@jbrowse/core 4.2.1 → 5.0.0-beta.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.md +783 -0
- package/esm/BaseFeatureWidget/BaseFeatureDetail/ArrayValue.d.ts +13 -3
- package/esm/BaseFeatureWidget/BaseFeatureDetail/ArrayValue.js +33 -22
- package/esm/BaseFeatureWidget/BaseFeatureDetail/Attributes.d.ts +8 -3
- package/esm/BaseFeatureWidget/BaseFeatureDetail/Attributes.js +117 -19
- package/esm/BaseFeatureWidget/BaseFeatureDetail/BaseAttributes.d.ts +2 -8
- package/esm/BaseFeatureWidget/BaseFeatureDetail/BaseAttributes.js +4 -4
- package/esm/BaseFeatureWidget/BaseFeatureDetail/BaseCard.d.ts +1 -1
- package/esm/BaseFeatureWidget/BaseFeatureDetail/BaseCard.js +2 -2
- package/esm/BaseFeatureWidget/BaseFeatureDetail/BaseCoreDetails.d.ts +1 -1
- package/esm/BaseFeatureWidget/BaseFeatureDetail/BaseCoreDetails.js +4 -4
- package/esm/BaseFeatureWidget/BaseFeatureDetail/BasicValue.d.ts +1 -1
- package/esm/BaseFeatureWidget/BaseFeatureDetail/BasicValue.js +12 -5
- package/esm/BaseFeatureWidget/BaseFeatureDetail/CoreDetails.d.ts +1 -1
- package/esm/BaseFeatureWidget/BaseFeatureDetail/CoreDetails.js +28 -17
- package/esm/BaseFeatureWidget/BaseFeatureDetail/DataGridDetails.d.ts +1 -1
- package/esm/BaseFeatureWidget/BaseFeatureDetail/DataGridDetails.js +19 -40
- package/esm/BaseFeatureWidget/BaseFeatureDetail/FeatureDetails.d.ts +6 -4
- package/esm/BaseFeatureWidget/BaseFeatureDetail/FeatureDetails.js +46 -30
- package/esm/BaseFeatureWidget/BaseFeatureDetail/FeatureWash.d.ts +20 -0
- package/esm/BaseFeatureWidget/BaseFeatureDetail/FeatureWash.js +66 -0
- package/esm/BaseFeatureWidget/BaseFeatureDetail/FieldName.d.ts +1 -1
- package/esm/BaseFeatureWidget/BaseFeatureDetail/FieldName.js +2 -2
- package/esm/BaseFeatureWidget/BaseFeatureDetail/Formatter.d.ts +3 -0
- package/esm/BaseFeatureWidget/BaseFeatureDetail/Formatter.js +17 -0
- package/esm/BaseFeatureWidget/BaseFeatureDetail/Position.d.ts +1 -1
- package/esm/BaseFeatureWidget/BaseFeatureDetail/Position.js +3 -9
- package/esm/BaseFeatureWidget/BaseFeatureDetail/SimpleField.d.ts +3 -2
- package/esm/BaseFeatureWidget/BaseFeatureDetail/SimpleField.js +3 -3
- package/esm/BaseFeatureWidget/BaseFeatureDetail/UriField.d.ts +3 -2
- package/esm/BaseFeatureWidget/BaseFeatureDetail/UriField.js +7 -14
- package/esm/BaseFeatureWidget/BaseFeatureDetail/index.d.ts +2 -1
- package/esm/BaseFeatureWidget/BaseFeatureDetail/index.js +19 -13
- package/esm/BaseFeatureWidget/BaseFeatureDetail/types.d.ts +5 -4
- package/esm/BaseFeatureWidget/BaseFeatureDetail/util.d.ts +8 -1
- package/esm/BaseFeatureWidget/BaseFeatureDetail/util.js +32 -10
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequenceBody.d.ts +18 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequenceBody.js +10 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequenceContents.d.ts +7 -4
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequenceContents.js +62 -24
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequenceFeatureDetails.d.ts +10 -5
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequenceFeatureDetails.js +64 -41
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequenceFeaturePanel.d.ts +1 -1
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequenceFeaturePanel.js +17 -8
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequenceLegend.d.ts +6 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequenceLegend.js +19 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequenceName.d.ts +5 -4
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequenceName.js +15 -18
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequencePanel.d.ts +1 -1
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/SequencePanel.js +33 -17
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/consts.d.ts +3 -3
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/consts.js +7 -3
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/FeatureSequenceDialog.d.ts +11 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/FeatureSequenceDialog.js +29 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/HelpDialog.d.ts +1 -1
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/HelpDialog.js +4 -6
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/SequenceDialog.d.ts +18 -6
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/SequenceDialog.js +11 -29
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/SequenceFeatureMenu.d.ts +9 -2
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/SequenceFeatureMenu.js +63 -58
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/SequenceTypeSelector.d.ts +7 -3
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/SequenceTypeSelector.js +38 -51
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/SettingsDialog.d.ts +1 -1
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/SettingsDialog.js +19 -27
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/TranscriptSelector.d.ts +6 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/dialogs/TranscriptSelector.js +18 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/featureTypeUtil.d.ts +12 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/featureTypeUtil.js +97 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/index.js +1 -1
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/model.d.ts +50 -63
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/model.js +62 -59
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/panelAssemblyName.d.ts +21 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/panelAssemblyName.js +24 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/CDNASequence.d.ts +5 -3
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/CDNASequence.js +93 -75
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/CDSSequence.d.ts +1 -1
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/CDSSequence.js +4 -11
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/GenomicSequence.d.ts +5 -2
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/GenomicSequence.js +21 -48
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/PlainSequence.d.ts +8 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/PlainSequence.js +20 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/ProteinSequence.d.ts +6 -3
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/ProteinSequence.js +33 -13
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/SequenceDisplay.d.ts +7 -4
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/SequenceDisplay.js +67 -11
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/renderSequenceSegments.d.ts +14 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/seqtypes/renderSequenceSegments.js +42 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/test_data/DLGAP3.d.ts +1 -1
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/test_data/NCDN.d.ts +7 -7
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/types.d.ts +8 -1
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/useSequenceData.d.ts +9 -9
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/useSequenceData.js +28 -44
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/useSequenceFetch.d.ts +23 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/useSequenceFetch.js +31 -0
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/util.d.ts +90 -1
- package/esm/BaseFeatureWidget/SequenceFeatureDetails/util.js +145 -23
- package/esm/BaseFeatureWidget/configSchema.js +1 -1
- package/esm/BaseFeatureWidget/formatDetails.d.ts +38 -0
- package/esm/BaseFeatureWidget/formatDetails.js +103 -0
- package/esm/BaseFeatureWidget/index.d.ts +3 -1
- package/esm/BaseFeatureWidget/index.js +2 -2
- package/esm/BaseFeatureWidget/stateModelFactory.d.ts +80 -62
- package/esm/BaseFeatureWidget/stateModelFactory.js +128 -29
- package/esm/BaseFeatureWidget/types.d.ts +4 -3
- package/esm/BaseFeatureWidget/util.d.ts +4 -29
- package/esm/BaseFeatureWidget/util.js +20 -84
- package/esm/CorePlugin.js +11 -6
- package/esm/PhasedScheduler.d.ts +4 -2
- package/esm/PhasedScheduler.js +18 -2
- package/esm/Plugin.d.ts +6 -1
- package/esm/Plugin.js +7 -0
- package/esm/PluginLoader.d.ts +40 -40
- package/esm/PluginLoader.js +166 -82
- package/esm/PluginManager.d.ts +368 -55
- package/esm/PluginManager.js +326 -85
- package/esm/ReExports/BaseFeatureDetails.js +7 -6
- package/esm/ReExports/MuiDataGridReExports.d.ts +2 -2
- package/esm/ReExports/MuiDataGridReExports.js +58 -130
- package/esm/ReExports/MuiReExports.d.ts +3 -134
- package/esm/ReExports/MuiReExports.js +43 -16
- package/esm/ReExports/MuiStylesReExports.d.ts +66 -0
- package/esm/ReExports/MuiStylesReExports.js +55 -0
- package/esm/ReExports/index.js +1 -1
- package/esm/ReExports/lazify.d.ts +2 -2
- package/esm/ReExports/lazify.js +16 -3
- package/esm/ReExports/list.js +54 -229
- package/esm/ReExports/modules.js +84 -65
- package/esm/ReExports/muiComponentNames.d.ts +18 -0
- package/esm/ReExports/muiComponentNames.js +130 -0
- package/esm/ReExports/publicUtil.d.ts +1 -0
- package/esm/ReExports/publicUtil.js +28 -0
- package/esm/ReExports/registry.d.ts +2 -0
- package/esm/ReExports/registry.js +28 -0
- package/esm/TextSearch/BaseResults.d.ts +20 -21
- package/esm/TextSearch/BaseResults.js +8 -33
- package/esm/TextSearch/TextSearchManager.d.ts +14 -34
- package/esm/TextSearch/TextSearchManager.js +87 -34
- package/esm/assemblyManager/assembly.d.ts +307 -34
- package/esm/assemblyManager/assembly.js +551 -262
- package/esm/assemblyManager/assemblyAdapters.d.ts +12 -0
- package/esm/assemblyManager/assemblyAdapters.js +18 -0
- package/esm/assemblyManager/assemblyConfigSchema.d.ts +192 -17
- package/esm/assemblyManager/assemblyConfigSchema.js +213 -19
- package/esm/assemblyManager/assemblyManager.d.ts +711 -303
- package/esm/assemblyManager/assemblyManager.js +351 -46
- package/esm/assemblyManager/expandAssemblyConfigShorthand.d.ts +32 -0
- package/esm/assemblyManager/expandAssemblyConfigShorthand.js +85 -0
- package/esm/assemblyManager/geneticCodes.d.ts +21 -0
- package/esm/assemblyManager/geneticCodes.js +47 -0
- package/esm/assemblyManager/getSequenceAdapterConfig.d.ts +9 -0
- package/esm/assemblyManager/getSequenceAdapterConfig.js +12 -0
- package/esm/assemblyManager/index.d.ts +1 -1
- package/esm/assemblyManager/index.js +2 -2
- package/esm/assemblyManager/loadRefNameMap.d.ts +5 -0
- package/esm/assemblyManager/loadRefNameMap.js +80 -0
- package/esm/assemblyManager/refNameColors.d.ts +1 -0
- package/esm/assemblyManager/refNameColors.js +32 -0
- package/esm/assemblyManager/refNameMaps.d.ts +26 -0
- package/esm/assemblyManager/refNameMaps.js +87 -0
- package/esm/assemblyManager/refNameMismatch.d.ts +54 -0
- package/esm/assemblyManager/refNameMismatch.js +66 -0
- package/esm/checkPlugins.d.ts +11 -0
- package/esm/checkPlugins.js +77 -0
- package/esm/configuration/configurationSchema.d.ts +154 -19
- package/esm/configuration/configurationSchema.js +359 -138
- package/esm/configuration/configurationSlot.d.ts +283 -30
- package/esm/configuration/configurationSlot.js +205 -226
- package/esm/configuration/formatAboutConfigSchema.d.ts +55 -0
- package/esm/configuration/formatAboutConfigSchema.js +58 -0
- package/esm/configuration/formatDetailsConfigSchema.d.ts +80 -0
- package/esm/configuration/formatDetailsConfigSchema.js +90 -0
- package/esm/configuration/fullConfSnapshot.d.ts +28 -0
- package/esm/configuration/fullConfSnapshot.js +66 -0
- package/esm/configuration/getConf.d.ts +88 -0
- package/esm/configuration/getConf.js +74 -0
- package/esm/configuration/index.d.ts +19 -3
- package/esm/configuration/index.js +19 -2
- package/esm/configuration/mergeFormatCallbacks.d.ts +15 -0
- package/esm/configuration/mergeFormatCallbacks.js +24 -0
- package/esm/configuration/promotableDefaults.d.ts +199 -0
- package/esm/configuration/promotableDefaults.js +326 -0
- package/esm/configuration/promotablePin.d.ts +55 -0
- package/esm/configuration/promotableResolve.d.ts +108 -0
- package/esm/configuration/promotableResolve.js +117 -0
- package/esm/configuration/promotableSlots.d.ts +12 -0
- package/esm/configuration/promotableSlots.js +45 -0
- package/esm/configuration/readConfObject.d.ts +56 -0
- package/esm/configuration/readConfObject.js +161 -0
- package/esm/configuration/schemaRegistry.d.ts +35 -0
- package/esm/configuration/schemaRegistry.js +50 -0
- package/esm/configuration/schemaTypes.d.ts +23 -0
- package/esm/configuration/schemaTypes.js +94 -0
- package/esm/configuration/slotFacade.d.ts +82 -0
- package/esm/configuration/slotFacade.js +89 -0
- package/esm/configuration/slotShape.d.ts +12 -0
- package/esm/configuration/slotShape.js +84 -0
- package/esm/configuration/slotValueUtils.d.ts +17 -0
- package/esm/configuration/slotValueUtils.js +25 -0
- package/esm/configuration/tabixIndexFields.d.ts +44 -0
- package/esm/configuration/tabixIndexFields.js +45 -0
- package/esm/configuration/tabixShorthand.d.ts +34 -0
- package/esm/configuration/tabixShorthand.js +45 -0
- package/esm/configuration/types.d.ts +170 -7
- package/esm/data_adapters/BaseAdapter/BaseAdapter.d.ts +24 -10
- package/esm/data_adapters/BaseAdapter/BaseAdapter.js +23 -15
- package/esm/data_adapters/BaseAdapter/BaseFeatureDataAdapter.d.ts +120 -7
- package/esm/data_adapters/BaseAdapter/BaseFeatureDataAdapter.js +99 -27
- package/esm/data_adapters/BaseAdapter/BaseRefNameAliasAdapter.d.ts +1 -0
- package/esm/data_adapters/BaseAdapter/BaseSequenceAdapter.d.ts +13 -5
- package/esm/data_adapters/BaseAdapter/BaseSequenceAdapter.js +9 -7
- package/esm/data_adapters/BaseAdapter/BaseTextSearchAdapter.d.ts +2 -1
- package/esm/data_adapters/BaseAdapter/CytobandAdapter.d.ts +7 -0
- package/esm/data_adapters/BaseAdapter/RegionsAdapter.d.ts +2 -1
- package/esm/data_adapters/BaseAdapter/getAdapterId.d.ts +2 -0
- package/esm/data_adapters/BaseAdapter/getAdapterId.js +9 -0
- package/esm/data_adapters/BaseAdapter/index.d.ts +6 -4
- package/esm/data_adapters/BaseAdapter/index.js +5 -5
- package/esm/data_adapters/BaseAdapter/stats.d.ts +5 -5
- package/esm/data_adapters/BaseAdapter/stats.js +48 -22
- package/esm/data_adapters/BaseAdapter/types.d.ts +10 -8
- package/esm/data_adapters/BaseAdapter/types.js +1 -0
- package/esm/data_adapters/BaseAdapter/util.d.ts +5 -1
- package/esm/data_adapters/BaseAdapter/util.js +14 -3
- package/esm/data_adapters/CytobandAdapter/CytobandAdapter.d.ts +1 -1
- package/esm/data_adapters/CytobandAdapter/CytobandAdapter.js +4 -4
- package/esm/data_adapters/CytobandAdapter/configSchema.d.ts +36 -4
- package/esm/data_adapters/CytobandAdapter/configSchema.js +46 -2
- package/esm/data_adapters/CytobandAdapter/index.js +3 -3
- package/esm/data_adapters/adapterSessionRefcount.d.ts +61 -0
- package/esm/data_adapters/adapterSessionRefcount.js +96 -0
- package/esm/data_adapters/dataAdapterCache.d.ts +35 -1
- package/esm/data_adapters/dataAdapterCache.js +62 -22
- package/esm/data_adapters/getFeatureAdapter.d.ts +22 -0
- package/esm/data_adapters/getFeatureAdapter.js +27 -0
- package/esm/data_adapters/getSequenceSubAdapter.d.ts +21 -0
- package/esm/data_adapters/getSequenceSubAdapter.js +44 -0
- package/esm/pluggableElementTypes/AdapterType.d.ts +52 -2
- package/esm/pluggableElementTypes/AdapterType.js +44 -5
- package/esm/pluggableElementTypes/AddTrackWorkflowType.d.ts +6 -1
- package/esm/pluggableElementTypes/AddTrackWorkflowType.js +3 -1
- package/esm/pluggableElementTypes/ConnectionType.d.ts +5 -5
- package/esm/pluggableElementTypes/ConnectionType.js +1 -1
- package/esm/pluggableElementTypes/DisplayType.d.ts +10 -0
- package/esm/pluggableElementTypes/DisplayType.js +14 -1
- package/esm/pluggableElementTypes/InternetAccountType.js +1 -1
- package/esm/pluggableElementTypes/PluggableElementBase.d.ts +13 -0
- package/esm/pluggableElementTypes/PluggableElementBase.js +13 -0
- package/esm/pluggableElementTypes/RpcMethodType.d.ts +132 -12
- package/esm/pluggableElementTypes/RpcMethodType.js +263 -98
- package/esm/pluggableElementTypes/RpcMethodTypeWithFiltersAndRenameRegions.d.ts +19 -9
- package/esm/pluggableElementTypes/RpcMethodTypeWithFiltersAndRenameRegions.js +26 -20
- package/esm/pluggableElementTypes/RpcMethodTypeWithRenameRegion.d.ts +5 -0
- package/esm/pluggableElementTypes/RpcMethodTypeWithRenameRegion.js +18 -0
- package/esm/pluggableElementTypes/RpcMethodTypeWithRenameRegions.d.ts +5 -0
- package/esm/pluggableElementTypes/RpcMethodTypeWithRenameRegions.js +10 -0
- package/esm/pluggableElementTypes/TextSearchAdapterType.d.ts +3 -3
- package/esm/pluggableElementTypes/TextSearchAdapterType.js +3 -1
- package/esm/pluggableElementTypes/TrackType.d.ts +2 -1
- package/esm/pluggableElementTypes/TrackType.js +1 -1
- package/esm/pluggableElementTypes/ViewType.d.ts +2 -1
- package/esm/pluggableElementTypes/ViewType.js +9 -2
- package/esm/pluggableElementTypes/WidgetType.d.ts +2 -2
- package/esm/pluggableElementTypes/WidgetType.js +1 -1
- package/esm/pluggableElementTypes/addMenuItems.d.ts +87 -0
- package/esm/pluggableElementTypes/addMenuItems.js +82 -0
- package/esm/pluggableElementTypes/extendElementType.d.ts +30 -0
- package/esm/pluggableElementTypes/extendElementType.js +68 -0
- package/esm/pluggableElementTypes/index.d.ts +7 -7
- package/esm/pluggableElementTypes/index.js +24 -14
- package/esm/pluggableElementTypes/models/BaseConnectionModelFactory.d.ts +70 -15
- package/esm/pluggableElementTypes/models/BaseConnectionModelFactory.js +90 -10
- package/esm/pluggableElementTypes/models/BaseDisplayModel.d.ts +605 -84
- package/esm/pluggableElementTypes/models/BaseDisplayModel.js +172 -64
- package/esm/pluggableElementTypes/models/BaseTrackModel.d.ts +196 -55
- package/esm/pluggableElementTypes/models/BaseTrackModel.js +332 -85
- package/esm/pluggableElementTypes/models/BaseViewModel.d.ts +167 -16
- package/esm/pluggableElementTypes/models/BaseViewModel.js +111 -16
- package/esm/pluggableElementTypes/models/HighlightsMixin.d.ts +51 -0
- package/esm/pluggableElementTypes/models/HighlightsMixin.js +78 -0
- package/esm/pluggableElementTypes/models/InternetAccountModel.d.ts +163 -29
- package/esm/pluggableElementTypes/models/InternetAccountModel.js +218 -48
- package/esm/pluggableElementTypes/models/assertDisplayContract.d.ts +174 -0
- package/esm/pluggableElementTypes/models/assertDisplayContract.js +246 -0
- package/esm/pluggableElementTypes/models/baseConnectionConfig.d.ts +22 -8
- package/esm/pluggableElementTypes/models/baseConnectionConfig.js +18 -2
- package/esm/pluggableElementTypes/models/baseInternetAccountConfig.d.ts +39 -20
- package/esm/pluggableElementTypes/models/baseInternetAccountConfig.js +23 -2
- package/esm/pluggableElementTypes/models/baseTrackConfig.d.ts +181 -65
- package/esm/pluggableElementTypes/models/baseTrackConfig.js +191 -89
- package/esm/pluggableElementTypes/models/components/SaveTrackData.d.ts +3 -8
- package/esm/pluggableElementTypes/models/components/SaveTrackData.js +113 -139
- package/esm/pluggableElementTypes/models/components/fetchTrackData.d.ts +55 -0
- package/esm/pluggableElementTypes/models/components/fetchTrackData.js +83 -0
- package/esm/pluggableElementTypes/models/expandTrackConfigShorthand.d.ts +40 -0
- package/esm/pluggableElementTypes/models/expandTrackConfigShorthand.js +115 -0
- package/esm/pluggableElementTypes/models/index.d.ts +6 -3
- package/esm/pluggableElementTypes/models/index.js +10 -8
- package/esm/pluggableElementTypes/models/migrateTrackConfig.d.ts +34 -0
- package/esm/pluggableElementTypes/models/migrateTrackConfig.js +54 -0
- package/esm/pluggableElementTypes/models/saveTrackFileTypes/bed.js +75 -7
- package/esm/pluggableElementTypes/models/saveTrackFileTypes/genbank.d.ts +9 -3
- package/esm/pluggableElementTypes/models/saveTrackFileTypes/genbank.js +153 -103
- package/esm/pluggableElementTypes/models/saveTrackFileTypes/gff3.d.ts +6 -1
- package/esm/pluggableElementTypes/models/saveTrackFileTypes/gff3.js +70 -74
- package/esm/pluggableElementTypes/models/saveTrackFileTypes/types.d.ts +9 -1
- package/esm/pluggableElementTypes/models/saveTrackFileTypes/util.d.ts +21 -0
- package/esm/pluggableElementTypes/models/saveTrackFileTypes/util.js +51 -0
- package/esm/pluggableElementTypes/models/uriMatchesDomains.d.ts +29 -0
- package/esm/pluggableElementTypes/models/uriMatchesDomains.js +62 -0
- package/esm/pluggableElementTypes/renderers/util/serializableFilterChain.d.ts +5 -4
- package/esm/pluggableElementTypes/renderers/util/serializableFilterChain.js +20 -10
- package/esm/pluginDefinitions.d.ts +198 -0
- package/esm/pluginDefinitions.js +220 -0
- package/esm/rpc/BaseRpcDriver.d.ts +27 -35
- package/esm/rpc/BaseRpcDriver.js +74 -107
- package/esm/rpc/MainThreadRpcDriver.d.ts +9 -10
- package/esm/rpc/MainThreadRpcDriver.js +18 -29
- package/esm/rpc/RpcClient.d.ts +38 -0
- package/esm/rpc/RpcClient.js +154 -0
- package/esm/rpc/RpcManager.d.ts +116 -27
- package/esm/rpc/RpcManager.js +177 -50
- package/esm/rpc/RpcRegistry.d.ts +265 -0
- package/esm/rpc/RpcRegistry.js +1 -0
- package/esm/rpc/RpcServer.d.ts +41 -0
- package/esm/rpc/RpcServer.js +235 -0
- package/esm/rpc/WebWorkerRpcDriver.d.ts +71 -24
- package/esm/rpc/WebWorkerRpcDriver.js +312 -27
- package/esm/rpc/byteBudget.d.ts +49 -0
- package/esm/rpc/byteBudget.js +50 -0
- package/esm/rpc/configSchema.d.ts +27 -5
- package/esm/rpc/configSchema.js +40 -16
- package/esm/rpc/coreRpcMethods.d.ts +2 -5
- package/esm/rpc/coreRpcMethods.js +9 -12
- package/esm/rpc/explainTransferError.d.ts +35 -0
- package/esm/rpc/explainTransferError.js +158 -0
- package/esm/rpc/methods/CoreFreeResources.d.ts +19 -4
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- package/esm/util/when.js +0 -1
- /package/esm/{data_adapters/BaseAdapter/BaseOptions.js → configuration/promotablePin.js} +0 -0
- /package/esm/{util/layouts/BaseLayout.js → data_adapters/BaseAdapter/CytobandAdapter.js} +0 -0
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import type { FeatureFormatter } from '../types.tsx';
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/**
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* An array of objects renders each element as its own `Attributes` block and
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* other field, and so takes its place in the card's shared label column.
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* Exported because `Attributes` measures that column before rendering and has
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*/
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export declare function isObjectArray(value: unknown[]): value is Record<string, unknown>[];
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export default function ArrayValue({ name, value, description, formatter, prefix, width, }: {
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description?: React.ReactNode;
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name: string;
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formatter?:
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formatter?: FeatureFormatter;
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prefix?: string[];
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width?: number;
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}): import("react").JSX.Element;
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import {
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import { Fragment as _Fragment, jsx as _jsx, jsxs as _jsxs } from "react/jsx-runtime";
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import { useState } from 'react';
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import
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import { isObject } from '../../util/index.js';
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import { makeStyles } from '../../util/tss-react/index.js';
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import Attributes from './Attributes.js';
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import BasicValue from './BasicValue.js';
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import FieldName from './FieldName.js';
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const MAX_ARRAY_LENGTH = 100;
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// Numeric arrays (e.g. base-modification probabilities, per-base scores) are
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// rarely read element-by-element and can be thousands long, so only a handful
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// are shown until expanded
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const MAX_NUMERIC_ARRAY_LENGTH = 5;
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const useStyles = makeStyles()(theme => ({
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field: {
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display: 'flex',
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}));
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/**
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* An array of objects renders each element as its own `Attributes` block and
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* draws no label row at this level; anything else is one labelled row like any
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* other field, and so takes its place in the card's shared label column.
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* Exported because `Attributes` measures that column before rendering and has
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* to make the same call.
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*/
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export function isObjectArray(value) {
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return value.every(isObject);
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}
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export default function ArrayValue({ name, value, description, formatter, prefix = [], width, }) {
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const { classes } = useStyles();
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const [showAll, setShowAll] = useState(false);
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const
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? 'Show less'
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: `Showing ${MAX_ARRAY_LENGTH} of ${value.length}. Show all...` })) : null] }));
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}
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const limit = value.every(v => typeof v === 'number')
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? MAX_NUMERIC_ARRAY_LENGTH
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: MAX_ARRAY_LENGTH;
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const needsTruncation = value.length > limit;
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const displayedValues = needsTruncation && !showAll ? value.slice(0, limit) : value;
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return isObjectArray(value) ? (value.length === 1 ? (_jsx(Attributes, { formatter: formatter, attributes: value[0], prefix: [...prefix, name] })) : (_jsx(_Fragment, { children: value.map((val, i) => (_jsx(Attributes
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// eslint-disable-next-line @eslint-react/no-array-index-key -- static positional list of attribute objects, no unique field available
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, { formatter: formatter, attributes: val, prefix: [...prefix, `${name}-${i}`] }, i))) }))) : (_jsxs("div", { className: classes.field, children: [_jsx(FieldName, { prefix: prefix, description: description, name: name, width: width }), value.length === 1 ? (_jsx(BasicValue, { value: formatter ? formatter(value[0], name, 0) : value[0] })) : (_jsxs(_Fragment, { children: [displayedValues.map((val, i) => (_jsx("div", { className: classes.fieldSubvalue, children: _jsx(BasicValue, { value: formatter ? formatter(val, name, i) : val }) }, `${String(val)}-${i}`))), needsTruncation ? (_jsx("button", { type: "button", onClick: () => {
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setShowAll(v => !v);
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}, children: showAll
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? 'Show less'
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: `Showing ${limit} of ${value.length}. Show all...` })) : null] }))] }));
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}
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import type { Descriptors } from '../types.tsx';
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import type { Descriptors, FeatureFormatter } from '../types.tsx';
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export default function Attributes(props: {
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attributes: {
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[key: string]: unknown;
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};
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omit?: string[];
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omitSingleLevel?: string[];
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formatter?:
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formatter?: FeatureFormatter;
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descriptions?: Descriptors;
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prefix?: string[];
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hideUris?: boolean;
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/**
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* The label column's width, measured once for the whole card and threaded
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* down the recursion. Set by `Attributes` itself; a caller leaves it alone.
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*/
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labelWidth?: number;
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}): import("react").JSX.Element;
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@@ -1,11 +1,31 @@
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import {
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import {
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import { Fragment as _Fragment, jsx as _jsx } from "react/jsx-runtime";
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import { Suspense, lazy } from 'react';
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import { isLocalPathLocation, isObject, isUriLocation, measureText, } from '../../util/index.js';
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import ArrayValue, { isObjectArray } from './ArrayValue.js';
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import SimpleField from './SimpleField.js';
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import UriAttribute from './UriField.js';
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import { accessNested, applyFeatureFormatting } from './util.js';
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// Lazy: reaches @mui/x-data-grid, and this module sits on the eager startup
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// path via product-core's ui barrel (AboutDialog -> AboutDialogContents).
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// Only a homogeneous object array actually renders a grid.
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const DataGridDetails = lazy(() => import('./DataGridDetails.js'));
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const MAX_FIELD_NAME_WIDTH = 170;
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// must match FieldName's own font size and horizontal padding, or the measured
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// column is not the width the label needs
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const FIELD_NAME_FONT_SIZE = 12;
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const FIELD_NAME_PADDING = 10;
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// Max extra unique columns vs. first row before falling back to per-row field
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// sections instead of the data grid (avoids a mostly-empty, hard-to-read grid)
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const DATAGRID_SCHEMA_TOLERANCE = 5;
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function isHomogeneousObjectArray(arr) {
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if (arr.length <= 1 || !arr.every(isObject)) {
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return false;
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}
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const firstKeyCount = Object.keys(arr[0]).length;
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const unionKeyCount = new Set(arr.flatMap(Object.keys)).size;
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return unionKeyCount < firstKeyCount + DATAGRID_SCHEMA_TOLERANCE;
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}
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// these are always omitted as too detailed
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const globalOmit = [
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'__jbrowsefmt',
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'length',
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'subfeatures',
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'uniqueId',
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'exonFrames',
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'_exonFrames',
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'parentId',
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'thickStart',
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'thickEnd',
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// BED12/bigGenePred parsing internals (block/CDS-shape bookkeeping, not
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// meaningful feature attributes)
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'chromStarts',
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'blockStarts',
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'blockSizes',
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'blockCount',
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'reserved',
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'cdsStartStat',
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'cdsEndStat',
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];
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/**
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* The widest label `Attributes` will actually render under `attributes`, in
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* text units — the padding is added once by `widestLabel`, not per level.
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*
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* Follows the same branches the render below does: a flat array is one labelled
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* row (`rendersOwnFieldRow`), an array of objects renders each element as its
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* own block with no label at this level, a data grid heads its own grid rather
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* than sharing a row, a `UriLocation` is one field, any other object recurses.
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* Kept next to the render for that reason — the two agree by being read
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* together, and `Attributes.test.tsx` fails if they stop.
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*/
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function measureLabels(attributes, opts) {
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const { omits, deepOmits, hideUris, prefix } = opts;
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let widest = 0;
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const measure = (key) => measureText([...prefix, key].join('.'), FIELD_NAME_FONT_SIZE);
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for (const [key, value] of Object.entries(applyFeatureFormatting(attributes))) {
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if (value == null || omits.has(key)) {
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continue;
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}
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if (Array.isArray(value)) {
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// a data grid's FieldName is a heading above the grid, not a cell beside
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// a value, so it takes no part in the column either
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if (!isHomogeneousObjectArray(value) && !isObjectArray(value)) {
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widest = Math.max(widest, measure(key));
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}
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}
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else if (isObject(value)) {
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if (hideUris && (isUriLocation(value) || isLocalPathLocation(value))) {
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continue;
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}
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widest = Math.max(widest, isUriLocation(value)
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? measure(key)
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: measureLabels(value, {
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omits: deepOmits,
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deepOmits,
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hideUris,
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prefix: [...prefix, key],
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}));
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}
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else {
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widest = Math.max(widest, measure(key));
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}
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}
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return widest;
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}
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function widestLabel(attributes, opts) {
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return Math.ceil(measureLabels(attributes, opts)) + FIELD_NAME_PADDING;
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}
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export default function Attributes(props) {
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const { attributes, omit = [], omitSingleLevel = [], descriptions, formatter, hideUris, prefix = [], } = props;
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const { attributes, omit = [], omitSingleLevel = [], descriptions, formatter, hideUris, prefix = [], labelWidth, } = props;
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const omits = new Set([...omit, ...globalOmit, ...omitSingleLevel]);
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const
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const
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const filteredFormattedAttributes = Object.entries(applyFeatureFormatting(attributes)).filter(([k, v]) => v != null && !omits.has(k));
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// Measured over the whole subtree on the outermost call, then handed down, so
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// one card has one label column. Per-level measurement put `type`/`trackId` in
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// a narrow column, `adapter.type` in a wider one and `adapter.craiLocation` in
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// a wider one still — three ragged steps down a single card.
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const width = Math.min(labelWidth ??
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widestLabel(attributes, {
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omits,
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// `omitSingleLevel` is what its name says: the recursive call below
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// passes only `omit` on, so the measurement must stop honoring it at
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// the same depth or it measures a label that isn't there
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deepOmits: omitSingleLevel.length
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? new Set([...omit, ...globalOmit])
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: omits,
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hideUris,
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prefix,
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}), MAX_FIELD_NAME_WIDTH);
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return (_jsx(_Fragment, { children: filteredFormattedAttributes.map(([key, value]) => {
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const description = accessNested([...prefix, key], descriptions);
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if (Array.isArray(value)) {
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// Only use the data grid when schemas are homogeneous enough;
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// heterogeneous arrays fall through to ArrayValue which renders
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// each object as individual field sections instead of disappearing
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return isHomogeneousObjectArray(value) ? (_jsx(Suspense, { fallback: null, children: _jsx(DataGridDetails, { name: key, prefix: prefix, value: value }) }, key)) : (_jsx(ArrayValue, { name: key, value: value, formatter: formatter, description: description, prefix: prefix, width: width }, key));
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}
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else if (isObject(value)) {
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// hideUris means "don't show where the data sits". A LocalPathLocation
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// says that as plainly as a UriLocation does — it is what desktop and
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// `jbrowse add-track --load copy` write — and it used to fall through
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// to the recursive branch below and print the path in full
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if (hideUris &&
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(isUriLocation(value) || isLocalPathLocation(value))) {
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return null;
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}
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return isUriLocation(value) ? (_jsx(UriAttribute, { name: key, prefix: prefix, value: value, width: width }, key)) : (_jsx(Attributes, { attributes: value, omit: omit, descriptions: descriptions, formatter: formatter, hideUris: hideUris, prefix: [...prefix, key], labelWidth: width }, key));
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}
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else {
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return (_jsx(SimpleField, { name: key, formatter: formatter, value: value, description: description, prefix: prefix, width:
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return (_jsx(SimpleField, { name: key, formatter: formatter, value: value, description: description, prefix: prefix, width: width }, key));
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}
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}) }));
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}
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@@ -1,8 +1,2 @@
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import type {
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export
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omit?: string[];
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model: any;
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descriptions?: Record<string, React.ReactNode>;
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formatter?: (val: unknown, key: string) => React.ReactNode;
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}
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export default function BaseAttributes(props: BaseProps): import("react/jsx-runtime").JSX.Element;
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import type { BaseProps } from '../types.tsx';
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export default function BaseAttributes(props: BaseProps): import("react").JSX.Element;
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|
@@ -1,7 +1,7 @@
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1
1
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import { jsx as _jsx } from "react/jsx-runtime";
|
|
2
|
-
import Attributes from
|
|
3
|
-
import BaseCard from
|
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2
|
+
import Attributes from './Attributes.js';
|
|
3
|
+
import BaseCard from './BaseCard.js';
|
|
4
4
|
export default function BaseAttributes(props) {
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|
5
|
-
const { title = 'Attributes', feature } = props;
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6
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-
return (_jsx(BaseCard, {
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5
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const { title = 'Attributes', defaultExpanded, feature } = props;
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return (_jsx(BaseCard, { title: title, defaultExpanded: defaultExpanded, children: _jsx(Attributes, { ...props, attributes: feature }) }));
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7
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import type { BaseCardProps } from '../types.tsx';
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export default function BaseCard({ children, title, defaultExpanded, }: BaseCardProps): import("react
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export default function BaseCard({ children, title, defaultExpanded, }: BaseCardProps): import("react").JSX.Element;
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import { jsx as _jsx, jsxs as _jsxs } from "react/jsx-runtime";
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import ExpandMore from '@mui/icons-material/ExpandMore';
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import { Accordion, AccordionDetails, AccordionSummary, Typography, } from '@mui/material';
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import { makeStyles } from
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import { makeStyles } from '../../util/tss-react/index.js';
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const useStyles = makeStyles()(theme => ({
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expansionPanelDetails: {
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}));
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export default function BaseCard({ children, title, defaultExpanded = true, }) {
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const { classes } = useStyles();
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-
return (_jsxs(Accordion, { defaultExpanded: defaultExpanded, children: [_jsx(AccordionSummary, { expandIcon: _jsx(ExpandMore, { className: classes.icon }), children: _jsx(Typography, { variant: "button", children: title }) }), _jsx(AccordionDetails, { className: classes.expansionPanelDetails, children: children })] }));
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return (_jsxs(Accordion, { defaultExpanded: defaultExpanded, slotProps: { transition: { unmountOnExit: true } }, "data-testid": `BaseCard-${title}`, children: [_jsx(AccordionSummary, { expandIcon: _jsx(ExpandMore, { className: classes.icon }), children: _jsx(Typography, { variant: "button", children: title }) }), _jsx(AccordionDetails, { className: classes.expansionPanelDetails, children: children })] }));
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import type { BaseProps } from '../types.tsx';
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export default function BaseCoreDetails(props: BaseProps): import("react
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export default function BaseCoreDetails(props: BaseProps): import("react").JSX.Element;
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@@ -1,7 +1,7 @@
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import { jsx as _jsx } from "react/jsx-runtime";
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import BaseCard from
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import CoreDetails from
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import BaseCard from './BaseCard.js';
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import CoreDetails from './CoreDetails.js';
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export default function BaseCoreDetails(props) {
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const { title = 'Primary data' } = props;
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return (_jsx(BaseCard, {
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const { title = 'Primary data', defaultExpanded } = props;
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return (_jsx(BaseCard, { title: title, defaultExpanded: defaultExpanded, children: _jsx(CoreDetails, { ...props }) }));
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}
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@@ -1,9 +1,9 @@
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import { jsx as _jsx } from "react/jsx-runtime";
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import { isValidElement } from 'react';
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import { Link } from '@mui/material';
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import { SanitizedHTML } from
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import { isObject } from
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import { makeStyles } from
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import { SanitizedHTML } from '../../ui/index.js';
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import { isObject } from '../../util/index.js';
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import { makeStyles } from '../../util/tss-react/index.js';
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const useStyles = makeStyles()(theme => ({
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fieldValue: {
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wordBreak: 'break-word',
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@@ -15,6 +15,13 @@ const useStyles = makeStyles()(theme => ({
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}));
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export default function BasicValue({ value }) {
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const { classes } = useStyles();
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// a value that is nothing but a URL is a link, whether it came from the file
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// or from a formatDetails callback -- the same courtesy `linkify` does for a
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// URL sitting inside a longer string, one layer down in SanitizedHTML.
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//
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// New tab, matching `rewriteExternalAnchors` on that other path. Navigating
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// in place discards the session, and in an embedded JBrowse it takes the host
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// page with it.
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const isLink = /^https?:\/\//.test(`${value}`);
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return (_jsx("div", { className: classes.fieldValue, children: isValidElement(value) ? (value) : isLink ? (_jsx(Link, { href: `${value}`, target: "_blank", rel: "noopener noreferrer", children: `${value}` })) : (_jsx(SanitizedHTML, { html: isObject(value) ? JSON.stringify(value) : String(value) })) }));
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}
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import type { BaseProps } from '../types.tsx';
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export default function CoreDetails(props: BaseProps): import("react
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+
export default function CoreDetails(props: BaseProps): import("react").JSX.Element;
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@@ -1,24 +1,35 @@
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import {
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import
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import
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import
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1
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import { Fragment as _Fragment, jsx as _jsx, jsxs as _jsxs } from "react/jsx-runtime";
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import { toLocale } from '../../util/index.js';
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import Position from './Position.js';
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import SimpleField from './SimpleField.js';
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import { applyFeatureFormatting, isFormattedField } from './util.js';
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export default function CoreDetails(props) {
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const { feature } = props;
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-
const
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const formattedFeat = { ...obj, ...obj.__jbrowsefmt };
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const formattedFeat = applyFeatureFormatting(feature);
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const { start, end } = formattedFeat;
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const displayedDetails = {
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...formattedFeat,
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// Length is derived, so it is computed rather than read off the feature --
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// but a formatDetails callback that names `length` still wins (and
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+
// `length: null` hides the row), like every other core field. The raw
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+
// feature's own `length`, if any, stays ignored: it is in Attributes'
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// globalOmit precisely because adapters use it as bookkeeping.
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+
length: isFormattedField(feature, 'length')
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+
? formattedFeat.length
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+
: toLocale(end - start),
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};
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.
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// array (not object) so the display order is explicit, not reliant on JS key
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// insertion order
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+
const coreRenderedDetails = [
|
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24
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+
['name', 'Name'],
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25
|
+
['description', 'Description'],
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26
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+
['length', 'Length'],
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+
['type', 'Type'],
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+
];
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+
return (_jsxs(_Fragment, { children: [_jsx(SimpleField, { name: "Position", value: _jsx(Position, { ...props, feature: formattedFeat }) }), coreRenderedDetails
|
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|
+
.filter(([key]) => displayedDetails[key] != null)
|
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|
+
.map(([key, name]) => {
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+
const value = displayedDetails[key];
|
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+
return (_jsx(SimpleField, { name: name, value: Array.isArray(value) ? value.join(', ') : value }, name));
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34
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+
})] }));
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24
35
|
}
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@@ -1,12 +1,12 @@
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1
1
|
import { jsx as _jsx, jsxs as _jsxs } from "react/jsx-runtime";
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2
2
|
import { useState } from 'react';
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3
|
-
import {
|
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3
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+
import { Typography } from '@mui/material';
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4
4
|
import { DataGrid } from '@mui/x-data-grid';
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-
import
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-
import
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7
|
-
import {
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8
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-
import {
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9
|
-
import
|
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5
|
+
import DataGridFlexContainer from '../../ui/DataGridFlexContainer.js';
|
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6
|
+
import { LabeledCheckbox, SanitizedHTML } from '../../ui/index.js';
|
|
7
|
+
import { getStr, measureGridWidth } from '../../util/index.js';
|
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8
|
+
import { makeStyles } from '../../util/tss-react/index.js';
|
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9
|
+
import FieldName from './FieldName.js';
|
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10
10
|
const useStyles = makeStyles()(theme => ({
|
|
11
11
|
margin: {
|
|
12
12
|
marginBottom: theme.spacing(4),
|
|
@@ -20,38 +20,17 @@ const useStyles = makeStyles()(theme => ({
|
|
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20
20
|
export default function DataGridDetails({ value, prefix, name, }) {
|
|
21
21
|
const { classes } = useStyles();
|
|
22
22
|
const [checked, setChecked] = useState(false);
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23
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-
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24
|
-
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25
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-
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26
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-
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-
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-
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-
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-
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33
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-
|
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34
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-
|
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35
|
-
|
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36
|
-
}
|
|
37
|
-
}
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|
38
|
-
let colNames;
|
|
39
|
-
if (unionKeys.has('id')) {
|
|
40
|
-
unionKeys.delete('id');
|
|
41
|
-
colNames = ['identifier', ...unionKeys];
|
|
42
|
-
}
|
|
43
|
-
else {
|
|
44
|
-
colNames = [...unionKeys];
|
|
45
|
-
}
|
|
46
|
-
const widths = colNames.map(e => measureGridWidth(rows.map(r => r[e])));
|
|
47
|
-
if (unionKeys.size < keys.length + 5) {
|
|
48
|
-
return (_jsxs("div", { className: classes.margin, children: [_jsx(FieldName, { prefix: prefix, name: name }), _jsx(FormControlLabel, { control: _jsx(Checkbox, { checked: checked, onChange: event => {
|
|
49
|
-
setChecked(event.target.checked);
|
|
50
|
-
} }), label: _jsx(Typography, { variant: "body2", children: "Show options" }) }), _jsx(DataGridFlexContainer, { children: _jsx(DataGrid, { disableRowSelectionOnClick: true, rows: rows, rowHeight: 20, columnHeaderHeight: 35, hideFooter: rows.length < 25, showToolbar: checked, columns: colNames.map((val, index) => ({
|
|
51
|
-
field: val,
|
|
52
|
-
width: widths[index],
|
|
53
|
-
renderCell: ({ value }) => (_jsx("div", { className: classes.cell, children: _jsx(SanitizedHTML, { html: getStr(value || '') }) })),
|
|
54
|
-
})) }) })] }));
|
|
55
|
-
}
|
|
56
|
-
return null;
|
|
23
|
+
// DataGrid needs a unique row id; rather than commandeering any 'id' field
|
|
24
|
+
// the feature itself carries, tag each row with the array index and point
|
|
25
|
+
// getRowId at it, leaving the feature's own keys (including 'id') untouched
|
|
26
|
+
const rows = value.map((val, k) => ({ ...val, __dataGridRowId: k }));
|
|
27
|
+
const cols = [...new Set(value.flatMap(Object.keys))];
|
|
28
|
+
const widths = cols.map(col => measureGridWidth(value.map(r => r[col])));
|
|
29
|
+
return (_jsxs("div", { className: classes.margin, children: [_jsx(FieldName, { prefix: prefix, name: name }), _jsx(LabeledCheckbox, { checked: checked, onChange: val => {
|
|
30
|
+
setChecked(val);
|
|
31
|
+
}, label: _jsx(Typography, { variant: "body2", children: "Show options" }) }), _jsx(DataGridFlexContainer, { children: _jsx(DataGrid, { disableRowSelectionOnClick: true, rows: rows, getRowId: row => row.__dataGridRowId, rowHeight: 20, columnHeaderHeight: 35, hideFooter: rows.length < 25, showToolbar: checked, columns: cols.map((field, index) => ({
|
|
32
|
+
field,
|
|
33
|
+
width: widths[index],
|
|
34
|
+
renderCell: ({ value }) => (_jsx("div", { className: classes.cell, children: _jsx(SanitizedHTML, { html: getStr(value ?? '') }) })),
|
|
35
|
+
})) }) })] }));
|
|
57
36
|
}
|
|
@@ -1,11 +1,13 @@
|
|
|
1
1
|
import type { SimpleFeatureSerialized } from '../../util/index.ts';
|
|
2
|
-
import type { Descriptors } from '../types.tsx';
|
|
2
|
+
import type { Descriptors, FeatureFormatter } from '../types.tsx';
|
|
3
3
|
import type { IAnyStateTreeNode } from '@jbrowse/mobx-state-tree';
|
|
4
|
-
|
|
4
|
+
interface FeatureDetailsProps {
|
|
5
5
|
model: IAnyStateTreeNode;
|
|
6
6
|
feature: SimpleFeatureSerialized;
|
|
7
7
|
depth?: number;
|
|
8
8
|
omit?: string[];
|
|
9
9
|
descriptions?: Descriptors;
|
|
10
|
-
formatter?:
|
|
11
|
-
}
|
|
10
|
+
formatter?: FeatureFormatter;
|
|
11
|
+
}
|
|
12
|
+
declare const FeatureDetails: (props: FeatureDetailsProps) => import("react").JSX.Element;
|
|
13
|
+
export default FeatureDetails;
|