@jbrowse/plugin-data-management 2.2.1 → 2.3.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/AddTrackWidget/components/AddTrackWidget.js +28 -5
- package/dist/AddTrackWidget/components/AddTrackWidget.js.map +1 -1
- package/dist/AddTrackWidget/components/ConfirmTrack.d.ts +2 -3
- package/dist/AddTrackWidget/components/ConfirmTrack.js +30 -177
- package/dist/AddTrackWidget/components/ConfirmTrack.js.map +1 -1
- package/dist/AddTrackWidget/components/DefaultAddTrackWorkflow.js.map +1 -1
- package/dist/AddTrackWidget/components/TextIndexingConfig.d.ts +6 -0
- package/dist/AddTrackWidget/components/TextIndexingConfig.js +109 -0
- package/dist/AddTrackWidget/components/TextIndexingConfig.js.map +1 -0
- package/dist/AddTrackWidget/components/TrackAdapterSelector.d.ts +6 -0
- package/dist/AddTrackWidget/components/TrackAdapterSelector.js +50 -0
- package/dist/AddTrackWidget/components/TrackAdapterSelector.js.map +1 -0
- package/dist/AddTrackWidget/components/TrackTypeSelector.d.ts +6 -0
- package/dist/AddTrackWidget/components/TrackTypeSelector.js +27 -0
- package/dist/AddTrackWidget/components/TrackTypeSelector.js.map +1 -0
- package/dist/AssemblyManager/AssemblyAddForm.js +14 -41
- package/dist/AssemblyManager/AssemblyAddForm.js.map +1 -1
- package/dist/AssemblyManager/AssemblyEditor.js +2 -1
- package/dist/AssemblyManager/AssemblyEditor.js.map +1 -1
- package/dist/AssemblyManager/AssemblyManager.js +14 -54
- package/dist/AssemblyManager/AssemblyManager.js.map +1 -1
- package/dist/AssemblyManager/AssemblyTable.js +24 -47
- package/dist/AssemblyManager/AssemblyTable.js.map +1 -1
- package/dist/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.js +3 -4
- package/dist/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.js.map +1 -1
- package/dist/HierarchicalTrackSelectorWidget/components/ManageConnectionsDialog.js +4 -12
- package/dist/HierarchicalTrackSelectorWidget/components/ManageConnectionsDialog.js.map +1 -1
- package/dist/HierarchicalTrackSelectorWidget/components/ToggleConnectionsDialog.js +5 -13
- package/dist/HierarchicalTrackSelectorWidget/components/ToggleConnectionsDialog.js.map +1 -1
- package/dist/HierarchicalTrackSelectorWidget/model.d.ts +2 -1
- package/dist/HierarchicalTrackSelectorWidget/model.js +6 -6
- package/dist/HierarchicalTrackSelectorWidget/model.js.map +1 -1
- package/dist/PluginStoreWidget/components/CustomPluginForm.js +1 -11
- package/dist/PluginStoreWidget/components/CustomPluginForm.js.map +1 -1
- package/dist/PluginStoreWidget/components/PluginStoreWidget.js.map +1 -1
- package/dist/ucsc-trackhub/index.d.ts +2 -2
- package/dist/ucsc-trackhub/index.js.map +1 -1
- package/dist/ucsc-trackhub/model.d.ts +3 -2
- package/dist/ucsc-trackhub/model.js +41 -40
- package/dist/ucsc-trackhub/model.js.map +1 -1
- package/dist/ucsc-trackhub/ucscAssemblies.js.map +1 -1
- package/esm/AddTrackWidget/components/AddTrackWidget.js +6 -6
- package/esm/AddTrackWidget/components/AddTrackWidget.js.map +1 -1
- package/esm/AddTrackWidget/components/ConfirmTrack.d.ts +2 -3
- package/esm/AddTrackWidget/components/ConfirmTrack.js +28 -175
- package/esm/AddTrackWidget/components/ConfirmTrack.js.map +1 -1
- package/esm/AddTrackWidget/components/DefaultAddTrackWorkflow.js.map +1 -1
- package/esm/AddTrackWidget/components/TextIndexingConfig.d.ts +6 -0
- package/esm/AddTrackWidget/components/TextIndexingConfig.js +81 -0
- package/esm/AddTrackWidget/components/TextIndexingConfig.js.map +1 -0
- package/esm/AddTrackWidget/components/TrackAdapterSelector.d.ts +6 -0
- package/esm/AddTrackWidget/components/TrackAdapterSelector.js +45 -0
- package/esm/AddTrackWidget/components/TrackAdapterSelector.js.map +1 -0
- package/esm/AddTrackWidget/components/TrackTypeSelector.d.ts +6 -0
- package/esm/AddTrackWidget/components/TrackTypeSelector.js +22 -0
- package/esm/AddTrackWidget/components/TrackTypeSelector.js.map +1 -0
- package/esm/AssemblyManager/AssemblyAddForm.js +9 -36
- package/esm/AssemblyManager/AssemblyAddForm.js.map +1 -1
- package/esm/AssemblyManager/AssemblyEditor.js +2 -1
- package/esm/AssemblyManager/AssemblyEditor.js.map +1 -1
- package/esm/AssemblyManager/AssemblyManager.js +15 -55
- package/esm/AssemblyManager/AssemblyManager.js.map +1 -1
- package/esm/AssemblyManager/AssemblyTable.js +25 -48
- package/esm/AssemblyManager/AssemblyTable.js.map +1 -1
- package/esm/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.js +3 -4
- package/esm/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.js.map +1 -1
- package/esm/HierarchicalTrackSelectorWidget/components/ManageConnectionsDialog.js +5 -13
- package/esm/HierarchicalTrackSelectorWidget/components/ManageConnectionsDialog.js.map +1 -1
- package/esm/HierarchicalTrackSelectorWidget/components/ToggleConnectionsDialog.js +6 -14
- package/esm/HierarchicalTrackSelectorWidget/components/ToggleConnectionsDialog.js.map +1 -1
- package/esm/HierarchicalTrackSelectorWidget/model.d.ts +2 -1
- package/esm/HierarchicalTrackSelectorWidget/model.js +7 -7
- package/esm/HierarchicalTrackSelectorWidget/model.js.map +1 -1
- package/esm/PluginStoreWidget/components/CustomPluginForm.js +2 -12
- package/esm/PluginStoreWidget/components/CustomPluginForm.js.map +1 -1
- package/esm/PluginStoreWidget/components/PluginStoreWidget.js.map +1 -1
- package/esm/ucsc-trackhub/index.d.ts +2 -2
- package/esm/ucsc-trackhub/index.js.map +1 -1
- package/esm/ucsc-trackhub/model.d.ts +3 -2
- package/esm/ucsc-trackhub/model.js +41 -40
- package/esm/ucsc-trackhub/model.js.map +1 -1
- package/esm/ucsc-trackhub/ucscAssemblies.js.map +1 -1
- package/package.json +4 -5
- package/src/AddTrackWidget/components/AddTrackWidget.test.tsx +3 -4
- package/src/AddTrackWidget/components/AddTrackWidget.tsx +6 -9
- package/src/AddTrackWidget/components/ConfirmTrack.tsx +36 -296
- package/src/AddTrackWidget/components/DefaultAddTrackWorkflow.tsx +0 -1
- package/src/AddTrackWidget/components/TextIndexingConfig.tsx +134 -0
- package/src/AddTrackWidget/components/TrackAdapterSelector.tsx +73 -0
- package/src/AddTrackWidget/components/TrackTypeSelector.tsx +46 -0
- package/src/AssemblyManager/AssemblyAddForm.tsx +147 -182
- package/src/AssemblyManager/AssemblyEditor.tsx +5 -1
- package/src/AssemblyManager/AssemblyManager.test.tsx +1 -1
- package/src/AssemblyManager/AssemblyManager.tsx +70 -137
- package/src/AssemblyManager/AssemblyTable.tsx +65 -97
- package/src/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.tsx +4 -4
- package/src/HierarchicalTrackSelectorWidget/components/ManageConnectionsDialog.tsx +5 -20
- package/src/HierarchicalTrackSelectorWidget/components/ToggleConnectionsDialog.tsx +12 -22
- package/src/HierarchicalTrackSelectorWidget/components/__snapshots__/HierarchicalTrackSelector.test.tsx.snap +1 -1
- package/src/HierarchicalTrackSelectorWidget/model.ts +14 -9
- package/src/PluginStoreWidget/components/CustomPluginForm.tsx +1 -18
- package/src/PluginStoreWidget/components/PluginStoreWidget.tsx +1 -0
- package/src/PluginStoreWidget/components/__snapshots__/PluginStoreWidget.test.js.snap +0 -22
- package/src/ucsc-trackhub/{index.js → index.ts} +0 -0
- package/src/ucsc-trackhub/model.ts +119 -0
- package/src/ucsc-trackhub/{ucscAssemblies.js → ucscAssemblies.ts} +0 -0
- package/src/ucsc-trackhub/model.js +0 -125
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{"version":3,"file":"ManageConnectionsDialog.js","sourceRoot":"","sources":["../../../src/HierarchicalTrackSelectorWidget/components/ManageConnectionsDialog.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AACzB,OAAO,EACL,MAAM,EACN,aAAa,EACb,aAAa,EACb,UAAU,EACV,OAAO,EACP,UAAU,GACX,MAAM,eAAe,CAAA;AACtB,OAAO,EAAE,MAAM,EAAE,MAAM,kBAAkB,CAAA;AACzC,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAA;AAC1C,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AACrC,OAAO,EAEL,cAAc,GACf,MAAM,6BAA6B,CAAA;AAGpC,QAAQ;AACR,OAAO,SAAS,MAAM,2BAA2B,CAAA;AAEjD,MAAM,SAAS,GAAG,UAAU,EAAE,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACvC,mBAAmB,EAAE;QACnB,MAAM,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;QACxB,KAAK,EAAE,GAAG;KACX;CACF,CAAC,CAAC,CAAA;AAEH,SAAS,oBAAoB,CAAC,EAC5B,OAAO,EACP,WAAW,EACX,eAAe,GAKhB;IACC,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,MAAM,EAAE,SAAS,EAAE,WAAW,EAAE,kBAAkB,EAAE,GAAG,OAAO,CAAA;IAC9D,OAAO,CACL,oBAAC,MAAM,IAAC,IAAI,QAAC,OAAO,EAAE,WAAW,EAAE,QAAQ,EAAC,IAAI,EAAC,KAAK,EAAC,oBAAoB;QACzE,oBAAC,aAAa;YACZ,oBAAC,UAAU,gFAEE;YACb,6BAAK,SAAS,EAAE,OAAO,CAAC,mBAAmB;gBACxC,WAAW,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE;oBACtB,MAAM,IAAI,GAAG,cAAc,CAAC,IAAI,EAAE,MAAM,CAAC,CAAA;oBACzC,OAAO,CACL,oBAAC,UAAU,IAAC,GAAG,EAAE,QAAQ,IAAI,EAAE;wBAC5B,SAAS,KAAI,kBAAkB,aAAlB,kBAAkB,uBAAlB,kBAAkB,CAAE,QAAQ,CAAC,IAAI,CAAC,CAAA,CAAC,CAAC,CAAC,CACjD,oBAAC,UAAU,IAAC,OAAO,EAAE,GAAG,EAAE,CAAC,eAAe,CAAC,IAAI,EAAE,IAAI,CAAC;4BACpD,oBAAC,SAAS,IAAC,KAAK,EAAC,OAAO,GAAG,CAChB,CACd,CAAC,CAAC,CAAC,CACF,oBAAC,OAAO,IAAC,KAAK,EAAC,8DAA8D;4BAC3E,oBAAC,UAAU;gCACT,oBAAC,SAAS,IAAC,KAAK,EAAC,UAAU,GAAG,CACnB,CACL,CACX;wBACA,IAAI,CACM,CACd,CAAA;gBACH,CAAC,CAAC;gBACD,CAAC,WAAW,CAAC,MAAM,CAAC,CAAC,CAAC,CACrB,oBAAC,UAAU,+BAAkC,CAC9C,CAAC,CAAC,CAAC,IAAI,CACJ,CACQ;QAChB,oBAAC,aAAa;YACZ,oBAAC,MAAM,IACL,OAAO,EAAE,GAAG,EAAE,CAAC,WAAW,EAAE,EAC5B,OAAO,EAAC,WAAW,EACnB,KAAK,EAAC,SAAS,YAGR,CACK,CACT,CACV,CAAA;AACH,CAAC;AAED,eAAe,QAAQ,CAAC,oBAAoB,CAAC,CAAA"}
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import React from 'react';
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import { Button, Checkbox,
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import { Button, Checkbox, DialogContent, DialogActions, FormControlLabel, Typography, } from '@mui/material';
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import { Dialog } from '@jbrowse/core/ui';
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import { makeStyles } from 'tss-react/mui';
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import CloseIcon from '@mui/icons-material/Close';
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import { observer } from 'mobx-react';
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import { readConfObject, } from '@jbrowse/core/configuration';
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export function ellipses(slug) {
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return slug.length > 20 ? `${slug.slice(0, 20)}...` : slug;
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}
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const useStyles = makeStyles()(theme => ({
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closeButton: {
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position: 'absolute',
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connectionContainer: {
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width: 500,
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function ToggleConnectionDialog({ session, handleClose, breakConnection, }) {
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const { connections, connectionInstances: instances = [] } = session;
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return (React.createElement(Dialog, { open: true, onClose: handleClose, maxWidth: "lg" },
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"Turn on/off connections",
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React.createElement(IconButton, { className: classes.closeButton, onClick: () => handleClose() },
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React.createElement(CloseIcon, null))),
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return (React.createElement(Dialog, { open: true, onClose: handleClose, maxWidth: "lg", title: "Turn on/off connections" },
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React.createElement(Typography, null, "Use the checkbox to turn on/off connections"),
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React.createElement("div", { className: classes.connectionContainer },
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else {
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(_a = session.makeConnection) === null || _a === void 0 ? void 0 : _a.call(session, conf);
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}, color: "primary" }), label: `${name}
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}, color: "primary" }), label: `${name} ${assemblyNames.length
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? '(' + ellipses(assemblyNames.join(',')) + ')'
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: ''}` }));
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!connections.length ? (React.createElement(Typography, null, "No connections found")) : null)),
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React.createElement(DialogActions, null,
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@@ -1 +1 @@
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{"version":3,"file":"ToggleConnectionsDialog.js","sourceRoot":"","sources":["../../../src/HierarchicalTrackSelectorWidget/components/ToggleConnectionsDialog.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AACzB,OAAO,EACL,MAAM,EACN,QAAQ,EACR,
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{"version":3,"file":"ToggleConnectionsDialog.js","sourceRoot":"","sources":["../../../src/HierarchicalTrackSelectorWidget/components/ToggleConnectionsDialog.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,OAAO,CAAA;AACzB,OAAO,EACL,MAAM,EACN,QAAQ,EACR,aAAa,EACb,aAAa,EACb,gBAAgB,EAChB,UAAU,GACX,MAAM,eAAe,CAAA;AACtB,OAAO,EAAE,MAAM,EAAE,MAAM,kBAAkB,CAAA;AACzC,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAA;AAC1C,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AACrC,OAAO,EAEL,cAAc,GACf,MAAM,6BAA6B,CAAA;AAGpC,MAAM,UAAU,QAAQ,CAAC,IAAY;IACnC,OAAO,IAAI,CAAC,MAAM,GAAG,EAAE,CAAC,CAAC,CAAC,GAAG,IAAI,CAAC,KAAK,CAAC,CAAC,EAAE,EAAE,CAAC,KAAK,CAAC,CAAC,CAAC,IAAI,CAAA;AAC5D,CAAC;AAED,MAAM,SAAS,GAAG,UAAU,EAAE,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACvC,mBAAmB,EAAE;QACnB,KAAK,EAAE,GAAG;QACV,MAAM,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KACzB;CACF,CAAC,CAAC,CAAA;AAEH,SAAS,sBAAsB,CAAC,EAC9B,OAAO,EACP,WAAW,EACX,eAAe,GAKhB;IACC,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,MAAM,EAAE,WAAW,EAAE,mBAAmB,EAAE,SAAS,GAAG,EAAE,EAAE,GAAG,OAAO,CAAA;IACpE,OAAO,CACL,oBAAC,MAAM,IACL,IAAI,QACJ,OAAO,EAAE,WAAW,EACpB,QAAQ,EAAC,IAAI,EACb,KAAK,EAAC,yBAAyB;QAE/B,oBAAC,aAAa;YACZ,oBAAC,UAAU,sDAAyD;YACpE,6BAAK,SAAS,EAAE,OAAO,CAAC,mBAAmB;gBACxC,WAAW,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE;oBACtB,MAAM,IAAI,GAAG,cAAc,CAAC,IAAI,EAAE,MAAM,CAAC,CAAA;oBACzC,MAAM,aAAa,GAAG,cAAc,CAAC,IAAI,EAAE,eAAe,CAAC,CAAA;oBAC3D,MAAM,KAAK,GAAG,SAAS,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC,IAAI,KAAK,IAAI,CAAC,IAAI,CAAC,CAAA;oBACxD,OAAO,CACL,oBAAC,gBAAgB,IACf,GAAG,EAAE,IAAI,CAAC,YAAY,EACtB,OAAO,EACL,oBAAC,QAAQ,IACP,OAAO,EAAE,CAAC,CAAC,KAAK,EAChB,QAAQ,EAAE,GAAG,EAAE;;gCACb,IAAI,KAAK,EAAE;oCACT,eAAe,CAAC,IAAI,CAAC,CAAA;iCACtB;qCAAM;oCACL,MAAA,OAAO,CAAC,cAAc,wDAAG,IAAI,CAAC,CAAA;iCAC/B;4BACH,CAAC,EACD,KAAK,EAAC,SAAS,GACf,EAEJ,KAAK,EAAE,GAAG,IAAI,IACZ,aAAa,CAAC,MAAM;4BAClB,CAAC,CAAC,GAAG,GAAG,QAAQ,CAAC,aAAa,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,GAAG,GAAG;4BAC/C,CAAC,CAAC,EACN,EAAE,GACF,CACH,CAAA;gBACH,CAAC,CAAC;gBACD,CAAC,WAAW,CAAC,MAAM,CAAC,CAAC,CAAC,CACrB,oBAAC,UAAU,+BAAkC,CAC9C,CAAC,CAAC,CAAC,IAAI,CACJ,CACQ;QAChB,oBAAC,aAAa;YACZ,oBAAC,MAAM,IACL,OAAO,EAAE,GAAG,EAAE,CAAC,WAAW,EAAE,EAC5B,OAAO,EAAC,WAAW,EACnB,KAAK,EAAC,SAAS,YAGR,CACK,CACT,CACV,CAAA;AACH,CAAC;AAED,eAAe,QAAQ,CAAC,sBAAsB,CAAC,CAAA"}
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@@ -11,7 +11,7 @@ export type TreeNode = {
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};
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export declare function generateHierarchy(model: HierarchicalTrackSelectorModel, trackConfigurations: AnyConfigurationModel[], collapsed: {
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get: (arg: string) => boolean | undefined;
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}): TreeNode[];
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}, extra?: string): TreeNode[];
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export default function stateTreeFactory(pluginManager: PluginManager): import("mobx-state-tree").IModelType<{
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id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
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type: import("mobx-state-tree").ISimpleType<"HierarchicalTrackSelectorWidget">;
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@@ -62,6 +62,7 @@ export default function stateTreeFactory(pluginManager: PluginManager): import("
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})[];
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};
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connectionHierarchy(assemblyName: string, connection: {
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name: string;
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tracks: AnyConfigurationModel[];
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}): TreeNode[];
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}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;
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import { types, getSnapshot } from 'mobx-state-tree';
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import { getConf, readConfObject, } from '@jbrowse/core/configuration';
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import { getSession, getEnv } from '@jbrowse/core/util';
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import { dedupe, getSession, getEnv, } from '@jbrowse/core/util';
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import { getTrackName } from '@jbrowse/core/util/tracks';
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import { ElementId } from '@jbrowse/core/util/types/mst';
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function hasAnyOverlap(a1 = [], a2 = []) {
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@@ -29,7 +29,7 @@ function filterTracks(tracks, self, assemblyName) {
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return hasAnyOverlap(compatDisplays, trackDisplays);
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}
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export function generateHierarchy(model, trackConfigurations, collapsed) {
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export function generateHierarchy(model, trackConfigurations, collapsed, extra) {
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const hierarchy = { children: [] };
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const { filterText, view } = model;
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const session = getSession(model);
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@@ -49,7 +49,7 @@ export function generateHierarchy(model, trackConfigurations, collapsed) {
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for (let i = 0; i < categories.length; i++) {
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const ret = currLevel.children.find(c => c.name === category);
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const id = extra + '-' + categories.slice(0, i + 1).join(',');
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if (!ret) {
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const n = {
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children: [],
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}))
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.actions(self => ({
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addToSelection(elt) {
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self.selection = [...self.selection, ...elt];
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self.selection = dedupe([...self.selection, ...elt], e => e.trackId);
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removeFromSelection(elt) {
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self.selection = self.selection.filter(f => !elt.includes(f));
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const { assemblyManager } = getSession(self);
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(connectionInstances === null || connectionInstances === void 0 ? void 0 : connectionInstances.
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(connectionInstances === null || connectionInstances === void 0 ? void 0 : connectionInstances.map(c => ({
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// @ts-ignore
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@@ -174,7 +174,7 @@ export default function stateTreeFactory(pluginManager) {
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state: {
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})))) ||
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})).filter(f => f.children.length))) ||
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[];
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return {
|
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@@ -188,7 +188,7 @@ export default function stateTreeFactory(pluginManager) {
|
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connectionHierarchy(assemblyName, connection) {
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return generateHierarchy(
|
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// eslint-disable-next-line @typescript-eslint/no-explicit-any
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self, self.connectionTrackConfigurations(assemblyName, connection), self.collapsed);
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self, self.connectionTrackConfigurations(assemblyName, connection), self.collapsed, connection.name);
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@@ -1 +1 @@
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{"version":3,"file":"model.js","sourceRoot":"","sources":["../../src/HierarchicalTrackSelectorWidget/model.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,KAAK,EAAE,WAAW,EAAY,MAAM,iBAAiB,CAAA;AAC9D,OAAO,EACL,OAAO,EACP,cAAc,GAEf,MAAM,6BAA6B,CAAA;AACpC,OAAO,
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1
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+
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@@ -1,18 +1,12 @@
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1
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import React, { useState } from 'react';
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import { observer } from 'mobx-react';
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3
3
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import { getRoot } from 'mobx-state-tree';
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4
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-
import { Button, Collapse, Dialog, DialogActions,
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4
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+
import { Button, Collapse, Dialog, DialogActions, DialogContent, DialogContentText, TextField, } from '@mui/material';
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5
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import { makeStyles } from 'tss-react/mui';
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6
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// icons
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7
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import IconButton from '@mui/material/IconButton';
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8
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-
import CloseIcon from '@mui/icons-material/Close';
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8
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import ExpandMoreIcon from '@mui/icons-material/ExpandMore';
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10
9
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const useStyles = makeStyles()(theme => ({
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-
closeButton: {
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12
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-
position: 'absolute',
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13
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-
right: theme.spacing(1),
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14
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-
top: theme.spacing(1),
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15
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-
},
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dialogContent: {
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17
11
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display: 'flex',
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18
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flexDirection: 'column',
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@@ -80,11 +74,7 @@ function CustomPluginForm({ open, onClose, model, }) {
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80
74
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setCJSPluginUrl('');
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81
75
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onClose();
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82
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}
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83
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-
return (React.createElement(Dialog, { open: open, onClose: handleClose },
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84
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-
React.createElement(DialogTitle, null,
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85
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-
"Add custom plugin",
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86
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-
React.createElement(IconButton, { size: "medium", className: classes.closeButton, onClick: () => onClose() },
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87
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-
React.createElement(CloseIcon, null))),
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77
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+
return (React.createElement(Dialog, { open: open, onClose: handleClose, title: "Add custom plugin" },
|
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88
78
|
React.createElement("form", { onSubmit: handleSubmit },
|
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89
79
|
React.createElement(DialogContent, { className: classes.dialogContent },
|
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90
80
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React.createElement(DialogContentText, null, "Enter the name of the plugin and its URL. The name should match what is defined in the plugin's build."),
|
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@@ -1 +1 @@
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1
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-
{"version":3,"file":"CustomPluginForm.js","sourceRoot":"","sources":["../../../src/PluginStoreWidget/components/CustomPluginForm.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,QAAQ,EAAE,MAAM,OAAO,CAAA;AACvC,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AACrC,OAAO,EAAE,OAAO,EAAE,MAAM,iBAAiB,CAAA;AAEzC,OAAO,EACL,MAAM,EACN,QAAQ,EACR,MAAM,EACN,aAAa,EACb,
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1
|
+
{"version":3,"file":"CustomPluginForm.js","sourceRoot":"","sources":["../../../src/PluginStoreWidget/components/CustomPluginForm.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,QAAQ,EAAE,MAAM,OAAO,CAAA;AACvC,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AACrC,OAAO,EAAE,OAAO,EAAE,MAAM,iBAAiB,CAAA;AAEzC,OAAO,EACL,MAAM,EACN,QAAQ,EACR,MAAM,EACN,aAAa,EACb,aAAa,EACb,iBAAiB,EACjB,SAAS,GACV,MAAM,eAAe,CAAA;AACtB,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAA;AAE1C,QAAQ;AACR,OAAO,UAAU,MAAM,0BAA0B,CAAA;AACjD,OAAO,cAAc,MAAM,gCAAgC,CAAA;AAK3D,MAAM,SAAS,GAAG,UAAU,EAAE,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACvC,aAAa,EAAE;QACb,OAAO,EAAE,MAAM;QACf,aAAa,EAAE,QAAQ;KACxB;IACD,MAAM,EAAE;QACN,SAAS,EAAE,cAAc;QACzB,UAAU,EAAE,MAAM;QAClB,UAAU,EAAE,KAAK,CAAC,WAAW,CAAC,MAAM,CAAC,WAAW,EAAE;YAChD,QAAQ,EAAE,KAAK,CAAC,WAAW,CAAC,QAAQ,CAAC,QAAQ;SAC9C,CAAC;KACH;IACD,UAAU,EAAE;QACV,SAAS,EAAE,gBAAgB;KAC5B;CACF,CAAC,CAAC,CAAA;AAEH,SAAS,gBAAgB,CAAC,EACxB,IAAI,EACJ,OAAO,EACP,KAAK,GAKN;IACC,MAAM,EAAE,OAAO,EAAE,EAAE,EAAE,GAAG,SAAS,EAAE,CAAA;IACnC,MAAM,CAAC,aAAa,EAAE,gBAAgB,CAAC,GAAG,QAAQ,CAAC,EAAE,CAAC,CAAA;IACtD,MAAM,CAAC,YAAY,EAAE,eAAe,CAAC,GAAG,QAAQ,CAAC,EAAE,CAAC,CAAA;IACpD,MAAM,CAAC,YAAY,EAAE,eAAe,CAAC,GAAG,QAAQ,CAAC,EAAE,CAAC,CAAA;IACpD,MAAM,CAAC,YAAY,EAAE,eAAe,CAAC,GAAG,QAAQ,CAAC,EAAE,CAAC,CAAA;IACpD,MAAM,CAAC,mBAAmB,EAAE,sBAAsB,CAAC,GAAG,QAAQ,CAAC,KAAK,CAAC,CAAA;IAErE,SAAS,YAAY,CAAC,KAA6C;QACjE,MAAM,EAAE,IAAI,EAAE,KAAK,EAAE,GAAG,KAAK,CAAC,MAAM,CAAA;QACpC,IAAI,IAAI,KAAK,SAAS,EAAE;YACtB,gBAAgB,CAAC,KAAK,CAAC,CAAA;SACxB;QACD,IAAI,IAAI,KAAK,QAAQ,EAAE;YACrB,eAAe,CAAC,KAAK,CAAC,CAAA;SACvB;QACD,IAAI,IAAI,KAAK,QAAQ,EAAE;YACrB,eAAe,CAAC,KAAK,CAAC,CAAA;SACvB;QACD,IAAI,IAAI,KAAK,QAAQ,EAAE;YACrB,eAAe,CAAC,KAAK,CAAC,CAAA;SACvB;IACH,CAAC;IAED,SAAS,yBAAyB;QAChC,sBAAsB,CAAC,CAAC,mBAAmB,CAAC,CAAA;IAC9C,CAAC;IAED,8DAA8D;IAC9D,MAAM,EAAE,OAAO,EAAE,GAAG,OAAO,CAAM,KAAK,CAAC,CAAA;IAEvC,MAAM,KAAK,GAAG,OAAO,CACnB,CAAC,aAAa,IAAI,YAAY,CAAC,IAAI,YAAY,IAAI,YAAY,CAChE,CAAA;IAED,SAAS,YAAY;QACnB,IAAI,CAAC,KAAK,EAAE;YACV,OAAM;SACP;QACD,MAAM,gBAAgB,GAAqB,EAAE,CAAA;QAC7C,IAAI,aAAa,IAAI,YAAY,EAAE;YACjC,gBAAgB,CAAC,IAAI,GAAG,aAAa,CAAA;YACrC,gBAAgB,CAAC,MAAM,GAAG,YAAY,CAAA;SACvC;QACD,IAAI,YAAY,EAAE;YAChB,gBAAgB,CAAC,MAAM,GAAG,YAAY,CAAA;SACvC;QACD,IAAI,YAAY,EAAE;YAChB,gBAAgB,CAAC,MAAM,GAAG,YAAY,CAAA;SACvC;QACD,OAAO,CAAC,SAAS,CAAC,gBAAgB,CAAC,CAAA;IACrC,CAAC;IAED,SAAS,WAAW;QAClB,gBAAgB,CAAC,EAAE,CAAC,CAAA;QACpB,eAAe,CAAC,EAAE,CAAC,CAAA;QACnB,eAAe,CAAC,EAAE,CAAC,CAAA;QACnB,eAAe,CAAC,EAAE,CAAC,CAAA;QACnB,OAAO,EAAE,CAAA;IACX,CAAC;IAED,OAAO,CACL,oBAAC,MAAM,IAAC,IAAI,EAAE,IAAI,EAAE,OAAO,EAAE,WAAW,EAAE,KAAK,EAAC,mBAAmB;QACjE,8BAAM,QAAQ,EAAE,YAAY;YAC1B,oBAAC,aAAa,IAAC,SAAS,EAAE,OAAO,CAAC,aAAa;gBAC7C,oBAAC,iBAAiB,iHAGE;gBACpB,oBAAC,SAAS,IACR,EAAE,EAAC,gBAAgB,EACnB,IAAI,EAAC,SAAS,EACd,KAAK,EAAC,aAAa,EACnB,OAAO,EAAC,UAAU,EAClB,KAAK,EAAE,aAAa,EACpB,QAAQ,EAAE,YAAY,GACtB;gBACF,oBAAC,SAAS,IACR,EAAE,EAAC,eAAe,EAClB,IAAI,EAAC,QAAQ,EACb,KAAK,EAAC,YAAY,EAClB,OAAO,EAAC,UAAU,EAClB,KAAK,EAAE,YAAY,EACnB,QAAQ,EAAE,YAAY,GACtB;gBACF,oBAAC,iBAAiB,IAAC,OAAO,EAAE,yBAAyB;oBACnD,oBAAC,UAAU,IACT,SAAS,EAAE,EAAE,CAAC,OAAO,CAAC,MAAM,EAAE;4BAC5B,CAAC,OAAO,CAAC,UAAU,CAAC,EAAE,mBAAmB;yBAC1C,CAAC,mBACa,mBAAmB,gBACvB,WAAW;wBAEtB,oBAAC,cAAc,OAAG,CACP;uCAEK;gBACpB,oBAAC,QAAQ,IAAC,EAAE,EAAE,mBAAmB;oBAC/B,6BAAK,SAAS,EAAE,OAAO,CAAC,aAAa;wBACnC,oBAAC,iBAAiB,oQAKE;wBACpB,oBAAC,SAAS,IACR,EAAE,EAAC,eAAe,EAClB,IAAI,EAAC,QAAQ,EACb,KAAK,EAAC,eAAe,EACrB,OAAO,EAAC,UAAU,EAClB,KAAK,EAAE,YAAY,EACnB,QAAQ,EAAE,YAAY,GACtB;wBACF,oBAAC,SAAS,IACR,EAAE,EAAC,eAAe,EAClB,IAAI,EAAC,QAAQ,EACb,KAAK,EAAC,eAAe,EACrB,OAAO,EAAC,UAAU,EAClB,KAAK,EAAE,YAAY,EACnB,QAAQ,EAAE,YAAY,GACtB,CACE,CACG,CACG;YAChB,oBAAC,aAAa;gBACZ,oBAAC,MAAM,IAAC,OAAO,EAAC,WAAW,EAAC,OAAO,EAAE,WAAW,aAEvC;gBACT,oBAAC,MAAM,IACL,OAAO,EAAC,WAAW,EACnB,KAAK,EAAC,SAAS,EACf,OAAO,EAAE,YAAY,EACrB,QAAQ,EAAE,CAAC,KAAK,aAGT,CACK,CACX,CACA,CACV,CAAA;AACH,CAAC;AAED,eAAe,QAAQ,CAAC,gBAAgB,CAAC,CAAA"}
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"PluginStoreWidget.js","sourceRoot":"","sources":["../../../src/PluginStoreWidget/components/PluginStoreWidget.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,QAAQ,EAAE,SAAS,EAAE,MAAM,OAAO,CAAA;AAElD,OAAO,EACL,SAAS,EACT,gBAAgB,EAChB,MAAM,EACN,UAAU,EACV,cAAc,EACd,SAAS,EACT,UAAU,GACX,MAAM,eAAe,CAAA;AACtB,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAA;AAC1C,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AACrC,OAAO,EAAE,MAAM,EAAE,MAAM,iBAAiB,CAAA;AAExC,OAAO,EAAE,eAAe,EAAE,MAAM,kBAAkB,CAAA;AAClD,OAAO,EAAE,UAAU,EAAE,UAAU,EAAE,MAAM,oBAAoB,CAAA;AAE3D,QAAQ;AACR,OAAO,cAAc,MAAM,gCAAgC,CAAA;AAC3D,OAAO,SAAS,MAAM,2BAA2B,CAAA;AACjD,OAAO,gBAAgB,MAAM,kCAAkC,CAAA;AAE/D,SAAS;AACT,OAAO,oBAAoB,MAAM,wBAAwB,CAAA;AACzD,OAAO,UAAU,MAAM,cAAc,CAAA;AACrC,OAAO,gBAAgB,MAAM,oBAAoB,CAAA;AAGjD,MAAM,SAAS,GAAG,UAAU,EAAE,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACvC,IAAI,EAAE;QACJ,MAAM,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KACzB;IACD,UAAU,EAAE;QACV,KAAK,EAAE,MAAM;KACd;IACD,UAAU,EAAE;QACV,MAAM,EAAE,OAAO;QACf,YAAY,EAAE,CAAC;QACf,eAAe,EAAE,KAAK,CAAC,OAAO,CAAC,UAAU,CAAC,IAAI;QAC9C,OAAO,EAAE,KAAK;QACd,OAAO,EAAE,MAAM;QACf,YAAY,EAAE,QAAQ;KACvB;IACD,kBAAkB,EAAE;QAClB,MAAM,EAAE,OAAO;QACf,OAAO,EAAE,MAAM;QACf,cAAc,EAAE,QAAQ;KACzB;CACF,CAAC,CAAC,CAAA;AAEH,SAAS,iBAAiB,CAAC,EAAE,KAAK,EAA+B;IAC/D,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,MAAM,CAAC,WAAW,EAAE,cAAc,CAAC,GAAG,QAAQ,EAAmB,CAAA;IACjE,MAAM,CAAC,KAAK,EAAE,QAAQ,CAAC,GAAG,QAAQ,EAAW,CAAA;IAC7C,MAAM,CAAC,oBAAoB,EAAE,uBAAuB,CAAC,GAAG,QAAQ,CAAC,KAAK,CAAC,CAAA;IACvE,MAAM,EAAE,SAAS,EAAE,GAAG,UAAU,CAAC,KAAK,CAAC,CAAA;IACvC,MAAM,EAAE,aAAa,EAAE,GAAG,MAAM,CAAC,KAAK,CAAC,CAAA;IAEvC,SAAS,CAAC,GAAG,EAAE;QACb,MAAM,UAAU,GAAG,IAAI,eAAe,EAAE,CAAA;QACxC,MAAM,EAAE,MAAM,EAAE,GAAG,UAAU,
|
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1
|
+
{"version":3,"file":"PluginStoreWidget.js","sourceRoot":"","sources":["../../../src/PluginStoreWidget/components/PluginStoreWidget.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,QAAQ,EAAE,SAAS,EAAE,MAAM,OAAO,CAAA;AAElD,OAAO,EACL,SAAS,EACT,gBAAgB,EAChB,MAAM,EACN,UAAU,EACV,cAAc,EACd,SAAS,EACT,UAAU,GACX,MAAM,eAAe,CAAA;AACtB,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAA;AAC1C,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AACrC,OAAO,EAAE,MAAM,EAAE,MAAM,iBAAiB,CAAA;AAExC,OAAO,EAAE,eAAe,EAAE,MAAM,kBAAkB,CAAA;AAClD,OAAO,EAAE,UAAU,EAAE,UAAU,EAAE,MAAM,oBAAoB,CAAA;AAE3D,QAAQ;AACR,OAAO,cAAc,MAAM,gCAAgC,CAAA;AAC3D,OAAO,SAAS,MAAM,2BAA2B,CAAA;AACjD,OAAO,gBAAgB,MAAM,kCAAkC,CAAA;AAE/D,SAAS;AACT,OAAO,oBAAoB,MAAM,wBAAwB,CAAA;AACzD,OAAO,UAAU,MAAM,cAAc,CAAA;AACrC,OAAO,gBAAgB,MAAM,oBAAoB,CAAA;AAGjD,MAAM,SAAS,GAAG,UAAU,EAAE,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACvC,IAAI,EAAE;QACJ,MAAM,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KACzB;IACD,UAAU,EAAE;QACV,KAAK,EAAE,MAAM;KACd;IACD,UAAU,EAAE;QACV,MAAM,EAAE,OAAO;QACf,YAAY,EAAE,CAAC;QACf,eAAe,EAAE,KAAK,CAAC,OAAO,CAAC,UAAU,CAAC,IAAI;QAC9C,OAAO,EAAE,KAAK;QACd,OAAO,EAAE,MAAM;QACf,YAAY,EAAE,QAAQ;KACvB;IACD,kBAAkB,EAAE;QAClB,MAAM,EAAE,OAAO;QACf,OAAO,EAAE,MAAM;QACf,cAAc,EAAE,QAAQ;KACzB;CACF,CAAC,CAAC,CAAA;AAEH,SAAS,iBAAiB,CAAC,EAAE,KAAK,EAA+B;IAC/D,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,MAAM,CAAC,WAAW,EAAE,cAAc,CAAC,GAAG,QAAQ,EAAmB,CAAA;IACjE,MAAM,CAAC,KAAK,EAAE,QAAQ,CAAC,GAAG,QAAQ,EAAW,CAAA;IAC7C,MAAM,CAAC,oBAAoB,EAAE,uBAAuB,CAAC,GAAG,QAAQ,CAAC,KAAK,CAAC,CAAA;IACvE,MAAM,EAAE,SAAS,EAAE,GAAG,UAAU,CAAC,KAAK,CAAC,CAAA;IACvC,MAAM,EAAE,aAAa,EAAE,GAAG,MAAM,CAAC,KAAK,CAAC,CAAA;IAEvC,SAAS,CAAC,GAAG,EAAE;QACb,MAAM,UAAU,GAAG,IAAI,eAAe,EAAE,CAAA;QACxC,MAAM,EAAE,MAAM,EAAE,GAAG,UAAU,CAG5B;QAAA,CAAC,KAAK,IAAI,EAAE;YACX,IAAI;gBACF,MAAM,QAAQ,GAAG,MAAM,KAAK,CAC1B,+CAA+C,EAC/C,EAAE,MAAM,EAAE,CACX,CAAA;gBACD,IAAI,CAAC,QAAQ,CAAC,EAAE,EAAE;oBAChB,MAAM,GAAG,GAAG,MAAM,QAAQ,CAAC,IAAI,EAAE,CAAA;oBACjC,MAAM,IAAI,KAAK,CACb,gCAAgC,QAAQ,CAAC,MAAM,IAAI,QAAQ,CAAC,UAAU,IAAI,GAAG,EAAE,CAChF,CAAA;iBACF;gBACD,MAAM,KAAK,GAAG,MAAM,QAAQ,CAAC,IAAI,EAAE,CAAA;gBACnC,IAAI,CAAC,MAAM,CAAC,OAAO,EAAE;oBACnB,cAAc,CAAC,KAAK,CAAC,OAAO,CAAC,CAAA;iBAC9B;aACF;YAAC,OAAO,CAAC,EAAE;gBACV,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC,CAAA;gBAChB,QAAQ,CAAC,CAAC,CAAC,CAAA;aACZ;QACH,CAAC,CAAC,EAAE,CAAA;QAEJ,OAAO,GAAG,EAAE;YACV,UAAU,CAAC,KAAK,EAAE,CAAA;QACpB,CAAC,CAAA;IACH,CAAC,EAAE,EAAE,CAAC,CAAA;IAEN,OAAO,CACL,6BAAK,SAAS,EAAE,OAAO,CAAC,IAAI;QACzB,SAAS,IAAI,CACZ;YACG,CAAC,UAAU,IAAI,CACd,6BAAK,SAAS,EAAE,OAAO,CAAC,UAAU;gBAChC,oBAAC,gBAAgB,IAAC,KAAK,EAAE,EAAE,WAAW,EAAE,OAAO,EAAE,GAAI;gBACrD,oBAAC,UAAU;;oBACS,iDAAyB;kKAGhC,CACT,CACP;YACD,6BAAK,SAAS,EAAE,OAAO,CAAC,kBAAkB;gBACxC,oBAAC,MAAM,IACL,OAAO,EAAC,WAAW,EACnB,KAAK,EAAC,SAAS,EACf,OAAO,EAAE,GAAG,EAAE,CAAC,uBAAuB,CAAC,IAAI,CAAC,wBAGrC,CACL;YACN,oBAAC,gBAAgB,IACf,IAAI,EAAE,oBAAoB,EAC1B,OAAO,EAAE,GAAG,EAAE,CAAC,uBAAuB,CAAC,KAAK,CAAC,EAC7C,KAAK,EAAE,KAAK,GACZ,CACD,CACJ;QACD,oBAAC,SAAS,IACR,KAAK,EAAC,gBAAgB,EACtB,KAAK,EAAE,KAAK,CAAC,UAAU,EACvB,QAAQ,EAAE,KAAK,CAAC,EAAE,CAAC,KAAK,CAAC,aAAa,CAAC,KAAK,CAAC,MAAM,CAAC,KAAK,CAAC,EAC1D,SAAS,QACT,UAAU,EAAE;gBACV,YAAY,EAAE,CACZ,oBAAC,cAAc,IAAC,QAAQ,EAAC,KAAK;oBAC5B,oBAAC,UAAU,IACT,KAAK,EAAC,WAAW,EACjB,OAAO,EAAE,GAAG,EAAE,CAAC,KAAK,CAAC,eAAe,EAAE;wBAEtC,oBAAC,SAAS,OAAG,CACF,CACE,CAClB;aACF,GACD;QACF,oBAAC,SAAS,IAAC,eAAe;YACxB,oBAAC,gBAAgB,IACf,UAAU,EAAE,oBAAC,cAAc,IAAC,SAAS,EAAE,OAAO,CAAC,UAAU,GAAI;gBAE7D,oBAAC,UAAU,IAAC,OAAO,EAAC,IAAI,wBAA+B,CACtC;YACnB,6BAAK,KAAK,EAAE,EAAE,MAAM,EAAE,KAAK,EAAE;gBAC3B,oBAAC,oBAAoB,IAAC,aAAa,EAAE,aAAa,EAAE,KAAK,EAAE,KAAK,GAAI,CAChE,CACI;QACZ,oBAAC,SAAS,IAAC,eAAe;YACxB,oBAAC,gBAAgB,IACf,UAAU,EAAE,oBAAC,cAAc,IAAC,SAAS,EAAE,OAAO,CAAC,UAAU,GAAI;gBAE7D,oBAAC,UAAU,IAAC,OAAO,EAAC,IAAI,wBAA+B,CACtC;YAClB,KAAK,CAAC,CAAC,CAAC,CACP,oBAAC,UAAU,IAAC,KAAK,EAAC,OAAO,IAAE,GAAG,KAAK,EAAE,CAAc,CACpD,CAAC,CAAC,CAAC,WAAW,CAAC,CAAC,CAAC,CAChB,WAAW;iBACR,MAAM,CAAC,MAAM,CAAC,EAAE;gBACf,0DAA0D;gBAC1D,IACE,CAAC,UAAU;oBACX,CAAC,CAAC,MAAM,CAAC,MAAM,IAAI,MAAM,CAAC,GAAG,IAAI,MAAM,CAAC,MAAM,CAAC,EAC/C;oBACA,OAAO,KAAK,CAAA;iBACb;gBACD,OAAO,MAAM,CAAC,IAAI;qBACf,WAAW,EAAE;qBACb,QAAQ,CAAC,KAAK,CAAC,UAAU,CAAC,WAAW,EAAE,CAAC,CAAA;YAC7C,CAAC,CAAC;iBACD,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,CACb,oBAAC,UAAU,IACT,GAAG,EAAG,MAAwB,CAAC,IAAI,EACnC,MAAM,EAAE,MAAM,EACd,KAAK,EAAE,KAAK,EACZ,SAAS,EAAE,CAAC,CAAC,SAAS,GACtB,CACH,CAAC,CACL,CAAC,CAAC,CAAC,CACF,oBAAC,eAAe,OAAG,CACpB,CACS,CACR,CACP,CAAA;AACH,CAAC;AAED,eAAe,QAAQ,CAAC,iBAAiB,CAAC,CAAA"}
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@@ -1,2 +1,2 @@
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1
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-
export { default as modelFactory } from
|
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2
|
-
export { default as configSchema } from
|
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1
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+
export { default as modelFactory } from './model';
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2
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+
export { default as configSchema } from './configSchema';
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@@ -1 +1 @@
|
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1
|
-
{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/ucsc-trackhub/index.
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1
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+
{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/ucsc-trackhub/index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,IAAI,YAAY,EAAE,MAAM,SAAS,CAAA;AACjD,OAAO,EAAE,OAAO,IAAI,YAAY,EAAE,MAAM,gBAAgB,CAAA"}
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@@ -1,4 +1,5 @@
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1
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-
|
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1
|
+
import PluginManager from '@jbrowse/core/PluginManager';
|
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2
|
+
export default function UCSCTrackHubConnection(pluginManager: PluginManager): import("mobx-state-tree").IModelType<{
|
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2
3
|
name: import("mobx-state-tree").ISimpleType<string>;
|
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3
4
|
tracks: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IAnyModelType>;
|
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4
5
|
} & {
|
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@@ -23,5 +24,5 @@ export default function UCSCTrackHubConnection(pluginManager: any): import("mobx
|
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|
23
24
|
} & import("mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration").AnyConfigurationSchemaType>)[]): import("mobx-state-tree").IMSTArray<import("mobx-state-tree").IAnyModelType> & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IArrayType<import("mobx-state-tree").IAnyModelType>>;
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24
25
|
clear(): void;
|
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25
26
|
} & {
|
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26
|
-
connect(): void
|
|
27
|
+
connect(): Promise<void>;
|
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27
28
|
}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;
|
|
@@ -2,81 +2,82 @@ import { BaseConnectionModelFactory } from '@jbrowse/core/pluggableElementTypes/
|
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|
2
2
|
import { ConfigurationReference, readConfObject, getConf, } from '@jbrowse/core/configuration';
|
|
3
3
|
import { getSession } from '@jbrowse/core/util';
|
|
4
4
|
import { types } from 'mobx-state-tree';
|
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5
|
+
// locals
|
|
5
6
|
import configSchema from './configSchema';
|
|
6
7
|
import { fetchGenomesFile, fetchHubFile, fetchTrackDbFile, generateTracks, } from './ucscTrackHub';
|
|
7
8
|
export default function UCSCTrackHubConnection(pluginManager) {
|
|
8
|
-
return types
|
|
9
|
-
.model({
|
|
9
|
+
return types
|
|
10
|
+
.compose('UCSCTrackHubConnection', BaseConnectionModelFactory(pluginManager), types.model({
|
|
10
11
|
configuration: ConfigurationReference(configSchema),
|
|
11
12
|
type: types.literal('UCSCTrackHubConnection'),
|
|
12
|
-
})
|
|
13
|
+
}))
|
|
13
14
|
.actions(self => ({
|
|
14
|
-
connect() {
|
|
15
|
-
const connectionName = getConf(self, 'name');
|
|
16
|
-
const hubFileLocation = getConf(self, 'hubTxtLocation');
|
|
15
|
+
async connect() {
|
|
17
16
|
const session = getSession(self);
|
|
18
|
-
|
|
19
|
-
|
|
20
|
-
const
|
|
17
|
+
try {
|
|
18
|
+
const connectionName = getConf(self, 'name');
|
|
19
|
+
const hubFileLocation = getConf(self, 'hubTxtLocation');
|
|
20
|
+
const hubFile = await fetchHubFile(hubFileLocation);
|
|
21
|
+
const genomeFile = hubFile.get('genomesFile');
|
|
22
|
+
if (!genomeFile) {
|
|
23
|
+
throw new Error('genomesFile not found on hub');
|
|
24
|
+
}
|
|
25
|
+
const hubUri = new URL(hubFileLocation.uri, hubFileLocation.baseUri);
|
|
26
|
+
const genomesFileLocation = hubUri
|
|
21
27
|
? {
|
|
22
|
-
uri: new URL(
|
|
28
|
+
uri: new URL(genomeFile, hubUri).href,
|
|
23
29
|
locationType: 'UriLocation',
|
|
24
30
|
}
|
|
25
31
|
: {
|
|
26
|
-
localPath:
|
|
32
|
+
localPath: genomeFile,
|
|
27
33
|
locationType: 'LocalPathLocation',
|
|
28
34
|
};
|
|
29
|
-
|
|
30
|
-
hubFile,
|
|
31
|
-
fetchGenomesFile(genomesFileLocation),
|
|
32
|
-
]);
|
|
33
|
-
})
|
|
34
|
-
.then(([hubFile, genomesFile]) => {
|
|
35
|
+
const genomesFile = await fetchGenomesFile(genomesFileLocation);
|
|
35
36
|
const trackDbData = [];
|
|
36
37
|
for (const [genomeName, genome] of genomesFile) {
|
|
37
38
|
const assemblyNames = getConf(self, 'assemblyNames');
|
|
38
39
|
if (assemblyNames.length > 0 &&
|
|
39
40
|
!assemblyNames.includes(genomeName)) {
|
|
40
|
-
|
|
41
|
+
continue;
|
|
41
42
|
}
|
|
42
|
-
const
|
|
43
|
-
if (!
|
|
43
|
+
const conf = session.assemblies.find(a => readConfObject(a, 'name') === genomeName);
|
|
44
|
+
if (!conf) {
|
|
44
45
|
throw new Error(`Cannot find assembly for "${genomeName}" from the genomes file for connection "${connectionName}"`);
|
|
45
46
|
}
|
|
46
|
-
const
|
|
47
|
+
const trackDb = genome.get('trackDb');
|
|
48
|
+
if (!trackDb) {
|
|
49
|
+
throw new Error('genomesFile not found on hub');
|
|
50
|
+
}
|
|
51
|
+
const trackDbFileLocation = hubUri
|
|
47
52
|
? {
|
|
48
|
-
uri: new URL(
|
|
53
|
+
uri: new URL(trackDb, new URL(genomeFile, hubUri)).href,
|
|
49
54
|
locationType: 'UriLocation',
|
|
50
55
|
}
|
|
51
56
|
: {
|
|
52
|
-
localPath:
|
|
57
|
+
localPath: trackDb,
|
|
53
58
|
locationType: 'LocalPathLocation',
|
|
54
59
|
};
|
|
55
|
-
trackDbData.push(
|
|
60
|
+
trackDbData.push([
|
|
56
61
|
trackDbFileLocation,
|
|
57
|
-
fetchTrackDbFile(trackDbFileLocation),
|
|
62
|
+
await fetchTrackDbFile(trackDbFileLocation),
|
|
58
63
|
genomeName,
|
|
59
|
-
|
|
60
|
-
])
|
|
64
|
+
conf,
|
|
65
|
+
]);
|
|
61
66
|
}
|
|
62
|
-
|
|
63
|
-
|
|
64
|
-
.then(trackDbData => {
|
|
65
|
-
for (const [trackDbFileLocation, trackDbFile, genomeName, assemblyConf,] of trackDbData) {
|
|
66
|
-
const sequenceAdapter = readConfObject(assemblyConf, [
|
|
67
|
+
for (const [trackDbFileLocation, trackDbFile, genomeName, conf,] of trackDbData) {
|
|
68
|
+
const sequenceAdapter = readConfObject(conf, [
|
|
67
69
|
'sequence',
|
|
68
70
|
'adapter',
|
|
69
71
|
]);
|
|
70
|
-
|
|
71
|
-
self.addTrackConfs(tracks);
|
|
72
|
+
self.addTrackConfs(generateTracks(trackDbFile, trackDbFileLocation, genomeName, sequenceAdapter));
|
|
72
73
|
}
|
|
73
|
-
}
|
|
74
|
-
|
|
75
|
-
console.error(
|
|
76
|
-
session.notify(`There was a problem connecting to the UCSC Track Hub "${self.name}". Please make sure you have entered a valid hub.txt file. The error that was thrown is: "${
|
|
74
|
+
}
|
|
75
|
+
catch (e) {
|
|
76
|
+
console.error(e);
|
|
77
|
+
session.notify(`There was a problem connecting to the UCSC Track Hub "${self.configuration.name}". Please make sure you have entered a valid hub.txt file. The error that was thrown is: "${e}"`, 'error');
|
|
77
78
|
session.breakConnection(self.configuration);
|
|
78
|
-
}
|
|
79
|
+
}
|
|
79
80
|
},
|
|
80
|
-
}))
|
|
81
|
+
}));
|
|
81
82
|
}
|
|
82
83
|
//# sourceMappingURL=model.js.map
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"model.js","sourceRoot":"","sources":["../../src/ucsc-trackhub/model.
|
|
1
|
+
{"version":3,"file":"model.js","sourceRoot":"","sources":["../../src/ucsc-trackhub/model.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,0BAA0B,EAAE,MAAM,4CAA4C,CAAA;AACvF,OAAO,EACL,sBAAsB,EACtB,cAAc,EACd,OAAO,GACR,MAAM,6BAA6B,CAAA;AACpC,OAAO,EAAE,UAAU,EAAE,MAAM,oBAAoB,CAAA;AAC/C,OAAO,EAAE,KAAK,EAAE,MAAM,iBAAiB,CAAA;AAEvC,SAAS;AACT,OAAO,YAAY,MAAM,gBAAgB,CAAA;AACzC,OAAO,EACL,gBAAgB,EAChB,YAAY,EACZ,gBAAgB,EAChB,cAAc,GACf,MAAM,gBAAgB,CAAA;AAEvB,MAAM,CAAC,OAAO,UAAU,sBAAsB,CAAC,aAA4B;IACzE,OAAO,KAAK;SACT,OAAO,CACN,wBAAwB,EACxB,0BAA0B,CAAC,aAAa,CAAC,EACzC,KAAK,CAAC,KAAK,CAAC;QACV,aAAa,EAAE,sBAAsB,CAAC,YAAY,CAAC;QACnD,IAAI,EAAE,KAAK,CAAC,OAAO,CAAC,wBAAwB,CAAC;KAC9C,CAAC,CACH;SACA,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;QAChB,KAAK,CAAC,OAAO;YACX,MAAM,OAAO,GAAG,UAAU,CAAC,IAAI,CAAC,CAAA;YAChC,IAAI;gBACF,MAAM,cAAc,GAAG,OAAO,CAAC,IAAI,EAAE,MAAM,CAAC,CAAA;gBAC5C,MAAM,eAAe,GAAG,OAAO,CAAC,IAAI,EAAE,gBAAgB,CAAC,CAAA;gBACvD,MAAM,OAAO,GAAG,MAAM,YAAY,CAAC,eAAe,CAAC,CAAA;gBACnD,MAAM,UAAU,GAAG,OAAO,CAAC,GAAG,CAAC,aAAa,CAAC,CAAA;gBAC7C,IAAI,CAAC,UAAU,EAAE;oBACf,MAAM,IAAI,KAAK,CAAC,8BAA8B,CAAC,CAAA;iBAChD;gBAED,MAAM,MAAM,GAAG,IAAI,GAAG,CAAC,eAAe,CAAC,GAAG,EAAE,eAAe,CAAC,OAAO,CAAC,CAAA;gBACpE,MAAM,mBAAmB,GAAG,MAAM;oBAChC,CAAC,CAAC;wBACE,GAAG,EAAE,IAAI,GAAG,CAAC,UAAU,EAAE,MAAM,CAAC,CAAC,IAAI;wBACrC,YAAY,EAAE,aAAa;qBAC5B;oBACH,CAAC,CAAC;wBACE,SAAS,EAAE,UAAU;wBACrB,YAAY,EAAE,mBAAmB;qBAClC,CAAA;gBACL,MAAM,WAAW,GAAG,MAAM,gBAAgB,CAAC,mBAAmB,CAAC,CAAA;gBAC/D,MAAM,WAAW,GAAG,EAAE,CAAA;gBACtB,KAAK,MAAM,CAAC,UAAU,EAAE,MAAM,CAAC,IAAI,WAAW,EAAE;oBAC9C,MAAM,aAAa,GAAG,OAAO,CAAC,IAAI,EAAE,eAAe,CAAC,CAAA;oBACpD,IACE,aAAa,CAAC,MAAM,GAAG,CAAC;wBACxB,CAAC,aAAa,CAAC,QAAQ,CAAC,UAAU,CAAC,EACnC;wBACA,SAAQ;qBACT;oBACD,MAAM,IAAI,GAAG,OAAO,CAAC,UAAU,CAAC,IAAI,CAClC,CAAC,CAAC,EAAE,CAAC,cAAc,CAAC,CAAC,EAAE,MAAM,CAAC,KAAK,UAAU,CAC9C,CAAA;oBACD,IAAI,CAAC,IAAI,EAAE;wBACT,MAAM,IAAI,KAAK,CACb,6BAA6B,UAAU,2CAA2C,cAAc,GAAG,CACpG,CAAA;qBACF;oBACD,MAAM,OAAO,GAAG,MAAM,CAAC,GAAG,CAAC,SAAS,CAAC,CAAA;oBACrC,IAAI,CAAC,OAAO,EAAE;wBACZ,MAAM,IAAI,KAAK,CAAC,8BAA8B,CAAC,CAAA;qBAChD;oBACD,MAAM,mBAAmB,GAAG,MAAM;wBAChC,CAAC,CAAC;4BACE,GAAG,EAAE,IAAI,GAAG,CAAC,OAAO,EAAE,IAAI,GAAG,CAAC,UAAU,EAAE,MAAM,CAAC,CAAC,CAAC,IAAI;4BACvD,YAAY,EAAE,aAAa;yBAC5B;wBACH,CAAC,CAAC;4BACE,SAAS,EAAE,OAAO;4BAClB,YAAY,EAAE,mBAAmB;yBAClC,CAAA;oBACL,WAAW,CAAC,IAAI,CAAC;wBACf,mBAAmB;wBACnB,MAAM,gBAAgB,CAAC,mBAAmB,CAAC;wBAC3C,UAAU;wBACV,IAAI;qBACI,CAAC,CAAA;iBACZ;gBACD,KAAK,MAAM,CACT,mBAAmB,EACnB,WAAW,EACX,UAAU,EACV,IAAI,EACL,IAAI,WAAW,EAAE;oBAChB,MAAM,eAAe,GAAG,cAAc,CAAC,IAAI,EAAE;wBAC3C,UAAU;wBACV,SAAS;qBACV,CAAC,CAAA;oBACF,IAAI,CAAC,aAAa,CAChB,cAAc,CACZ,WAAW,EACX,mBAAmB,EACnB,UAAU,EACV,eAAe,CAChB,CACF,CAAA;iBACF;aACF;YAAC,OAAO,CAAC,EAAE;gBACV,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC,CAAA;gBAChB,OAAO,CAAC,MAAM,CACZ,yDAAyD,IAAI,CAAC,aAAa,CAAC,IAAI,6FAA6F,CAAC,GAAG,EACjL,OAAO,CACR,CAAA;gBACD,OAAO,CAAC,eAAe,CAAC,IAAI,CAAC,aAAa,CAAC,CAAA;aAC5C;QACH,CAAC;KACF,CAAC,CAAC,CAAA;AACP,CAAC"}
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"ucscAssemblies.js","sourceRoot":"","sources":["../../src/ucsc-trackhub/ucscAssemblies.
|
|
1
|
+
{"version":3,"file":"ucscAssemblies.js","sourceRoot":"","sources":["../../src/ucsc-trackhub/ucscAssemblies.ts"],"names":[],"mappings":"AAAA,yEAAyE;AACzE,yFAAyF;AACzF,oDAAoD;AAEpD,eAAe;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;QAoMP,CAAC,KAAK,CAAC,OAAO,CAAC,CAAA"}
|
package/package.json
CHANGED
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
{
|
|
2
2
|
"name": "@jbrowse/plugin-data-management",
|
|
3
|
-
"version": "2.
|
|
3
|
+
"version": "2.3.0",
|
|
4
4
|
"description": "JBrowse 2 linear genome view",
|
|
5
5
|
"keywords": [
|
|
6
6
|
"jbrowse",
|
|
@@ -27,7 +27,7 @@
|
|
|
27
27
|
"build": "npm-run-all build:*",
|
|
28
28
|
"test": "cd ../..; jest plugins/data-management",
|
|
29
29
|
"prepublishOnly": "yarn test",
|
|
30
|
-
"prepack": "yarn build
|
|
30
|
+
"prepack": "yarn build && yarn useDist",
|
|
31
31
|
"postpack": "yarn useSrc",
|
|
32
32
|
"useDist": "node ../../scripts/useDist.js",
|
|
33
33
|
"useSrc": "node ../../scripts/useSrc.js",
|
|
@@ -51,9 +51,8 @@
|
|
|
51
51
|
"mobx": "^6.0.0",
|
|
52
52
|
"mobx-react": "^7.0.0",
|
|
53
53
|
"mobx-state-tree": "^5.0.0",
|
|
54
|
-
"prop-types": "^15.0.0",
|
|
55
54
|
"react": ">=16.8.0",
|
|
56
|
-
"tss-react": "^
|
|
55
|
+
"tss-react": "^4.0.0"
|
|
57
56
|
},
|
|
58
57
|
"publishConfig": {
|
|
59
58
|
"access": "public"
|
|
@@ -61,5 +60,5 @@
|
|
|
61
60
|
"distModule": "esm/index.js",
|
|
62
61
|
"srcModule": "src/index.ts",
|
|
63
62
|
"module": "esm/index.js",
|
|
64
|
-
"gitHead": "
|
|
63
|
+
"gitHead": "a85b280a8af4d1a11e81ab42913f5f6049e6e580"
|
|
65
64
|
}
|
|
@@ -103,16 +103,15 @@ describe('<AddTrackWidget />', () => {
|
|
|
103
103
|
})
|
|
104
104
|
fireEvent.click(getAllByTestId('addTrackNextButton')[0])
|
|
105
105
|
fireEvent.mouseDown(getByTestId('adapterTypeSelect'))
|
|
106
|
-
const bamAdapter = await findByText('
|
|
106
|
+
const bamAdapter = await findByText('BAM adapter')
|
|
107
107
|
fireEvent.click(bamAdapter)
|
|
108
108
|
fireEvent.change(getByTestId('trackNameInput'), {
|
|
109
109
|
target: { value: 'Test track name' },
|
|
110
110
|
})
|
|
111
111
|
fireEvent.mouseDown(getByTestId('trackTypeSelect'))
|
|
112
|
-
fireEvent.click(await findByText('
|
|
112
|
+
fireEvent.click(await findByText('Feature track'))
|
|
113
113
|
fireEvent.mouseDown(getByTestId('assemblyNameSelect'))
|
|
114
|
-
|
|
115
|
-
fireEvent.click(volMyt1[1])
|
|
114
|
+
fireEvent.click((await findAllByText('volMyt1'))[1])
|
|
116
115
|
fireEvent.click(getAllByTestId('addTrackNextButton')[0])
|
|
117
116
|
expect(session.sessionTracks.length).toBe(2)
|
|
118
117
|
})
|
|
@@ -1,8 +1,7 @@
|
|
|
1
|
-
import React from 'react'
|
|
1
|
+
import React, { useState } from 'react'
|
|
2
2
|
import { observer } from 'mobx-react'
|
|
3
3
|
import { FormControl, FormHelperText, Select, MenuItem } from '@mui/material'
|
|
4
|
-
import {
|
|
5
|
-
import { getEnv, useLocalStorage } from '@jbrowse/core/util'
|
|
4
|
+
import { getEnv } from '@jbrowse/core/util'
|
|
6
5
|
|
|
7
6
|
// locals
|
|
8
7
|
import { AddTrackModel } from '../model'
|
|
@@ -10,19 +9,17 @@ import DefaultAddTrackWorkflow from './DefaultAddTrackWorkflow'
|
|
|
10
9
|
import PasteConfigWorkflow from './PasteConfigWorkflow'
|
|
11
10
|
|
|
12
11
|
function AddTrackSelector({ model }: { model: AddTrackModel }) {
|
|
13
|
-
const [val, setVal] =
|
|
12
|
+
const [val, setVal] = useState('Default add track workflow')
|
|
14
13
|
const { pluginManager } = getEnv(model)
|
|
15
|
-
const widgets = pluginManager.
|
|
16
|
-
'add track workflow',
|
|
17
|
-
) as AddTrackWorkflowType[]
|
|
14
|
+
const widgets = pluginManager.getAddTrackWorkflowElements()
|
|
18
15
|
const ComponentMap = {
|
|
19
|
-
Default: DefaultAddTrackWorkflow,
|
|
16
|
+
'Default add track workflow': DefaultAddTrackWorkflow,
|
|
20
17
|
'Add track JSON': PasteConfigWorkflow,
|
|
21
18
|
...Object.fromEntries(widgets.map(w => [w.name, w.ReactComponent])),
|
|
22
19
|
} as { [key: string]: React.FC<{ model: AddTrackModel }> }
|
|
23
20
|
|
|
24
21
|
// make sure the selected value is in the list
|
|
25
|
-
const val2 = ComponentMap[val] ? val : 'Default'
|
|
22
|
+
const val2 = ComponentMap[val] ? val : 'Default add track workflow'
|
|
26
23
|
const Component = ComponentMap[val2]
|
|
27
24
|
return (
|
|
28
25
|
<>
|