))
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.views(self => ({
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/**
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|
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* #getter
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|
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*/
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get rowHeight() {
|
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|
const { sources, height, isMultiRow } = self;
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|
return isMultiRow ? height / ((sources === null || sources === void 0 ? void 0 : sources.length) || 1) : height;
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|
},
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|
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/**
|
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|
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|
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|
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*/
|
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212
152
|
get rowHeightTooSmallForScalebar() {
|
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213
153
|
return this.rowHeight < 70;
|
|
214
154
|
},
|
|
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|
-
/**
|
|
216
|
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* #getter
|
|
217
|
-
*/
|
|
218
155
|
get useMinimalTicks() {
|
|
219
156
|
return ((0, configuration_1.getConf)(self, 'minimalTicks') || this.rowHeightTooSmallForScalebar);
|
|
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157
|
},
|
|
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|
-
}))
|
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|
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.views(self => ({
|
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|
-
/**
|
|
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|
-
* #getter
|
|
225
|
-
*/
|
|
226
|
-
get ticks() {
|
|
227
|
-
const { scaleType, domain, isMultiRow, rowHeight, useMinimalTicks } = self;
|
|
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|
-
if (!domain) {
|
|
229
|
-
return undefined;
|
|
230
|
-
}
|
|
231
|
-
const offset = isMultiRow ? 0 : util_2.YSCALEBAR_LABEL_OFFSET;
|
|
232
|
-
const ticks = (0, react_d3_axis_mod_1.axisPropsFromTickScale)((0, util_2.getScale)({
|
|
233
|
-
scaleType,
|
|
234
|
-
domain,
|
|
235
|
-
range: [rowHeight - offset, offset],
|
|
236
|
-
inverted: (0, configuration_1.getConf)(self, 'inverted'),
|
|
237
|
-
}), 4);
|
|
238
|
-
return useMinimalTicks ? { ...ticks, values: domain } : ticks;
|
|
239
|
-
},
|
|
240
|
-
/**
|
|
241
|
-
* #getter
|
|
242
|
-
*/
|
|
243
|
-
get colors() {
|
|
244
|
-
return [
|
|
245
|
-
'red',
|
|
246
|
-
'blue',
|
|
247
|
-
'green',
|
|
248
|
-
'orange',
|
|
249
|
-
'purple',
|
|
250
|
-
'cyan',
|
|
251
|
-
'pink',
|
|
252
|
-
'darkblue',
|
|
253
|
-
'darkred',
|
|
254
|
-
'pink',
|
|
255
|
-
];
|
|
256
|
-
},
|
|
257
158
|
}))
|
|
258
159
|
.views(self => {
|
|
259
160
|
const { renderProps: superRenderProps } = self;
|
|
260
161
|
return {
|
|
261
|
-
|
|
262
|
-
* #method
|
|
263
|
-
*/
|
|
264
|
-
renderProps() {
|
|
162
|
+
adapterProps() {
|
|
265
163
|
const superProps = superRenderProps();
|
|
266
|
-
const { displayCrossHatches, filters, height, resolution, rpcDriverName, scaleOpts, stats, sources, ticks, rendererConfig: config, } = self;
|
|
267
164
|
return {
|
|
268
165
|
...superProps,
|
|
269
|
-
notReady: superProps.notReady || !sources || !stats,
|
|
270
166
|
displayModel: self,
|
|
271
|
-
config,
|
|
272
|
-
|
|
273
|
-
|
|
274
|
-
|
|
275
|
-
|
|
276
|
-
rpcDriverName,
|
|
277
|
-
scaleOpts,
|
|
278
|
-
sources,
|
|
279
|
-
ticks,
|
|
280
|
-
onMouseMove: (_, f) => {
|
|
281
|
-
self.setFeatureUnderMouse(f);
|
|
282
|
-
},
|
|
283
|
-
onMouseLeave: () => {
|
|
284
|
-
self.setFeatureUnderMouse(undefined);
|
|
285
|
-
},
|
|
167
|
+
config: self.rendererConfig,
|
|
168
|
+
filters: self.filters,
|
|
169
|
+
resolution: self.resolution,
|
|
170
|
+
rpcDriverName: self.rpcDriverName,
|
|
171
|
+
sources: self.sources,
|
|
286
172
|
};
|
|
287
173
|
},
|
|
288
|
-
|
|
289
|
-
|
|
290
|
-
|
|
291
|
-
|
|
292
|
-
|
|
174
|
+
get ticks() {
|
|
175
|
+
const { scaleType, domain, isMultiRow, rowHeight, useMinimalTicks } = self;
|
|
176
|
+
if (!domain) {
|
|
177
|
+
return undefined;
|
|
178
|
+
}
|
|
179
|
+
const offset = isMultiRow ? 0 : util_2.YSCALEBAR_LABEL_OFFSET;
|
|
180
|
+
const ticks = (0, react_d3_axis_mod_1.axisPropsFromTickScale)((0, util_2.getScale)({
|
|
181
|
+
scaleType,
|
|
182
|
+
domain,
|
|
183
|
+
range: [rowHeight - offset, offset],
|
|
184
|
+
inverted: (0, configuration_1.getConf)(self, 'inverted'),
|
|
185
|
+
}), 4);
|
|
186
|
+
return useMinimalTicks ? { ...ticks, values: domain } : ticks;
|
|
293
187
|
},
|
|
294
|
-
|
|
295
|
-
|
|
296
|
-
|
|
297
|
-
|
|
298
|
-
|
|
188
|
+
get colors() {
|
|
189
|
+
return [
|
|
190
|
+
'red',
|
|
191
|
+
'blue',
|
|
192
|
+
'green',
|
|
193
|
+
'orange',
|
|
194
|
+
'purple',
|
|
195
|
+
'cyan',
|
|
196
|
+
'pink',
|
|
197
|
+
'darkblue',
|
|
198
|
+
'darkred',
|
|
199
|
+
'pink',
|
|
200
|
+
];
|
|
299
201
|
},
|
|
300
|
-
|
|
301
|
-
|
|
302
|
-
|
|
303
|
-
|
|
304
|
-
if (self.filled) {
|
|
305
|
-
return 0;
|
|
306
|
-
}
|
|
307
|
-
else if (self.minSize === 1) {
|
|
308
|
-
return 1;
|
|
309
|
-
}
|
|
310
|
-
else {
|
|
311
|
-
return 2;
|
|
312
|
-
}
|
|
202
|
+
get quantitativeStatsRelevantToCurrentZoom() {
|
|
203
|
+
var _a;
|
|
204
|
+
const view = (0, util_1.getContainingView)(self);
|
|
205
|
+
return ((_a = self.stats) === null || _a === void 0 ? void 0 : _a.currStatsBpPerPx) === view.bpPerPx;
|
|
313
206
|
},
|
|
314
207
|
};
|
|
315
208
|
})
|
|
209
|
+
.views(self => ({
|
|
210
|
+
renderProps() {
|
|
211
|
+
const superProps = self.adapterProps();
|
|
212
|
+
return {
|
|
213
|
+
...superProps,
|
|
214
|
+
notReady: superProps.notReady || !self.sources || !self.stats,
|
|
215
|
+
displayModel: self,
|
|
216
|
+
rpcDriverName: self.rpcDriverName,
|
|
217
|
+
displayCrossHatches: self.displayCrossHatches,
|
|
218
|
+
height: self.height,
|
|
219
|
+
ticks: self.ticks,
|
|
220
|
+
stats: self.stats,
|
|
221
|
+
scaleOpts: self.scaleOpts,
|
|
222
|
+
onMouseMove: (_, f) => {
|
|
223
|
+
self.setFeatureUnderMouse(f);
|
|
224
|
+
},
|
|
225
|
+
onMouseLeave: () => {
|
|
226
|
+
self.setFeatureUnderMouse(undefined);
|
|
227
|
+
},
|
|
228
|
+
};
|
|
229
|
+
},
|
|
230
|
+
get hasResolution() {
|
|
231
|
+
return self.adapterCapabilities.includes('hasResolution');
|
|
232
|
+
},
|
|
233
|
+
get hasGlobalStats() {
|
|
234
|
+
return self.adapterCapabilities.includes('hasGlobalStats');
|
|
235
|
+
},
|
|
236
|
+
get fillSetting() {
|
|
237
|
+
if (self.filled) {
|
|
238
|
+
return 0;
|
|
239
|
+
}
|
|
240
|
+
else if (self.minSize === 1) {
|
|
241
|
+
return 1;
|
|
242
|
+
}
|
|
243
|
+
else {
|
|
244
|
+
return 2;
|
|
245
|
+
}
|
|
246
|
+
},
|
|
247
|
+
}))
|
|
316
248
|
.views(self => {
|
|
317
249
|
const { trackMenuItems: superTrackMenuItems } = self;
|
|
318
250
|
const hasRenderings = (0, configuration_1.getConf)(self, 'defaultRendering');
|
|
319
251
|
return {
|
|
320
|
-
/**
|
|
321
|
-
* #method
|
|
322
|
-
*/
|
|
323
252
|
trackMenuItems() {
|
|
324
253
|
return [
|
|
325
254
|
...superTrackMenuItems(),
|
|
@@ -392,28 +321,24 @@ function stateModelFactory(pluginManager, configSchema) {
|
|
|
392
321
|
const { renderSvg: superRenderSvg } = self;
|
|
393
322
|
return {
|
|
394
323
|
afterAttach() {
|
|
395
|
-
// eslint-disable-next-line @typescript-eslint/no-floating-promises
|
|
396
324
|
;
|
|
397
325
|
(async () => {
|
|
398
|
-
|
|
399
|
-
|
|
400
|
-
|
|
401
|
-
|
|
402
|
-
|
|
403
|
-
|
|
404
|
-
|
|
405
|
-
|
|
406
|
-
|
|
407
|
-
}));
|
|
326
|
+
try {
|
|
327
|
+
const [{ getMultiWiggleSourcesAutorun }, { getQuantitativeStatsAutorun },] = await Promise.all([
|
|
328
|
+
Promise.resolve().then(() => __importStar(require('../getMultiWiggleSourcesAutorun'))),
|
|
329
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+
Promise.resolve().then(() => __importStar(require('../getQuantitativeStatsAutorun'))),
|
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+
]);
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+
getQuantitativeStatsAutorun(self);
|
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getMultiWiggleSourcesAutorun(self);
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}
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+
catch (e) {
|
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335
|
if ((0, mobx_state_tree_1.isAlive)(self)) {
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-
|
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console.error(e);
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(0, util_1.getSession)(self).notifyError(`${e}`, e);
|
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}
|
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-
}
|
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+
}
|
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340
|
})();
|
|
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},
|
|
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|
-
/**
|
|
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|
-
* #action
|
|
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-
*/
|
|
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|
async renderSvg(opts) {
|
|
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343
|
const { renderSvg } = await Promise.resolve().then(() => __importStar(require('./renderSvg')));
|
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return renderSvg(self, opts, superRenderSvg);
|
|
@@ -1,4 +1,4 @@
|
|
|
1
1
|
import React from 'react';
|
|
2
|
-
import {
|
|
3
|
-
import {
|
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2
|
+
import type { WiggleDisplayModel } from './model';
|
|
3
|
+
import type { ExportSvgDisplayOptions } from '@jbrowse/plugin-linear-genome-view';
|
|
4
4
|
export declare function renderSvg(self: WiggleDisplayModel, opts: ExportSvgDisplayOptions, superRenderSvg: (opts: ExportSvgDisplayOptions) => Promise<React.ReactNode>): Promise<React.JSX.Element>;
|
|
@@ -7,12 +7,12 @@ exports.renderSvg = renderSvg;
|
|
|
7
7
|
const react_1 = __importDefault(require("react"));
|
|
8
8
|
const util_1 = require("@jbrowse/core/util");
|
|
9
9
|
const mobx_1 = require("mobx");
|
|
10
|
-
const YScaleBars_1 = __importDefault(require("
|
|
10
|
+
const YScaleBars_1 = __importDefault(require("./components/YScaleBars"));
|
|
11
11
|
async function renderSvg(self, opts, superRenderSvg) {
|
|
12
12
|
await (0, mobx_1.when)(() => !!self.stats && !!self.regionCannotBeRenderedText);
|
|
13
13
|
const { offsetPx } = (0, util_1.getContainingView)(self);
|
|
14
14
|
return (react_1.default.createElement(react_1.default.Fragment, null,
|
|
15
|
-
react_1.default.createElement("g",
|
|
15
|
+
react_1.default.createElement("g", null, await superRenderSvg(opts)),
|
|
16
16
|
react_1.default.createElement("g", { transform: `translate(${Math.max(-offsetPx, 0)})` },
|
|
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17
|
react_1.default.createElement(YScaleBars_1.default, { model: self, orientation: "left", exportSVG: true }))));
|
|
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18
|
}
|
|
@@ -1,4 +1,4 @@
|
|
|
1
|
-
import PluginManager from '@jbrowse/core/PluginManager';
|
|
1
|
+
import type PluginManager from '@jbrowse/core/PluginManager';
|
|
2
2
|
declare const configSchema: (pluginManager: PluginManager) => import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{}, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
|
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3
3
|
name: {
|
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4
4
|
description: string;
|
|
@@ -2,15 +2,9 @@
|
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2
2
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
3
3
|
const configuration_1 = require("@jbrowse/core/configuration");
|
|
4
4
|
const models_1 = require("@jbrowse/core/pluggableElementTypes/models");
|
|
5
|
-
|
|
6
|
-
* #config MultiQuantitativeTrack
|
|
7
|
-
*/
|
|
8
|
-
function x() { } // eslint-disable-line @typescript-eslint/no-unused-vars
|
|
5
|
+
function x() { }
|
|
9
6
|
const configSchema = (pluginManager) => {
|
|
10
7
|
return (0, configuration_1.ConfigurationSchema)('MultiQuantitativeTrack', {}, {
|
|
11
|
-
/**
|
|
12
|
-
* #baseConfiguration
|
|
13
|
-
*/
|
|
14
8
|
baseConfiguration: (0, models_1.createBaseTrackConfig)(pluginManager),
|
|
15
9
|
});
|
|
16
10
|
};
|
|
@@ -1,2 +1,2 @@
|
|
|
1
|
-
import PluginManager from '@jbrowse/core/PluginManager';
|
|
1
|
+
import type PluginManager from '@jbrowse/core/PluginManager';
|
|
2
2
|
export default function MultiQuantitativeTrackF(pluginManager: PluginManager): void;
|
|
@@ -4,8 +4,8 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
|
|
|
4
4
|
};
|
|
5
5
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
6
6
|
exports.default = MultiQuantitativeTrackF;
|
|
7
|
-
const models_1 = require("@jbrowse/core/pluggableElementTypes/models");
|
|
8
7
|
const TrackType_1 = __importDefault(require("@jbrowse/core/pluggableElementTypes/TrackType"));
|
|
8
|
+
const models_1 = require("@jbrowse/core/pluggableElementTypes/models");
|
|
9
9
|
const configSchema_1 = __importDefault(require("./configSchema"));
|
|
10
10
|
function MultiQuantitativeTrackF(pluginManager) {
|
|
11
11
|
pluginManager.addTrackType(() => {
|
|
@@ -1,5 +1,6 @@
|
|
|
1
|
-
import
|
|
2
|
-
import
|
|
1
|
+
import WiggleBaseRenderer from '../WiggleBaseRenderer';
|
|
2
|
+
import type { MultiRenderArgsDeserialized as MultiArgs } from '../WiggleBaseRenderer';
|
|
3
|
+
import type { Feature } from '@jbrowse/core/util';
|
|
3
4
|
export default class MultiRowLineRenderer extends WiggleBaseRenderer {
|
|
4
5
|
draw(ctx: CanvasRenderingContext2D, props: MultiArgs): Promise<{
|
|
5
6
|
reducedFeatures: Feature[];
|
|
@@ -4,10 +4,9 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
|
|
|
4
4
|
};
|
|
5
5
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
6
6
|
const util_1 = require("@jbrowse/core/util");
|
|
7
|
-
const drawLine_1 = require("../drawLine");
|
|
8
7
|
const WiggleBaseRenderer_1 = __importDefault(require("../WiggleBaseRenderer"));
|
|
8
|
+
const drawLine_1 = require("../drawLine");
|
|
9
9
|
class MultiRowLineRenderer extends WiggleBaseRenderer_1.default {
|
|
10
|
-
// @ts-expect-error
|
|
11
10
|
async draw(ctx, props) {
|
|
12
11
|
const { bpPerPx, sources, regions, features } = props;
|
|
13
12
|
const region = regions[0];
|
|
@@ -1,15 +1,9 @@
|
|
|
1
1
|
declare const configSchema: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
|
|
2
|
-
/**
|
|
3
|
-
* #slot
|
|
4
|
-
*/
|
|
5
2
|
displayCrossHatches: {
|
|
6
3
|
type: string;
|
|
7
4
|
description: string;
|
|
8
5
|
defaultValue: boolean;
|
|
9
6
|
};
|
|
10
|
-
/**
|
|
11
|
-
* #slot
|
|
12
|
-
*/
|
|
13
7
|
summaryScoreMode: {
|
|
14
8
|
type: string;
|
|
15
9
|
model: import("mobx-state-tree").ISimpleType<string>;
|
|
@@ -3,25 +3,16 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
|
|
|
3
3
|
return (mod && mod.__esModule) ? mod : { "default": mod };
|
|
4
4
|
};
|
|
5
5
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
6
|
-
const mobx_state_tree_1 = require("mobx-state-tree");
|
|
7
6
|
const configuration_1 = require("@jbrowse/core/configuration");
|
|
7
|
+
const mobx_state_tree_1 = require("mobx-state-tree");
|
|
8
8
|
const configSchema_1 = __importDefault(require("../configSchema"));
|
|
9
|
-
|
|
10
|
-
* #config MultiRowLineRenderer
|
|
11
|
-
*/
|
|
12
|
-
function x() { } // eslint-disable-line @typescript-eslint/no-unused-vars
|
|
9
|
+
function x() { }
|
|
13
10
|
const configSchema = (0, configuration_1.ConfigurationSchema)('MultiRowLineRenderer', {
|
|
14
|
-
/**
|
|
15
|
-
* #slot
|
|
16
|
-
*/
|
|
17
11
|
displayCrossHatches: {
|
|
18
12
|
type: 'boolean',
|
|
19
13
|
description: 'choose to draw cross hatches (sideways lines)',
|
|
20
14
|
defaultValue: false,
|
|
21
15
|
},
|
|
22
|
-
/**
|
|
23
|
-
* #slot
|
|
24
|
-
*/
|
|
25
16
|
summaryScoreMode: {
|
|
26
17
|
type: 'stringEnum',
|
|
27
18
|
model: mobx_state_tree_1.types.enumeration('Score type', ['max', 'min', 'avg', 'whiskers']),
|
|
@@ -29,9 +20,6 @@ const configSchema = (0, configuration_1.ConfigurationSchema)('MultiRowLineRende
|
|
|
29
20
|
defaultValue: 'avg',
|
|
30
21
|
},
|
|
31
22
|
}, {
|
|
32
|
-
/**
|
|
33
|
-
* #baseConfiguration
|
|
34
|
-
*/
|
|
35
23
|
baseConfiguration: configSchema_1.default,
|
|
36
24
|
explicitlyTyped: true,
|
|
37
25
|
});
|
|
@@ -1,2 +1,2 @@
|
|
|
1
|
-
import PluginManager from '@jbrowse/core/PluginManager';
|
|
1
|
+
import type PluginManager from '@jbrowse/core/PluginManager';
|
|
2
2
|
export default function MultiRowLineRendererF(pluginManager: PluginManager): void;
|
|
@@ -1,5 +1,6 @@
|
|
|
1
|
-
import
|
|
2
|
-
import
|
|
1
|
+
import WiggleBaseRenderer from '../WiggleBaseRenderer';
|
|
2
|
+
import type { MultiRenderArgsDeserialized as MultiArgs } from '../WiggleBaseRenderer';
|
|
3
|
+
import type { Feature } from '@jbrowse/core/util';
|
|
3
4
|
export default class MultiXYPlotRenderer extends WiggleBaseRenderer {
|
|
4
5
|
draw(ctx: CanvasRenderingContext2D, props: MultiArgs): Promise<{
|
|
5
6
|
reducedFeatures: Feature[];
|
|
@@ -4,10 +4,9 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
|
|
|
4
4
|
};
|
|
5
5
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
6
6
|
const util_1 = require("@jbrowse/core/util");
|
|
7
|
-
const drawXY_1 = require("../drawXY");
|
|
8
7
|
const WiggleBaseRenderer_1 = __importDefault(require("../WiggleBaseRenderer"));
|
|
8
|
+
const drawXY_1 = require("../drawXY");
|
|
9
9
|
class MultiXYPlotRenderer extends WiggleBaseRenderer_1.default {
|
|
10
|
-
// @ts-expect-error
|
|
11
10
|
async draw(ctx, props) {
|
|
12
11
|
const { bpPerPx, sources, regions, features } = props;
|
|
13
12
|
const region = regions[0];
|
|
@@ -1,31 +1,19 @@
|
|
|
1
1
|
declare const configSchema: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
|
|
2
|
-
/**
|
|
3
|
-
* #slot
|
|
4
|
-
*/
|
|
5
2
|
filled: {
|
|
6
3
|
type: string;
|
|
7
4
|
defaultValue: boolean;
|
|
8
5
|
};
|
|
9
|
-
/**
|
|
10
|
-
* #slot
|
|
11
|
-
*/
|
|
12
6
|
displayCrossHatches: {
|
|
13
7
|
type: string;
|
|
14
8
|
description: string;
|
|
15
9
|
defaultValue: boolean;
|
|
16
10
|
};
|
|
17
|
-
/**
|
|
18
|
-
* #slot
|
|
19
|
-
*/
|
|
20
11
|
summaryScoreMode: {
|
|
21
12
|
type: string;
|
|
22
13
|
model: import("mobx-state-tree").ISimpleType<string>;
|
|
23
14
|
description: string;
|
|
24
15
|
defaultValue: string;
|
|
25
16
|
};
|
|
26
|
-
/**
|
|
27
|
-
* #slot
|
|
28
|
-
*/
|
|
29
17
|
minSize: {
|
|
30
18
|
type: string;
|
|
31
19
|
defaultValue: number;
|