@jbrowse/plugin-linear-genome-view 1.7.1 → 1.7.5

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Files changed (49) hide show
  1. package/dist/BaseLinearDisplay/components/BaseLinearDisplay.js +18 -18
  2. package/dist/BaseLinearDisplay/components/Block.js +4 -4
  3. package/dist/BaseLinearDisplay/components/LinearBlocks.js +11 -11
  4. package/dist/BaseLinearDisplay/components/ServerSideRenderedBlockContent.js +16 -16
  5. package/dist/BaseLinearDisplay/index.js +2 -2
  6. package/dist/BaseLinearDisplay/models/BaseLinearDisplayModel.d.ts +1 -1
  7. package/dist/BaseLinearDisplay/models/BaseLinearDisplayModel.js +42 -34
  8. package/dist/BaseLinearDisplay/models/serverSideRenderedBlock.d.ts +1 -0
  9. package/dist/BaseLinearDisplay/models/serverSideRenderedBlock.js +11 -9
  10. package/dist/LinearBareDisplay/model.d.ts +1 -1
  11. package/dist/LinearBareDisplay/model.js +1 -1
  12. package/dist/LinearBasicDisplay/components/SetMaxHeight.js +11 -11
  13. package/dist/LinearBasicDisplay/configSchema.js +1 -1
  14. package/dist/LinearBasicDisplay/index.js +2 -2
  15. package/dist/LinearBasicDisplay/model.d.ts +1 -1
  16. package/dist/LinearBasicDisplay/model.js +10 -10
  17. package/dist/LinearGenomeView/components/CenterLine.js +5 -5
  18. package/dist/LinearGenomeView/components/ExportSvgDialog.js +16 -16
  19. package/dist/LinearGenomeView/components/Header.js +20 -20
  20. package/dist/LinearGenomeView/components/HelpDialog.js +4 -4
  21. package/dist/LinearGenomeView/components/ImportForm.js +28 -28
  22. package/dist/LinearGenomeView/components/LinearGenomeView.js +15 -15
  23. package/dist/LinearGenomeView/components/LinearGenomeView.test.js +9 -9
  24. package/dist/LinearGenomeView/components/LinearGenomeViewSvg.js +40 -40
  25. package/dist/LinearGenomeView/components/MiniControls.js +9 -9
  26. package/dist/LinearGenomeView/components/OverviewRubberBand.js +19 -19
  27. package/dist/LinearGenomeView/components/OverviewScaleBar.js +28 -28
  28. package/dist/LinearGenomeView/components/RefNameAutocomplete.js +27 -27
  29. package/dist/LinearGenomeView/components/RubberBand.js +18 -18
  30. package/dist/LinearGenomeView/components/Ruler.js +11 -11
  31. package/dist/LinearGenomeView/components/ScaleBar.js +19 -19
  32. package/dist/LinearGenomeView/components/ScaleBar.test.js +3 -3
  33. package/dist/LinearGenomeView/components/SearchBox.js +9 -9
  34. package/dist/LinearGenomeView/components/SearchResultsDialog.js +15 -15
  35. package/dist/LinearGenomeView/components/SequenceDialog.js +28 -37
  36. package/dist/LinearGenomeView/components/TrackContainer.js +14 -14
  37. package/dist/LinearGenomeView/components/TrackLabel.js +17 -19
  38. package/dist/LinearGenomeView/components/TracksContainer.js +10 -10
  39. package/dist/LinearGenomeView/components/VerticalGuides.js +11 -11
  40. package/dist/LinearGenomeView/components/ZoomControls.js +9 -9
  41. package/dist/LinearGenomeView/index.js +35 -35
  42. package/dist/LinearGenomeView/index.test.js +19 -19
  43. package/dist/index.d.ts +3 -3
  44. package/dist/index.js +18 -18
  45. package/package.json +3 -4
  46. package/src/BaseLinearDisplay/models/BaseLinearDisplayModel.tsx +6 -0
  47. package/src/BaseLinearDisplay/models/serverSideRenderedBlock.ts +3 -0
  48. package/src/LinearGenomeView/components/SequenceDialog.tsx +6 -13
  49. package/src/LinearGenomeView/components/TrackLabel.tsx +6 -6
@@ -78,19 +78,12 @@ async function fetchSequence(
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  const adapterConfig = getConf(assembly, ['sequence', 'adapter'])
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  const sessionId = 'getSequence'
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- const chunks = (await Promise.all(
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- regions.map(region =>
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- rpcManager.call(sessionId, 'CoreGetFeatures', {
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- adapterConfig,
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- region,
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- sessionId,
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- signal,
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- }),
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- ),
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- )) as Feature[][]
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-
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- // assumes that we get whole sequence in a single getFeatures call
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- return chunks.map(chunk => chunk[0])
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+ return rpcManager.call(sessionId, 'CoreGetFeatures', {
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+ adapterConfig,
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+ regions,
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+ sessionId,
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+ signal,
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+ }) as Promise<Feature[]>
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  }
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  function SequenceDialog({
@@ -89,12 +89,12 @@ const TrackLabel = React.forwardRef(
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  let trackName = getConf(track, 'name')
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  if (getConf(track, 'type') === 'ReferenceSequenceTrack') {
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- trackName = 'Reference Sequence'
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- session.assemblies.forEach(assembly => {
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- if (assembly.sequence === trackConf) {
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- trackName = `Reference Sequence (${readConfObject(assembly, 'name')})`
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- }
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- })
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+ const r = session.assemblies.find(a => a.sequence === trackConf)
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+ trackName =
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+ readConfObject(trackConf, 'name') ||
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+ (r
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+ ? `Reference Sequence (${readConfObject(r, 'name')})`
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+ : 'Reference Sequence')
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  }
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  function handleMenuItemClick(_: unknown, callback: Function) {