@jbrowse/plugin-legacy-jbrowse 1.7.0 → 1.7.4

package/dist/JBrowse1Connection/util.d.ts

@@ -1,26 +1,26 @@
-import { Track, Source } from './types';
-export declare function isTrack(arg: any): arg is Track;
-export declare function isSource(arg: any): arg is Source;
-/**
- * updates a with values from b, recursively
- */
-declare type Obj = Record<string, any>;
-export declare function deepUpdate(a: Obj, b: Obj): Obj;
-/**
- * replace variables in a template string with values
- * @param template - String with variable names in curly brackets
- * e.g., `http://foo/{bar}?arg={baz.foo}`
- * @param fillWith - object with attribute-value mappings
- * e.g., `{ 'bar': 'someurl', 'baz': { 'foo': 42 } }`
- * @returns the template string with variables in fillWith replaced
- * e.g., 'htp://foo/someurl?arg=valueforbaz'
- */
-export declare function fillTemplate(template: string, fillWith: Obj): string;
-/**
- * Clones objects (including DOM nodes) and all children.
- * Warning: do not clone cyclic structures
- * (Lifted from dojo https://github.com/dojo/dojo/blob/master/_base/lang.js)
- * @param src - The object to clone
- */
-export declare function clone(src: any): any;
-export {};
+import { Track, Source } from './types';
+export declare function isTrack(arg: any): arg is Track;
+export declare function isSource(arg: any): arg is Source;
+/**
+ * updates a with values from b, recursively
+ */
+declare type Obj = Record<string, any>;
+export declare function deepUpdate(a: Obj, b: Obj): Obj;
+/**
+ * replace variables in a template string with values
+ * @param template - String with variable names in curly brackets
+ * e.g., `http://foo/{bar}?arg={baz.foo}`
+ * @param fillWith - object with attribute-value mappings
+ * e.g., `{ 'bar': 'someurl', 'baz': { 'foo': 42 } }`
+ * @returns the template string with variables in fillWith replaced
+ * e.g., 'htp://foo/someurl?arg=valueforbaz'
+ */
+export declare function fillTemplate(template: string, fillWith: Obj): string;
+/**
+ * Clones objects (including DOM nodes) and all children.
+ * Warning: do not clone cyclic structures
+ * (Lifted from dojo https://github.com/dojo/dojo/blob/master/_base/lang.js)
+ * @param src - The object to clone
+ */
+export declare function clone(src: any): any;
+export {};

package/dist/JBrowse1Connection/util.js

@@ -34,7 +34,7 @@ function deepUpdate(a, b) {
   for (var _i = 0, _Object$keys = Object.keys(b); _i < _Object$keys.length; _i++) {
     var prop = _Object$keys[_i];
 
-    if (prop in a && (0, _typeof2["default"])(b[prop]) === 'object' && (0, _typeof2["default"])(a[prop]) === 'object') {
+    if (prop in a && (0, _typeof2.default)(b[prop]) === 'object' && (0, _typeof2.default)(a[prop]) === 'object') {
       deepUpdate(a[prop], b[prop]);
     } else if (typeof a[prop] === 'undefined' || typeof b[prop] !== 'undefined') {
       a[prop] = b[prop];
@@ -60,7 +60,7 @@ function fillTemplate(template, fillWith) {
   return template.replace(/\{([\w\s.]+)\}/g, function (match, varName) {
     varName = varName.replace(/\s+/g, ''); // remove all whitespace
 
-    var fill = (0, _getValue["default"])(fillWith, varName);
+    var fill = (0, _getValue.default)(fillWith, varName);
 
     if (fill !== undefined) {
       if (typeof fill === 'function') {
@@ -92,7 +92,7 @@ function fillTemplate(template, fillWith) {
 
 
 function clone(src) {
-  if (!src || (0, _typeof2["default"])(src) !== 'object' || Object.prototype.toString.call(src) === '[object Function]') {
+  if (!src || (0, _typeof2.default)(src) !== 'object' || Object.prototype.toString.call(src) === '[object Function]') {
     // null, undefined, any non-object, or function
     return src; // anything
   }

package/dist/JBrowse1TextSeachAdapter/HttpMap.d.ts

@@ -1,39 +1,39 @@
-export default class HttpMap {
-    url: string;
-    constructor(args: {
-        url: string;
-    });
-    /**
-     * loads meta.json file from names directory and reads number of hash_bits used
-     */
-    readMeta(): Promise<{
-        hashHexCharacters: number;
-        compress: any;
-        tracks: any;
-    }>;
-    getHashHexCharacters(): Promise<number>;
-    getCompress(): Promise<any>;
-    getTrackNames(): Promise<any>;
-    /**
-     * Returns contents of a bucket given a key
-     * @param key - string
-     */
-    get(key: string): Promise<any>;
-    /**
-     * Returns a bucket given a key
-     * @param key - string
-     */
-    getBucket(key: string): Promise<any>;
-    /**
-     * Loads a file using the url and provided id.
-     * Returns response object with contents of the file
-     * @param id - string
-     */
-    loadFile(id: string): Promise<any>;
-    /**
-     * Returns the corresponding path of the file given a hex string
-     * @param hex - hex string
-     */
-    hexToDirPath(hex: string): Promise<string>;
-    hash(data: string): string;
-}
+export default class HttpMap {
+    url: string;
+    constructor(args: {
+        url: string;
+    });
+    /**
+     * loads meta.json file from names directory and reads number of hash_bits used
+     */
+    readMeta(): Promise<{
+        hashHexCharacters: number;
+        compress: any;
+        tracks: any;
+    }>;
+    getHashHexCharacters(): Promise<number>;
+    getCompress(): Promise<any>;
+    getTrackNames(): Promise<any>;
+    /**
+     * Returns contents of a bucket given a key
+     * @param key - string
+     */
+    get(key: string): Promise<any>;
+    /**
+     * Returns a bucket given a key
+     * @param key - string
+     */
+    getBucket(key: string): Promise<any>;
+    /**
+     * Loads a file using the url and provided id.
+     * Returns response object with contents of the file
+     * @param id - string
+     */
+    loadFile(id: string): Promise<any>;
+    /**
+     * Returns the corresponding path of the file given a hex string
+     * @param hex - hex string
+     */
+    hexToDirPath(hex: string): Promise<string>;
+    hash(data: string): string;
+}

package/dist/JBrowse1TextSeachAdapter/HttpMap.js

@@ -5,7 +5,7 @@ var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefau
 Object.defineProperty(exports, "__esModule", {
   value: true
 });
-exports["default"] = void 0;
+exports.default = void 0;
 
 var _regenerator = _interopRequireDefault(require("@babel/runtime/regenerator"));
 
@@ -25,8 +25,8 @@ var _bufferCrc = _interopRequireDefault(require("buffer-crc32"));
  */
 var HttpMap = /*#__PURE__*/function () {
   function HttpMap(args) {
-    (0, _classCallCheck2["default"])(this, HttpMap);
-    (0, _defineProperty2["default"])(this, "url", void 0);
+    (0, _classCallCheck2.default)(this, HttpMap);
+    (0, _defineProperty2.default)(this, "url", void 0);
     // make sure url has a trailing slash
     this.url = /\/$/.test(args.url) ? args.url : "".concat(args.url, "/");
   }
@@ -35,12 +35,12 @@ var HttpMap = /*#__PURE__*/function () {
    */
 
 
-  (0, _createClass2["default"])(HttpMap, [{
+  (0, _createClass2.default)(HttpMap, [{
     key: "readMeta",
     value: function () {
-      var _readMeta = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee() {
+      var _readMeta = (0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee() {
         var meta, compress, tracks, hashHexCharacters;
-        return _regenerator["default"].wrap(function _callee$(_context) {
+        return _regenerator.default.wrap(function _callee$(_context) {
           while (1) {
             switch (_context.prev = _context.next) {
               case 0:
@@ -74,9 +74,9 @@ var HttpMap = /*#__PURE__*/function () {
   }, {
     key: "getHashHexCharacters",
     value: function () {
-      var _getHashHexCharacters = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee2() {
+      var _getHashHexCharacters = (0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee2() {
         var meta;
-        return _regenerator["default"].wrap(function _callee2$(_context2) {
+        return _regenerator.default.wrap(function _callee2$(_context2) {
           while (1) {
             switch (_context2.prev = _context2.next) {
               case 0:
@@ -104,9 +104,9 @@ var HttpMap = /*#__PURE__*/function () {
   }, {
     key: "getCompress",
     value: function () {
-      var _getCompress = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee3() {
+      var _getCompress = (0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee3() {
         var meta;
-        return _regenerator["default"].wrap(function _callee3$(_context3) {
+        return _regenerator.default.wrap(function _callee3$(_context3) {
           while (1) {
             switch (_context3.prev = _context3.next) {
               case 0:
@@ -134,9 +134,9 @@ var HttpMap = /*#__PURE__*/function () {
   }, {
     key: "getTrackNames",
     value: function () {
-      var _getTrackNames = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee4() {
+      var _getTrackNames = (0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee4() {
         var meta;
-        return _regenerator["default"].wrap(function _callee4$(_context4) {
+        return _regenerator.default.wrap(function _callee4$(_context4) {
           while (1) {
             switch (_context4.prev = _context4.next) {
               case 0:
@@ -169,9 +169,9 @@ var HttpMap = /*#__PURE__*/function () {
   }, {
     key: "get",
     value: function () {
-      var _get = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee5(key) {
+      var _get = (0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee5(key) {
         var bucket;
-        return _regenerator["default"].wrap(function _callee5$(_context5) {
+        return _regenerator.default.wrap(function _callee5$(_context5) {
           while (1) {
             switch (_context5.prev = _context5.next) {
               case 0:
@@ -204,9 +204,9 @@ var HttpMap = /*#__PURE__*/function () {
   }, {
     key: "getBucket",
     value: function () {
-      var _getBucket = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee6(key) {
+      var _getBucket = (0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee6(key) {
         var bucketIdent, hexToDirPath;
-        return _regenerator["default"].wrap(function _callee6$(_context6) {
+        return _regenerator.default.wrap(function _callee6$(_context6) {
           while (1) {
             switch (_context6.prev = _context6.next) {
               case 0:
@@ -241,9 +241,9 @@ var HttpMap = /*#__PURE__*/function () {
   }, {
     key: "loadFile",
     value: function () {
-      var _loadFile = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee7(id) {
+      var _loadFile = (0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee7(id) {
         var response;
-        return _regenerator["default"].wrap(function _callee7$(_context7) {
+        return _regenerator.default.wrap(function _callee7$(_context7) {
           while (1) {
             switch (_context7.prev = _context7.next) {
               case 0:
@@ -285,9 +285,9 @@ var HttpMap = /*#__PURE__*/function () {
   }, {
     key: "hexToDirPath",
     value: function () {
-      var _hexToDirPath = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee8(hex) {
+      var _hexToDirPath = (0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee8(hex) {
         var hashHexCharacters, compress, dirpath, i;
-        return _regenerator["default"].wrap(function _callee8$(_context8) {
+        return _regenerator.default.wrap(function _callee8$(_context8) {
           while (1) {
             switch (_context8.prev = _context8.next) {
               case 0:
@@ -341,10 +341,10 @@ var HttpMap = /*#__PURE__*/function () {
   }, {
     key: "hash",
     value: function hash(data) {
-      return (0, _bufferCrc["default"])(Buffer.from(data)).toString('hex').toLowerCase().replace('-', 'n');
+      return (0, _bufferCrc.default)(Buffer.from(data)).toString('hex').toLowerCase().replace('-', 'n');
     }
   }]);
   return HttpMap;
 }();
 
-exports["default"] = HttpMap;
+exports.default = HttpMap;

package/dist/JBrowse1TextSeachAdapter/HttpMap.test.js

@@ -17,9 +17,9 @@ var _f = _interopRequireDefault(require("../../test_data/names/f.json"));
 var _HttpMap = _interopRequireDefault(require("./HttpMap"));
 
 describe('test JBrowse1 hash implementation', function () {
-  test('read from meta', /*#__PURE__*/(0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee() {
+  test('read from meta', /*#__PURE__*/(0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee() {
     var mockFetch, rootTemplate, spy, hashMap;
-    return _regenerator["default"].wrap(function _callee$(_context) {
+    return _regenerator.default.wrap(function _callee$(_context) {
       while (1) {
         switch (_context.prev = _context.next) {
           case 0:
@@ -27,17 +27,17 @@ describe('test JBrowse1 hash implementation', function () {
               var response = {};
 
               if (url.includes('names/meta.json')) {
-                response = _meta["default"];
+                response = _meta.default;
               }
 
               return Promise.resolve(new Response(JSON.stringify(response)));
             };
 
-            rootTemplate = _path["default"].join(__dirname, '..', '..', '..', '..', 'test_data', 'names').replace(/\\/g, '\\\\');
+            rootTemplate = _path.default.join(__dirname, '..', '..', '..', '..', 'test_data', 'names').replace(/\\/g, '\\\\');
             spy = jest.spyOn(global, 'fetch'); // eslint-disable-next-line @typescript-eslint/no-explicit-any
 
             spy.mockImplementation(mockFetch);
-            hashMap = new _HttpMap["default"]({
+            hashMap = new _HttpMap.default({
               url: rootTemplate
             });
             _context.next = 7;
@@ -66,9 +66,9 @@ describe('test JBrowse1 hash implementation', function () {
       }
     }, _callee);
   })));
-  test('get bucket contents', /*#__PURE__*/(0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee2() {
+  test('get bucket contents', /*#__PURE__*/(0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee2() {
     var mockFetch, rootTemplate, spy, hashMap;
-    return _regenerator["default"].wrap(function _callee2$(_context2) {
+    return _regenerator.default.wrap(function _callee2$(_context2) {
       while (1) {
         switch (_context2.prev = _context2.next) {
           case 0:
@@ -76,25 +76,25 @@ describe('test JBrowse1 hash implementation', function () {
               var response = {};
 
               if (url.includes('names/meta.json')) {
-                response = _meta["default"];
+                response = _meta.default;
               }
 
               if (url.includes('names/0.json')) {
-                response = _["default"];
+                response = _.default;
               }
 
               if (url.includes('names/f.json')) {
-                response = _f["default"];
+                response = _f.default;
               }
 
               return Promise.resolve(new Response(JSON.stringify(response)));
             };
 
-            rootTemplate = _path["default"].join(__dirname, '..', '..', '..', '..', 'test_data', 'names').replace(/\\/g, '\\\\');
+            rootTemplate = _path.default.join(__dirname, '..', '..', '..', '..', 'test_data', 'names').replace(/\\/g, '\\\\');
             spy = jest.spyOn(global, 'fetch'); // eslint-disable-next-line @typescript-eslint/no-explicit-any
 
             spy.mockImplementation(mockFetch);
-            hashMap = new _HttpMap["default"]({
+            hashMap = new _HttpMap.default({
               url: rootTemplate
             });
             _context2.next = 7;

package/dist/JBrowse1TextSeachAdapter/JBrowse1TextSearchAdapter.d.ts

@@ -1,33 +1,33 @@
-import { BaseTextSearchAdapter, BaseArgs, BaseAdapter } from '@jbrowse/core/data_adapters/BaseAdapter';
-import BaseResult from '@jbrowse/core/TextSearch/BaseResults';
-import { Instance } from 'mobx-state-tree';
-import MyConfigSchema from './configSchema';
-import HttpMap from './HttpMap';
-import PluginManager from '@jbrowse/core/PluginManager';
-import { getSubAdapterType } from '@jbrowse/core/data_adapters/dataAdapterCache';
-export interface TooManyHits {
-    name: string;
-    hitLimit: number;
-}
-interface SearchResults {
-    prefix: ({
-        name: string;
-    } | string)[];
-    exact: [string, number, string, string, number, number][];
-}
-export declare type NamesIndexRecord = string | Array<string | number>;
-export default class JBrowse1TextSearchAdapter extends BaseAdapter implements BaseTextSearchAdapter {
-    httpMap: HttpMap;
-    tracksNames?: string[];
-    constructor(config: Instance<typeof MyConfigSchema>, getSubAdapter?: getSubAdapterType, pluginManager?: PluginManager);
-    /**
-     * Returns the contents of the file containing the query if it exists
-     * else it returns empty
-     * @param query - string query
-     */
-    loadIndexFile(query: string): Promise<Record<string, SearchResults>>;
-    searchIndex(args: BaseArgs): Promise<BaseResult[]>;
-    formatResults(results: SearchResults, tracks: string[], searchType?: string): BaseResult[];
-    freeResources(): void;
-}
-export {};
+import { BaseTextSearchAdapter, BaseArgs, BaseAdapter } from '@jbrowse/core/data_adapters/BaseAdapter';
+import BaseResult from '@jbrowse/core/TextSearch/BaseResults';
+import { Instance } from 'mobx-state-tree';
+import MyConfigSchema from './configSchema';
+import HttpMap from './HttpMap';
+import PluginManager from '@jbrowse/core/PluginManager';
+import { getSubAdapterType } from '@jbrowse/core/data_adapters/dataAdapterCache';
+export interface TooManyHits {
+    name: string;
+    hitLimit: number;
+}
+interface SearchResults {
+    prefix: ({
+        name: string;
+    } | string)[];
+    exact: [string, number, string, string, number, number][];
+}
+export declare type NamesIndexRecord = string | Array<string | number>;
+export default class JBrowse1TextSearchAdapter extends BaseAdapter implements BaseTextSearchAdapter {
+    httpMap: HttpMap;
+    tracksNames?: string[];
+    constructor(config: Instance<typeof MyConfigSchema>, getSubAdapter?: getSubAdapterType, pluginManager?: PluginManager);
+    /**
+     * Returns the contents of the file containing the query if it exists
+     * else it returns empty
+     * @param query - string query
+     */
+    loadIndexFile(query: string): Promise<Record<string, SearchResults>>;
+    searchIndex(args: BaseArgs): Promise<BaseResult[]>;
+    formatResults(results: SearchResults, tracks: string[], searchType?: string): BaseResult[];
+    freeResources(): void;
+}
+export {};

package/dist/JBrowse1TextSeachAdapter/JBrowse1TextSearchAdapter.js

@@ -5,7 +5,7 @@ var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefau
 Object.defineProperty(exports, "__esModule", {
   value: true
 });
-exports["default"] = void 0;
+exports.default = void 0;
 
 var _regenerator = _interopRequireDefault(require("@babel/runtime/regenerator"));
 
@@ -37,31 +37,31 @@ var _configuration = require("@jbrowse/core/configuration");
 
 var _HttpMap = _interopRequireDefault(require("./HttpMap"));
 
-function _createSuper(Derived) { var hasNativeReflectConstruct = _isNativeReflectConstruct(); return function _createSuperInternal() { var Super = (0, _getPrototypeOf2["default"])(Derived), result; if (hasNativeReflectConstruct) { var NewTarget = (0, _getPrototypeOf2["default"])(this).constructor; result = Reflect.construct(Super, arguments, NewTarget); } else { result = Super.apply(this, arguments); } return (0, _possibleConstructorReturn2["default"])(this, result); }; }
+function _createSuper(Derived) { var hasNativeReflectConstruct = _isNativeReflectConstruct(); return function _createSuperInternal() { var Super = (0, _getPrototypeOf2.default)(Derived), result; if (hasNativeReflectConstruct) { var NewTarget = (0, _getPrototypeOf2.default)(this).constructor; result = Reflect.construct(Super, arguments, NewTarget); } else { result = Super.apply(this, arguments); } return (0, _possibleConstructorReturn2.default)(this, result); }; }
 
 function _isNativeReflectConstruct() { if (typeof Reflect === "undefined" || !Reflect.construct) return false; if (Reflect.construct.sham) return false; if (typeof Proxy === "function") return true; try { Boolean.prototype.valueOf.call(Reflect.construct(Boolean, [], function () {})); return true; } catch (e) { return false; } }
 
 //  Jbrowse1 text search adapter
 // Uses index built by generate-names.pl
 var JBrowse1TextSearchAdapter = /*#__PURE__*/function (_BaseAdapter) {
-  (0, _inherits2["default"])(JBrowse1TextSearchAdapter, _BaseAdapter);
+  (0, _inherits2.default)(JBrowse1TextSearchAdapter, _BaseAdapter);
 
   var _super = _createSuper(JBrowse1TextSearchAdapter);
 
   function JBrowse1TextSearchAdapter(config, getSubAdapter, pluginManager) {
     var _this;
 
-    (0, _classCallCheck2["default"])(this, JBrowse1TextSearchAdapter);
+    (0, _classCallCheck2.default)(this, JBrowse1TextSearchAdapter);
     _this = _super.call(this, config, getSubAdapter, pluginManager);
-    (0, _defineProperty2["default"])((0, _assertThisInitialized2["default"])(_this), "httpMap", void 0);
-    (0, _defineProperty2["default"])((0, _assertThisInitialized2["default"])(_this), "tracksNames", void 0);
+    (0, _defineProperty2.default)((0, _assertThisInitialized2.default)(_this), "httpMap", void 0);
+    (0, _defineProperty2.default)((0, _assertThisInitialized2.default)(_this), "tracksNames", void 0);
     var namesIndexLocation = (0, _configuration.readConfObject)(config, 'namesIndexLocation');
 
     if (!namesIndexLocation) {
       throw new Error('must provide namesIndexLocation');
     }
 
-    _this.httpMap = new _HttpMap["default"]({
+    _this.httpMap = new _HttpMap.default({
       url: namesIndexLocation.baseUri ? new URL(namesIndexLocation.uri, namesIndexLocation.baseUri).href : namesIndexLocation.uri
     });
     return _this;
@@ -73,11 +73,11 @@ var JBrowse1TextSearchAdapter = /*#__PURE__*/function (_BaseAdapter) {
    */
 
 
-  (0, _createClass2["default"])(JBrowse1TextSearchAdapter, [{
+  (0, _createClass2.default)(JBrowse1TextSearchAdapter, [{
     key: "loadIndexFile",
     value: function () {
-      var _loadIndexFile = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee(query) {
-        return _regenerator["default"].wrap(function _callee$(_context) {
+      var _loadIndexFile = (0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee(query) {
+        return _regenerator.default.wrap(function _callee$(_context) {
           while (1) {
             switch (_context.prev = _context.next) {
               case 0:
@@ -100,9 +100,9 @@ var JBrowse1TextSearchAdapter = /*#__PURE__*/function (_BaseAdapter) {
   }, {
     key: "searchIndex",
     value: function () {
-      var _searchIndex = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee2(args) {
+      var _searchIndex = (0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee2(args) {
         var searchType, queryString, tracks, entries;
-        return _regenerator["default"].wrap(function _callee2$(_context2) {
+        return _regenerator.default.wrap(function _callee2$(_context2) {
           while (1) {
             switch (_context2.prev = _context2.next) {
               case 0:
@@ -155,22 +155,22 @@ var JBrowse1TextSearchAdapter = /*#__PURE__*/function (_BaseAdapter) {
   }, {
     key: "formatResults",
     value: function formatResults(results, tracks, searchType) {
-      return [].concat((0, _toConsumableArray2["default"])(searchType === 'exact' ? [] : results.prefix.map(function (result) {
-        return new _BaseResults["default"]({
-          label: (0, _typeof2["default"])(result) === 'object' ? result.name : result,
+      return [].concat((0, _toConsumableArray2.default)(searchType === 'exact' ? [] : results.prefix.map(function (result) {
+        return new _BaseResults.default({
+          label: (0, _typeof2.default)(result) === 'object' ? result.name : result,
           matchedAttribute: 'name',
           matchedObject: {
             result: result
           }
         });
-      })), (0, _toConsumableArray2["default"])(results.exact.map(function (result) {
+      })), (0, _toConsumableArray2.default)(results.exact.map(function (result) {
         var name = result[0];
         var trackIndex = result[1];
         var refName = result[3];
         var start = result[4];
         var end = result[5];
         var locstring = "".concat(refName || name, ":").concat(start, "-").concat(end);
-        return new _BaseResults["default"]({
+        return new _BaseResults.default({
           locString: locstring,
           label: name,
           matchedAttribute: 'name',
@@ -188,4 +188,4 @@ var JBrowse1TextSearchAdapter = /*#__PURE__*/function (_BaseAdapter) {
   return JBrowse1TextSearchAdapter;
 }(_BaseAdapter2.BaseAdapter);
 
-exports["default"] = JBrowse1TextSearchAdapter;
+exports.default = JBrowse1TextSearchAdapter;

package/dist/JBrowse1TextSeachAdapter/JBrowse1TextSearchAdapter.test.js

@@ -20,9 +20,9 @@ var _JBrowse1TextSearchAdapter = _interopRequireDefault(require("./JBrowse1TextS
 
 var _configSchema = _interopRequireDefault(require("./configSchema"));
 
-test('adapter can fetch files from names index', /*#__PURE__*/(0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee() {
+test('adapter can fetch files from names index', /*#__PURE__*/(0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee() {
   var mockFetch, rootTemplate, spy, urlPath, args, adapter, results, results2, test2;
-  return _regenerator["default"].wrap(function _callee$(_context) {
+  return _regenerator.default.wrap(function _callee$(_context) {
     while (1) {
       switch (_context.prev = _context.next) {
         case 0:
@@ -30,21 +30,21 @@ test('adapter can fetch files from names index', /*#__PURE__*/(0, _asyncToGenera
             var response = {};
 
             if (url.includes('names/meta.json')) {
-              response = _meta["default"];
+              response = _meta.default;
             }
 
             if (url.includes('names/0.json')) {
-              response = _["default"];
+              response = _.default;
             }
 
             if (url.includes('names/f.json')) {
-              response = _f["default"];
+              response = _f.default;
             }
 
             return Promise.resolve(new Response(JSON.stringify(response)));
           };
 
-          rootTemplate = _path["default"].join(__dirname, '..', '..', '..', '..', 'test_data', 'names').replace(/\\/g, '\\\\');
+          rootTemplate = _path.default.join(__dirname, '..', '..', '..', '..', 'test_data', 'names').replace(/\\/g, '\\\\');
           spy = jest.spyOn(global, 'fetch'); // eslint-disable-next-line @typescript-eslint/no-explicit-any
 
           spy.mockImplementation(mockFetch);
@@ -58,7 +58,7 @@ test('adapter can fetch files from names index', /*#__PURE__*/(0, _asyncToGenera
             }
           }; // create adapter
 
-          adapter = new _JBrowse1TextSearchAdapter["default"](_configSchema["default"].create(args)); // prefix search
+          adapter = new _JBrowse1TextSearchAdapter.default(_configSchema.default.create(args)); // prefix search
 
           _context.next = 9;
           return adapter.searchIndex({
@@ -69,7 +69,7 @@ test('adapter can fetch files from names index', /*#__PURE__*/(0, _asyncToGenera
         case 9:
           results = _context.sent;
           // check results are of type BaseResult for prefix search
-          expect(results[0] instanceof _BaseResults["default"]).toBeTruthy();
+          expect(results[0] instanceof _BaseResults.default).toBeTruthy();
           expect(results[0].getLabel()).toEqual('Apple1');
           expect(results[1].getLabel()).toEqual('Apple2');
           expect(results[2].getLabel()).toEqual('Apple3'); // exact search
@@ -85,7 +85,7 @@ test('adapter can fetch files from names index', /*#__PURE__*/(0, _asyncToGenera
           // check results are of type location for exact search
           expect(results2.length).toEqual(5);
           test2 = results2[0];
-          expect(test2 instanceof _BaseResults["default"]).toBeTruthy();
+          expect(test2 instanceof _BaseResults.default).toBeTruthy();
           expect(test2.getLabel()).toEqual('Apple3');
           expect(test2.getLocation()).toEqual('ctgA:17399-23000');
 

package/dist/JBrowse1TextSeachAdapter/configSchema.d.ts

@@ -1,2 +1,2 @@
-declare const _default: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
-export default _default;
+declare const _default: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
+export default _default;

package/dist/JBrowse1TextSeachAdapter/configSchema.js

@@ -3,7 +3,7 @@
 Object.defineProperty(exports, "__esModule", {
   value: true
 });
-exports["default"] = void 0;
+exports.default = void 0;
 
 var _configuration = require("@jbrowse/core/configuration");
 
@@ -32,4 +32,4 @@ var _default = (0, _configuration.ConfigurationSchema)('JBrowse1TextSearchAdapte
   explicitIdentifier: 'textSearchAdapterId'
 });
 
-exports["default"] = _default;
+exports.default = _default;

package/dist/JBrowse1TextSeachAdapter/index.d.ts

@@ -1,2 +1,2 @@
-export { default as AdapterClass } from './JBrowse1TextSearchAdapter';
-export { default as configSchema } from './configSchema';
+export { default as AdapterClass } from './JBrowse1TextSearchAdapter';
+export { default as configSchema } from './configSchema';