@jbrowse/plugin-wiggle 2.11.0 → 2.11.2

package/dist/BigWigAdapter/index.d.ts

@@ -1,3 +1,2 @@
 import PluginManager from '@jbrowse/core/PluginManager';
-declare const _default: (pluginManager: PluginManager) => void;
-export default _default;
+export default function BigWigAdapterF(pluginManager: PluginManager): void;

package/dist/BigWigAdapter/index.js

@@ -28,7 +28,7 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
 Object.defineProperty(exports, "__esModule", { value: true });
 const AdapterType_1 = __importDefault(require("@jbrowse/core/pluggableElementTypes/AdapterType"));
 const configSchema_1 = __importDefault(require("./configSchema"));
-exports.default = (pluginManager) => {
+function BigWigAdapterF(pluginManager) {
     pluginManager.addAdapterType(() => new AdapterType_1.default({
         name: 'BigWigAdapter',
         displayName: 'BigWig adapter',
@@ -40,4 +40,5 @@ exports.default = (pluginManager) => {
         ],
         getAdapterClass: () => Promise.resolve().then(() => __importStar(require('./BigWigAdapter'))).then(r => r.default),
     }));
-};
+}
+exports.default = BigWigAdapterF;

package/dist/CreateMultiWiggleExtension/index.d.ts

@@ -1,2 +1,2 @@
 import PluginManager from '@jbrowse/core/PluginManager';
-export default function (pm: PluginManager): void;
+export default function CreateMultiWiggleExtensionF(pm: PluginManager): void;

package/dist/CreateMultiWiggleExtension/index.js

@@ -27,7 +27,7 @@ const react_1 = require("react");
 const configuration_1 = require("@jbrowse/core/configuration");
 const util_1 = require("@jbrowse/core/util");
 const ConfirmDialog = (0, react_1.lazy)(() => Promise.resolve().then(() => __importStar(require('./ConfirmDialog'))));
-function default_1(pm) {
+function CreateMultiWiggleExtensionF(pm) {
     pm.addToExtensionPoint('TrackSelector-multiTrackMenuItems', (items, props) => {
         const { session } = props;
         return [
@@ -82,4 +82,4 @@ function default_1(pm) {
         ];
     });
 }
-exports.default = default_1;
+exports.default = CreateMultiWiggleExtensionF;

package/dist/DensityRenderer/index.d.ts

@@ -1,3 +1,2 @@
 import PluginManager from '@jbrowse/core/PluginManager';
-declare const _default: (pluginManager: PluginManager) => void;
-export default _default;
+export default function DensityRendererF(pluginManager: PluginManager): void;

package/dist/DensityRenderer/index.js

@@ -6,11 +6,12 @@ Object.defineProperty(exports, "__esModule", { value: true });
 const configSchema_1 = __importDefault(require("./configSchema"));
 const DensityRenderer_1 = __importDefault(require("./DensityRenderer"));
 const WiggleRendering_1 = __importDefault(require("../WiggleRendering"));
-exports.default = (pluginManager) => {
+function DensityRendererF(pluginManager) {
     pluginManager.addRendererType(() => new DensityRenderer_1.default({
         name: 'DensityRenderer',
         ReactComponent: WiggleRendering_1.default,
         configSchema: configSchema_1.default,
         pluginManager,
     }));
-};
+}
+exports.default = DensityRendererF;

package/dist/LinePlotRenderer/LinePlotRenderer.d.ts

@@ -1,6 +1,7 @@
+import { Feature } from '@jbrowse/core/util';
 import WiggleBaseRenderer, { RenderArgsDeserializedWithFeatures } from '../WiggleBaseRenderer';
 export default class LinePlotRenderer extends WiggleBaseRenderer {
     draw(ctx: CanvasRenderingContext2D, props: RenderArgsDeserializedWithFeatures): Promise<{
-        reducedFeatures: import("@jbrowse/core/util").Feature[];
+        reducedFeatures: Feature[];
     }>;
 }

package/dist/LinePlotRenderer/LinePlotRenderer.js

@@ -3,15 +3,20 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
+const configuration_1 = require("@jbrowse/core/configuration");
 const WiggleBaseRenderer_1 = __importDefault(require("../WiggleBaseRenderer"));
 const util_1 = require("../util");
 const drawLine_1 = require("../drawLine");
 class LinePlotRenderer extends WiggleBaseRenderer_1.default {
     async draw(ctx, props) {
+        const { config } = props;
+        const c = (0, configuration_1.readConfObject)(config, 'color');
         return (0, drawLine_1.drawLine)(ctx, {
             ...props,
             offset: util_1.YSCALEBAR_LABEL_OFFSET,
-            colorCallback: () => 'grey',
+            colorCallback: c === '#f0f'
+                ? () => 'grey'
+                : (feature) => (0, configuration_1.readConfObject)(config, 'color', { feature }),
         });
     }
 }

package/dist/LinePlotRenderer/index.d.ts

@@ -1,3 +1,2 @@
 import PluginManager from '@jbrowse/core/PluginManager';
-declare const _default: (pluginManager: PluginManager) => void;
-export default _default;
+export default function LinePlotRendererF(pluginManager: PluginManager): void;

package/dist/LinePlotRenderer/index.js

@@ -6,11 +6,12 @@ Object.defineProperty(exports, "__esModule", { value: true });
 const configSchema_1 = __importDefault(require("./configSchema"));
 const WiggleRendering_1 = __importDefault(require("../WiggleRendering"));
 const LinePlotRenderer_1 = __importDefault(require("./LinePlotRenderer"));
-exports.default = (pluginManager) => {
+function LinePlotRendererF(pluginManager) {
     pluginManager.addRendererType(() => new LinePlotRenderer_1.default({
         name: 'LinePlotRenderer',
         ReactComponent: WiggleRendering_1.default,
         configSchema: configSchema_1.default,
         pluginManager,
     }));
-};
+}
+exports.default = LinePlotRendererF;

package/dist/LinearWiggleDisplay/components/SetColorDialog.js

@@ -33,8 +33,8 @@ const SetColorDialog = (0, mobx_react_1.observer)(function SetColorDialog({ mode
     return (react_1.default.createElement(ui_1.Dialog, { open: true, onClose: handleClose, title: "Set color" },
         react_1.default.createElement(material_1.DialogContent, null,
             react_1.default.createElement(material_1.Typography, null, "Select either an overall color, or the positive/negative colors. Note that density renderers only work properly with positive/negative colors"),
-            react_1.default.createElement(material_1.FormControlLabel, { checked: !posneg, onClick: () => setPosNeg(false), control: react_1.default.createElement(material_1.Radio, null), label: 'Overall color' }),
-            react_1.default.createElement(material_1.FormControlLabel, { checked: posneg, onClick: () => setPosNeg(true), control: react_1.default.createElement(material_1.Radio, null), label: 'Positive/negative color' }),
+            react_1.default.createElement(material_1.FormControlLabel, { checked: !posneg, onClick: () => setPosNeg(false), control: react_1.default.createElement(material_1.Radio, null), label: "Overall color" }),
+            react_1.default.createElement(material_1.FormControlLabel, { checked: posneg, onClick: () => setPosNeg(true), control: react_1.default.createElement(material_1.Radio, null), label: "Positive/negative color" }),
             posneg ? (react_1.default.createElement(react_1.default.Fragment, null,
                 react_1.default.createElement(material_1.Typography, null, "Positive color"),
                 react_1.default.createElement(ColorPicker_1.ColorPicker, { color: model.posColor || 'black', onChange: event => {

package/dist/LinearWiggleDisplay/index.d.ts

@@ -1,6 +1,5 @@
 import PluginManager from '@jbrowse/core/PluginManager';
-declare const _default: (pluginManager: PluginManager) => void;
-export default _default;
+export default function LinearWiggleDisplayF(pluginManager: PluginManager): void;
 export { default as Tooltip } from './components/Tooltip';
 export { default as ReactComponent } from './components/WiggleDisplayComponent';
 export { default as modelFactory } from './models/model';

package/dist/LinearWiggleDisplay/index.js

@@ -31,7 +31,7 @@ const DisplayType_1 = __importDefault(require("@jbrowse/core/pluggableElementTyp
 const configSchema_1 = __importDefault(require("./models/configSchema"));
 const model_1 = __importDefault(require("./models/model"));
 const react_1 = require("react");
-exports.default = (pluginManager) => {
+function LinearWiggleDisplayF(pluginManager) {
     pluginManager.addDisplayType(() => {
         const configSchema = (0, configSchema_1.default)(pluginManager);
         const stateModel = (0, model_1.default)(pluginManager, configSchema);
@@ -45,7 +45,8 @@ exports.default = (pluginManager) => {
             ReactComponent: (0, react_1.lazy)(() => Promise.resolve().then(() => __importStar(require('./components/WiggleDisplayComponent')))),
         });
     });
-};
+}
+exports.default = LinearWiggleDisplayF;
 var Tooltip_1 = require("./components/Tooltip");
 Object.defineProperty(exports, "Tooltip", { enumerable: true, get: function () { return __importDefault(Tooltip_1).default; } });
 var WiggleDisplayComponent_1 = require("./components/WiggleDisplayComponent");

package/dist/LinearWiggleDisplay/models/configSchema.d.ts

@@ -69,7 +69,9 @@ export default function WiggleConfigFactory(pluginManager: PluginManager): impor
         type: string;
         defaultValue: number;
         description: string;
-    };
+    }; /**
+     * #slot
+     */
     height: {
         type: string;
         defaultValue: number;
@@ -81,4 +83,9 @@ export default function WiggleConfigFactory(pluginManager: PluginManager): impor
         defaultValue: string;
         contextVariable: string[];
     };
+    jexlFilters: {
+        type: string;
+        description: string;
+        defaultValue: never[];
+    };
 }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>, undefined>>, undefined>>;

package/dist/LinearWiggleDisplay/models/model.d.ts

@@ -95,6 +95,11 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
             defaultValue: string;
             contextVariable: string[];
         };
+        jexlFilters: {
+            type: string;
+            description: string;
+            defaultValue: never[];
+        };
     }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
 } & {
     selectedRendering: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
@@ -235,6 +240,7 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
     addBlock(key: string, block: import("@jbrowse/core/util/blockTypes").BaseBlock): void;
     deleteBlock(key: string): void;
     selectFeature(feature: import("@jbrowse/core/util").Feature): void;
+    navToFeature(feature: import("@jbrowse/core/util").Feature): void;
     clearFeatureSelection(): void;
     setFeatureIdUnderMouse(feature?: string | undefined): void;
     setContextMenuFeature(feature?: import("@jbrowse/core/util").Feature | undefined): void;

package/dist/MultiDensityRenderer/index.d.ts

@@ -1,3 +1,2 @@
 import PluginManager from '@jbrowse/core/PluginManager';
-declare const _default: (pluginManager: PluginManager) => void;
-export default _default;
+export default function MultiDensityRendererF(pluginManager: PluginManager): void;

package/dist/MultiDensityRenderer/index.js

@@ -6,11 +6,12 @@ Object.defineProperty(exports, "__esModule", { value: true });
 const configSchema_1 = __importDefault(require("./configSchema"));
 const MultiWiggleRendering_1 = __importDefault(require("../MultiWiggleRendering"));
 const MultiDensityRenderer_1 = __importDefault(require("./MultiDensityRenderer"));
-exports.default = (pluginManager) => {
+function MultiDensityRendererF(pluginManager) {
     pluginManager.addRendererType(() => new MultiDensityRenderer_1.default({
         name: 'MultiDensityRenderer',
         ReactComponent: MultiWiggleRendering_1.default,
         configSchema: configSchema_1.default,
         pluginManager,
     }));
-};
+}
+exports.default = MultiDensityRendererF;

package/dist/MultiLineRenderer/index.d.ts

@@ -1,3 +1,2 @@
 import PluginManager from '@jbrowse/core/PluginManager';
-declare const _default: (pluginManager: PluginManager) => void;
-export default _default;
+export default function MultiLineRendererF(pluginManager: PluginManager): void;

package/dist/MultiLineRenderer/index.js

@@ -6,11 +6,12 @@ Object.defineProperty(exports, "__esModule", { value: true });
 const MultiWiggleRendering_1 = __importDefault(require("../MultiWiggleRendering"));
 const MultiLineRenderer_1 = __importDefault(require("./MultiLineRenderer"));
 const configSchema_1 = __importDefault(require("./configSchema"));
-exports.default = (pluginManager) => {
+function MultiLineRendererF(pluginManager) {
     pluginManager.addRendererType(() => new MultiLineRenderer_1.default({
         name: 'MultiLineRenderer',
         ReactComponent: MultiWiggleRendering_1.default,
         configSchema: configSchema_1.default,
         pluginManager,
     }));
-};
+}
+exports.default = MultiLineRendererF;

package/dist/MultiLinearWiggleDisplay/components/RectBg.js

@@ -3,9 +3,10 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
+const util_1 = require("@jbrowse/core/util");
 const react_1 = __importDefault(require("react"));
 const RectBg = (props) => {
     const { color = 'rgb(255,255,255,0.8)' } = props;
-    return react_1.default.createElement("rect", { ...props, fill: color });
+    return react_1.default.createElement("rect", { ...props, ...(0, util_1.getFillProps)(color) });
 };
 exports.default = RectBg;

package/dist/MultiLinearWiggleDisplay/index.d.ts

@@ -1,3 +1,2 @@
 import PluginManager from '@jbrowse/core/PluginManager';
-declare const _default: (pluginManager: PluginManager) => void;
-export default _default;
+export default function MultiLinearWiggleDisplayF(pluginManager: PluginManager): void;

package/dist/MultiLinearWiggleDisplay/index.js

@@ -30,7 +30,7 @@ const DisplayType_1 = __importDefault(require("@jbrowse/core/pluggableElementTyp
 const configSchema_1 = __importDefault(require("./models/configSchema"));
 const model_1 = __importDefault(require("./models/model"));
 const react_1 = require("react");
-exports.default = (pluginManager) => {
+function MultiLinearWiggleDisplayF(pluginManager) {
     pluginManager.addDisplayType(() => {
         const configSchema = (0, configSchema_1.default)(pluginManager);
         return new DisplayType_1.default({
@@ -43,4 +43,5 @@ exports.default = (pluginManager) => {
             ReactComponent: (0, react_1.lazy)(() => Promise.resolve().then(() => __importStar(require('./components/WiggleDisplayComponent')))),
         });
     });
-};
+}
+exports.default = MultiLinearWiggleDisplayF;

package/dist/MultiLinearWiggleDisplay/models/configSchema.d.ts

@@ -78,11 +78,18 @@ export default function WiggleConfigFactory(pluginManager: PluginManager): impor
         type: string;
         defaultValue: number;
         description: string;
-    };
+    }; /**
+     * #slot
+     */
     mouseover: {
         type: string;
         description: string;
         defaultValue: string;
         contextVariable: string[];
     };
+    jexlFilters: {
+        type: string;
+        description: string;
+        defaultValue: never[];
+    };
 }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>, undefined>>, undefined>>;

package/dist/MultiLinearWiggleDisplay/models/model.d.ts

@@ -101,7 +101,14 @@ export declare function stateModelFactory(pluginManager: PluginManager, configSc
             defaultValue: string;
             contextVariable: string[];
         };
-    }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
+        jexlFilters: {
+            type: string;
+            description: string;
+            defaultValue: never[];
+        };
+    }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>; /**
+     * #action
+     */
 } & {
     selectedRendering: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
     resolution: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<number>, [undefined]>;
@@ -249,6 +256,7 @@ export declare function stateModelFactory(pluginManager: PluginManager, configSc
     addBlock(key: string, block: import("@jbrowse/core/util/blockTypes").BaseBlock): void;
     deleteBlock(key: string): void;
     selectFeature(feature: Feature): void;
+    navToFeature(feature: Feature): void;
     clearFeatureSelection(): void;
     setFeatureIdUnderMouse(feature?: string | undefined): void;
     setContextMenuFeature(feature?: Feature | undefined): void;

package/dist/MultiQuantitativeTrack/index.d.ts

@@ -1,3 +1,2 @@
 import PluginManager from '@jbrowse/core/PluginManager';
-declare const _default: (pluginManager: PluginManager) => void;
-export default _default;
+export default function MultiQuantitativeTrackF(pluginManager: PluginManager): void;

package/dist/MultiQuantitativeTrack/index.js

@@ -6,7 +6,7 @@ Object.defineProperty(exports, "__esModule", { value: true });
 const models_1 = require("@jbrowse/core/pluggableElementTypes/models");
 const TrackType_1 = __importDefault(require("@jbrowse/core/pluggableElementTypes/TrackType"));
 const configSchema_1 = __importDefault(require("./configSchema"));
-exports.default = (pluginManager) => {
+function MultiQuantitativeTrackF(pluginManager) {
     pluginManager.addTrackType(() => {
         const configSchema = (0, configSchema_1.default)(pluginManager);
         return new TrackType_1.default({
@@ -16,4 +16,5 @@ exports.default = (pluginManager) => {
             stateModel: (0, models_1.createBaseTrackModel)(pluginManager, 'MultiQuantitativeTrack', configSchema),
         });
     });
-};
+}
+exports.default = MultiQuantitativeTrackF;

package/dist/MultiRowLineRenderer/index.d.ts

@@ -1,3 +1,2 @@
 import PluginManager from '@jbrowse/core/PluginManager';
-declare const _default: (pluginManager: PluginManager) => void;
-export default _default;
+export default function MultiRowLineRendererF(pluginManager: PluginManager): void;

package/dist/MultiRowLineRenderer/index.js

@@ -6,11 +6,12 @@ Object.defineProperty(exports, "__esModule", { value: true });
 const MultiWiggleRendering_1 = __importDefault(require("../MultiWiggleRendering"));
 const MultiRowLineRenderer_1 = __importDefault(require("./MultiRowLineRenderer"));
 const configSchema_1 = __importDefault(require("./configSchema"));
-exports.default = (pluginManager) => {
+function MultiRowLineRendererF(pluginManager) {
     pluginManager.addRendererType(() => new MultiRowLineRenderer_1.default({
         name: 'MultiRowLineRenderer',
         ReactComponent: MultiWiggleRendering_1.default,
         configSchema: configSchema_1.default,
         pluginManager,
     }));
-};
+}
+exports.default = MultiRowLineRendererF;

package/dist/MultiRowXYPlotRenderer/index.d.ts

@@ -1,3 +1,2 @@
 import PluginManager from '@jbrowse/core/PluginManager';
-declare const _default: (pluginManager: PluginManager) => void;
-export default _default;
+export default function MultiRowXYPlotRendererF(pluginManager: PluginManager): void;

package/dist/MultiRowXYPlotRenderer/index.js

@@ -6,11 +6,12 @@ Object.defineProperty(exports, "__esModule", { value: true });
 const MultiWiggleRendering_1 = __importDefault(require("../MultiWiggleRendering"));
 const MultiRowXYPlotRenderer_1 = __importDefault(require("./MultiRowXYPlotRenderer"));
 const configSchema_1 = __importDefault(require("./configSchema"));
-exports.default = (pluginManager) => {
+function MultiRowXYPlotRendererF(pluginManager) {
     pluginManager.addRendererType(() => new MultiRowXYPlotRenderer_1.default({
         name: 'MultiRowXYPlotRenderer',
         ReactComponent: MultiWiggleRendering_1.default,
         configSchema: configSchema_1.default,
         pluginManager,
     }));
-};
+}
+exports.default = MultiRowXYPlotRendererF;

package/dist/MultiWiggleAdapter/index.d.ts

@@ -1,3 +1,2 @@
 import PluginManager from '@jbrowse/core/PluginManager';
-declare const _default: (pluginManager: PluginManager) => void;
-export default _default;
+export default function MultiWiggleAdapterF(pluginManager: PluginManager): void;

package/dist/MultiWiggleAdapter/index.js

@@ -28,7 +28,7 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
 Object.defineProperty(exports, "__esModule", { value: true });
 const configSchema_1 = __importDefault(require("./configSchema"));
 const AdapterType_1 = __importDefault(require("@jbrowse/core/pluggableElementTypes/AdapterType"));
-exports.default = (pluginManager) => {
+function MultiWiggleAdapterF(pluginManager) {
     pluginManager.addAdapterType(() => new AdapterType_1.default({
         name: 'MultiWiggleAdapter',
         displayName: 'Multi-wiggle adapter',
@@ -43,4 +43,5 @@ exports.default = (pluginManager) => {
         },
         getAdapterClass: () => Promise.resolve().then(() => __importStar(require('./MultiWiggleAdapter'))).then(r => r.default),
     }));
-};
+}
+exports.default = MultiWiggleAdapterF;

package/dist/MultiWiggleAddTrackWorkflow/index.d.ts

@@ -0,0 +1,2 @@
+import PluginManager from '@jbrowse/core/PluginManager';
+export default function MultiWiggleAddTrackWorkflowF(pm: PluginManager): void;

package/dist/{MultiWiggleAddTrackWidget → MultiWiggleAddTrackWorkflow}/index.js

@@ -27,10 +27,11 @@ const pluggableElementTypes_1 = require("@jbrowse/core/pluggableElementTypes");
 const mobx_state_tree_1 = require("mobx-state-tree");
 // locals
 const react_1 = require("react");
-exports.default = (pm) => {
+function MultiWiggleAddTrackWorkflowF(pm) {
     pm.addAddTrackWorkflowType(() => new pluggableElementTypes_1.AddTrackWorkflowType({
         name: 'Multi-wiggle track',
         ReactComponent: (0, react_1.lazy)(() => Promise.resolve().then(() => __importStar(require('./AddTrackWorkflow')))),
         stateModel: mobx_state_tree_1.types.model({}),
     }));
-};
+}
+exports.default = MultiWiggleAddTrackWorkflowF;

package/dist/MultiXYPlotRenderer/index.d.ts

@@ -1,3 +1,2 @@
 import PluginManager from '@jbrowse/core/PluginManager';
-declare const _default: (pluginManager: PluginManager) => void;
-export default _default;
+export default function MultiXYPlotRendererF(pluginManager: PluginManager): void;

package/dist/MultiXYPlotRenderer/index.js

@@ -6,11 +6,12 @@ Object.defineProperty(exports, "__esModule", { value: true });
 const MultiWiggleRendering_1 = __importDefault(require("../MultiWiggleRendering"));
 const MultiXYPlotRenderer_1 = __importDefault(require("./MultiXYPlotRenderer"));
 const configSchema_1 = __importDefault(require("./configSchema"));
-exports.default = (pluginManager) => {
+function MultiXYPlotRendererF(pluginManager) {
     pluginManager.addRendererType(() => new MultiXYPlotRenderer_1.default({
         name: 'MultiXYPlotRenderer',
         ReactComponent: MultiWiggleRendering_1.default,
         configSchema: configSchema_1.default,
         pluginManager,
     }));
-};
+}
+exports.default = MultiXYPlotRendererF;

package/dist/QuantitativeTrack/index.d.ts

@@ -1,3 +1,2 @@
 import PluginManager from '@jbrowse/core/PluginManager';
-declare const _default: (pluginManager: PluginManager) => void;
-export default _default;
+export default function QuantitativeTrackF(pluginManager: PluginManager): void;

package/dist/QuantitativeTrack/index.js

@@ -6,7 +6,7 @@ Object.defineProperty(exports, "__esModule", { value: true });
 const models_1 = require("@jbrowse/core/pluggableElementTypes/models");
 const TrackType_1 = __importDefault(require("@jbrowse/core/pluggableElementTypes/TrackType"));
 const configSchema_1 = __importDefault(require("./configSchema"));
-exports.default = (pluginManager) => {
+function QuantitativeTrackF(pluginManager) {
     pluginManager.addTrackType(() => {
         const configSchema = (0, configSchema_1.default)(pluginManager);
         return new TrackType_1.default({
@@ -16,4 +16,5 @@ exports.default = (pluginManager) => {
             stateModel: (0, models_1.createBaseTrackModel)(pluginManager, 'QuantitativeTrack', configSchema),
         });
     });
-};
+}
+exports.default = QuantitativeTrackF;

package/dist/Tooltip.js

@@ -44,6 +44,7 @@ const Tooltip = (0, mobx_react_1.observer)(function Tooltip({ model, height, cli
     const { classes } = useStyles();
     const { refs, floatingStyles, context } = (0, react_2.useFloating)({
         placement: 'right',
+        strategy: 'fixed',
     });
     const x = clientMouseCoord[0] + 5;
     const y = useClientY ? clientMouseCoord[1] : (clientRect === null || clientRect === void 0 ? void 0 : clientRect.top) || 0;

package/dist/WiggleRPC/WiggleGetMultiRegionQuantitativeStats.d.ts

@@ -16,5 +16,5 @@ export declare class WiggleGetMultiRegionQuantitativeStats extends RpcMethodType
         headers?: Record<string, string>;
         regions: Region[];
         bpPerPx: number;
-    }, rpcDriverClassName: string): Promise<import("@jbrowse/core/util/stats").QuantitativeStats>;
+    }, rpcDriverClassName: string): Promise<any>;
 }

package/dist/WiggleRPC/WiggleGetMultiRegionQuantitativeStats.js

@@ -8,7 +8,6 @@ const RpcMethodType_1 = __importDefault(require("@jbrowse/core/pluggableElementT
 const serializableFilterChain_1 = __importDefault(require("@jbrowse/core/pluggableElementTypes/renderers/util/serializableFilterChain"));
 const dataAdapterCache_1 = require("@jbrowse/core/data_adapters/dataAdapterCache");
 const util_1 = require("@jbrowse/core/util");
-const BaseAdapter_1 = require("@jbrowse/core/data_adapters/BaseAdapter");
 class WiggleGetMultiRegionQuantitativeStats extends RpcMethodType_1.default {
     constructor() {
         super(...arguments);
@@ -44,10 +43,8 @@ class WiggleGetMultiRegionQuantitativeStats extends RpcMethodType_1.default {
         const deserializedArgs = await this.deserializeArguments(args, rpcDriverClassName);
         const { regions, adapterConfig, sessionId } = deserializedArgs;
         const { dataAdapter } = await (0, dataAdapterCache_1.getAdapter)(pm, sessionId, adapterConfig);
-        if (dataAdapter instanceof BaseAdapter_1.BaseFeatureDataAdapter) {
-            return dataAdapter.getMultiRegionQuantitativeStats(regions, deserializedArgs);
-        }
-        throw new Error('Data adapter not found');
+        // @ts-expect-error
+        return dataAdapter.getMultiRegionQuantitativeStats(regions, deserializedArgs);
     }
 }
 exports.WiggleGetMultiRegionQuantitativeStats = WiggleGetMultiRegionQuantitativeStats;

package/dist/XYPlotRenderer/index.d.ts

@@ -1,6 +1,5 @@
 import PluginManager from '@jbrowse/core/PluginManager';
-declare const _default: (pluginManager: PluginManager) => void;
-export default _default;
+export default function XYPlotRendererF(pluginManager: PluginManager): void;
 export { default as XYPlotRenderer } from './XYPlotRenderer';
 export { default as ReactComponent } from '../WiggleRendering';
 export { default as configSchema } from './configSchema';

package/dist/XYPlotRenderer/index.js

@@ -7,14 +7,15 @@ exports.configSchema = exports.ReactComponent = exports.XYPlotRenderer = void 0;
 const WiggleRendering_1 = __importDefault(require("../WiggleRendering"));
 const XYPlotRenderer_1 = __importDefault(require("./XYPlotRenderer"));
 const configSchema_1 = __importDefault(require("./configSchema"));
-exports.default = (pluginManager) => {
+function XYPlotRendererF(pluginManager) {
     pluginManager.addRendererType(() => new XYPlotRenderer_1.default({
         name: 'XYPlotRenderer',
         ReactComponent: WiggleRendering_1.default,
         configSchema: configSchema_1.default,
         pluginManager,
     }));
-};
+}
+exports.default = XYPlotRendererF;
 var XYPlotRenderer_2 = require("./XYPlotRenderer");
 Object.defineProperty(exports, "XYPlotRenderer", { enumerable: true, get: function () { return __importDefault(XYPlotRenderer_2).default; } });
 var WiggleRendering_2 = require("../WiggleRendering");

package/dist/index.d.ts

@@ -148,6 +148,11 @@ export default class WigglePlugin extends Plugin {
                         defaultValue: string;
                         contextVariable: string[];
                     };
+                    jexlFilters: {
+                        type: string;
+                        description: string;
+                        defaultValue: never[];
+                    };
                 }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">> & import("@jbrowse/core/configuration").AnyConfigurationSchemaType>;
                 selectedRendering: string;
                 resolution: number;
@@ -280,6 +285,7 @@ export default class WigglePlugin extends Plugin {
                 addBlock(key: string, block: import("@jbrowse/core/util/blockTypes").BaseBlock): void;
                 deleteBlock(key: string): void;
                 selectFeature(feature: import("@jbrowse/core/util").Feature): void;
+                navToFeature(feature: import("@jbrowse/core/util").Feature): void;
                 clearFeatureSelection(): void;
                 setFeatureIdUnderMouse(feature?: string | undefined): void;
                 setContextMenuFeature(feature?: import("@jbrowse/core/util").Feature | undefined): void;
@@ -525,6 +531,11 @@ export default class WigglePlugin extends Plugin {
                         defaultValue: string;
                         contextVariable: string[];
                     };
+                    jexlFilters: {
+                        type: string;
+                        description: string;
+                        defaultValue: never[];
+                    };
                 }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
             } & {
                 selectedRendering: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
@@ -658,6 +669,7 @@ export default class WigglePlugin extends Plugin {
                 addBlock(key: string, block: import("@jbrowse/core/util/blockTypes").BaseBlock): void;
                 deleteBlock(key: string): void;
                 selectFeature(feature: import("@jbrowse/core/util").Feature): void;
+                navToFeature(feature: import("@jbrowse/core/util").Feature): void;
                 clearFeatureSelection(): void;
                 setFeatureIdUnderMouse(feature?: string | undefined): void;
                 setContextMenuFeature(feature?: import("@jbrowse/core/util").Feature | undefined): void;

package/dist/index.js

@@ -49,7 +49,7 @@ const MultiDensityRenderer_1 = __importDefault(require("./MultiDensityRenderer")
 const MultiLineRenderer_1 = __importDefault(require("./MultiLineRenderer"));
 const MultiRowLineRenderer_1 = __importDefault(require("./MultiRowLineRenderer"));
 const CreateMultiWiggleExtension_1 = __importDefault(require("./CreateMultiWiggleExtension"));
-const MultiWiggleAddTrackWidget_1 = __importDefault(require("./MultiWiggleAddTrackWidget"));
+const MultiWiggleAddTrackWorkflow_1 = __importDefault(require("./MultiWiggleAddTrackWorkflow"));
 const utils = __importStar(require("./util"));
 const rpcMethods_1 = require("./WiggleRPC/rpcMethods");
 const LinearWiggleDisplay_2 = require("./LinearWiggleDisplay");
@@ -83,7 +83,7 @@ class WigglePlugin extends Plugin_1.default {
         (0, MultiDensityRenderer_1.default)(pm);
         (0, MultiLineRenderer_1.default)(pm);
         (0, MultiRowLineRenderer_1.default)(pm);
-        (0, MultiWiggleAddTrackWidget_1.default)(pm);
+        (0, MultiWiggleAddTrackWorkflow_1.default)(pm);
         (0, CreateMultiWiggleExtension_1.default)(pm);
         pm.addToExtensionPoint('Core-guessAdapterForLocation', (cb) => {
             return (file, index, hint) => {