@jbrowse/plugin-wiggle 2.16.1 → 2.18.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (284) hide show
  1. package/dist/BigWigAdapter/BigWigAdapter.d.ts +4 -3
  2. package/dist/BigWigAdapter/BigWigAdapter.js +3 -8
  3. package/dist/BigWigAdapter/configSchema.d.ts +0 -9
  4. package/dist/BigWigAdapter/configSchema.js +1 -13
  5. package/dist/BigWigAdapter/index.d.ts +1 -1
  6. package/dist/CreateMultiWiggleExtension/ConfirmDialog.d.ts +1 -1
  7. package/dist/CreateMultiWiggleExtension/ConfirmDialog.js +2 -2
  8. package/dist/CreateMultiWiggleExtension/index.d.ts +1 -1
  9. package/dist/CreateMultiWiggleExtension/index.js +26 -26
  10. package/dist/DensityRenderer/DensityRenderer.d.ts +2 -1
  11. package/dist/DensityRenderer/DensityRenderer.js +1 -1
  12. package/dist/DensityRenderer/configSchema.js +1 -7
  13. package/dist/DensityRenderer/index.d.ts +1 -1
  14. package/dist/DensityRenderer/index.js +1 -1
  15. package/dist/LinePlotRenderer/LinePlotRenderer.d.ts +3 -2
  16. package/dist/LinePlotRenderer/LinePlotRenderer.js +1 -1
  17. package/dist/LinePlotRenderer/configSchema.d.ts +0 -3
  18. package/dist/LinePlotRenderer/configSchema.js +1 -10
  19. package/dist/LinePlotRenderer/index.d.ts +1 -1
  20. package/dist/LinearWiggleDisplay/components/SetColorDialog.js +2 -2
  21. package/dist/LinearWiggleDisplay/components/Tooltip.d.ts +2 -2
  22. package/dist/LinearWiggleDisplay/components/Tooltip.js +1 -2
  23. package/dist/LinearWiggleDisplay/components/WiggleDisplayComponent.d.ts +1 -1
  24. package/dist/LinearWiggleDisplay/components/WiggleDisplayComponent.js +2 -2
  25. package/dist/LinearWiggleDisplay/{models/configSchema.d.ts → configSchema.d.ts} +1 -12
  26. package/dist/LinearWiggleDisplay/{models/configSchema.js → configSchema.js} +2 -17
  27. package/dist/LinearWiggleDisplay/index.d.ts +2 -2
  28. package/dist/LinearWiggleDisplay/index.js +4 -4
  29. package/{esm/LinearWiggleDisplay/models → dist/LinearWiggleDisplay}/model.d.ts +21 -63
  30. package/dist/LinearWiggleDisplay/{models/model.js → model.js} +66 -80
  31. package/dist/LinearWiggleDisplay/{models/renderSvg.d.ts → renderSvg.d.ts} +2 -2
  32. package/dist/LinearWiggleDisplay/{models/renderSvg.js → renderSvg.js} +2 -2
  33. package/dist/MultiDensityRenderer/MultiDensityRenderer.d.ts +4 -3
  34. package/dist/MultiDensityRenderer/MultiDensityRenderer.js +2 -3
  35. package/dist/MultiDensityRenderer/configSchema.js +1 -7
  36. package/dist/MultiDensityRenderer/index.d.ts +1 -1
  37. package/dist/MultiLineRenderer/MultiLineRenderer.d.ts +3 -2
  38. package/dist/MultiLineRenderer/MultiLineRenderer.js +1 -2
  39. package/dist/MultiLineRenderer/configSchema.d.ts +0 -6
  40. package/dist/MultiLineRenderer/configSchema.js +1 -13
  41. package/dist/MultiLineRenderer/index.d.ts +1 -1
  42. package/dist/MultiLinearWiggleDisplay/components/ColorLegend.d.ts +1 -1
  43. package/dist/MultiLinearWiggleDisplay/components/ColorLegend.js +0 -1
  44. package/dist/MultiLinearWiggleDisplay/components/DraggableDialog.d.ts +1 -1
  45. package/dist/MultiLinearWiggleDisplay/components/DraggableDialog.js +3 -7
  46. package/dist/MultiLinearWiggleDisplay/components/RectBg.js +1 -1
  47. package/dist/MultiLinearWiggleDisplay/components/ScoreLegend.d.ts +1 -1
  48. package/dist/MultiLinearWiggleDisplay/components/SetColorDialog.d.ts +1 -1
  49. package/dist/MultiLinearWiggleDisplay/components/SetColorDialog.js +3 -5
  50. package/dist/MultiLinearWiggleDisplay/components/SourcesGrid.d.ts +1 -1
  51. package/dist/MultiLinearWiggleDisplay/components/SourcesGrid.js +15 -26
  52. package/dist/MultiLinearWiggleDisplay/components/Tooltip.d.ts +3 -3
  53. package/dist/MultiLinearWiggleDisplay/components/Tooltip.js +1 -2
  54. package/dist/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.d.ts +1 -1
  55. package/dist/MultiLinearWiggleDisplay/components/YScaleBars.d.ts +1 -1
  56. package/dist/MultiLinearWiggleDisplay/components/YScaleBars.js +1 -1
  57. package/dist/MultiLinearWiggleDisplay/components/util.d.ts +1 -1
  58. package/dist/MultiLinearWiggleDisplay/components/util.js +1 -1
  59. package/dist/MultiLinearWiggleDisplay/{models/configSchema.d.ts → configSchema.d.ts} +1 -10
  60. package/dist/MultiLinearWiggleDisplay/{models/configSchema.js → configSchema.js} +3 -21
  61. package/dist/MultiLinearWiggleDisplay/index.d.ts +1 -1
  62. package/dist/MultiLinearWiggleDisplay/index.js +3 -3
  63. package/dist/MultiLinearWiggleDisplay/{models/model.d.ts → model.d.ts} +25 -129
  64. package/dist/MultiLinearWiggleDisplay/{models/model.js → model.js} +108 -183
  65. package/dist/MultiLinearWiggleDisplay/{models/renderSvg.d.ts → renderSvg.d.ts} +2 -2
  66. package/dist/MultiLinearWiggleDisplay/{models/renderSvg.js → renderSvg.js} +2 -2
  67. package/dist/MultiQuantitativeTrack/configSchema.d.ts +1 -1
  68. package/dist/MultiQuantitativeTrack/configSchema.js +1 -7
  69. package/dist/MultiQuantitativeTrack/index.d.ts +1 -1
  70. package/dist/MultiQuantitativeTrack/index.js +1 -1
  71. package/dist/MultiRowLineRenderer/MultiRowLineRenderer.d.ts +3 -2
  72. package/dist/MultiRowLineRenderer/MultiRowLineRenderer.js +1 -2
  73. package/dist/MultiRowLineRenderer/configSchema.d.ts +0 -6
  74. package/dist/MultiRowLineRenderer/configSchema.js +2 -14
  75. package/dist/MultiRowLineRenderer/index.d.ts +1 -1
  76. package/dist/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.d.ts +3 -2
  77. package/dist/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.js +1 -2
  78. package/dist/MultiRowXYPlotRenderer/configSchema.d.ts +0 -12
  79. package/dist/MultiRowXYPlotRenderer/configSchema.js +3 -21
  80. package/dist/MultiRowXYPlotRenderer/index.d.ts +1 -1
  81. package/dist/MultiWiggleAdapter/MultiWiggleAdapter.d.ts +5 -4
  82. package/dist/MultiWiggleAdapter/MultiWiggleAdapter.js +12 -15
  83. package/dist/MultiWiggleAdapter/configSchema.d.ts +0 -6
  84. package/dist/MultiWiggleAdapter/configSchema.js +1 -10
  85. package/dist/MultiWiggleAdapter/index.d.ts +1 -1
  86. package/dist/MultiWiggleAdapter/index.js +1 -1
  87. package/dist/MultiWiggleAddTrackWorkflow/AddTrackWorkflow.d.ts +1 -1
  88. package/dist/MultiWiggleAddTrackWorkflow/AddTrackWorkflow.js +2 -4
  89. package/dist/MultiWiggleAddTrackWorkflow/index.d.ts +1 -1
  90. package/dist/MultiWiggleAddTrackWorkflow/index.js +1 -2
  91. package/dist/MultiWiggleRendering.d.ts +3 -3
  92. package/dist/MultiWiggleRendering.js +2 -2
  93. package/dist/MultiXYPlotRenderer/MultiXYPlotRenderer.d.ts +3 -2
  94. package/dist/MultiXYPlotRenderer/MultiXYPlotRenderer.js +1 -2
  95. package/dist/MultiXYPlotRenderer/configSchema.d.ts +0 -12
  96. package/dist/MultiXYPlotRenderer/configSchema.js +2 -20
  97. package/dist/MultiXYPlotRenderer/index.d.ts +1 -1
  98. package/dist/QuantitativeTrack/configSchema.d.ts +1 -1
  99. package/dist/QuantitativeTrack/configSchema.js +1 -7
  100. package/dist/QuantitativeTrack/index.d.ts +1 -1
  101. package/dist/QuantitativeTrack/index.js +1 -1
  102. package/dist/Tooltip.d.ts +1 -1
  103. package/dist/Tooltip.js +1 -2
  104. package/dist/WiggleBaseRenderer.d.ts +6 -9
  105. package/dist/WiggleBaseRenderer.js +0 -1
  106. package/dist/WiggleRPC/MultiWiggleGetSources.d.ts +5 -12
  107. package/dist/WiggleRPC/MultiWiggleGetSources.js +2 -29
  108. package/dist/WiggleRPC/WiggleGetGlobalQuantitativeStats.d.ts +5 -7
  109. package/dist/WiggleRPC/WiggleGetGlobalQuantitativeStats.js +2 -15
  110. package/dist/WiggleRPC/WiggleGetMultiRegionQuantitativeStats.d.ts +4 -11
  111. package/dist/WiggleRPC/WiggleGetMultiRegionQuantitativeStats.js +2 -29
  112. package/dist/WiggleRendering.d.ts +2 -2
  113. package/dist/WiggleRendering.js +1 -3
  114. package/dist/XYPlotRenderer/XYPlotRenderer.d.ts +3 -2
  115. package/dist/XYPlotRenderer/XYPlotRenderer.js +3 -5
  116. package/dist/XYPlotRenderer/configSchema.d.ts +0 -12
  117. package/dist/XYPlotRenderer/configSchema.js +3 -21
  118. package/dist/XYPlotRenderer/index.d.ts +1 -1
  119. package/dist/configSchema.d.ts +0 -18
  120. package/dist/configSchema.js +1 -23
  121. package/dist/drawDensity.d.ts +3 -3
  122. package/dist/drawDensity.js +0 -4
  123. package/dist/drawLine.d.ts +3 -3
  124. package/dist/drawLine.js +0 -5
  125. package/dist/drawXY.d.ts +4 -3
  126. package/dist/drawXY.js +28 -12
  127. package/dist/getMultiWiggleSourcesAutorun.d.ts +17 -0
  128. package/dist/getMultiWiggleSourcesAutorun.js +38 -0
  129. package/dist/getQuantitativeStats.d.ts +13 -0
  130. package/dist/getQuantitativeStats.js +70 -0
  131. package/dist/getQuantitativeStatsAutorun.d.ts +13 -0
  132. package/dist/getQuantitativeStatsAutorun.js +35 -0
  133. package/dist/index.d.ts +6 -6
  134. package/dist/index.js +21 -24
  135. package/dist/shared/SetMinMaxDialog.js +1 -1
  136. package/{esm/shared/configShared.d.ts → dist/shared/SharedWiggleConfigSchema.d.ts} +0 -26
  137. package/dist/shared/{configShared.js → SharedWiggleConfigSchema.js} +1 -30
  138. package/{esm/shared/modelShared.d.ts → dist/shared/SharedWiggleMixin.d.ts} +22 -213
  139. package/dist/shared/{modelShared.js → SharedWiggleMixin.js} +15 -174
  140. package/dist/util.d.ts +1 -53
  141. package/dist/util.js +1 -141
  142. package/esm/BigWigAdapter/BigWigAdapter.d.ts +4 -3
  143. package/esm/BigWigAdapter/BigWigAdapter.js +5 -10
  144. package/esm/BigWigAdapter/configSchema.d.ts +0 -9
  145. package/esm/BigWigAdapter/configSchema.js +1 -13
  146. package/esm/BigWigAdapter/index.d.ts +1 -1
  147. package/esm/CreateMultiWiggleExtension/ConfirmDialog.d.ts +1 -1
  148. package/esm/CreateMultiWiggleExtension/ConfirmDialog.js +2 -2
  149. package/esm/CreateMultiWiggleExtension/index.d.ts +1 -1
  150. package/esm/CreateMultiWiggleExtension/index.js +26 -26
  151. package/esm/DensityRenderer/DensityRenderer.d.ts +2 -1
  152. package/esm/DensityRenderer/DensityRenderer.js +1 -1
  153. package/esm/DensityRenderer/configSchema.js +1 -7
  154. package/esm/DensityRenderer/index.d.ts +1 -1
  155. package/esm/DensityRenderer/index.js +1 -1
  156. package/esm/LinePlotRenderer/LinePlotRenderer.d.ts +3 -2
  157. package/esm/LinePlotRenderer/LinePlotRenderer.js +1 -1
  158. package/esm/LinePlotRenderer/configSchema.d.ts +0 -3
  159. package/esm/LinePlotRenderer/configSchema.js +1 -10
  160. package/esm/LinePlotRenderer/index.d.ts +1 -1
  161. package/esm/LinearWiggleDisplay/components/SetColorDialog.js +2 -2
  162. package/esm/LinearWiggleDisplay/components/Tooltip.d.ts +2 -2
  163. package/esm/LinearWiggleDisplay/components/Tooltip.js +1 -2
  164. package/esm/LinearWiggleDisplay/components/WiggleDisplayComponent.d.ts +1 -1
  165. package/esm/LinearWiggleDisplay/components/WiggleDisplayComponent.js +3 -3
  166. package/esm/LinearWiggleDisplay/{models/configSchema.d.ts → configSchema.d.ts} +1 -12
  167. package/esm/LinearWiggleDisplay/{models/configSchema.js → configSchema.js} +1 -16
  168. package/esm/LinearWiggleDisplay/index.d.ts +2 -2
  169. package/esm/LinearWiggleDisplay/index.js +4 -4
  170. package/{dist/LinearWiggleDisplay/models → esm/LinearWiggleDisplay}/model.d.ts +21 -63
  171. package/esm/LinearWiggleDisplay/{models/model.js → model.js} +67 -81
  172. package/esm/LinearWiggleDisplay/{models/renderSvg.d.ts → renderSvg.d.ts} +2 -2
  173. package/esm/LinearWiggleDisplay/{models/renderSvg.js → renderSvg.js} +2 -2
  174. package/esm/MultiDensityRenderer/MultiDensityRenderer.d.ts +4 -3
  175. package/esm/MultiDensityRenderer/MultiDensityRenderer.js +1 -2
  176. package/esm/MultiDensityRenderer/configSchema.js +1 -7
  177. package/esm/MultiDensityRenderer/index.d.ts +1 -1
  178. package/esm/MultiLineRenderer/MultiLineRenderer.d.ts +3 -2
  179. package/esm/MultiLineRenderer/MultiLineRenderer.js +1 -2
  180. package/esm/MultiLineRenderer/configSchema.d.ts +0 -6
  181. package/esm/MultiLineRenderer/configSchema.js +1 -13
  182. package/esm/MultiLineRenderer/index.d.ts +1 -1
  183. package/esm/MultiLinearWiggleDisplay/components/ColorLegend.d.ts +1 -1
  184. package/esm/MultiLinearWiggleDisplay/components/ColorLegend.js +0 -1
  185. package/esm/MultiLinearWiggleDisplay/components/DraggableDialog.d.ts +1 -1
  186. package/esm/MultiLinearWiggleDisplay/components/DraggableDialog.js +4 -8
  187. package/esm/MultiLinearWiggleDisplay/components/RectBg.js +1 -1
  188. package/esm/MultiLinearWiggleDisplay/components/ScoreLegend.d.ts +1 -1
  189. package/esm/MultiLinearWiggleDisplay/components/ScoreLegend.js +1 -1
  190. package/esm/MultiLinearWiggleDisplay/components/SetColorDialog.d.ts +1 -1
  191. package/esm/MultiLinearWiggleDisplay/components/SetColorDialog.js +4 -6
  192. package/esm/MultiLinearWiggleDisplay/components/SourcesGrid.d.ts +1 -1
  193. package/esm/MultiLinearWiggleDisplay/components/SourcesGrid.js +16 -27
  194. package/esm/MultiLinearWiggleDisplay/components/Tooltip.d.ts +3 -3
  195. package/esm/MultiLinearWiggleDisplay/components/Tooltip.js +1 -2
  196. package/esm/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.d.ts +1 -1
  197. package/esm/MultiLinearWiggleDisplay/components/YScaleBars.d.ts +1 -1
  198. package/esm/MultiLinearWiggleDisplay/components/YScaleBars.js +2 -2
  199. package/esm/MultiLinearWiggleDisplay/components/util.d.ts +1 -1
  200. package/esm/MultiLinearWiggleDisplay/components/util.js +1 -1
  201. package/esm/MultiLinearWiggleDisplay/{models/configSchema.d.ts → configSchema.d.ts} +1 -10
  202. package/esm/MultiLinearWiggleDisplay/{models/configSchema.js → configSchema.js} +2 -20
  203. package/esm/MultiLinearWiggleDisplay/index.d.ts +1 -1
  204. package/esm/MultiLinearWiggleDisplay/index.js +3 -3
  205. package/esm/MultiLinearWiggleDisplay/{models/model.d.ts → model.d.ts} +25 -129
  206. package/esm/MultiLinearWiggleDisplay/{models/model.js → model.js} +108 -183
  207. package/esm/MultiLinearWiggleDisplay/{models/renderSvg.d.ts → renderSvg.d.ts} +2 -2
  208. package/esm/MultiLinearWiggleDisplay/{models/renderSvg.js → renderSvg.js} +2 -2
  209. package/esm/MultiQuantitativeTrack/configSchema.d.ts +1 -1
  210. package/esm/MultiQuantitativeTrack/configSchema.js +1 -7
  211. package/esm/MultiQuantitativeTrack/index.d.ts +1 -1
  212. package/esm/MultiQuantitativeTrack/index.js +1 -1
  213. package/esm/MultiRowLineRenderer/MultiRowLineRenderer.d.ts +3 -2
  214. package/esm/MultiRowLineRenderer/MultiRowLineRenderer.js +1 -2
  215. package/esm/MultiRowLineRenderer/configSchema.d.ts +0 -6
  216. package/esm/MultiRowLineRenderer/configSchema.js +2 -14
  217. package/esm/MultiRowLineRenderer/index.d.ts +1 -1
  218. package/esm/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.d.ts +3 -2
  219. package/esm/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.js +1 -2
  220. package/esm/MultiRowXYPlotRenderer/configSchema.d.ts +0 -12
  221. package/esm/MultiRowXYPlotRenderer/configSchema.js +3 -21
  222. package/esm/MultiRowXYPlotRenderer/index.d.ts +1 -1
  223. package/esm/MultiWiggleAdapter/MultiWiggleAdapter.d.ts +5 -4
  224. package/esm/MultiWiggleAdapter/MultiWiggleAdapter.js +13 -16
  225. package/esm/MultiWiggleAdapter/configSchema.d.ts +0 -6
  226. package/esm/MultiWiggleAdapter/configSchema.js +1 -10
  227. package/esm/MultiWiggleAdapter/index.d.ts +1 -1
  228. package/esm/MultiWiggleAdapter/index.js +1 -1
  229. package/esm/MultiWiggleAddTrackWorkflow/AddTrackWorkflow.d.ts +1 -1
  230. package/esm/MultiWiggleAddTrackWorkflow/AddTrackWorkflow.js +2 -4
  231. package/esm/MultiWiggleAddTrackWorkflow/index.d.ts +1 -1
  232. package/esm/MultiWiggleAddTrackWorkflow/index.js +1 -2
  233. package/esm/MultiWiggleRendering.d.ts +3 -3
  234. package/esm/MultiWiggleRendering.js +2 -2
  235. package/esm/MultiXYPlotRenderer/MultiXYPlotRenderer.d.ts +3 -2
  236. package/esm/MultiXYPlotRenderer/MultiXYPlotRenderer.js +1 -2
  237. package/esm/MultiXYPlotRenderer/configSchema.d.ts +0 -12
  238. package/esm/MultiXYPlotRenderer/configSchema.js +2 -20
  239. package/esm/MultiXYPlotRenderer/index.d.ts +1 -1
  240. package/esm/QuantitativeTrack/configSchema.d.ts +1 -1
  241. package/esm/QuantitativeTrack/configSchema.js +1 -7
  242. package/esm/QuantitativeTrack/index.d.ts +1 -1
  243. package/esm/QuantitativeTrack/index.js +1 -1
  244. package/esm/Tooltip.d.ts +1 -1
  245. package/esm/Tooltip.js +1 -2
  246. package/esm/WiggleBaseRenderer.d.ts +6 -9
  247. package/esm/WiggleBaseRenderer.js +0 -1
  248. package/esm/WiggleRPC/MultiWiggleGetSources.d.ts +5 -12
  249. package/esm/WiggleRPC/MultiWiggleGetSources.js +2 -29
  250. package/esm/WiggleRPC/WiggleGetGlobalQuantitativeStats.d.ts +5 -7
  251. package/esm/WiggleRPC/WiggleGetGlobalQuantitativeStats.js +2 -15
  252. package/esm/WiggleRPC/WiggleGetMultiRegionQuantitativeStats.d.ts +4 -11
  253. package/esm/WiggleRPC/WiggleGetMultiRegionQuantitativeStats.js +2 -29
  254. package/esm/WiggleRendering.d.ts +2 -2
  255. package/esm/WiggleRendering.js +1 -3
  256. package/esm/XYPlotRenderer/XYPlotRenderer.d.ts +3 -2
  257. package/esm/XYPlotRenderer/XYPlotRenderer.js +3 -5
  258. package/esm/XYPlotRenderer/configSchema.d.ts +0 -12
  259. package/esm/XYPlotRenderer/configSchema.js +3 -21
  260. package/esm/XYPlotRenderer/index.d.ts +1 -1
  261. package/esm/configSchema.d.ts +0 -18
  262. package/esm/configSchema.js +1 -23
  263. package/esm/drawDensity.d.ts +3 -3
  264. package/esm/drawDensity.js +1 -5
  265. package/esm/drawLine.d.ts +3 -3
  266. package/esm/drawLine.js +1 -6
  267. package/esm/drawXY.d.ts +4 -3
  268. package/esm/drawXY.js +29 -13
  269. package/esm/getMultiWiggleSourcesAutorun.d.ts +17 -0
  270. package/esm/getMultiWiggleSourcesAutorun.js +35 -0
  271. package/esm/getQuantitativeStats.d.ts +13 -0
  272. package/esm/getQuantitativeStats.js +67 -0
  273. package/esm/getQuantitativeStatsAutorun.d.ts +13 -0
  274. package/esm/getQuantitativeStatsAutorun.js +32 -0
  275. package/esm/index.d.ts +6 -6
  276. package/esm/index.js +13 -16
  277. package/esm/shared/SetMinMaxDialog.js +1 -1
  278. package/{dist/shared/configShared.d.ts → esm/shared/SharedWiggleConfigSchema.d.ts} +0 -26
  279. package/esm/shared/{configShared.js → SharedWiggleConfigSchema.js} +1 -30
  280. package/{dist/shared/modelShared.d.ts → esm/shared/SharedWiggleMixin.d.ts} +22 -213
  281. package/esm/shared/{modelShared.js → SharedWiggleMixin.js} +16 -175
  282. package/esm/util.d.ts +1 -53
  283. package/esm/util.js +1 -139
  284. package/package.json +2 -4
@@ -1,43 +1,26 @@
1
1
  import { lazy } from 'react';
2
- import { getConf, } from '@jbrowse/core/configuration';
3
- import { getSession } from '@jbrowse/core/util';
2
+ import { getConf } from '@jbrowse/core/configuration';
3
+ import { getContainingView, getSession } from '@jbrowse/core/util';
4
4
  import { types } from 'mobx-state-tree';
5
5
  import { axisPropsFromTickScale } from 'react-d3-axis-mod';
6
- // locals
7
- import { getScale, YSCALEBAR_LABEL_OFFSET } from '../../util';
8
- import SharedWiggleMixin from '../../shared/modelShared';
9
- // lazies
10
- const Tooltip = lazy(() => import('../components/Tooltip'));
11
- const SetColorDialog = lazy(() => import('../components/SetColorDialog'));
12
- // using a map because it preserves order
6
+ import SharedWiggleMixin from '../shared/SharedWiggleMixin';
7
+ import { YSCALEBAR_LABEL_OFFSET, getScale } from '../util';
8
+ const Tooltip = lazy(() => import('./components/Tooltip'));
9
+ const SetColorDialog = lazy(() => import('./components/SetColorDialog'));
13
10
  const rendererTypes = new Map([
14
11
  ['xyplot', 'XYPlotRenderer'],
15
12
  ['density', 'DensityRenderer'],
16
13
  ['line', 'LinePlotRenderer'],
17
14
  ]);
18
- /**
19
- * #stateModel LinearWiggleDisplay
20
- * extends
21
- * - [SharedWiggleMixin](../sharedwigglemixin)
22
- */
23
15
  function stateModelFactory(pluginManager, configSchema) {
24
16
  return types
25
17
  .compose('LinearWiggleDisplay', SharedWiggleMixin(configSchema), types.model({
26
- /**
27
- * #property
28
- */
29
18
  type: types.literal('LinearWiggleDisplay'),
30
19
  }))
31
20
  .views(self => ({
32
- /**
33
- * #getter
34
- */
35
21
  get TooltipComponent() {
36
22
  return Tooltip;
37
23
  },
38
- /**
39
- * #getter
40
- */
41
24
  get rendererTypeName() {
42
25
  const name = self.rendererTypeNameSimple;
43
26
  const rendererType = rendererTypes.get(name);
@@ -46,84 +29,88 @@ function stateModelFactory(pluginManager, configSchema) {
46
29
  }
47
30
  return rendererType;
48
31
  },
49
- }))
50
- .views(self => ({
51
- /**
52
- * #getter
53
- */
54
- get ticks() {
55
- const { scaleType, domain, height } = self;
56
- const minimalTicks = getConf(self, 'minimalTicks');
57
- const inverted = getConf(self, 'inverted');
58
- const range = [height - YSCALEBAR_LABEL_OFFSET, YSCALEBAR_LABEL_OFFSET];
59
- if (!domain) {
60
- return undefined;
61
- }
62
- const scale = getScale({
63
- scaleType,
64
- domain,
65
- range,
66
- inverted,
67
- });
68
- const ticks = axisPropsFromTickScale(scale, 4);
69
- return height < 100 || minimalTicks
70
- ? { ...ticks, values: domain }
71
- : ticks;
32
+ get quantitativeStatsRelevantToCurrentZoom() {
33
+ var _a;
34
+ const view = getContainingView(self);
35
+ return ((_a = self.stats) === null || _a === void 0 ? void 0 : _a.currStatsBpPerPx) === view.bpPerPx;
72
36
  },
73
37
  }))
74
38
  .views(self => {
75
39
  const { renderProps: superRenderProps } = self;
76
40
  return {
77
- /**
78
- * #method
79
- */
80
- renderProps() {
41
+ adapterProps() {
81
42
  const superProps = superRenderProps();
82
- const { filters, ticks, height, resolution, scaleOpts } = self;
43
+ const { filters, resolution, scaleOpts } = self;
83
44
  return {
84
45
  ...superProps,
85
- notReady: superProps.notReady || !self.stats,
86
46
  rpcDriverName: self.rpcDriverName,
87
47
  displayModel: self,
88
48
  config: self.rendererConfig,
89
49
  displayCrossHatches: self.displayCrossHatchesSetting,
90
50
  scaleOpts,
91
51
  resolution,
92
- height,
93
- ticks,
94
52
  filters,
95
53
  };
96
54
  },
97
- /**
98
- * #getter
99
- */
100
- get needsScalebar() {
101
- const { rendererTypeName: type } = self;
102
- return type === 'XYPlotRenderer' || type === 'LinePlotRenderer';
103
- },
104
- /**
105
- * #getter
106
- */
107
- get fillSetting() {
108
- if (self.filled) {
109
- return 0;
110
- }
111
- else if (self.minSize === 1) {
112
- return 1;
55
+ get ticks() {
56
+ const { scaleType, domain, height } = self;
57
+ const minimalTicks = getConf(self, 'minimalTicks');
58
+ const inverted = getConf(self, 'inverted');
59
+ if (domain) {
60
+ const ticks = axisPropsFromTickScale(getScale({
61
+ scaleType,
62
+ domain,
63
+ range: [
64
+ height - YSCALEBAR_LABEL_OFFSET,
65
+ YSCALEBAR_LABEL_OFFSET,
66
+ ],
67
+ inverted,
68
+ }), 4);
69
+ return height < 100 || minimalTicks
70
+ ? { ...ticks, values: domain }
71
+ : ticks;
113
72
  }
114
73
  else {
115
- return 2;
74
+ return undefined;
116
75
  }
117
76
  },
118
77
  };
119
78
  })
79
+ .views(self => ({
80
+ renderProps() {
81
+ const { ticks, height } = self;
82
+ const superProps = self.adapterProps();
83
+ return {
84
+ ...self.adapterProps(),
85
+ notReady: superProps.notReady || !self.stats,
86
+ height,
87
+ ticks,
88
+ };
89
+ },
90
+ get needsScalebar() {
91
+ return (self.rendererTypeName === 'XYPlotRenderer' ||
92
+ self.rendererTypeName === 'LinePlotRenderer');
93
+ },
94
+ get fillSetting() {
95
+ if (self.filled) {
96
+ return 0;
97
+ }
98
+ else if (self.minSize === 1) {
99
+ return 1;
100
+ }
101
+ else {
102
+ return 2;
103
+ }
104
+ },
105
+ get quantitativeStatsReady() {
106
+ const view = getContainingView(self);
107
+ return (view.initialized && self.statsReadyAndRegionNotTooLarge && !self.error);
108
+ },
109
+ }))
120
110
  .views(self => {
121
111
  const { trackMenuItems: superTrackMenuItems } = self;
122
112
  const hasRenderings = getConf(self, 'defaultRendering');
123
113
  return {
124
- /**
125
- * #method
126
- */
127
114
  trackMenuItems() {
128
115
  return [
129
116
  ...superTrackMenuItems(),
@@ -178,7 +165,10 @@ function stateModelFactory(pluginManager, configSchema) {
178
165
  onClick: () => {
179
166
  getSession(self).queueDialog(handleClose => [
180
167
  SetColorDialog,
181
- { model: self, handleClose },
168
+ {
169
+ model: self,
170
+ handleClose,
171
+ },
182
172
  ]);
183
173
  },
184
174
  },
@@ -190,16 +180,12 @@ function stateModelFactory(pluginManager, configSchema) {
190
180
  const { renderSvg: superRenderSvg } = self;
191
181
  return {
192
182
  afterAttach() {
193
- // eslint-disable-next-line @typescript-eslint/no-floating-promises
194
183
  ;
195
184
  (async () => {
196
- const { quantitativeStatsAutorun } = await import('../../util');
197
- quantitativeStatsAutorun(self);
185
+ const { getQuantitativeStatsAutorun } = await import('../getQuantitativeStatsAutorun');
186
+ getQuantitativeStatsAutorun(self);
198
187
  })();
199
188
  },
200
- /**
201
- * #action
202
- */
203
189
  async renderSvg(opts) {
204
190
  const { renderSvg } = await import('./renderSvg');
205
191
  return renderSvg(self, opts, superRenderSvg);
@@ -1,4 +1,4 @@
1
1
  import React from 'react';
2
- import { ExportSvgDisplayOptions } from '@jbrowse/plugin-linear-genome-view';
3
- import { WiggleDisplayModel } from './model';
2
+ import type { WiggleDisplayModel } from './model';
3
+ import type { ExportSvgDisplayOptions } from '@jbrowse/plugin-linear-genome-view';
4
4
  export declare function renderSvg(self: WiggleDisplayModel, opts: ExportSvgDisplayOptions, superRenderSvg: (opts: ExportSvgDisplayOptions) => Promise<React.ReactNode>): Promise<React.JSX.Element>;
@@ -1,13 +1,13 @@
1
1
  import React from 'react';
2
2
  import { getContainingView } from '@jbrowse/core/util';
3
3
  import { when } from 'mobx';
4
- import YScaleBar from '../../shared/YScaleBar';
4
+ import YScaleBar from '../shared/YScaleBar';
5
5
  export async function renderSvg(self, opts, superRenderSvg) {
6
6
  await when(() => !!self.stats && !!self.regionCannotBeRenderedText);
7
7
  const { needsScalebar, stats } = self;
8
8
  const { offsetPx } = getContainingView(self);
9
9
  return (React.createElement(React.Fragment, null,
10
- React.createElement("g", { id: "snpcov" }, await superRenderSvg(opts)),
10
+ React.createElement("g", null, await superRenderSvg(opts)),
11
11
  needsScalebar && stats ? (React.createElement("g", { transform: `translate(${Math.max(-offsetPx, 0)})` },
12
12
  React.createElement(YScaleBar, { model: self, orientation: "left" }))) : null));
13
13
  }
@@ -1,6 +1,7 @@
1
- import { Feature } from '@jbrowse/core/util';
2
- import WiggleBaseRenderer, { MultiRenderArgsDeserialized as MultiArgs } from '../WiggleBaseRenderer';
3
- export default class MultiXYPlotRenderer extends WiggleBaseRenderer {
1
+ import WiggleBaseRenderer from '../WiggleBaseRenderer';
2
+ import type { MultiRenderArgsDeserialized as MultiArgs } from '../WiggleBaseRenderer';
3
+ import type { Feature } from '@jbrowse/core/util';
4
+ export default class MultiDensityPlotRenderer extends WiggleBaseRenderer {
4
5
  draw(ctx: CanvasRenderingContext2D, props: MultiArgs): Promise<{
5
6
  reducedFeatures: Feature[];
6
7
  }>;
@@ -1,8 +1,7 @@
1
1
  import { groupBy } from '@jbrowse/core/util';
2
2
  import WiggleBaseRenderer from '../WiggleBaseRenderer';
3
3
  import { drawDensity } from '../drawDensity';
4
- export default class MultiXYPlotRenderer extends WiggleBaseRenderer {
5
- // @ts-expect-error
4
+ export default class MultiDensityPlotRenderer extends WiggleBaseRenderer {
6
5
  async draw(ctx, props) {
7
6
  const { sources, features } = props;
8
7
  const groups = groupBy(features.values(), f => f.get('source'));
@@ -1,13 +1,7 @@
1
1
  import { ConfigurationSchema } from '@jbrowse/core/configuration';
2
2
  import baseWiggleRendererConfigSchema from '../configSchema';
3
- /**
4
- * #config MultiDensityRenderer
5
- */
6
- function x() { } // eslint-disable-line @typescript-eslint/no-unused-vars
3
+ function x() { }
7
4
  const configSchema = ConfigurationSchema('MultiDensityRenderer', {}, {
8
- /**
9
- * #baseConfiguration
10
- */
11
5
  baseConfiguration: baseWiggleRendererConfigSchema,
12
6
  explicitlyTyped: true,
13
7
  });
@@ -1,2 +1,2 @@
1
- import PluginManager from '@jbrowse/core/PluginManager';
1
+ import type PluginManager from '@jbrowse/core/PluginManager';
2
2
  export default function MultiDensityRendererF(pluginManager: PluginManager): void;
@@ -1,5 +1,6 @@
1
- import { Feature } from '@jbrowse/core/util';
2
- import WiggleBaseRenderer, { MultiRenderArgsDeserialized as MultiArgs } from '../WiggleBaseRenderer';
1
+ import WiggleBaseRenderer from '../WiggleBaseRenderer';
2
+ import type { MultiRenderArgsDeserialized as MultiArgs } from '../WiggleBaseRenderer';
3
+ import type { Feature } from '@jbrowse/core/util';
3
4
  export default class MultiLineRenderer extends WiggleBaseRenderer {
4
5
  draw(ctx: CanvasRenderingContext2D, props: MultiArgs): Promise<{
5
6
  reducedFeatures: Feature[];
@@ -1,8 +1,7 @@
1
1
  import { groupBy } from '@jbrowse/core/util';
2
- import { drawLine } from '../drawLine';
3
2
  import WiggleBaseRenderer from '../WiggleBaseRenderer';
3
+ import { drawLine } from '../drawLine';
4
4
  export default class MultiLineRenderer extends WiggleBaseRenderer {
5
- // @ts-expect-error
6
5
  async draw(ctx, props) {
7
6
  const { sources, features } = props;
8
7
  const groups = groupBy(features.values(), f => f.get('source'));
@@ -1,15 +1,9 @@
1
1
  declare const configSchema: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
2
- /**
3
- * #slot
4
- */
5
2
  displayCrossHatches: {
6
3
  type: string;
7
4
  description: string;
8
5
  defaultValue: boolean;
9
6
  };
10
- /**
11
- * #slot
12
- */
13
7
  summaryScoreMode: {
14
8
  type: string;
15
9
  model: import("mobx-state-tree").ISimpleType<string>;
@@ -1,22 +1,13 @@
1
1
  import { ConfigurationSchema } from '@jbrowse/core/configuration';
2
2
  import { types } from 'mobx-state-tree';
3
3
  import baseWiggleRendererConfigSchema from '../configSchema';
4
- /**
5
- * #config MultiLineRenderer
6
- */
7
- function x() { } // eslint-disable-line @typescript-eslint/no-unused-vars
4
+ function x() { }
8
5
  const configSchema = ConfigurationSchema('MultiLineRenderer', {
9
- /**
10
- * #slot
11
- */
12
6
  displayCrossHatches: {
13
7
  type: 'boolean',
14
8
  description: 'choose to draw cross hatches (sideways lines)',
15
9
  defaultValue: false,
16
10
  },
17
- /**
18
- * #slot
19
- */
20
11
  summaryScoreMode: {
21
12
  type: 'stringEnum',
22
13
  model: types.enumeration('Score type', ['max', 'min', 'avg', 'whiskers']),
@@ -24,9 +15,6 @@ const configSchema = ConfigurationSchema('MultiLineRenderer', {
24
15
  defaultValue: 'avg',
25
16
  },
26
17
  }, {
27
- /**
28
- * #baseConfiguration
29
- */
30
18
  baseConfiguration: baseWiggleRendererConfigSchema,
31
19
  explicitlyTyped: true,
32
20
  });
@@ -1,2 +1,2 @@
1
- import PluginManager from '@jbrowse/core/PluginManager';
1
+ import type PluginManager from '@jbrowse/core/PluginManager';
2
2
  export default function MultiLineRendererF(pluginManager: PluginManager): void;
@@ -1,5 +1,5 @@
1
1
  import React from 'react';
2
- import { WiggleDisplayModel } from '../models/model';
2
+ import type { WiggleDisplayModel } from '../model';
3
3
  declare const ColorLegend: ({ model, rowHeight, labelWidth, exportSVG, }: {
4
4
  model: WiggleDisplayModel;
5
5
  rowHeight: number;
@@ -10,7 +10,6 @@ const ColorLegend = observer(function ({ model, rowHeight, labelWidth, exportSVG
10
10
  const svgOffset = exportSVG ? 10 : 0;
11
11
  const extraOffset = svgOffset || (needsScalebar && !rowHeightTooSmallForScalebar ? 50 : 0);
12
12
  return sources ? (React.createElement(React.Fragment, null,
13
- /* 0.25 for hanging letters like g */
14
13
  needsFullHeightScalebar ? (React.createElement(RectBg, { y: 0, x: extraOffset, width: legendWidth, height: (sources.length + 0.25) * rowHeight })) : null,
15
14
  sources.map((source, idx) => {
16
15
  const boxHeight = Math.min(20, rowHeight);
@@ -1,5 +1,5 @@
1
1
  import React from 'react';
2
- import { DialogProps } from '@mui/material';
2
+ import type { DialogProps } from '@mui/material';
3
3
  declare const DraggableDialog: (props: DialogProps & {
4
4
  title: string;
5
5
  }) => React.JSX.Element;
@@ -1,10 +1,9 @@
1
1
  import React, { useRef } from 'react';
2
- import { Dialog, DialogTitle, IconButton, Divider, Paper, ScopedCssBaseline, } from '@mui/material';
2
+ import CloseIcon from '@mui/icons-material/Close';
3
+ import { Dialog, DialogTitle, Divider, IconButton, Paper, ScopedCssBaseline, } from '@mui/material';
3
4
  import { observer } from 'mobx-react';
4
- import { makeStyles } from 'tss-react/mui';
5
5
  import Draggable from 'react-draggable';
6
- // icons
7
- import CloseIcon from '@mui/icons-material/Close';
6
+ import { makeStyles } from 'tss-react/mui';
8
7
  const useStyles = makeStyles()(theme => ({
9
8
  closeButton: {
10
9
  position: 'absolute',
@@ -15,9 +14,7 @@ const useStyles = makeStyles()(theme => ({
15
14
  }));
16
15
  function PaperComponent(props) {
17
16
  const ref = useRef(null);
18
- return (React.createElement(Draggable, { nodeRef: ref, cancel: '[class*="MuiDialogContent-root"]',
19
- // @ts-expect-error
20
- onStart: arg => { var _a, _b; return (_b = (_a = arg.target) === null || _a === void 0 ? void 0 : _a.className) === null || _b === void 0 ? void 0 : _b.includes('MuiDialogTitle'); } },
17
+ return (React.createElement(Draggable, { nodeRef: ref, cancel: '[class*="MuiDialogContent-root"]', onStart: arg => { var _a, _b; return (_b = (_a = arg.target) === null || _a === void 0 ? void 0 : _a.className) === null || _b === void 0 ? void 0 : _b.includes('MuiDialogTitle'); } },
21
18
  React.createElement(Paper, { ref: ref, ...props })));
22
19
  }
23
20
  const DraggableDialog = observer(function DraggableDialog(props) {
@@ -28,7 +25,6 @@ const DraggableDialog = observer(function DraggableDialog(props) {
28
25
  React.createElement(DialogTitle, { style: { cursor: 'move' } },
29
26
  title,
30
27
  onClose ? (React.createElement(IconButton, { className: classes.closeButton, onClick: () => {
31
- // @ts-expect-error
32
28
  onClose();
33
29
  } },
34
30
  React.createElement(CloseIcon, null))) : null),
@@ -1,5 +1,5 @@
1
- import { getFillProps } from '@jbrowse/core/util';
2
1
  import React from 'react';
2
+ import { getFillProps } from '@jbrowse/core/util';
3
3
  const RectBg = (props) => {
4
4
  const { color = 'rgb(255,255,255,0.8)' } = props;
5
5
  return React.createElement("rect", { ...props, ...getFillProps(color) });
@@ -1,5 +1,5 @@
1
1
  import React from 'react';
2
- import { WiggleDisplayModel } from '../models/model';
2
+ import type { WiggleDisplayModel } from '../model';
3
3
  declare const ScoreLegend: ({ model }: {
4
4
  model: WiggleDisplayModel;
5
5
  }) => React.JSX.Element;
@@ -1,5 +1,5 @@
1
1
  import React from 'react';
2
- import { measureText, getContainingView } from '@jbrowse/core/util';
2
+ import { getContainingView, measureText } from '@jbrowse/core/util';
3
3
  import { observer } from 'mobx-react';
4
4
  import RectBg from './RectBg';
5
5
  const ScoreLegend = observer(({ model }) => {
@@ -1,5 +1,5 @@
1
1
  import React from 'react';
2
- import { Source } from '../../util';
2
+ import type { Source } from '../../util';
3
3
  export default function SetColorDialog({ model, handleClose, }: {
4
4
  model: {
5
5
  sources?: Source[];
@@ -1,9 +1,7 @@
1
1
  import React, { useState } from 'react';
2
- import { Button, DialogContent, DialogActions } from '@mui/material';
3
- import { makeStyles } from 'tss-react/mui';
4
2
  import { useLocalStorage } from '@jbrowse/core/util';
5
- import clone from 'clone';
6
- // locals
3
+ import { Button, DialogActions, DialogContent } from '@mui/material';
4
+ import { makeStyles } from 'tss-react/mui';
7
5
  import DraggableDialog from './DraggableDialog';
8
6
  import SourcesGrid from './SourcesGrid';
9
7
  const useStyles = makeStyles()({
@@ -14,8 +12,8 @@ const useStyles = makeStyles()({
14
12
  export default function SetColorDialog({ model, handleClose, }) {
15
13
  const { classes } = useStyles();
16
14
  const { sources } = model;
17
- const [currLayout, setCurrLayout] = useState(clone(sources || []));
18
- const [showTips, setShowTips] = useLocalStorage('multiwiggle-showTips', true);
15
+ const [currLayout, setCurrLayout] = useState(structuredClone(sources || []));
16
+ const [showTips, setShowTips] = useLocalStorage('multiwiggle-showTips', false);
19
17
  return (React.createElement(DraggableDialog, { open: true, onClose: handleClose, maxWidth: "xl", title: 'Multi-wiggle color/arrangement editor' },
20
18
  React.createElement(DialogContent, { className: classes.content },
21
19
  React.createElement(Button, { variant: "contained", style: { float: 'right' }, onClick: () => {
@@ -1,5 +1,5 @@
1
1
  import React from 'react';
2
- import { Source } from '../../util';
2
+ import type { Source } from '../../util';
3
3
  declare function SourcesGrid({ rows, onChange, showTips, }: {
4
4
  rows: Source[];
5
5
  onChange: (arg: Source[]) => void;
@@ -1,17 +1,15 @@
1
1
  import React, { useState } from 'react';
2
- import { Button } from '@mui/material';
3
- import { getStr, measureGridWidth } from '@jbrowse/core/util';
4
- import { DataGrid } from '@mui/x-data-grid';
5
- import { makeStyles } from 'tss-react/mui';
6
- import ColorPicker, { ColorPopover } from '@jbrowse/core/ui/ColorPicker';
7
2
  import { SanitizedHTML } from '@jbrowse/core/ui';
8
- // locals
9
- import { moveUp, moveDown } from './util';
10
- // icons
11
- import KeyboardDoubleArrowUpIcon from '@mui/icons-material/KeyboardDoubleArrowUp';
12
- import KeyboardDoubleArrowDownIcon from '@mui/icons-material/KeyboardDoubleArrowDown';
3
+ import ColorPicker, { ColorPopover } from '@jbrowse/core/ui/ColorPicker';
4
+ import { getStr, measureGridWidth } from '@jbrowse/core/util';
13
5
  import KeyboardArrowDownIcon from '@mui/icons-material/KeyboardArrowDown';
14
6
  import KeyboardArrowUpIcon from '@mui/icons-material/KeyboardArrowUp';
7
+ import KeyboardDoubleArrowDownIcon from '@mui/icons-material/KeyboardDoubleArrowDown';
8
+ import KeyboardDoubleArrowUpIcon from '@mui/icons-material/KeyboardDoubleArrowUp';
9
+ import { Button } from '@mui/material';
10
+ import { DataGrid } from '@mui/x-data-grid';
11
+ import { makeStyles } from 'tss-react/mui';
12
+ import { moveDown, moveUp } from './util';
15
13
  const useStyles = makeStyles()({
16
14
  cell: {
17
15
  whiteSpace: 'nowrap',
@@ -72,16 +70,13 @@ function SourcesGrid({ rows, onChange, showTips, }) {
72
70
  {
73
71
  field: 'color',
74
72
  headerName: 'Color',
75
- renderCell: params => {
76
- const { value, id } = params;
77
- return (React.createElement(ColorPicker, { color: value || 'blue', onChange: c => {
78
- const elt = rows.find(f => f.name === id);
79
- if (elt) {
80
- elt.color = c;
81
- }
82
- onChange([...rows]);
83
- } }));
84
- },
73
+ renderCell: ({ value, id }) => (React.createElement(ColorPicker, { color: value || 'blue', onChange: c => {
74
+ const elt = rows.find(f => f.name === id);
75
+ if (elt) {
76
+ elt.color = c;
77
+ }
78
+ onChange([...rows]);
79
+ } })),
85
80
  },
86
81
  {
87
82
  field: 'name',
@@ -94,14 +89,8 @@ function SourcesGrid({ rows, onChange, showTips, }) {
94
89
  React.createElement(SanitizedHTML, { html: getStr(value) }))),
95
90
  width: measureGridWidth(rows.map(r => `${r[val]}`)),
96
91
  })),
97
- ], sortModel: [
98
- /* we control the sort as a controlled component using onSortModelChange */
99
- ], onSortModelChange: args => {
92
+ ], sortModel: [], onSortModelChange: args => {
100
93
  const sort = args[0];
101
- // this idx%2 flip flops the sorting order, we could inspect args
102
- // for sort direction asc or desc but this is just a simplified
103
- // thing since we are controlling sort instead of the default data
104
- // grid sort anyways
105
94
  const idx = (currSort.idx + 1) % 2;
106
95
  const field = sort.field || currSort.field;
107
96
  setCurrSort({ idx, field });
@@ -1,7 +1,7 @@
1
1
  import React from 'react';
2
- import { Feature } from '@jbrowse/core/util';
3
- import { Source } from '../../util';
4
- import { TooltipContentsComponent } from '../../Tooltip';
2
+ import type { TooltipContentsComponent } from '../../Tooltip';
3
+ import type { Source } from '../../util';
4
+ import type { Feature } from '@jbrowse/core/util';
5
5
  type Coord = [number, number];
6
6
  declare const WiggleTooltip: (props: {
7
7
  model: {
@@ -1,8 +1,7 @@
1
1
  import React from 'react';
2
2
  import { observer } from 'mobx-react';
3
- // locals
4
- import { toP } from '../../util';
5
3
  import Tooltip from '../../Tooltip';
4
+ import { toP } from '../../util';
6
5
  const en = (n) => n.toLocaleString('en-US');
7
6
  const TooltipContents = React.forwardRef(function TooltipContents2({ model, feature }, ref) {
8
7
  const start = feature.get('start');
@@ -1,5 +1,5 @@
1
1
  import React from 'react';
2
- import { WiggleDisplayModel } from '../models/model';
2
+ import type { WiggleDisplayModel } from '../model';
3
3
  declare const MultiLinearWiggleDisplayComponent: (props: {
4
4
  model: WiggleDisplayModel;
5
5
  }) => React.JSX.Element;
@@ -1,5 +1,5 @@
1
1
  import React from 'react';
2
- import { WiggleDisplayModel } from '../models/model';
2
+ import type { WiggleDisplayModel } from '../model';
3
3
  export declare const YScaleBars: (props: {
4
4
  model: WiggleDisplayModel;
5
5
  orientation?: string;
@@ -1,10 +1,10 @@
1
1
  import React from 'react';
2
- import { measureText, getContainingView } from '@jbrowse/core/util';
2
+ import { getContainingView, measureText } from '@jbrowse/core/util';
3
3
  import { observer } from 'mobx-react';
4
- import YScaleBar from '../../shared/YScaleBar';
5
4
  import ColorLegend from './ColorLegend';
6
5
  import ScoreLegend from './ScoreLegend';
7
6
  import { getOffset } from './util';
7
+ import YScaleBar from '../../shared/YScaleBar';
8
8
  const Wrapper = observer(function ({ children, model, exportSVG, }) {
9
9
  const { height } = model;
10
10
  return exportSVG ? (children) : (React.createElement("svg", { style: {
@@ -1,4 +1,4 @@
1
- import { WiggleDisplayModel } from '../models/model';
1
+ import type { WiggleDisplayModel } from '../model';
2
2
  export declare function moveUp(arr: {
3
3
  name: string;
4
4
  }[], sel: string[], by?: number): {
@@ -1,5 +1,5 @@
1
- import { getContainingTrack, getContainingView, measureText, } from '@jbrowse/core/util';
2
1
  import { getConf } from '@jbrowse/core/configuration';
2
+ import { getContainingTrack, getContainingView, measureText, } from '@jbrowse/core/util';
3
3
  export function moveUp(arr, sel, by = 1) {
4
4
  const idxs = sel
5
5
  .map(l => arr.findIndex(v => v.name === l))