@jbrowse/plugin-linear-genome-view 2.5.0 → 2.6.2

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (459) hide show
  1. package/dist/BaseLinearDisplay/components/BaseLinearDisplay.d.ts +1 -1
  2. package/dist/BaseLinearDisplay/components/BaseLinearDisplay.js +0 -1
  3. package/dist/BaseLinearDisplay/components/Block.d.ts +3 -3
  4. package/dist/BaseLinearDisplay/components/Block.js +0 -1
  5. package/dist/BaseLinearDisplay/components/BlockMsg.d.ts +1 -1
  6. package/dist/BaseLinearDisplay/components/BlockMsg.js +0 -1
  7. package/dist/BaseLinearDisplay/components/LinearBlocks.d.ts +3 -2
  8. package/dist/BaseLinearDisplay/components/LinearBlocks.js +0 -1
  9. package/dist/BaseLinearDisplay/components/ServerSideRenderedBlockContent.js +0 -1
  10. package/dist/BaseLinearDisplay/components/TooLargeMessage.d.ts +2 -1
  11. package/dist/BaseLinearDisplay/components/TooLargeMessage.js +0 -1
  12. package/dist/BaseLinearDisplay/components/Tooltip.d.ts +2 -1
  13. package/dist/BaseLinearDisplay/components/Tooltip.js +0 -1
  14. package/dist/BaseLinearDisplay/index.d.ts +5 -2
  15. package/dist/BaseLinearDisplay/index.js +7 -2
  16. package/dist/BaseLinearDisplay/models/BaseLinearDisplayModel.d.ts +62 -142
  17. package/dist/BaseLinearDisplay/models/BaseLinearDisplayModel.js +34 -356
  18. package/dist/BaseLinearDisplay/models/FeatureDensityMixin.d.ts +99 -0
  19. package/dist/BaseLinearDisplay/models/FeatureDensityMixin.js +189 -0
  20. package/dist/BaseLinearDisplay/models/TrackHeightMixin.d.ts +30 -0
  21. package/dist/BaseLinearDisplay/models/TrackHeightMixin.js +55 -0
  22. package/dist/BaseLinearDisplay/models/autorunFeatureDensityStats.d.ts +2 -0
  23. package/dist/BaseLinearDisplay/models/autorunFeatureDensityStats.js +41 -0
  24. package/dist/BaseLinearDisplay/models/configSchema.js +1 -1
  25. package/dist/BaseLinearDisplay/models/renderSvg.d.ts +8 -0
  26. package/dist/BaseLinearDisplay/models/renderSvg.js +82 -0
  27. package/dist/BaseLinearDisplay/models/serverSideRenderedBlock.js +20 -17
  28. package/dist/BaseLinearDisplay/models/util.js +0 -1
  29. package/dist/BasicTrack/configSchema.js +1 -1
  30. package/dist/BasicTrack/index.js +0 -1
  31. package/dist/FeatureTrack/configSchema.d.ts +1 -3
  32. package/dist/FeatureTrack/configSchema.js +1 -1
  33. package/dist/FeatureTrack/index.js +0 -1
  34. package/dist/LaunchLinearGenomeView/index.js +0 -1
  35. package/dist/LinearBareDisplay/configSchema.d.ts +1 -0
  36. package/dist/LinearBareDisplay/configSchema.js +1 -1
  37. package/dist/LinearBareDisplay/index.js +0 -1
  38. package/dist/LinearBareDisplay/model.d.ts +52 -39
  39. package/dist/LinearBareDisplay/model.js +1 -1
  40. package/dist/LinearBasicDisplay/components/SetMaxHeight.d.ts +2 -1
  41. package/dist/LinearBasicDisplay/components/SetMaxHeight.js +0 -1
  42. package/dist/LinearBasicDisplay/configSchema.d.ts +1 -0
  43. package/dist/LinearBasicDisplay/configSchema.js +1 -1
  44. package/dist/LinearBasicDisplay/index.js +0 -1
  45. package/dist/LinearBasicDisplay/model.d.ts +67 -66
  46. package/dist/LinearBasicDisplay/model.js +1 -1
  47. package/dist/LinearGenomeView/components/CenterLine.d.ts +2 -1
  48. package/dist/LinearGenomeView/components/CenterLine.js +0 -1
  49. package/dist/LinearGenomeView/components/Cytobands.d.ts +2 -1
  50. package/dist/LinearGenomeView/components/Cytobands.js +0 -1
  51. package/dist/LinearGenomeView/components/ExportSvgDialog.d.ts +2 -1
  52. package/dist/LinearGenomeView/components/ExportSvgDialog.js +0 -1
  53. package/dist/LinearGenomeView/components/GetSequenceDialog.d.ts +2 -1
  54. package/dist/LinearGenomeView/components/GetSequenceDialog.js +0 -1
  55. package/dist/LinearGenomeView/components/Gridlines.d.ts +2 -1
  56. package/dist/LinearGenomeView/components/Gridlines.js +0 -1
  57. package/dist/LinearGenomeView/components/Header.d.ts +2 -1
  58. package/dist/LinearGenomeView/components/Header.js +0 -1
  59. package/dist/LinearGenomeView/components/ImportForm.d.ts +2 -1
  60. package/dist/LinearGenomeView/components/ImportForm.js +0 -1
  61. package/dist/LinearGenomeView/components/LinearGenomeView.d.ts +2 -1
  62. package/dist/LinearGenomeView/components/LinearGenomeView.js +28 -5
  63. package/dist/LinearGenomeView/components/MiniControls.d.ts +3 -2
  64. package/dist/LinearGenomeView/components/MiniControls.js +20 -41
  65. package/dist/LinearGenomeView/components/OverviewRubberband.d.ts +1 -1
  66. package/dist/LinearGenomeView/components/OverviewRubberband.js +0 -1
  67. package/dist/LinearGenomeView/components/OverviewScalebar.d.ts +2 -2
  68. package/dist/LinearGenomeView/components/OverviewScalebar.js +10 -5
  69. package/dist/LinearGenomeView/components/RefNameAutocomplete/AutocompleteTextField.d.ts +10 -0
  70. package/dist/LinearGenomeView/components/RefNameAutocomplete/AutocompleteTextField.js +21 -0
  71. package/dist/LinearGenomeView/components/RefNameAutocomplete/EndAdornment.d.ts +5 -0
  72. package/dist/LinearGenomeView/components/RefNameAutocomplete/EndAdornment.js +51 -0
  73. package/dist/LinearGenomeView/components/{HelpDialog.d.ts → RefNameAutocomplete/HelpDialog.d.ts} +2 -1
  74. package/dist/LinearGenomeView/components/{HelpDialog.js → RefNameAutocomplete/HelpDialog.js} +0 -1
  75. package/dist/LinearGenomeView/components/RefNameAutocomplete/index.d.ts +18 -0
  76. package/dist/LinearGenomeView/components/RefNameAutocomplete/index.js +110 -0
  77. package/dist/LinearGenomeView/components/RefNameAutocomplete/util.d.ts +12 -0
  78. package/dist/LinearGenomeView/components/RefNameAutocomplete/util.js +58 -0
  79. package/dist/LinearGenomeView/components/Rubberband.d.ts +1 -1
  80. package/dist/LinearGenomeView/components/Rubberband.js +0 -1
  81. package/dist/LinearGenomeView/components/RubberbandSpan.d.ts +2 -1
  82. package/dist/LinearGenomeView/components/RubberbandSpan.js +0 -1
  83. package/dist/LinearGenomeView/components/Scalebar.js +0 -1
  84. package/dist/LinearGenomeView/components/SearchBox.d.ts +2 -1
  85. package/dist/LinearGenomeView/components/SearchBox.js +0 -1
  86. package/dist/LinearGenomeView/components/SearchResultsDialog.d.ts +2 -1
  87. package/dist/LinearGenomeView/components/SearchResultsDialog.js +0 -1
  88. package/dist/LinearGenomeView/components/SearchResultsTable.d.ts +2 -1
  89. package/dist/LinearGenomeView/components/SearchResultsTable.js +0 -1
  90. package/dist/LinearGenomeView/components/SequenceSearchDialog.d.ts +2 -1
  91. package/dist/LinearGenomeView/components/SequenceSearchDialog.js +0 -1
  92. package/dist/LinearGenomeView/components/TrackContainer.d.ts +3 -3
  93. package/dist/LinearGenomeView/components/TrackContainer.js +12 -69
  94. package/dist/LinearGenomeView/components/TrackLabel.js +7 -12
  95. package/dist/LinearGenomeView/components/TrackLabelContainer.d.ts +9 -0
  96. package/dist/LinearGenomeView/components/TrackLabelContainer.js +31 -0
  97. package/dist/LinearGenomeView/components/TrackRenderingContainer.d.ts +10 -0
  98. package/dist/LinearGenomeView/components/TrackRenderingContainer.js +73 -0
  99. package/dist/LinearGenomeView/components/TracksContainer.d.ts +1 -1
  100. package/dist/LinearGenomeView/components/TracksContainer.js +2 -3
  101. package/dist/LinearGenomeView/components/VerticalGuide.d.ts +2 -1
  102. package/dist/LinearGenomeView/components/VerticalGuide.js +0 -1
  103. package/dist/LinearGenomeView/components/ZoomControls.d.ts +2 -1
  104. package/dist/LinearGenomeView/components/ZoomControls.js +0 -1
  105. package/dist/LinearGenomeView/components/hooks.js +0 -1
  106. package/dist/LinearGenomeView/components/util.js +0 -1
  107. package/dist/LinearGenomeView/index.js +0 -1
  108. package/dist/LinearGenomeView/model.d.ts +13 -12
  109. package/dist/LinearGenomeView/model.js +25 -26
  110. package/dist/LinearGenomeView/svgcomponents/SVGBackground.d.ts +2 -1
  111. package/dist/LinearGenomeView/svgcomponents/SVGBackground.js +0 -1
  112. package/dist/LinearGenomeView/svgcomponents/SVGHeader.d.ts +3 -4
  113. package/dist/LinearGenomeView/svgcomponents/SVGHeader.js +7 -3
  114. package/dist/LinearGenomeView/svgcomponents/SVGLinearGenomeView.js +1 -2
  115. package/dist/LinearGenomeView/svgcomponents/SVGRegionSeparators.d.ts +2 -1
  116. package/dist/LinearGenomeView/svgcomponents/SVGRegionSeparators.js +0 -1
  117. package/dist/LinearGenomeView/svgcomponents/SVGRuler.d.ts +2 -1
  118. package/dist/LinearGenomeView/svgcomponents/SVGRuler.js +0 -1
  119. package/dist/LinearGenomeView/svgcomponents/SVGScalebar.d.ts +2 -1
  120. package/dist/LinearGenomeView/svgcomponents/SVGScalebar.js +0 -1
  121. package/dist/LinearGenomeView/svgcomponents/SVGTrackLabel.d.ts +2 -1
  122. package/dist/LinearGenomeView/svgcomponents/SVGTrackLabel.js +0 -1
  123. package/dist/LinearGenomeView/svgcomponents/SVGTracks.d.ts +2 -1
  124. package/dist/LinearGenomeView/svgcomponents/SVGTracks.js +0 -1
  125. package/dist/LinearGenomeView/util.d.ts +2 -2
  126. package/dist/LinearGenomeView/util.js +0 -1
  127. package/dist/index.d.ts +160 -134
  128. package/dist/index.js +6 -4
  129. package/esm/BaseLinearDisplay/components/BaseLinearDisplay.d.ts +1 -1
  130. package/esm/BaseLinearDisplay/components/BaseLinearDisplay.js +0 -1
  131. package/esm/BaseLinearDisplay/components/Block.d.ts +3 -3
  132. package/esm/BaseLinearDisplay/components/Block.js +0 -1
  133. package/esm/BaseLinearDisplay/components/BlockMsg.d.ts +1 -1
  134. package/esm/BaseLinearDisplay/components/BlockMsg.js +0 -1
  135. package/esm/BaseLinearDisplay/components/LinearBlocks.d.ts +3 -2
  136. package/esm/BaseLinearDisplay/components/LinearBlocks.js +0 -1
  137. package/esm/BaseLinearDisplay/components/ServerSideRenderedBlockContent.js +0 -1
  138. package/esm/BaseLinearDisplay/components/TooLargeMessage.d.ts +2 -1
  139. package/esm/BaseLinearDisplay/components/TooLargeMessage.js +0 -1
  140. package/esm/BaseLinearDisplay/components/Tooltip.d.ts +2 -1
  141. package/esm/BaseLinearDisplay/components/Tooltip.js +0 -1
  142. package/esm/BaseLinearDisplay/index.d.ts +5 -2
  143. package/esm/BaseLinearDisplay/index.js +3 -1
  144. package/esm/BaseLinearDisplay/models/BaseLinearDisplayModel.d.ts +62 -142
  145. package/esm/BaseLinearDisplay/models/BaseLinearDisplayModel.js +36 -335
  146. package/esm/BaseLinearDisplay/models/FeatureDensityMixin.d.ts +99 -0
  147. package/esm/BaseLinearDisplay/models/FeatureDensityMixin.js +183 -0
  148. package/esm/BaseLinearDisplay/models/TrackHeightMixin.d.ts +30 -0
  149. package/esm/BaseLinearDisplay/models/TrackHeightMixin.js +52 -0
  150. package/esm/BaseLinearDisplay/models/autorunFeatureDensityStats.d.ts +2 -0
  151. package/esm/BaseLinearDisplay/models/autorunFeatureDensityStats.js +38 -0
  152. package/esm/BaseLinearDisplay/models/configSchema.js +1 -1
  153. package/esm/BaseLinearDisplay/models/renderSvg.d.ts +8 -0
  154. package/esm/BaseLinearDisplay/models/renderSvg.js +53 -0
  155. package/esm/BaseLinearDisplay/models/serverSideRenderedBlock.js +20 -17
  156. package/esm/BaseLinearDisplay/models/util.js +0 -1
  157. package/esm/BasicTrack/configSchema.js +1 -1
  158. package/esm/BasicTrack/index.js +0 -1
  159. package/esm/FeatureTrack/configSchema.d.ts +1 -3
  160. package/esm/FeatureTrack/configSchema.js +1 -1
  161. package/esm/FeatureTrack/index.js +0 -1
  162. package/esm/LaunchLinearGenomeView/index.js +0 -1
  163. package/esm/LinearBareDisplay/configSchema.d.ts +1 -0
  164. package/esm/LinearBareDisplay/configSchema.js +1 -1
  165. package/esm/LinearBareDisplay/index.js +0 -1
  166. package/esm/LinearBareDisplay/model.d.ts +52 -39
  167. package/esm/LinearBareDisplay/model.js +1 -1
  168. package/esm/LinearBasicDisplay/components/SetMaxHeight.d.ts +2 -1
  169. package/esm/LinearBasicDisplay/components/SetMaxHeight.js +0 -1
  170. package/esm/LinearBasicDisplay/configSchema.d.ts +1 -0
  171. package/esm/LinearBasicDisplay/configSchema.js +1 -1
  172. package/esm/LinearBasicDisplay/index.js +0 -1
  173. package/esm/LinearBasicDisplay/model.d.ts +67 -66
  174. package/esm/LinearBasicDisplay/model.js +1 -1
  175. package/esm/LinearGenomeView/components/CenterLine.d.ts +2 -1
  176. package/esm/LinearGenomeView/components/CenterLine.js +0 -1
  177. package/esm/LinearGenomeView/components/Cytobands.d.ts +2 -1
  178. package/esm/LinearGenomeView/components/Cytobands.js +0 -1
  179. package/esm/LinearGenomeView/components/ExportSvgDialog.d.ts +2 -1
  180. package/esm/LinearGenomeView/components/ExportSvgDialog.js +0 -1
  181. package/esm/LinearGenomeView/components/GetSequenceDialog.d.ts +2 -1
  182. package/esm/LinearGenomeView/components/GetSequenceDialog.js +0 -1
  183. package/esm/LinearGenomeView/components/Gridlines.d.ts +2 -1
  184. package/esm/LinearGenomeView/components/Gridlines.js +0 -1
  185. package/esm/LinearGenomeView/components/Header.d.ts +2 -1
  186. package/esm/LinearGenomeView/components/Header.js +0 -1
  187. package/esm/LinearGenomeView/components/ImportForm.d.ts +2 -1
  188. package/esm/LinearGenomeView/components/ImportForm.js +0 -1
  189. package/esm/LinearGenomeView/components/LinearGenomeView.d.ts +2 -1
  190. package/esm/LinearGenomeView/components/LinearGenomeView.js +4 -4
  191. package/esm/LinearGenomeView/components/MiniControls.d.ts +3 -2
  192. package/esm/LinearGenomeView/components/MiniControls.js +20 -18
  193. package/esm/LinearGenomeView/components/OverviewRubberband.d.ts +1 -1
  194. package/esm/LinearGenomeView/components/OverviewRubberband.js +0 -1
  195. package/esm/LinearGenomeView/components/OverviewScalebar.d.ts +2 -2
  196. package/esm/LinearGenomeView/components/OverviewScalebar.js +10 -5
  197. package/esm/LinearGenomeView/components/RefNameAutocomplete/AutocompleteTextField.d.ts +10 -0
  198. package/esm/LinearGenomeView/components/RefNameAutocomplete/AutocompleteTextField.js +15 -0
  199. package/esm/LinearGenomeView/components/RefNameAutocomplete/EndAdornment.d.ts +5 -0
  200. package/esm/LinearGenomeView/components/RefNameAutocomplete/EndAdornment.js +22 -0
  201. package/esm/LinearGenomeView/components/{HelpDialog.d.ts → RefNameAutocomplete/HelpDialog.d.ts} +2 -1
  202. package/esm/LinearGenomeView/components/{HelpDialog.js → RefNameAutocomplete/HelpDialog.js} +0 -1
  203. package/esm/LinearGenomeView/components/RefNameAutocomplete/index.d.ts +18 -0
  204. package/esm/LinearGenomeView/components/RefNameAutocomplete/index.js +82 -0
  205. package/esm/LinearGenomeView/components/RefNameAutocomplete/util.d.ts +12 -0
  206. package/esm/LinearGenomeView/components/RefNameAutocomplete/util.js +49 -0
  207. package/esm/LinearGenomeView/components/Rubberband.d.ts +1 -1
  208. package/esm/LinearGenomeView/components/Rubberband.js +0 -1
  209. package/esm/LinearGenomeView/components/RubberbandSpan.d.ts +2 -1
  210. package/esm/LinearGenomeView/components/RubberbandSpan.js +0 -1
  211. package/esm/LinearGenomeView/components/Scalebar.js +0 -1
  212. package/esm/LinearGenomeView/components/SearchBox.d.ts +2 -1
  213. package/esm/LinearGenomeView/components/SearchBox.js +0 -1
  214. package/esm/LinearGenomeView/components/SearchResultsDialog.d.ts +2 -1
  215. package/esm/LinearGenomeView/components/SearchResultsDialog.js +0 -1
  216. package/esm/LinearGenomeView/components/SearchResultsTable.d.ts +2 -1
  217. package/esm/LinearGenomeView/components/SearchResultsTable.js +0 -1
  218. package/esm/LinearGenomeView/components/SequenceSearchDialog.d.ts +2 -1
  219. package/esm/LinearGenomeView/components/SequenceSearchDialog.js +0 -1
  220. package/esm/LinearGenomeView/components/TrackContainer.d.ts +3 -3
  221. package/esm/LinearGenomeView/components/TrackContainer.js +13 -70
  222. package/esm/LinearGenomeView/components/TrackLabel.js +7 -12
  223. package/esm/LinearGenomeView/components/TrackLabelContainer.d.ts +9 -0
  224. package/esm/LinearGenomeView/components/TrackLabelContainer.js +26 -0
  225. package/esm/LinearGenomeView/components/TrackRenderingContainer.d.ts +10 -0
  226. package/esm/LinearGenomeView/components/TrackRenderingContainer.js +48 -0
  227. package/esm/LinearGenomeView/components/TracksContainer.d.ts +1 -1
  228. package/esm/LinearGenomeView/components/TracksContainer.js +2 -3
  229. package/esm/LinearGenomeView/components/VerticalGuide.d.ts +2 -1
  230. package/esm/LinearGenomeView/components/VerticalGuide.js +0 -1
  231. package/esm/LinearGenomeView/components/ZoomControls.d.ts +2 -1
  232. package/esm/LinearGenomeView/components/ZoomControls.js +0 -1
  233. package/esm/LinearGenomeView/components/hooks.js +0 -1
  234. package/esm/LinearGenomeView/components/util.js +0 -1
  235. package/esm/LinearGenomeView/index.js +0 -1
  236. package/esm/LinearGenomeView/model.d.ts +13 -12
  237. package/esm/LinearGenomeView/model.js +21 -22
  238. package/esm/LinearGenomeView/svgcomponents/SVGBackground.d.ts +2 -1
  239. package/esm/LinearGenomeView/svgcomponents/SVGBackground.js +0 -1
  240. package/esm/LinearGenomeView/svgcomponents/SVGHeader.d.ts +3 -4
  241. package/esm/LinearGenomeView/svgcomponents/SVGHeader.js +7 -3
  242. package/esm/LinearGenomeView/svgcomponents/SVGLinearGenomeView.js +1 -2
  243. package/esm/LinearGenomeView/svgcomponents/SVGRegionSeparators.d.ts +2 -1
  244. package/esm/LinearGenomeView/svgcomponents/SVGRegionSeparators.js +0 -1
  245. package/esm/LinearGenomeView/svgcomponents/SVGRuler.d.ts +2 -1
  246. package/esm/LinearGenomeView/svgcomponents/SVGRuler.js +0 -1
  247. package/esm/LinearGenomeView/svgcomponents/SVGScalebar.d.ts +2 -1
  248. package/esm/LinearGenomeView/svgcomponents/SVGScalebar.js +0 -1
  249. package/esm/LinearGenomeView/svgcomponents/SVGTrackLabel.d.ts +2 -1
  250. package/esm/LinearGenomeView/svgcomponents/SVGTrackLabel.js +0 -1
  251. package/esm/LinearGenomeView/svgcomponents/SVGTracks.d.ts +2 -1
  252. package/esm/LinearGenomeView/svgcomponents/SVGTracks.js +0 -1
  253. package/esm/LinearGenomeView/util.d.ts +2 -2
  254. package/esm/LinearGenomeView/util.js +0 -1
  255. package/esm/index.d.ts +160 -134
  256. package/esm/index.js +1 -2
  257. package/package.json +3 -4
  258. package/dist/BaseLinearDisplay/components/BaseLinearDisplay.js.map +0 -1
  259. package/dist/BaseLinearDisplay/components/Block.js.map +0 -1
  260. package/dist/BaseLinearDisplay/components/BlockMsg.js.map +0 -1
  261. package/dist/BaseLinearDisplay/components/LinearBlocks.js.map +0 -1
  262. package/dist/BaseLinearDisplay/components/ServerSideRenderedBlockContent.js.map +0 -1
  263. package/dist/BaseLinearDisplay/components/TooLargeMessage.js.map +0 -1
  264. package/dist/BaseLinearDisplay/components/Tooltip.js.map +0 -1
  265. package/dist/BaseLinearDisplay/index.js.map +0 -1
  266. package/dist/BaseLinearDisplay/models/BaseLinearDisplayModel.js.map +0 -1
  267. package/dist/BaseLinearDisplay/models/configSchema.js.map +0 -1
  268. package/dist/BaseLinearDisplay/models/serverSideRenderedBlock.js.map +0 -1
  269. package/dist/BaseLinearDisplay/models/util.js.map +0 -1
  270. package/dist/BasicTrack/configSchema.js.map +0 -1
  271. package/dist/BasicTrack/index.js.map +0 -1
  272. package/dist/FeatureTrack/configSchema.js.map +0 -1
  273. package/dist/FeatureTrack/index.js.map +0 -1
  274. package/dist/LaunchLinearGenomeView/index.js.map +0 -1
  275. package/dist/LinearBareDisplay/configSchema.js.map +0 -1
  276. package/dist/LinearBareDisplay/index.js.map +0 -1
  277. package/dist/LinearBareDisplay/model.js.map +0 -1
  278. package/dist/LinearBasicDisplay/components/SetMaxHeight.js.map +0 -1
  279. package/dist/LinearBasicDisplay/configSchema.js.map +0 -1
  280. package/dist/LinearBasicDisplay/index.js.map +0 -1
  281. package/dist/LinearBasicDisplay/model.js.map +0 -1
  282. package/dist/LinearGenomeView/components/CenterLine.js.map +0 -1
  283. package/dist/LinearGenomeView/components/Cytobands.js.map +0 -1
  284. package/dist/LinearGenomeView/components/ExportSvgDialog.js.map +0 -1
  285. package/dist/LinearGenomeView/components/GetSequenceDialog.js.map +0 -1
  286. package/dist/LinearGenomeView/components/Gridlines.js.map +0 -1
  287. package/dist/LinearGenomeView/components/Header.js.map +0 -1
  288. package/dist/LinearGenomeView/components/HelpDialog.js.map +0 -1
  289. package/dist/LinearGenomeView/components/ImportForm.js.map +0 -1
  290. package/dist/LinearGenomeView/components/LinearGenomeView.js.map +0 -1
  291. package/dist/LinearGenomeView/components/MiniControls.js.map +0 -1
  292. package/dist/LinearGenomeView/components/OverviewRubberband.js.map +0 -1
  293. package/dist/LinearGenomeView/components/OverviewScalebar.js.map +0 -1
  294. package/dist/LinearGenomeView/components/RefNameAutocomplete.d.ts +0 -23
  295. package/dist/LinearGenomeView/components/RefNameAutocomplete.js +0 -189
  296. package/dist/LinearGenomeView/components/RefNameAutocomplete.js.map +0 -1
  297. package/dist/LinearGenomeView/components/Rubberband.js.map +0 -1
  298. package/dist/LinearGenomeView/components/RubberbandSpan.js.map +0 -1
  299. package/dist/LinearGenomeView/components/Scalebar.js.map +0 -1
  300. package/dist/LinearGenomeView/components/SearchBox.js.map +0 -1
  301. package/dist/LinearGenomeView/components/SearchResultsDialog.js.map +0 -1
  302. package/dist/LinearGenomeView/components/SearchResultsTable.js.map +0 -1
  303. package/dist/LinearGenomeView/components/SequenceSearchDialog.js.map +0 -1
  304. package/dist/LinearGenomeView/components/TrackContainer.js.map +0 -1
  305. package/dist/LinearGenomeView/components/TrackLabel.js.map +0 -1
  306. package/dist/LinearGenomeView/components/TracksContainer.js.map +0 -1
  307. package/dist/LinearGenomeView/components/VerticalGuide.js.map +0 -1
  308. package/dist/LinearGenomeView/components/ZoomControls.js.map +0 -1
  309. package/dist/LinearGenomeView/components/hooks.js.map +0 -1
  310. package/dist/LinearGenomeView/components/util.js.map +0 -1
  311. package/dist/LinearGenomeView/index.js.map +0 -1
  312. package/dist/LinearGenomeView/model.js.map +0 -1
  313. package/dist/LinearGenomeView/svgcomponents/SVGBackground.js.map +0 -1
  314. package/dist/LinearGenomeView/svgcomponents/SVGHeader.js.map +0 -1
  315. package/dist/LinearGenomeView/svgcomponents/SVGLinearGenomeView.js.map +0 -1
  316. package/dist/LinearGenomeView/svgcomponents/SVGRegionSeparators.js.map +0 -1
  317. package/dist/LinearGenomeView/svgcomponents/SVGRuler.js.map +0 -1
  318. package/dist/LinearGenomeView/svgcomponents/SVGScalebar.js.map +0 -1
  319. package/dist/LinearGenomeView/svgcomponents/SVGTrackLabel.js.map +0 -1
  320. package/dist/LinearGenomeView/svgcomponents/SVGTracks.js.map +0 -1
  321. package/dist/LinearGenomeView/util.js.map +0 -1
  322. package/dist/index.js.map +0 -1
  323. package/esm/BaseLinearDisplay/components/BaseLinearDisplay.js.map +0 -1
  324. package/esm/BaseLinearDisplay/components/Block.js.map +0 -1
  325. package/esm/BaseLinearDisplay/components/BlockMsg.js.map +0 -1
  326. package/esm/BaseLinearDisplay/components/LinearBlocks.js.map +0 -1
  327. package/esm/BaseLinearDisplay/components/ServerSideRenderedBlockContent.js.map +0 -1
  328. package/esm/BaseLinearDisplay/components/TooLargeMessage.js.map +0 -1
  329. package/esm/BaseLinearDisplay/components/Tooltip.js.map +0 -1
  330. package/esm/BaseLinearDisplay/index.js.map +0 -1
  331. package/esm/BaseLinearDisplay/models/BaseLinearDisplayModel.js.map +0 -1
  332. package/esm/BaseLinearDisplay/models/configSchema.js.map +0 -1
  333. package/esm/BaseLinearDisplay/models/serverSideRenderedBlock.js.map +0 -1
  334. package/esm/BaseLinearDisplay/models/util.js.map +0 -1
  335. package/esm/BasicTrack/configSchema.js.map +0 -1
  336. package/esm/BasicTrack/index.js.map +0 -1
  337. package/esm/FeatureTrack/configSchema.js.map +0 -1
  338. package/esm/FeatureTrack/index.js.map +0 -1
  339. package/esm/LaunchLinearGenomeView/index.js.map +0 -1
  340. package/esm/LinearBareDisplay/configSchema.js.map +0 -1
  341. package/esm/LinearBareDisplay/index.js.map +0 -1
  342. package/esm/LinearBareDisplay/model.js.map +0 -1
  343. package/esm/LinearBasicDisplay/components/SetMaxHeight.js.map +0 -1
  344. package/esm/LinearBasicDisplay/configSchema.js.map +0 -1
  345. package/esm/LinearBasicDisplay/index.js.map +0 -1
  346. package/esm/LinearBasicDisplay/model.js.map +0 -1
  347. package/esm/LinearGenomeView/components/CenterLine.js.map +0 -1
  348. package/esm/LinearGenomeView/components/Cytobands.js.map +0 -1
  349. package/esm/LinearGenomeView/components/ExportSvgDialog.js.map +0 -1
  350. package/esm/LinearGenomeView/components/GetSequenceDialog.js.map +0 -1
  351. package/esm/LinearGenomeView/components/Gridlines.js.map +0 -1
  352. package/esm/LinearGenomeView/components/Header.js.map +0 -1
  353. package/esm/LinearGenomeView/components/HelpDialog.js.map +0 -1
  354. package/esm/LinearGenomeView/components/ImportForm.js.map +0 -1
  355. package/esm/LinearGenomeView/components/LinearGenomeView.js.map +0 -1
  356. package/esm/LinearGenomeView/components/MiniControls.js.map +0 -1
  357. package/esm/LinearGenomeView/components/OverviewRubberband.js.map +0 -1
  358. package/esm/LinearGenomeView/components/OverviewScalebar.js.map +0 -1
  359. package/esm/LinearGenomeView/components/RefNameAutocomplete.d.ts +0 -23
  360. package/esm/LinearGenomeView/components/RefNameAutocomplete.js +0 -161
  361. package/esm/LinearGenomeView/components/RefNameAutocomplete.js.map +0 -1
  362. package/esm/LinearGenomeView/components/Rubberband.js.map +0 -1
  363. package/esm/LinearGenomeView/components/RubberbandSpan.js.map +0 -1
  364. package/esm/LinearGenomeView/components/Scalebar.js.map +0 -1
  365. package/esm/LinearGenomeView/components/SearchBox.js.map +0 -1
  366. package/esm/LinearGenomeView/components/SearchResultsDialog.js.map +0 -1
  367. package/esm/LinearGenomeView/components/SearchResultsTable.js.map +0 -1
  368. package/esm/LinearGenomeView/components/SequenceSearchDialog.js.map +0 -1
  369. package/esm/LinearGenomeView/components/TrackContainer.js.map +0 -1
  370. package/esm/LinearGenomeView/components/TrackLabel.js.map +0 -1
  371. package/esm/LinearGenomeView/components/TracksContainer.js.map +0 -1
  372. package/esm/LinearGenomeView/components/VerticalGuide.js.map +0 -1
  373. package/esm/LinearGenomeView/components/ZoomControls.js.map +0 -1
  374. package/esm/LinearGenomeView/components/hooks.js.map +0 -1
  375. package/esm/LinearGenomeView/components/util.js.map +0 -1
  376. package/esm/LinearGenomeView/index.js.map +0 -1
  377. package/esm/LinearGenomeView/model.js.map +0 -1
  378. package/esm/LinearGenomeView/svgcomponents/SVGBackground.js.map +0 -1
  379. package/esm/LinearGenomeView/svgcomponents/SVGHeader.js.map +0 -1
  380. package/esm/LinearGenomeView/svgcomponents/SVGLinearGenomeView.js.map +0 -1
  381. package/esm/LinearGenomeView/svgcomponents/SVGRegionSeparators.js.map +0 -1
  382. package/esm/LinearGenomeView/svgcomponents/SVGRuler.js.map +0 -1
  383. package/esm/LinearGenomeView/svgcomponents/SVGScalebar.js.map +0 -1
  384. package/esm/LinearGenomeView/svgcomponents/SVGTrackLabel.js.map +0 -1
  385. package/esm/LinearGenomeView/svgcomponents/SVGTracks.js.map +0 -1
  386. package/esm/LinearGenomeView/util.js.map +0 -1
  387. package/esm/index.js.map +0 -1
  388. package/src/BaseLinearDisplay/components/BaseLinearDisplay.tsx +0 -117
  389. package/src/BaseLinearDisplay/components/Block.tsx +0 -77
  390. package/src/BaseLinearDisplay/components/BlockMsg.tsx +0 -42
  391. package/src/BaseLinearDisplay/components/LinearBlocks.tsx +0 -119
  392. package/src/BaseLinearDisplay/components/ServerSideRenderedBlockContent.tsx +0 -69
  393. package/src/BaseLinearDisplay/components/TooLargeMessage.tsx +0 -36
  394. package/src/BaseLinearDisplay/components/Tooltip.tsx +0 -107
  395. package/src/BaseLinearDisplay/index.ts +0 -12
  396. package/src/BaseLinearDisplay/models/BaseLinearDisplayModel.tsx +0 -768
  397. package/src/BaseLinearDisplay/models/configSchema.ts +0 -59
  398. package/src/BaseLinearDisplay/models/serverSideRenderedBlock.ts +0 -318
  399. package/src/BaseLinearDisplay/models/util.ts +0 -67
  400. package/src/BasicTrack/configSchema.ts +0 -23
  401. package/src/BasicTrack/index.ts +0 -18
  402. package/src/FeatureTrack/configSchema.ts +0 -27
  403. package/src/FeatureTrack/index.ts +0 -18
  404. package/src/LaunchLinearGenomeView/index.ts +0 -66
  405. package/src/LinearBareDisplay/configSchema.ts +0 -27
  406. package/src/LinearBareDisplay/index.test.js +0 -34
  407. package/src/LinearBareDisplay/index.ts +0 -25
  408. package/src/LinearBareDisplay/model.ts +0 -53
  409. package/src/LinearBasicDisplay/components/SetMaxHeight.tsx +0 -73
  410. package/src/LinearBasicDisplay/configSchema.ts +0 -27
  411. package/src/LinearBasicDisplay/index.ts +0 -25
  412. package/src/LinearBasicDisplay/model.ts +0 -214
  413. package/src/LinearGenomeView/README.md +0 -9
  414. package/src/LinearGenomeView/components/CenterLine.tsx +0 -65
  415. package/src/LinearGenomeView/components/Cytobands.tsx +0 -154
  416. package/src/LinearGenomeView/components/ExportSvgDialog.tsx +0 -149
  417. package/src/LinearGenomeView/components/GetSequenceDialog.tsx +0 -269
  418. package/src/LinearGenomeView/components/Gridlines.tsx +0 -119
  419. package/src/LinearGenomeView/components/Header.tsx +0 -126
  420. package/src/LinearGenomeView/components/HelpDialog.tsx +0 -69
  421. package/src/LinearGenomeView/components/ImportForm.tsx +0 -217
  422. package/src/LinearGenomeView/components/LinearGenomeView.test.tsx +0 -167
  423. package/src/LinearGenomeView/components/LinearGenomeView.tsx +0 -72
  424. package/src/LinearGenomeView/components/MiniControls.tsx +0 -55
  425. package/src/LinearGenomeView/components/OverviewRubberband.tsx +0 -219
  426. package/src/LinearGenomeView/components/OverviewScalebar.tsx +0 -345
  427. package/src/LinearGenomeView/components/RefNameAutocomplete.tsx +0 -321
  428. package/src/LinearGenomeView/components/Rubberband.tsx +0 -89
  429. package/src/LinearGenomeView/components/RubberbandSpan.tsx +0 -99
  430. package/src/LinearGenomeView/components/Scalebar.test.tsx +0 -145
  431. package/src/LinearGenomeView/components/Scalebar.tsx +0 -199
  432. package/src/LinearGenomeView/components/SearchBox.tsx +0 -123
  433. package/src/LinearGenomeView/components/SearchResultsDialog.tsx +0 -57
  434. package/src/LinearGenomeView/components/SearchResultsTable.tsx +0 -121
  435. package/src/LinearGenomeView/components/SequenceSearchDialog.tsx +0 -136
  436. package/src/LinearGenomeView/components/TrackContainer.tsx +0 -180
  437. package/src/LinearGenomeView/components/TrackLabel.tsx +0 -143
  438. package/src/LinearGenomeView/components/TracksContainer.tsx +0 -114
  439. package/src/LinearGenomeView/components/VerticalGuide.tsx +0 -37
  440. package/src/LinearGenomeView/components/ZoomControls.tsx +0 -62
  441. package/src/LinearGenomeView/components/__snapshots__/LinearGenomeView.test.tsx.snap +0 -1520
  442. package/src/LinearGenomeView/components/hooks.ts +0 -306
  443. package/src/LinearGenomeView/components/util.ts +0 -76
  444. package/src/LinearGenomeView/hg38DisplayedRegions.json +0 -3187
  445. package/src/LinearGenomeView/index.test.ts +0 -993
  446. package/src/LinearGenomeView/index.ts +0 -17
  447. package/src/LinearGenomeView/model.ts +0 -1532
  448. package/src/LinearGenomeView/svgcomponents/SVGBackground.tsx +0 -21
  449. package/src/LinearGenomeView/svgcomponents/SVGHeader.tsx +0 -93
  450. package/src/LinearGenomeView/svgcomponents/SVGLinearGenomeView.tsx +0 -114
  451. package/src/LinearGenomeView/svgcomponents/SVGRegionSeparators.tsx +0 -31
  452. package/src/LinearGenomeView/svgcomponents/SVGRuler.tsx +0 -125
  453. package/src/LinearGenomeView/svgcomponents/SVGScalebar.tsx +0 -57
  454. package/src/LinearGenomeView/svgcomponents/SVGTrackLabel.tsx +0 -47
  455. package/src/LinearGenomeView/svgcomponents/SVGTracks.tsx +0 -67
  456. package/src/LinearGenomeView/util.test.ts +0 -33
  457. package/src/LinearGenomeView/util.ts +0 -182
  458. package/src/LinearGenomeView/volvoxDisplayedRegions.json +0 -16
  459. package/src/index.ts +0 -85
@@ -42,4 +42,3 @@ export default function SVGRuler({ model, fontSize, }) {
42
42
  React.createElement(Ruler, { hideText: !renderRuler, start: start, end: end, bpPerPx: bpPerPx, reversed: reversed }))))));
43
43
  })));
44
44
  }
45
- //# sourceMappingURL=SVGRuler.js.map
@@ -1,7 +1,8 @@
1
+ import React from 'react';
1
2
  import { LinearGenomeViewModel } from '..';
2
3
  type LGV = LinearGenomeViewModel;
3
4
  export default function SVGScalebar({ model, fontSize, }: {
4
5
  model: LGV;
5
6
  fontSize: number;
6
- }): JSX.Element;
7
+ }): React.JSX.Element;
7
8
  export {};
@@ -13,4 +13,3 @@ export default function SVGScalebar({ model, fontSize, }) {
13
13
  React.createElement("line", { x1: x1, x2: x1, y1: 5, y2: 15, stroke: theme.palette.text.secondary }),
14
14
  React.createElement("text", { x: x0 + (x1 - x0) / 2, y: fontSize * 2, textAnchor: "middle", fontSize: fontSize, fill: theme.palette.text.primary }, displayBp)));
15
15
  }
16
- //# sourceMappingURL=SVGScalebar.js.map
@@ -1,7 +1,8 @@
1
+ import React from 'react';
1
2
  export default function SVGTrackLabel({ trackLabels, trackName, fontSize, trackLabelOffset, x, }: {
2
3
  trackName: string;
3
4
  trackLabels: string;
4
5
  fontSize: number;
5
6
  trackLabelOffset: number;
6
7
  x: number;
7
- }): JSX.Element | null;
8
+ }): React.JSX.Element | null;
@@ -7,4 +7,3 @@ export default function SVGTrackLabel({ trackLabels, trackName, fontSize, trackL
7
7
  const yoff = trackLabels === 'offset' ? 5 : 0;
8
8
  return trackLabels !== 'none' ? (React.createElement("g", null, trackLabels === 'left' ? (React.createElement("text", { x: trackLabelOffset - 40, y: 20, fill: fill, fontSize: fontSize, dominantBaseline: "hanging", textAnchor: "end" }, trackName)) : (React.createElement("text", { x: x + xoff, y: yoff, fill: fill, fontSize: fontSize, dominantBaseline: "hanging" }, trackName)))) : null;
9
9
  }
10
- //# sourceMappingURL=SVGTrackLabel.js.map
@@ -1,3 +1,4 @@
1
+ import React from 'react';
1
2
  import { AnyConfigurationModel } from '@jbrowse/core/configuration';
2
3
  import { LinearGenomeViewModel } from '..';
3
4
  type LGV = LinearGenomeViewModel;
@@ -18,5 +19,5 @@ export default function SVGTracks({ displayResults, model, offset, textHeight, f
18
19
  fontSize: number;
19
20
  trackLabels?: string;
20
21
  trackLabelOffset?: number;
21
- }): JSX.Element;
22
+ }): React.JSX.Element;
22
23
  export {};
@@ -21,4 +21,3 @@ export default function SVGTracks({ displayResults, model, offset, textHeight, f
21
21
  React.createElement(SVGTrackLabel, { trackName: trackName, fontSize: fontSize, trackLabels: trackLabels, trackLabelOffset: trackLabelOffset, x: x })));
22
22
  })));
23
23
  }
24
- //# sourceMappingURL=SVGTracks.js.map
@@ -23,10 +23,10 @@ export declare function makeTicks(start: number, end: number, bpPerPx: number, e
23
23
  export declare function generateLocations(regions: ParsedLocString[] | undefined, assemblyManager: AssemblyManager, assemblyName?: string): Promise<{
24
24
  assemblyName: string;
25
25
  parentRegion: import("@jbrowse/core/assemblyManager/assembly").BasicRegion;
26
- refName: string;
27
- start?: number | undefined;
28
26
  end?: number | undefined;
29
27
  reversed?: boolean | undefined;
28
+ start?: number | undefined;
29
+ refName: string;
30
30
  }[]>;
31
31
  /**
32
32
  * Parses locString or space separated set of locStrings into location objects
@@ -135,4 +135,3 @@ export function parseLocStrings(input, assemblyName, isValidRefName) {
135
135
  }
136
136
  }
137
137
  }
138
- //# sourceMappingURL=util.js.map