@jbrowse/plugin-data-management 2.5.0 → 2.6.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/AddConnectionWidget/components/AddConnectionWidget.d.ts +2 -1
- package/dist/AddConnectionWidget/components/ConfigureConnection.d.ts +2 -1
- package/dist/AddConnectionWidget/components/ConnectionTypeSelect.d.ts +2 -1
- package/dist/AddTrackWidget/components/AddTrackWidget.d.ts +2 -1
- package/dist/AddTrackWidget/components/ConfirmTrack.d.ts +2 -1
- package/dist/AddTrackWidget/components/DefaultAddTrackWorkflow.d.ts +2 -1
- package/dist/AddTrackWidget/components/DefaultAddTrackWorkflow.js +1 -1
- package/dist/AddTrackWidget/components/DefaultAddTrackWorkflow.js.map +1 -1
- package/dist/AddTrackWidget/components/PasteConfigWorkflow.d.ts +2 -1
- package/dist/AddTrackWidget/components/PasteConfigWorkflow.js +1 -0
- package/dist/AddTrackWidget/components/PasteConfigWorkflow.js.map +1 -1
- package/dist/AddTrackWidget/components/TextIndexingConfig.d.ts +2 -1
- package/dist/AddTrackWidget/components/TrackAdapterSelector.d.ts +2 -1
- package/dist/AddTrackWidget/components/TrackSourceSelect.d.ts +2 -1
- package/dist/AddTrackWidget/components/TrackTypeSelector.d.ts +2 -1
- package/dist/AssemblyManager/AssemblyAddForm.d.ts +2 -1
- package/dist/AssemblyManager/AssemblyEditor.d.ts +2 -1
- package/dist/AssemblyManager/AssemblyManager.d.ts +2 -1
- package/dist/AssemblyManager/AssemblyTable.d.ts +2 -1
- package/dist/HierarchicalTrackSelectorWidget/components/HierarchicalFab.d.ts +2 -1
- package/dist/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.d.ts +2 -1
- package/dist/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.js +4 -9
- package/dist/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.js.map +1 -1
- package/dist/HierarchicalTrackSelectorWidget/components/ShoppingCart.d.ts +2 -1
- package/dist/HierarchicalTrackSelectorWidget/components/dialogs/CloseConnectionDialog.d.ts +8 -8
- package/dist/HierarchicalTrackSelectorWidget/components/dialogs/CloseConnectionDialog.js +6 -10
- package/dist/HierarchicalTrackSelectorWidget/components/dialogs/CloseConnectionDialog.js.map +1 -1
- package/dist/HierarchicalTrackSelectorWidget/components/dialogs/DeleteConnectionDialog.d.ts +2 -1
- package/dist/HierarchicalTrackSelectorWidget/components/dialogs/ManageConnectionsDialog.d.ts +2 -1
- package/dist/HierarchicalTrackSelectorWidget/components/dialogs/ToggleConnectionsDialog.d.ts +3 -3
- package/dist/HierarchicalTrackSelectorWidget/components/dialogs/ToggleConnectionsDialog.js +27 -22
- package/dist/HierarchicalTrackSelectorWidget/components/dialogs/ToggleConnectionsDialog.js.map +1 -1
- package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetFilters.d.ts +2 -1
- package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetedDialog.d.ts +2 -1
- package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetedHeader.d.ts +2 -1
- package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetedSelector.d.ts +2 -1
- package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetedSelector.js +32 -31
- package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetedSelector.js.map +1 -1
- package/dist/HierarchicalTrackSelectorWidget/components/tree/HamburgerMenu.d.ts +3 -3
- package/dist/HierarchicalTrackSelectorWidget/components/tree/HamburgerMenu.js +36 -41
- package/dist/HierarchicalTrackSelectorWidget/components/tree/HamburgerMenu.js.map +1 -1
- package/dist/HierarchicalTrackSelectorWidget/components/tree/HierarchicalHeader.d.ts +3 -3
- package/dist/HierarchicalTrackSelectorWidget/components/tree/HierarchicalHeader.js +2 -2
- package/dist/HierarchicalTrackSelectorWidget/components/tree/HierarchicalHeader.js.map +1 -1
- package/dist/HierarchicalTrackSelectorWidget/components/tree/HierarchicalTree.d.ts +2 -1
- package/dist/HierarchicalTrackSelectorWidget/components/tree/TrackCategory.d.ts +2 -1
- package/dist/HierarchicalTrackSelectorWidget/components/tree/TrackLabel.d.ts +2 -1
- package/dist/HierarchicalTrackSelectorWidget/components/tree/TrackListNode.d.ts +2 -1
- package/dist/HierarchicalTrackSelectorWidget/model.d.ts +69 -5
- package/dist/HierarchicalTrackSelectorWidget/model.js +100 -53
- package/dist/HierarchicalTrackSelectorWidget/model.js.map +1 -1
- package/dist/PluginStoreWidget/components/CustomPluginForm.d.ts +2 -1
- package/dist/PluginStoreWidget/components/InstalledPlugin.d.ts +2 -1
- package/dist/PluginStoreWidget/components/InstalledPluginsList.d.ts +2 -1
- package/dist/PluginStoreWidget/components/PluginCard.d.ts +2 -1
- package/dist/PluginStoreWidget/components/PluginStoreWidget.d.ts +2 -1
- package/dist/SetDefaultSession/SetDefaultSession.d.ts +2 -1
- package/dist/index.d.ts +4 -4
- package/dist/ucsc-trackhub/model.d.ts +12 -0
- package/dist/ucsc-trackhub/model.js +45 -12
- package/dist/ucsc-trackhub/model.js.map +1 -1
- package/esm/AddConnectionWidget/components/AddConnectionWidget.d.ts +2 -1
- package/esm/AddConnectionWidget/components/ConfigureConnection.d.ts +2 -1
- package/esm/AddConnectionWidget/components/ConnectionTypeSelect.d.ts +2 -1
- package/esm/AddTrackWidget/components/AddTrackWidget.d.ts +2 -1
- package/esm/AddTrackWidget/components/ConfirmTrack.d.ts +2 -1
- package/esm/AddTrackWidget/components/DefaultAddTrackWorkflow.d.ts +2 -1
- package/esm/AddTrackWidget/components/DefaultAddTrackWorkflow.js +1 -1
- package/esm/AddTrackWidget/components/DefaultAddTrackWorkflow.js.map +1 -1
- package/esm/AddTrackWidget/components/PasteConfigWorkflow.d.ts +2 -1
- package/esm/AddTrackWidget/components/PasteConfigWorkflow.js +1 -0
- package/esm/AddTrackWidget/components/PasteConfigWorkflow.js.map +1 -1
- package/esm/AddTrackWidget/components/TextIndexingConfig.d.ts +2 -1
- package/esm/AddTrackWidget/components/TrackAdapterSelector.d.ts +2 -1
- package/esm/AddTrackWidget/components/TrackSourceSelect.d.ts +2 -1
- package/esm/AddTrackWidget/components/TrackTypeSelector.d.ts +2 -1
- package/esm/AssemblyManager/AssemblyAddForm.d.ts +2 -1
- package/esm/AssemblyManager/AssemblyEditor.d.ts +2 -1
- package/esm/AssemblyManager/AssemblyManager.d.ts +2 -1
- package/esm/AssemblyManager/AssemblyTable.d.ts +2 -1
- package/esm/HierarchicalTrackSelectorWidget/components/HierarchicalFab.d.ts +2 -1
- package/esm/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.d.ts +2 -1
- package/esm/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.js +4 -9
- package/esm/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.js.map +1 -1
- package/esm/HierarchicalTrackSelectorWidget/components/ShoppingCart.d.ts +2 -1
- package/esm/HierarchicalTrackSelectorWidget/components/dialogs/CloseConnectionDialog.d.ts +8 -8
- package/esm/HierarchicalTrackSelectorWidget/components/dialogs/CloseConnectionDialog.js +7 -11
- package/esm/HierarchicalTrackSelectorWidget/components/dialogs/CloseConnectionDialog.js.map +1 -1
- package/esm/HierarchicalTrackSelectorWidget/components/dialogs/DeleteConnectionDialog.d.ts +2 -1
- package/esm/HierarchicalTrackSelectorWidget/components/dialogs/ManageConnectionsDialog.d.ts +2 -1
- package/esm/HierarchicalTrackSelectorWidget/components/dialogs/ToggleConnectionsDialog.d.ts +3 -3
- package/esm/HierarchicalTrackSelectorWidget/components/dialogs/ToggleConnectionsDialog.js +27 -22
- package/esm/HierarchicalTrackSelectorWidget/components/dialogs/ToggleConnectionsDialog.js.map +1 -1
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetFilters.d.ts +2 -1
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetedDialog.d.ts +2 -1
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetedHeader.d.ts +2 -1
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetedSelector.d.ts +2 -1
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetedSelector.js +32 -31
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetedSelector.js.map +1 -1
- package/esm/HierarchicalTrackSelectorWidget/components/tree/HamburgerMenu.d.ts +3 -3
- package/esm/HierarchicalTrackSelectorWidget/components/tree/HamburgerMenu.js +37 -42
- package/esm/HierarchicalTrackSelectorWidget/components/tree/HamburgerMenu.js.map +1 -1
- package/esm/HierarchicalTrackSelectorWidget/components/tree/HierarchicalHeader.d.ts +3 -3
- package/esm/HierarchicalTrackSelectorWidget/components/tree/HierarchicalHeader.js +2 -2
- package/esm/HierarchicalTrackSelectorWidget/components/tree/HierarchicalHeader.js.map +1 -1
- package/esm/HierarchicalTrackSelectorWidget/components/tree/HierarchicalTree.d.ts +2 -1
- package/esm/HierarchicalTrackSelectorWidget/components/tree/TrackCategory.d.ts +2 -1
- package/esm/HierarchicalTrackSelectorWidget/components/tree/TrackLabel.d.ts +2 -1
- package/esm/HierarchicalTrackSelectorWidget/components/tree/TrackListNode.d.ts +2 -1
- package/esm/HierarchicalTrackSelectorWidget/model.d.ts +69 -5
- package/esm/HierarchicalTrackSelectorWidget/model.js +101 -54
- package/esm/HierarchicalTrackSelectorWidget/model.js.map +1 -1
- package/esm/PluginStoreWidget/components/CustomPluginForm.d.ts +2 -1
- package/esm/PluginStoreWidget/components/InstalledPlugin.d.ts +2 -1
- package/esm/PluginStoreWidget/components/InstalledPluginsList.d.ts +2 -1
- package/esm/PluginStoreWidget/components/PluginCard.d.ts +2 -1
- package/esm/PluginStoreWidget/components/PluginStoreWidget.d.ts +2 -1
- package/esm/SetDefaultSession/SetDefaultSession.d.ts +2 -1
- package/esm/index.d.ts +4 -4
- package/esm/ucsc-trackhub/model.d.ts +12 -0
- package/esm/ucsc-trackhub/model.js +20 -10
- package/esm/ucsc-trackhub/model.js.map +1 -1
- package/package.json +2 -2
- package/src/AddConnectionWidget/components/AddConnectionWidget.test.tsx +1 -1
- package/src/AddTrackWidget/components/DefaultAddTrackWorkflow.tsx +1 -1
- package/src/AddTrackWidget/components/PasteConfigWorkflow.tsx +1 -0
- package/src/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.tsx +11 -21
- package/src/HierarchicalTrackSelectorWidget/components/__snapshots__/HierarchicalTrackSelector.test.tsx.snap +89 -24
- package/src/HierarchicalTrackSelectorWidget/components/dialogs/CloseConnectionDialog.tsx +9 -13
- package/src/HierarchicalTrackSelectorWidget/components/dialogs/ToggleConnectionsDialog.tsx +69 -39
- package/src/HierarchicalTrackSelectorWidget/components/faceted/FacetedSelector.tsx +14 -18
- package/src/HierarchicalTrackSelectorWidget/components/tree/HamburgerMenu.tsx +46 -51
- package/src/HierarchicalTrackSelectorWidget/components/tree/HierarchicalHeader.tsx +1 -3
- package/src/HierarchicalTrackSelectorWidget/model.ts +120 -65
- package/src/PluginStoreWidget/model.test.tsx +1 -1
- package/src/ucsc-trackhub/model.ts +28 -24
|
@@ -1,3 +1,4 @@
|
|
|
1
|
+
import React from 'react';
|
|
1
2
|
import { ConnectionType } from '@jbrowse/core/pluggableElementTypes';
|
|
2
3
|
import { AnyConfigurationModel } from '@jbrowse/core/configuration';
|
|
3
4
|
import { AbstractSessionModel } from '@jbrowse/core/util';
|
|
@@ -5,5 +6,5 @@ declare const _default: ({ connectionType, model, session, }: {
|
|
|
5
6
|
connectionType: ConnectionType;
|
|
6
7
|
model: AnyConfigurationModel;
|
|
7
8
|
session: AbstractSessionModel;
|
|
8
|
-
}) => JSX.Element;
|
|
9
|
+
}) => React.JSX.Element;
|
|
9
10
|
export default _default;
|
|
@@ -1,7 +1,8 @@
|
|
|
1
|
+
import React from 'react';
|
|
1
2
|
import { ConnectionType } from '@jbrowse/core/pluggableElementTypes';
|
|
2
3
|
declare const _default: ({ connectionTypeChoices, connectionType, setConnectionType, }: {
|
|
3
4
|
connectionTypeChoices: ConnectionType[];
|
|
4
5
|
connectionType?: ConnectionType | undefined;
|
|
5
6
|
setConnectionType: (c?: ConnectionType) => void;
|
|
6
|
-
}) => JSX.Element;
|
|
7
|
+
}) => React.JSX.Element;
|
|
7
8
|
export default _default;
|
|
@@ -79,7 +79,7 @@ function AddTrackWorkflow({ model }) {
|
|
|
79
79
|
return;
|
|
80
80
|
}
|
|
81
81
|
const trackId = [
|
|
82
|
-
`${trackName.toLowerCase().
|
|
82
|
+
`${trackName.toLowerCase().replaceAll(' ', '_')}-${Date.now()}`,
|
|
83
83
|
`${session.adminMode ? '' : '-sessionTrack'}`,
|
|
84
84
|
].join('');
|
|
85
85
|
const assemblyInstance = session.assemblyManager.get(assembly);
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"DefaultAddTrackWorkflow.js","sourceRoot":"","sources":["../../../src/AddTrackWidget/components/DefaultAddTrackWorkflow.tsx"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,+CAAuC;AACvC,4CAQsB;AACtB,uCAA0C;AAC1C,qDAAyC;AAEzC,6CAI2B;AAC3B,+DAAqD;AACrD,2CAAqC;AAErC,SAAS;AACT,kEAAyC;AACzC,4EAAmD;AAGnD,MAAM,SAAS,GAAG,IAAA,gBAAU,GAAE,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACvC,IAAI,EAAE;QACJ,SAAS,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KAC5B;IACD,OAAO,EAAE;QACP,eAAe,EAAE,KAAK,CAAC,OAAO,CAAC,UAAU,CAAC,OAAO;KAClD;IACD,MAAM,EAAE;QACN,WAAW,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KAC9B;IACD,gBAAgB,EAAE;QAChB,SAAS,EAAE,KAAK,CAAC,OAAO,CAAC,EAAE,CAAC;QAC5B,YAAY,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KAC/B;IACD,cAAc,EAAE;QACd,OAAO,EAAE,GAAG,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,UAAU,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,QAAQ;KAC/D;CACF,CAAC,CAAC,CAAA;AAEH,MAAM,KAAK,GAAG,CAAC,kBAAkB,EAAE,oBAAoB,CAAC,CAAA;AAExD,SAAS,gBAAgB,CAAC,EAAE,KAAK,EAA4B;IAC3D,MAAM,CAAC,UAAU,EAAE,aAAa,CAAC,GAAG,IAAA,gBAAQ,EAAC,CAAC,CAAC,CAAA;IAC/C,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAE/B,8DAA8D;IAC9D,MAAM,EAAE,WAAW,EAAE,GAAG,IAAA,yBAAO,EAAM,KAAK,CAAC,CAAA;IAC3C,MAAM,OAAO,GAAG,IAAA,iBAAU,EAAC,KAAK,CAAC,CAAA;IACjC,MAAM,EACJ,QAAQ,EACR,YAAY,EACZ,SAAS,EACT,SAAS,EACT,SAAS,EACT,cAAc,EACd,gBAAgB,GACjB,GAAG,KAAK,CAAA;IACT,MAAM,CAAC,iBAAiB,EAAE,oBAAoB,CAAC,GAAG,IAAA,gBAAQ,GAAU,CAAA;IAEpE,SAAS,cAAc,CAAC,IAAY;QAClC,QAAQ,IAAI,EAAE;YACZ,KAAK,CAAC;gBACJ,OAAO,8BAAC,2BAAiB,IAAC,KAAK,EAAE,KAAK,GAAI,CAAA;YAC5C,KAAK,CAAC;gBACJ,OAAO,8BAAC,sBAAY,IAAC,KAAK,EAAE,KAAK,GAAI,CAAA;YACvC;gBACE,OAAO,8BAAC,qBAAU,uBAA0B,CAAA;SAC/C;IACH,CAAC;IAED,KAAK,UAAU,UAAU;QACvB,IAAI,UAAU,KAAK,KAAK,CAAC,MAAM,GAAG,CAAC,EAAE;YACnC,aAAa,CAAC,UAAU,GAAG,CAAC,CAAC,CAAA;YAC7B,OAAM;SACP;QAED,MAAM,OAAO,GAAG;YACd,GAAG,SAAS,CAAC,WAAW,EAAE,CAAC,
|
|
1
|
+
{"version":3,"file":"DefaultAddTrackWorkflow.js","sourceRoot":"","sources":["../../../src/AddTrackWidget/components/DefaultAddTrackWorkflow.tsx"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,+CAAuC;AACvC,4CAQsB;AACtB,uCAA0C;AAC1C,qDAAyC;AAEzC,6CAI2B;AAC3B,+DAAqD;AACrD,2CAAqC;AAErC,SAAS;AACT,kEAAyC;AACzC,4EAAmD;AAGnD,MAAM,SAAS,GAAG,IAAA,gBAAU,GAAE,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACvC,IAAI,EAAE;QACJ,SAAS,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KAC5B;IACD,OAAO,EAAE;QACP,eAAe,EAAE,KAAK,CAAC,OAAO,CAAC,UAAU,CAAC,OAAO;KAClD;IACD,MAAM,EAAE;QACN,WAAW,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KAC9B;IACD,gBAAgB,EAAE;QAChB,SAAS,EAAE,KAAK,CAAC,OAAO,CAAC,EAAE,CAAC;QAC5B,YAAY,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KAC/B;IACD,cAAc,EAAE;QACd,OAAO,EAAE,GAAG,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,UAAU,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,QAAQ;KAC/D;CACF,CAAC,CAAC,CAAA;AAEH,MAAM,KAAK,GAAG,CAAC,kBAAkB,EAAE,oBAAoB,CAAC,CAAA;AAExD,SAAS,gBAAgB,CAAC,EAAE,KAAK,EAA4B;IAC3D,MAAM,CAAC,UAAU,EAAE,aAAa,CAAC,GAAG,IAAA,gBAAQ,EAAC,CAAC,CAAC,CAAA;IAC/C,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAE/B,8DAA8D;IAC9D,MAAM,EAAE,WAAW,EAAE,GAAG,IAAA,yBAAO,EAAM,KAAK,CAAC,CAAA;IAC3C,MAAM,OAAO,GAAG,IAAA,iBAAU,EAAC,KAAK,CAAC,CAAA;IACjC,MAAM,EACJ,QAAQ,EACR,YAAY,EACZ,SAAS,EACT,SAAS,EACT,SAAS,EACT,cAAc,EACd,gBAAgB,GACjB,GAAG,KAAK,CAAA;IACT,MAAM,CAAC,iBAAiB,EAAE,oBAAoB,CAAC,GAAG,IAAA,gBAAQ,GAAU,CAAA;IAEpE,SAAS,cAAc,CAAC,IAAY;QAClC,QAAQ,IAAI,EAAE;YACZ,KAAK,CAAC;gBACJ,OAAO,8BAAC,2BAAiB,IAAC,KAAK,EAAE,KAAK,GAAI,CAAA;YAC5C,KAAK,CAAC;gBACJ,OAAO,8BAAC,sBAAY,IAAC,KAAK,EAAE,KAAK,GAAI,CAAA;YACvC;gBACE,OAAO,8BAAC,qBAAU,uBAA0B,CAAA;SAC/C;IACH,CAAC;IAED,KAAK,UAAU,UAAU;QACvB,IAAI,UAAU,KAAK,KAAK,CAAC,MAAM,GAAG,CAAC,EAAE;YACnC,aAAa,CAAC,UAAU,GAAG,CAAC,CAAC,CAAA;YAC7B,OAAM;SACP;QAED,MAAM,OAAO,GAAG;YACd,GAAG,SAAS,CAAC,WAAW,EAAE,CAAC,UAAU,CAAC,GAAG,EAAE,GAAG,CAAC,IAAI,IAAI,CAAC,GAAG,EAAE,EAAE;YAC/D,GAAG,OAAO,CAAC,SAAS,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,eAAe,EAAE;SAC9C,CAAC,IAAI,CAAC,EAAE,CAAC,CAAA;QAEV,MAAM,gBAAgB,GAAG,OAAO,CAAC,eAAe,CAAC,GAAG,CAAC,QAAQ,CAAC,CAAA;QAE9D,IAAI,gBAAgB,IAAI,YAAY,IAAI,YAAY,CAAC,IAAI,KAAK,SAAS,EAAE;YACvE,OAAO,CAAC,YAAY,CAAC;gBACnB,OAAO;gBACP,IAAI,EAAE,SAAS;gBACf,IAAI,EAAE,SAAS;gBACf,aAAa,EAAE,CAAC,QAAQ,CAAC;gBACzB,OAAO,EAAE;oBACP,GAAG,YAAY;oBACf,eAAe,EAAE,IAAA,uBAAO,EAAC,gBAAgB,EAAE,CAAC,UAAU,EAAE,SAAS,CAAC,CAAC;iBACpE;aACF,CAAC,CAAA;YACF,IAAI,KAAK,CAAC,IAAI,EAAE;gBACd,KAAK,CAAC,IAAI,CAAC,SAAS,CAAC,OAAO,CAAC,CAAA;gBAC7B,IACE,iBAAU;oBACV,cAAc;oBACd,IAAA,gCAAyB,EAAC,YAAY,CAAC,IAAI,CAAC,EAC5C;oBACA,MAAM,IAAI,GAAG,gBAAgB,IAAI;wBAC/B,UAAU,EAAE,CAAC,MAAM,EAAE,IAAI,CAAC;wBAC1B,OAAO,EAAE,CAAC,KAAK,EAAE,MAAM,CAAC;qBACzB,CAAA;oBACD,MAAM,SAAS,GAAG,SAAS,GAAG,QAAQ,CAAA;oBACtC,MAAM,QAAQ,GAAG;wBACf,cAAc,EAAE;4BACd,GAAG,IAAI;4BACP,UAAU,EAAE,CAAC,QAAQ,CAAC;4BACtB,MAAM,EAAE,CAAC,OAAO,CAAC;4BACjB,SAAS,EAAE,UAAU;4BACrB,IAAI,EAAE,SAAS;4BACf,SAAS,EAAE,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE;yBACpC;wBACD,IAAI,EAAE,SAAS;wBACf,cAAc,EAAE,GAAG,EAAE,CAAC,WAAW,CAAC,QAAQ,EAAE;qBAC7C,CAAA;oBACD,WAAW,CAAC,QAAQ,CAAC,QAAQ,CAAC,CAAA;iBAC/B;aACF;iBAAM;gBACL,OAAO,CAAC,MAAM,CACZ,oFAAoF,EACpF,MAAM,CACP,CAAA;aACF;YACD,KAAK,CAAC,SAAS,EAAE,CAAA;YACjB,OAAO,CAAC,UAAU,CAAC,KAAK,CAAC,CAAA;SAC1B;aAAM;YACL,oBAAoB,CAClB,kFAAkF,CACnF,CAAA;SACF;IACH,CAAC;IAED,SAAS,UAAU;QACjB,oBAAoB,CAAC,SAAS,CAAC,CAAA;QAC/B,aAAa,CAAC,UAAU,GAAG,CAAC,CAAC,CAAA;IAC/B,CAAC;IAED,SAAS,cAAc;QACrB,QAAQ,UAAU,EAAE;YAClB,KAAK,CAAC;gBACJ,OAAO,CAAC,SAAS,CAAA;YACnB,KAAK,CAAC;gBACJ,OAAO,CAAC,CAAC,SAAS,IAAI,SAAS,KAAI,YAAY,aAAZ,YAAY,uBAAZ,YAAY,CAAE,IAAI,CAAA,IAAI,QAAQ,CAAC,CAAA;YACpE;gBACE,OAAO,IAAI,CAAA;SACd;IACH,CAAC;IAED,OAAO,CACL,uCAAK,SAAS,EAAE,OAAO,CAAC,IAAI;QAC1B,8BAAC,kBAAO,IACN,SAAS,EAAE,OAAO,CAAC,OAAO,EAC1B,UAAU,EAAE,UAAU,EACtB,WAAW,EAAC,UAAU,IAErB,KAAK,CAAC,GAAG,CAAC,CAAC,KAAK,EAAE,GAAG,EAAE,EAAE,CAAC,CACzB,8BAAC,eAAI,IAAC,GAAG,EAAE,KAAK;YACd,8BAAC,oBAAS,QAAE,KAAK,CAAa;YAC9B,8BAAC,sBAAW;gBACT,cAAc,CAAC,GAAG,CAAC;gBACpB,uCAAK,SAAS,EAAE,OAAO,CAAC,gBAAgB;oBACtC,8BAAC,iBAAM,IACL,QAAQ,EAAE,UAAU,KAAK,CAAC,EAC1B,OAAO,EAAE,UAAU,EACnB,SAAS,EAAE,OAAO,CAAC,MAAM,WAGlB;oBACT,8BAAC,iBAAM,IACL,QAAQ,EAAE,cAAc,EAAE,EAC1B,OAAO,EAAC,WAAW,EACnB,KAAK,EAAC,SAAS,EACf,OAAO,EAAE,UAAU,EACnB,SAAS,EAAE,OAAO,CAAC,MAAM,iBACb,oBAAoB,IAE/B,UAAU,KAAK,KAAK,CAAC,MAAM,GAAG,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,MAAM,CAC1C,CACL;gBACL,iBAAiB,CAAC,CAAC,CAAC,CACnB,uCAAK,SAAS,EAAE,OAAO,CAAC,cAAc;oBACpC,8BAAC,gBAAK,IAAC,QAAQ,EAAC,OAAO,IAAE,iBAAiB,CAAS,CAC/C,CACP,CAAC,CAAC,CAAC,IAAI,CACI,CACT,CACR,CAAC,CACM,CACN,CACP,CAAA;AACH,CAAC;AACD,kBAAe,IAAA,qBAAQ,EAAC,gBAAgB,CAAC,CAAA"}
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"PasteConfigWorkflow.js","sourceRoot":"","sources":["../../../src/AddTrackWidget/components/PasteConfigWorkflow.tsx"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;AAAA,+CAAuC;AACvC,4CAAiD;AACjD,yCAA+C;AAC/C,uCAA0C;AAC1C,6CAA+C;AAC/C,2CAAqC;AAKrC,MAAM,SAAS,GAAG,IAAA,gBAAU,GAAE,CAAC;IAC7B,OAAO,EAAE;QACP,KAAK,EAAE,MAAM;KACd;IACD,MAAM,EAAE;QACN,SAAS,EAAE,EAAE;QACb,YAAY,EAAE,GAAG;QACjB,OAAO,EAAE,OAAO;KACjB;CACF,CAAC,CAAA;AAEF,SAAS,gBAAgB,CAAC,EAAE,KAAK,EAA4B;IAC3D,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,MAAM,CAAC,GAAG,EAAE,MAAM,CAAC,GAAG,IAAA,gBAAQ,EAAC,EAAE,CAAC,CAAA;IAClC,MAAM,CAAC,KAAK,EAAE,QAAQ,CAAC,GAAG,IAAA,gBAAQ,GAAW,CAAA;IAE7C,OAAO,CACL;QACG,KAAK,CAAC,CAAC,CAAC,8BAAC,iBAAY,IAAC,KAAK,EAAE,KAAK,GAAI,CAAC,CAAC,CAAC,IAAI;QAC9C,8BAAC,oBAAS,IACR,SAAS,QACT,IAAI,EAAE,EAAE,EACR,KAAK,EAAE,GAAG,EACV,QAAQ,EAAE,KAAK,CAAC,EAAE,CAAC,MAAM,CAAC,KAAK,CAAC,MAAM,CAAC,KAAK,CAAC,EAC7C,WAAW,EACT,6DAA6D,EAE/D,OAAO,EAAC,UAAU,EAClB,SAAS,EAAE,OAAO,CAAC,OAAO,GAC1B;QACF,8BAAC,iBAAM,IACL,OAAO,EAAC,WAAW,EACnB,SAAS,EAAE,OAAO,CAAC,MAAM,EACzB,OAAO,EAAE,GAAG,EAAE;gBACZ,IAAI;oBACF,QAAQ,CAAC,SAAS,CAAC,CAAA;oBACnB,MAAM,OAAO,GAAG,IAAA,iBAAU,EAAC,KAAK,CAAC,CAAA;oBACjC,MAAM,IAAI,GAAG,IAAI,CAAC,KAAK,CAAC,GAAG,CAAC,CAAA;oBAC5B,MAAM,KAAK,GAAG,KAAK,CAAC,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAA;oBACjD,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,EAAE,CAAC,OAAO,CAAC,YAAY,CAAC,CAAC,CAAC,CAAC,CAAA;oBAC3C,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC,CAAA;oBAC7B,KAAK,CAAC,SAAS,EAAE,CAAA;oBACjB,OAAO,CAAC,UAAU,CAAC,KAAK,CAAC,CAAA;iBAC1B;gBAAC,OAAO,CAAC,EAAE;oBACV,QAAQ,CAAC,CAAC,CAAC,CAAA;iBACZ;YACH,CAAC,aAGM,CACL,CACP,CAAA;AACH,CAAC;AACD,kBAAe,IAAA,qBAAQ,EAAC,gBAAgB,CAAC,CAAA"}
|
|
1
|
+
{"version":3,"file":"PasteConfigWorkflow.js","sourceRoot":"","sources":["../../../src/AddTrackWidget/components/PasteConfigWorkflow.tsx"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;AAAA,+CAAuC;AACvC,4CAAiD;AACjD,yCAA+C;AAC/C,uCAA0C;AAC1C,6CAA+C;AAC/C,2CAAqC;AAKrC,MAAM,SAAS,GAAG,IAAA,gBAAU,GAAE,CAAC;IAC7B,OAAO,EAAE;QACP,KAAK,EAAE,MAAM;KACd;IACD,MAAM,EAAE;QACN,SAAS,EAAE,EAAE;QACb,YAAY,EAAE,GAAG;QACjB,OAAO,EAAE,OAAO;KACjB;CACF,CAAC,CAAA;AAEF,SAAS,gBAAgB,CAAC,EAAE,KAAK,EAA4B;IAC3D,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,MAAM,CAAC,GAAG,EAAE,MAAM,CAAC,GAAG,IAAA,gBAAQ,EAAC,EAAE,CAAC,CAAA;IAClC,MAAM,CAAC,KAAK,EAAE,QAAQ,CAAC,GAAG,IAAA,gBAAQ,GAAW,CAAA;IAE7C,OAAO,CACL;QACG,KAAK,CAAC,CAAC,CAAC,8BAAC,iBAAY,IAAC,KAAK,EAAE,KAAK,GAAI,CAAC,CAAC,CAAC,IAAI;QAC9C,8BAAC,oBAAS,IACR,SAAS,QACT,IAAI,EAAE,EAAE,EACR,KAAK,EAAE,GAAG,EACV,QAAQ,EAAE,KAAK,CAAC,EAAE,CAAC,MAAM,CAAC,KAAK,CAAC,MAAM,CAAC,KAAK,CAAC,EAC7C,WAAW,EACT,6DAA6D,EAE/D,OAAO,EAAC,UAAU,EAClB,SAAS,EAAE,OAAO,CAAC,OAAO,GAC1B;QACF,8BAAC,iBAAM,IACL,OAAO,EAAC,WAAW,EACnB,SAAS,EAAE,OAAO,CAAC,MAAM,EACzB,OAAO,EAAE,GAAG,EAAE;gBACZ,IAAI;oBACF,QAAQ,CAAC,SAAS,CAAC,CAAA;oBACnB,MAAM,OAAO,GAAG,IAAA,iBAAU,EAAC,KAAK,CAAC,CAAA;oBACjC,MAAM,IAAI,GAAG,IAAI,CAAC,KAAK,CAAC,GAAG,CAAC,CAAA;oBAC5B,MAAM,KAAK,GAAG,KAAK,CAAC,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAA;oBACjD,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,EAAE,CAAC,OAAO,CAAC,YAAY,CAAC,CAAC,CAAC,CAAC,CAAA;oBAC3C,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC,CAAA;oBAC7B,KAAK,CAAC,SAAS,EAAE,CAAA;oBACjB,OAAO,CAAC,UAAU,CAAC,KAAK,CAAC,CAAA;iBAC1B;gBAAC,OAAO,CAAC,EAAE;oBACV,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC,CAAA;oBAChB,QAAQ,CAAC,CAAC,CAAC,CAAA;iBACZ;YACH,CAAC,aAGM,CACL,CACP,CAAA;AACH,CAAC;AACD,kBAAe,IAAA,qBAAQ,EAAC,gBAAgB,CAAC,CAAA"}
|
|
@@ -1,6 +1,7 @@
|
|
|
1
|
+
import React from 'react';
|
|
1
2
|
import { AddTrackModel } from '../model';
|
|
2
3
|
declare function TrackSourceSelect({ model }: {
|
|
3
4
|
model: AddTrackModel;
|
|
4
|
-
}): JSX.Element;
|
|
5
|
+
}): React.JSX.Element;
|
|
5
6
|
declare const _default: typeof TrackSourceSelect;
|
|
6
7
|
export default _default;
|
|
@@ -1,3 +1,4 @@
|
|
|
1
|
+
import React from 'react';
|
|
1
2
|
import { AnyConfigurationModel } from '@jbrowse/core/configuration';
|
|
2
3
|
declare const AssemblyTable: ({ rootModel, setIsAssemblyBeingEdited, setAssemblyBeingEdited, }: {
|
|
3
4
|
rootModel: {
|
|
@@ -8,5 +9,5 @@ declare const AssemblyTable: ({ rootModel, setIsAssemblyBeingEdited, setAssembly
|
|
|
8
9
|
};
|
|
9
10
|
setIsAssemblyBeingEdited(arg: boolean): void;
|
|
10
11
|
setAssemblyBeingEdited(arg: AnyConfigurationModel): void;
|
|
11
|
-
}) => JSX.Element;
|
|
12
|
+
}) => React.JSX.Element;
|
|
12
13
|
export default AssemblyTable;
|
|
@@ -1,3 +1,4 @@
|
|
|
1
|
+
import React from 'react';
|
|
1
2
|
import { HierarchicalTrackSelectorModel } from '../model';
|
|
2
3
|
declare const HierarchicalTrackSelectorContainer: ({ model, toolbarHeight, overrideDimensions, }: {
|
|
3
4
|
model: HierarchicalTrackSelectorModel;
|
|
@@ -6,5 +7,5 @@ declare const HierarchicalTrackSelectorContainer: ({ model, toolbarHeight, overr
|
|
|
6
7
|
width: number;
|
|
7
8
|
height: number;
|
|
8
9
|
} | undefined;
|
|
9
|
-
}) => JSX.Element;
|
|
10
|
+
}) => React.JSX.Element;
|
|
10
11
|
export default HierarchicalTrackSelectorContainer;
|
|
@@ -35,9 +35,7 @@ const HierarchicalHeader_1 = __importDefault(require("./tree/HierarchicalHeader"
|
|
|
35
35
|
// Don't use autosizer in jest and instead hardcode a height, otherwise fails
|
|
36
36
|
// jest tests
|
|
37
37
|
const AutoSizedHierarchicalTree = ({ tree, model, offset, }) => {
|
|
38
|
-
return typeof jest === 'undefined' ? (react_1.default.createElement(react_virtualized_auto_sizer_1.default, { disableWidth: true }, ({ height })
|
|
39
|
-
return (react_1.default.createElement(HierarchicalTree_1.default, { height: (height || offset) - offset, model: model, tree: tree }));
|
|
40
|
-
})) : (react_1.default.createElement(HierarchicalTree_1.default, { height: 9000, model: model, tree: tree }));
|
|
38
|
+
return typeof jest === 'undefined' ? (react_1.default.createElement(react_virtualized_auto_sizer_1.default, { disableWidth: true }, args => (react_1.default.createElement(HierarchicalTree_1.default, { height: (args.height || offset) - offset, model: model, tree: tree })))) : (react_1.default.createElement(HierarchicalTree_1.default, { height: 9000, model: model, tree: tree }));
|
|
41
39
|
};
|
|
42
40
|
const Wrapper = ({ overrideDimensions, children, }) => {
|
|
43
41
|
return overrideDimensions ? (react_1.default.createElement("div", { style: { ...overrideDimensions } }, children)) : (react_1.default.createElement(react_1.default.Fragment, null, children));
|
|
@@ -48,13 +46,10 @@ const HierarchicalTrackSelectorContainer = (0, mobx_react_1.observer)(function (
|
|
|
48
46
|
react_1.default.createElement(HierarchicalFab_1.default, { model: model })));
|
|
49
47
|
});
|
|
50
48
|
const HierarchicalTrackSelector = (0, mobx_react_1.observer)(function ({ model, toolbarHeight = 0, }) {
|
|
51
|
-
const [assemblyIdx, setAssemblyIdx] = (0, react_1.useState)(0);
|
|
52
49
|
const [headerHeight, setHeaderHeight] = (0, react_1.useState)(0);
|
|
53
|
-
|
|
54
|
-
|
|
55
|
-
|
|
56
|
-
react_1.default.createElement(HierarchicalHeader_1.default, { model: model, setHeaderHeight: setHeaderHeight, setAssemblyIdx: setAssemblyIdx }),
|
|
57
|
-
react_1.default.createElement(AutoSizedHierarchicalTree, { tree: model.hierarchy(assemblyName), model: model, offset: toolbarHeight + headerHeight }))) : null;
|
|
50
|
+
return (react_1.default.createElement(react_1.default.Fragment, null,
|
|
51
|
+
react_1.default.createElement(HierarchicalHeader_1.default, { model: model, setHeaderHeight: setHeaderHeight }),
|
|
52
|
+
react_1.default.createElement(AutoSizedHierarchicalTree, { tree: model.hierarchy, model: model, offset: toolbarHeight + headerHeight })));
|
|
58
53
|
});
|
|
59
54
|
exports.default = HierarchicalTrackSelectorContainer;
|
|
60
55
|
//# sourceMappingURL=HierarchicalTrackSelector.js.map
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"HierarchicalTrackSelector.js","sourceRoot":"","sources":["../../../src/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.tsx"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,+CAAuC;AACvC,2CAAqC;AACrC,gGAAoD;AAIpD,wEAA+C;AAC/C,+EAAsD;AACtD,mFAA0D;AAE1D,6EAA6E;AAC7E,aAAa;AACb,MAAM,yBAAyB,GAAG,CAAC,EACjC,IAAI,EACJ,KAAK,EACL,MAAM,GAKP,EAAE,EAAE;IACH,OAAO,OAAO,IAAI,KAAK,WAAW,CAAC,CAAC,CAAC,CACnC,8BAAC,sCAAS,IAAC,YAAY,UACpB,CAAC,EAAE,
|
|
1
|
+
{"version":3,"file":"HierarchicalTrackSelector.js","sourceRoot":"","sources":["../../../src/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.tsx"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,+CAAuC;AACvC,2CAAqC;AACrC,gGAAoD;AAIpD,wEAA+C;AAC/C,+EAAsD;AACtD,mFAA0D;AAE1D,6EAA6E;AAC7E,aAAa;AACb,MAAM,yBAAyB,GAAG,CAAC,EACjC,IAAI,EACJ,KAAK,EACL,MAAM,GAKP,EAAE,EAAE;IACH,OAAO,OAAO,IAAI,KAAK,WAAW,CAAC,CAAC,CAAC,CACnC,8BAAC,sCAAS,IAAC,YAAY,UACpB,IAAI,CAAC,EAAE,CAAC,CACP,8BAAC,0BAAgB,IACf,MAAM,EAAE,CAAC,IAAI,CAAC,MAAM,IAAI,MAAM,CAAC,GAAG,MAAM,EACxC,KAAK,EAAE,KAAK,EACZ,IAAI,EAAE,IAAI,GACV,CACH,CACS,CACb,CAAC,CAAC,CAAC,CACF,8BAAC,0BAAgB,IAAC,MAAM,EAAE,IAAI,EAAE,KAAK,EAAE,KAAK,EAAE,IAAI,EAAE,IAAI,GAAI,CAC7D,CAAA;AACH,CAAC,CAAA;AAED,MAAM,OAAO,GAAG,CAAC,EACf,kBAAkB,EAClB,QAAQ,GAIT,EAAE,EAAE;IACH,OAAO,kBAAkB,CAAC,CAAC,CAAC,CAC1B,uCAAK,KAAK,EAAE,EAAE,GAAG,kBAAkB,EAAE,IAAG,QAAQ,CAAO,CACxD,CAAC,CAAC,CAAC,CACF,8DAAG,QAAQ,CAAI,CAChB,CAAA;AACH,CAAC,CAAA;AACD,MAAM,kCAAkC,GAAG,IAAA,qBAAQ,EAAC,UAAU,EAC5D,KAAK,EACL,aAAa,EACb,kBAAkB,GAKnB;IACC,OAAO,CACL,8BAAC,OAAO,IAAC,kBAAkB,EAAE,kBAAkB;QAC7C,8BAAC,yBAAyB,IAAC,KAAK,EAAE,KAAK,EAAE,aAAa,EAAE,aAAa,GAAI;QACzE,8BAAC,yBAAe,IAAC,KAAK,EAAE,KAAK,GAAI,CACzB,CACX,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,MAAM,yBAAyB,GAAG,IAAA,qBAAQ,EAAC,UAAU,EACnD,KAAK,EACL,aAAa,GAAG,CAAC,GAIlB;IACC,MAAM,CAAC,YAAY,EAAE,eAAe,CAAC,GAAG,IAAA,gBAAQ,EAAC,CAAC,CAAC,CAAA;IACnD,OAAO,CACL;QACE,8BAAC,4BAAkB,IAAC,KAAK,EAAE,KAAK,EAAE,eAAe,EAAE,eAAe,GAAI;QACtE,8BAAC,yBAAyB,IACxB,IAAI,EAAE,KAAK,CAAC,SAAS,EACrB,KAAK,EAAE,KAAK,EACZ,MAAM,EAAE,aAAa,GAAG,YAAY,GACpC,CACD,CACJ,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,kBAAe,kCAAkC,CAAA"}
|
|
@@ -1,12 +1,12 @@
|
|
|
1
|
-
|
|
1
|
+
import React from 'react';
|
|
2
|
+
declare const _default: ({ modalInfo, onClose, }: {
|
|
2
3
|
modalInfo?: {
|
|
3
|
-
name?: string;
|
|
4
|
+
name?: string | undefined;
|
|
4
5
|
dereferenceTypeCount?: {
|
|
5
6
|
[key: string]: number;
|
|
6
|
-
};
|
|
7
|
-
safelyBreakConnection?:
|
|
8
|
-
};
|
|
9
|
-
|
|
10
|
-
})
|
|
11
|
-
declare const _default: typeof CloseConnectionDialog;
|
|
7
|
+
} | undefined;
|
|
8
|
+
safelyBreakConnection?: (() => void) | undefined;
|
|
9
|
+
} | undefined;
|
|
10
|
+
onClose: () => void;
|
|
11
|
+
}) => React.JSX.Element;
|
|
12
12
|
export default _default;
|
|
@@ -5,27 +5,23 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
|
|
|
5
5
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
6
6
|
const react_1 = __importDefault(require("react"));
|
|
7
7
|
const material_1 = require("@mui/material");
|
|
8
|
+
const ui_1 = require("@jbrowse/core/ui");
|
|
8
9
|
const mobx_react_1 = require("mobx-react");
|
|
9
|
-
function CloseConnectionDialog({ modalInfo = {},
|
|
10
|
+
exports.default = (0, mobx_react_1.observer)(function CloseConnectionDialog({ modalInfo = {}, onClose, }) {
|
|
10
11
|
const { name, dereferenceTypeCount, safelyBreakConnection } = modalInfo;
|
|
11
|
-
return (react_1.default.createElement(
|
|
12
|
-
react_1.default.createElement(material_1.DialogTitle, null,
|
|
13
|
-
"Close connection \"",
|
|
14
|
-
name,
|
|
15
|
-
"\""),
|
|
12
|
+
return (react_1.default.createElement(ui_1.Dialog, { open: true, maxWidth: "lg", title: `Close connection "${name}"` },
|
|
16
13
|
react_1.default.createElement(material_1.DialogContent, null,
|
|
17
14
|
dereferenceTypeCount ? (react_1.default.createElement(react_1.default.Fragment, null,
|
|
18
15
|
react_1.default.createElement(material_1.DialogContentText, null, "Closing this connection will close:"),
|
|
19
16
|
react_1.default.createElement(material_1.List, null, Object.entries(dereferenceTypeCount).map(([key, value]) => (react_1.default.createElement(material_1.ListItem, { key: key }, `${value} ${key}`)))))) : null,
|
|
20
17
|
react_1.default.createElement(material_1.DialogContentText, null, "Are you sure you want to close this connection?")),
|
|
21
18
|
react_1.default.createElement(material_1.DialogActions, null,
|
|
22
|
-
react_1.default.createElement(material_1.Button, { onClick: () =>
|
|
19
|
+
react_1.default.createElement(material_1.Button, { onClick: () => onClose(), color: "primary" }, "Cancel"),
|
|
23
20
|
react_1.default.createElement(material_1.Button, { variant: "contained", onClick: modalInfo
|
|
24
21
|
? () => {
|
|
25
22
|
safelyBreakConnection === null || safelyBreakConnection === void 0 ? void 0 : safelyBreakConnection();
|
|
26
|
-
|
|
23
|
+
onClose();
|
|
27
24
|
}
|
|
28
25
|
: () => { }, color: "primary" }, "OK"))));
|
|
29
|
-
}
|
|
30
|
-
exports.default = (0, mobx_react_1.observer)(CloseConnectionDialog);
|
|
26
|
+
});
|
|
31
27
|
//# sourceMappingURL=CloseConnectionDialog.js.map
|
package/dist/HierarchicalTrackSelectorWidget/components/dialogs/CloseConnectionDialog.js.map
CHANGED
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"CloseConnectionDialog.js","sourceRoot":"","sources":["../../../../src/HierarchicalTrackSelectorWidget/components/dialogs/CloseConnectionDialog.tsx"],"names":[],"mappings":";;;;;AAAA,kDAAyB;AACzB,
|
|
1
|
+
{"version":3,"file":"CloseConnectionDialog.js","sourceRoot":"","sources":["../../../../src/HierarchicalTrackSelectorWidget/components/dialogs/CloseConnectionDialog.tsx"],"names":[],"mappings":";;;;;AAAA,kDAAyB;AACzB,4CAOsB;AACtB,yCAAyC;AACzC,2CAAqC;AAErC,kBAAe,IAAA,qBAAQ,EAAC,SAAS,qBAAqB,CAAC,EACrD,SAAS,GAAG,EAAE,EACd,OAAO,GAQR;IACC,MAAM,EAAE,IAAI,EAAE,oBAAoB,EAAE,qBAAqB,EAAE,GAAG,SAAS,CAAA;IACvE,OAAO,CACL,8BAAC,WAAM,IAAC,IAAI,QAAC,QAAQ,EAAC,IAAI,EAAC,KAAK,EAAE,qBAAqB,IAAI,GAAG;QAC5D,8BAAC,wBAAa;YACX,oBAAoB,CAAC,CAAC,CAAC,CACtB;gBACE,8BAAC,4BAAiB,8CAEE;gBACpB,8BAAC,eAAI,QACF,MAAM,CAAC,OAAO,CAAC,oBAAoB,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,GAAG,EAAE,KAAK,CAAC,EAAE,EAAE,CAAC,CAC1D,8BAAC,mBAAQ,IAAC,GAAG,EAAE,GAAG,IAAG,GAAG,KAAK,IAAI,GAAG,EAAE,CAAY,CACnD,CAAC,CACG,CACN,CACJ,CAAC,CAAC,CAAC,IAAI;YACR,8BAAC,4BAAiB,0DAEE,CACN;QAChB,8BAAC,wBAAa;YACZ,8BAAC,iBAAM,IAAC,OAAO,EAAE,GAAG,EAAE,CAAC,OAAO,EAAE,EAAE,KAAK,EAAC,SAAS,aAExC;YACT,8BAAC,iBAAM,IACL,OAAO,EAAC,WAAW,EACnB,OAAO,EACL,SAAS;oBACP,CAAC,CAAC,GAAG,EAAE;wBACH,qBAAqB,aAArB,qBAAqB,uBAArB,qBAAqB,EAAI,CAAA;wBACzB,OAAO,EAAE,CAAA;oBACX,CAAC;oBACH,CAAC,CAAC,GAAG,EAAE,GAAE,CAAC,EAEd,KAAK,EAAC,SAAS,SAGR,CACK,CACT,CACV,CAAA;AACH,CAAC,CAAC,CAAA"}
|
|
@@ -1,3 +1,4 @@
|
|
|
1
|
+
import React from 'react';
|
|
1
2
|
import { AnyConfigurationModel } from '@jbrowse/core/configuration';
|
|
2
3
|
import { AbstractSessionModel } from '@jbrowse/core/util';
|
|
3
4
|
declare function DeleteConnectionDialog({ deleteDialogDetails, session, handleClose, }: {
|
|
@@ -7,6 +8,6 @@ declare function DeleteConnectionDialog({ deleteDialogDetails, session, handleCl
|
|
|
7
8
|
};
|
|
8
9
|
session: AbstractSessionModel;
|
|
9
10
|
handleClose: () => void;
|
|
10
|
-
}): JSX.Element;
|
|
11
|
+
}): React.JSX.Element;
|
|
11
12
|
declare const _default: typeof DeleteConnectionDialog;
|
|
12
13
|
export default _default;
|
package/dist/HierarchicalTrackSelectorWidget/components/dialogs/ManageConnectionsDialog.d.ts
CHANGED
|
@@ -1,9 +1,10 @@
|
|
|
1
|
+
import React from 'react';
|
|
1
2
|
import { AnyConfigurationModel } from '@jbrowse/core/configuration';
|
|
2
3
|
import { AbstractSessionModel } from '@jbrowse/core/util';
|
|
3
4
|
declare function ManageConnectionsDlg({ session, handleClose, breakConnection, }: {
|
|
4
5
|
handleClose: () => void;
|
|
5
6
|
session: AbstractSessionModel;
|
|
6
7
|
breakConnection: (conf: AnyConfigurationModel, arg: boolean) => void;
|
|
7
|
-
}): JSX.Element;
|
|
8
|
+
}): React.JSX.Element;
|
|
8
9
|
declare const _default: typeof ManageConnectionsDlg;
|
|
9
10
|
export default _default;
|
package/dist/HierarchicalTrackSelectorWidget/components/dialogs/ToggleConnectionsDialog.d.ts
CHANGED
|
@@ -1,10 +1,10 @@
|
|
|
1
|
+
import React from 'react';
|
|
1
2
|
import { AnyConfigurationModel } from '@jbrowse/core/configuration';
|
|
2
3
|
import { AbstractSessionModel } from '@jbrowse/core/util';
|
|
3
4
|
export declare function ellipses(slug: string): string;
|
|
4
|
-
declare
|
|
5
|
+
declare const _default: ({ session, handleClose, breakConnection, }: {
|
|
5
6
|
handleClose: () => void;
|
|
6
7
|
session: AbstractSessionModel;
|
|
7
8
|
breakConnection: (arg: AnyConfigurationModel) => void;
|
|
8
|
-
})
|
|
9
|
-
declare const _default: typeof ToggleConnectionDialog;
|
|
9
|
+
}) => React.JSX.Element;
|
|
10
10
|
export default _default;
|
|
@@ -20,32 +20,37 @@ const useStyles = (0, mui_1.makeStyles)()(theme => ({
|
|
|
20
20
|
margin: theme.spacing(4),
|
|
21
21
|
},
|
|
22
22
|
}));
|
|
23
|
-
function
|
|
23
|
+
const ConnectionRow = (0, mobx_react_1.observer)(function ConnectionRow({ conf, session, breakConnection, }) {
|
|
24
|
+
const { connectionInstances: instances = [] } = session;
|
|
25
|
+
const name = (0, configuration_1.readConfObject)(conf, 'name');
|
|
26
|
+
const assemblyNames = (0, configuration_1.readConfObject)(conf, 'assemblyNames');
|
|
27
|
+
const found = instances.find(conn => name === conn.name);
|
|
28
|
+
return (react_1.default.createElement(material_1.FormControlLabel, { key: conf.connectionId, control: react_1.default.createElement(material_1.Checkbox, { checked: !!found, onChange: () => {
|
|
29
|
+
var _a;
|
|
30
|
+
if (found) {
|
|
31
|
+
breakConnection(conf);
|
|
32
|
+
}
|
|
33
|
+
else {
|
|
34
|
+
(_a = session.makeConnection) === null || _a === void 0 ? void 0 : _a.call(session, conf);
|
|
35
|
+
}
|
|
36
|
+
}, color: "primary" }), label: [
|
|
37
|
+
name,
|
|
38
|
+
assemblyNames.length ? `(${ellipses(assemblyNames.join(','))})` : '',
|
|
39
|
+
]
|
|
40
|
+
.filter(f => !!f)
|
|
41
|
+
.join(' ') }));
|
|
42
|
+
});
|
|
43
|
+
const ConnectionList = (0, mobx_react_1.observer)(function ConnectionsList({ session, breakConnection, }) {
|
|
24
44
|
const { classes } = useStyles();
|
|
25
|
-
|
|
45
|
+
return (react_1.default.createElement("div", { className: classes.connectionContainer }, !session.connections.length ? (react_1.default.createElement(material_1.Typography, null, "No connections found")) : (session.connections.map((conf, idx) => (react_1.default.createElement("div", { key: conf.name + '_' + idx },
|
|
46
|
+
react_1.default.createElement(ConnectionRow, { conf: conf, session: session, breakConnection: breakConnection })))))));
|
|
47
|
+
});
|
|
48
|
+
exports.default = (0, mobx_react_1.observer)(function ToggleConnectionDialog({ session, handleClose, breakConnection, }) {
|
|
26
49
|
return (react_1.default.createElement(ui_1.Dialog, { open: true, onClose: handleClose, maxWidth: "lg", title: "Turn on/off connections" },
|
|
27
50
|
react_1.default.createElement(material_1.DialogContent, null,
|
|
28
51
|
react_1.default.createElement(material_1.Typography, null, "Use the checkbox to turn on/off connections"),
|
|
29
|
-
react_1.default.createElement(
|
|
30
|
-
connections.map(conf => {
|
|
31
|
-
const name = (0, configuration_1.readConfObject)(conf, 'name');
|
|
32
|
-
const assemblyNames = (0, configuration_1.readConfObject)(conf, 'assemblyNames');
|
|
33
|
-
const found = instances.find(conn => name === conn.name);
|
|
34
|
-
return (react_1.default.createElement(material_1.FormControlLabel, { key: conf.connectionId, control: react_1.default.createElement(material_1.Checkbox, { checked: !!found, onChange: () => {
|
|
35
|
-
var _a;
|
|
36
|
-
if (found) {
|
|
37
|
-
breakConnection(conf);
|
|
38
|
-
}
|
|
39
|
-
else {
|
|
40
|
-
(_a = session.makeConnection) === null || _a === void 0 ? void 0 : _a.call(session, conf);
|
|
41
|
-
}
|
|
42
|
-
}, color: "primary" }), label: `${name} ${assemblyNames.length
|
|
43
|
-
? '(' + ellipses(assemblyNames.join(',')) + ')'
|
|
44
|
-
: ''}` }));
|
|
45
|
-
}),
|
|
46
|
-
!connections.length ? (react_1.default.createElement(material_1.Typography, null, "No connections found")) : null)),
|
|
52
|
+
react_1.default.createElement(ConnectionList, { session: session, breakConnection: breakConnection })),
|
|
47
53
|
react_1.default.createElement(material_1.DialogActions, null,
|
|
48
54
|
react_1.default.createElement(material_1.Button, { onClick: () => handleClose(), variant: "contained", color: "primary" }, "Close"))));
|
|
49
|
-
}
|
|
50
|
-
exports.default = (0, mobx_react_1.observer)(ToggleConnectionDialog);
|
|
55
|
+
});
|
|
51
56
|
//# sourceMappingURL=ToggleConnectionsDialog.js.map
|
package/dist/HierarchicalTrackSelectorWidget/components/dialogs/ToggleConnectionsDialog.js.map
CHANGED
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"ToggleConnectionsDialog.js","sourceRoot":"","sources":["../../../../src/HierarchicalTrackSelectorWidget/components/dialogs/ToggleConnectionsDialog.tsx"],"names":[],"mappings":";;;;;;AAAA,kDAAyB;AACzB,4CAOsB;AACtB,yCAAyC;AACzC,uCAA0C;AAC1C,2CAAqC;AACrC,+DAGoC;AAGpC,SAAgB,QAAQ,CAAC,IAAY;IACnC,OAAO,IAAI,CAAC,MAAM,GAAG,EAAE,CAAC,CAAC,CAAC,GAAG,IAAI,CAAC,KAAK,CAAC,CAAC,EAAE,EAAE,CAAC,KAAK,CAAC,CAAC,CAAC,IAAI,CAAA;AAC5D,CAAC;AAFD,4BAEC;AAED,MAAM,SAAS,GAAG,IAAA,gBAAU,GAAE,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACvC,mBAAmB,EAAE;QACnB,KAAK,EAAE,GAAG;QACV,MAAM,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KACzB;CACF,CAAC,CAAC,CAAA;AAEH,
|
|
1
|
+
{"version":3,"file":"ToggleConnectionsDialog.js","sourceRoot":"","sources":["../../../../src/HierarchicalTrackSelectorWidget/components/dialogs/ToggleConnectionsDialog.tsx"],"names":[],"mappings":";;;;;;AAAA,kDAAyB;AACzB,4CAOsB;AACtB,yCAAyC;AACzC,uCAA0C;AAC1C,2CAAqC;AACrC,+DAGoC;AAGpC,SAAgB,QAAQ,CAAC,IAAY;IACnC,OAAO,IAAI,CAAC,MAAM,GAAG,EAAE,CAAC,CAAC,CAAC,GAAG,IAAI,CAAC,KAAK,CAAC,CAAC,EAAE,EAAE,CAAC,KAAK,CAAC,CAAC,CAAC,IAAI,CAAA;AAC5D,CAAC;AAFD,4BAEC;AAED,MAAM,SAAS,GAAG,IAAA,gBAAU,GAAE,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACvC,mBAAmB,EAAE;QACnB,KAAK,EAAE,GAAG;QACV,MAAM,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KACzB;CACF,CAAC,CAAC,CAAA;AAEH,MAAM,aAAa,GAAG,IAAA,qBAAQ,EAAC,SAAS,aAAa,CAAC,EACpD,IAAI,EACJ,OAAO,EACP,eAAe,GAKhB;IACC,MAAM,EAAE,mBAAmB,EAAE,SAAS,GAAG,EAAE,EAAE,GAAG,OAAO,CAAA;IACvD,MAAM,IAAI,GAAG,IAAA,8BAAc,EAAC,IAAI,EAAE,MAAM,CAAC,CAAA;IACzC,MAAM,aAAa,GAAG,IAAA,8BAAc,EAAC,IAAI,EAAE,eAAe,CAAC,CAAA;IAC3D,MAAM,KAAK,GAAG,SAAS,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC,IAAI,KAAK,IAAI,CAAC,IAAI,CAAC,CAAA;IACxD,OAAO,CACL,8BAAC,2BAAgB,IACf,GAAG,EAAE,IAAI,CAAC,YAAY,EACtB,OAAO,EACL,8BAAC,mBAAQ,IACP,OAAO,EAAE,CAAC,CAAC,KAAK,EAChB,QAAQ,EAAE,GAAG,EAAE;;gBACb,IAAI,KAAK,EAAE;oBACT,eAAe,CAAC,IAAI,CAAC,CAAA;iBACtB;qBAAM;oBACL,MAAA,OAAO,CAAC,cAAc,wDAAG,IAAI,CAAC,CAAA;iBAC/B;YACH,CAAC,EACD,KAAK,EAAC,SAAS,GACf,EAEJ,KAAK,EAAE;YACL,IAAI;YACJ,aAAa,CAAC,MAAM,CAAC,CAAC,CAAC,IAAI,QAAQ,CAAC,aAAa,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE;SACrE;aACE,MAAM,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC;aAChB,IAAI,CAAC,GAAG,CAAC,GACZ,CACH,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,MAAM,cAAc,GAAG,IAAA,qBAAQ,EAAC,SAAS,eAAe,CAAC,EACvD,OAAO,EACP,eAAe,GAIhB;IACC,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,OAAO,CACL,uCAAK,SAAS,EAAE,OAAO,CAAC,mBAAmB,IACxC,CAAC,OAAO,CAAC,WAAW,CAAC,MAAM,CAAC,CAAC,CAAC,CAC7B,8BAAC,qBAAU,+BAAkC,CAC9C,CAAC,CAAC,CAAC,CACF,OAAO,CAAC,WAAW,CAAC,GAAG,CAAC,CAAC,IAAI,EAAE,GAAG,EAAE,EAAE,CAAC,CACrC,uCAAK,GAAG,EAAE,IAAI,CAAC,IAAI,GAAG,GAAG,GAAG,GAAG;QAC7B,8BAAC,aAAa,IACZ,IAAI,EAAE,IAAI,EACV,OAAO,EAAE,OAAO,EAChB,eAAe,EAAE,eAAe,GAChC,CACE,CACP,CAAC,CACH,CACG,CACP,CAAA;AACH,CAAC,CAAC,CAAA;AAEF,kBAAe,IAAA,qBAAQ,EAAC,SAAS,sBAAsB,CAAC,EACtD,OAAO,EACP,WAAW,EACX,eAAe,GAKhB;IACC,OAAO,CACL,8BAAC,WAAM,IACL,IAAI,QACJ,OAAO,EAAE,WAAW,EACpB,QAAQ,EAAC,IAAI,EACb,KAAK,EAAC,yBAAyB;QAE/B,8BAAC,wBAAa;YACZ,8BAAC,qBAAU,sDAAyD;YACpE,8BAAC,cAAc,IAAC,OAAO,EAAE,OAAO,EAAE,eAAe,EAAE,eAAe,GAAI,CACxD;QAChB,8BAAC,wBAAa;YACZ,8BAAC,iBAAM,IACL,OAAO,EAAE,GAAG,EAAE,CAAC,WAAW,EAAE,EAC5B,OAAO,EAAC,WAAW,EACnB,KAAK,EAAC,SAAS,YAGR,CACK,CACT,CACV,CAAA;AACH,CAAC,CAAC,CAAA"}
|
|
@@ -1,3 +1,4 @@
|
|
|
1
|
+
import React from 'react';
|
|
1
2
|
export default function FacetFilters({ rows, columns, dispatch, filters, width, }: {
|
|
2
3
|
rows: Record<string, unknown>[];
|
|
3
4
|
filters: Record<string, string[]>;
|
|
@@ -9,4 +10,4 @@ export default function FacetFilters({ rows, columns, dispatch, filters, width,
|
|
|
9
10
|
val: string[];
|
|
10
11
|
}) => void;
|
|
11
12
|
width: number;
|
|
12
|
-
}): JSX.Element;
|
|
13
|
+
}): React.JSX.Element;
|
|
@@ -1,7 +1,8 @@
|
|
|
1
|
+
import React from 'react';
|
|
1
2
|
import { HierarchicalTrackSelectorModel } from '../../model';
|
|
2
3
|
declare function FacetedDlg(props: {
|
|
3
4
|
handleClose: () => void;
|
|
4
5
|
model: HierarchicalTrackSelectorModel;
|
|
5
|
-
}): JSX.Element;
|
|
6
|
+
}): React.JSX.Element;
|
|
6
7
|
declare const _default: typeof FacetedDlg;
|
|
7
8
|
export default _default;
|
|
@@ -1,3 +1,4 @@
|
|
|
1
|
+
import React from 'react';
|
|
1
2
|
import { HierarchicalTrackSelectorModel } from '../../model';
|
|
2
3
|
export default function FacetedHeader({ setFilterText, setUseShoppingCart, setHideSparse, setShowOptions, showOptions, hideSparse, useShoppingCart, filterText, model, }: {
|
|
3
4
|
setFilterText: (arg: string) => void;
|
|
@@ -9,4 +10,4 @@ export default function FacetedHeader({ setFilterText, setUseShoppingCart, setHi
|
|
|
9
10
|
useShoppingCart: boolean;
|
|
10
11
|
hideSparse: boolean;
|
|
11
12
|
model: HierarchicalTrackSelectorModel;
|
|
12
|
-
}): JSX.Element;
|
|
13
|
+
}): React.JSX.Element;
|
|
@@ -1,3 +1,4 @@
|
|
|
1
|
+
import React from 'react';
|
|
1
2
|
import { AnyConfigurationModel } from '@jbrowse/core/configuration';
|
|
2
3
|
import { HierarchicalTrackSelectorModel } from '../../model';
|
|
3
4
|
export interface InfoArgs {
|
|
@@ -7,5 +8,5 @@ export interface InfoArgs {
|
|
|
7
8
|
}
|
|
8
9
|
declare const _default: ({ model, }: {
|
|
9
10
|
model: HierarchicalTrackSelectorModel;
|
|
10
|
-
}) => JSX.Element;
|
|
11
|
+
}) => React.JSX.Element;
|
|
11
12
|
export default _default;
|