@jafreck/lore 0.2.5 → 0.3.0

package/dist/indexer/stages/source-index.js

@@ -0,0 +1,314 @@
+/**
+ * @module indexer/stages/source-index
+ *
+ * Pipeline stage: walk, parse, extract, and insert symbols/imports/callRefs/
+ * typeRefs/relationships/routes/annotations for all source files.
+ *
+ * This is the first stage in the pipeline and populates `context.files`.
+ */
+import * as fs from 'node:fs';
+import * as crypto from 'node:crypto';
+import { setLoreMeta, getLoreMeta, LORE_META_INDEX_CHECKPOINT, } from '../db.js';
+import { walkFiles, detectLanguageForPath } from '../walker.js';
+import { ParserPool } from '../parser.js';
+import { buildStructuralEmbeddingText } from '../embedder.js';
+import { normalizeTypeName } from '../call-graph.js';
+import { CExtractor } from '../extractors/c.js';
+import { RustExtractor } from '../extractors/rust.js';
+import { PythonExtractor } from '../extractors/python.js';
+import { CppExtractor } from '../extractors/cpp.js';
+import { TypeScriptExtractor } from '../extractors/typescript.js';
+import { JavaScriptExtractor } from '../extractors/javascript.js';
+import { GoExtractor } from '../extractors/go.js';
+import { JavaExtractor } from '../extractors/java.js';
+import { CSharpExtractor } from '../extractors/csharp.js';
+import { RubyExtractor } from '../extractors/ruby.js';
+import { PhpExtractor } from '../extractors/php.js';
+import { SwiftExtractor } from '../extractors/swift.js';
+import { KotlinExtractor } from '../extractors/kotlin.js';
+import { ScalaExtractor } from '../extractors/scala.js';
+import { LuaExtractor } from '../extractors/lua.js';
+import { BashExtractor } from '../extractors/bash.js';
+import { ElixirExtractor } from '../extractors/elixir.js';
+import { ZigExtractor } from '../extractors/zig.js';
+import { DartExtractor } from '../extractors/dart.js';
+import { OcamlExtractor } from '../extractors/ocaml.js';
+import { HaskellExtractor } from '../extractors/haskell.js';
+import { JuliaExtractor } from '../extractors/julia.js';
+import { ElmExtractor } from '../extractors/elm.js';
+import { ObjcExtractor } from '../extractors/objc.js';
+// ─── Extractor registry ───────────────────────────────────────────────────────
+const EXTRACTORS = {
+    c: new CExtractor(),
+    rust: new RustExtractor(),
+    python: new PythonExtractor(),
+    cpp: new CppExtractor(),
+    typescript: new TypeScriptExtractor(),
+    javascript: new JavaScriptExtractor(),
+    go: new GoExtractor(),
+    java: new JavaExtractor(),
+    csharp: new CSharpExtractor(),
+    ruby: new RubyExtractor(),
+    php: new PhpExtractor(),
+    swift: new SwiftExtractor(),
+    kotlin: new KotlinExtractor(),
+    scala: new ScalaExtractor(),
+    lua: new LuaExtractor(),
+    bash: new BashExtractor(),
+    elixir: new ElixirExtractor(),
+    zig: new ZigExtractor(),
+    dart: new DartExtractor(),
+    ocaml: new OcamlExtractor(),
+    haskell: new HaskellExtractor(),
+    julia: new JuliaExtractor(),
+    elm: new ElmExtractor(),
+    objc: new ObjcExtractor(),
+};
+// ─── Stage ────────────────────────────────────────────────────────────────────
+/**
+ * Walk source files, parse with tree-sitter, extract symbols/imports/callRefs/
+ * typeRefs/relationships/routes/annotations, and persist to the database.
+ *
+ * Populates `context.files` for use by later stages.
+ */
+export class SourceIndexStage {
+    name = 'source-index';
+    pool = null;
+    async execute(context, mode) {
+        this.pool = new ParserPool();
+        // Save docs auto-notes setting.
+        setLoreMeta(context.db, 'docs_auto_notes', context.docsAutoNotes ? '1' : '0');
+        if (mode === 'build') {
+            const files = await walkFiles(context.walkerConfig);
+            context.files = files;
+            context.log.indexing('walk complete', { fileCount: files.length });
+            await this.processBuild(context, files);
+        }
+        else {
+            await this.processUpdate(context);
+        }
+    }
+    async dispose() {
+        this.pool = null;
+    }
+    // ─── Build mode ──────────────────────────────────────────────────────────
+    async processBuild(context, files) {
+        const { db, branch } = context;
+        const pool = this.pool;
+        const resumeAt = loadBuildCheckpoint(db, branch, context.walkerConfig.rootDir, files.length);
+        if (resumeAt > 0) {
+            context.log.indexing('resuming from checkpoint', { resumeAt, totalFiles: files.length });
+        }
+        db.transaction(() => {
+            for (let i = resumeAt; i < files.length; i++) {
+                const file = files[i];
+                if (!file)
+                    continue;
+                processFile(db, pool, file.path, file.language, branch);
+                saveBuildCheckpoint(db, branch, context.walkerConfig.rootDir, i + 1, files.length);
+            }
+        })();
+        saveBuildCheckpoint(db, branch, context.walkerConfig.rootDir, files.length, files.length);
+    }
+    // ─── Update mode ─────────────────────────────────────────────────────────
+    async processUpdate(context) {
+        const { db, branch, walkerConfig } = context;
+        const changedFiles = context.changedFiles ?? [];
+        const pool = this.pool;
+        const enrichedFiles = [];
+        db.transaction(() => {
+            for (const filePath of changedFiles) {
+                // If the file no longer exists, remove it from the DB
+                if (!fs.existsSync(filePath)) {
+                    const row = db.prepare('SELECT id FROM files WHERE path = ? AND branch = ?').get(filePath, branch);
+                    if (row) {
+                        const symRows = db.prepare('SELECT id FROM symbols WHERE file_id = ?').all(row.id);
+                        for (const s of symRows)
+                            context.staleSymbolIds.push(s.id);
+                        db.prepare('UPDATE file_imports SET resolved_id = NULL WHERE resolved_id = ?').run(row.id);
+                        db.prepare('DELETE FROM symbols_fts WHERE rowid IN (SELECT id FROM symbols WHERE file_id = ?)').run(row.id);
+                        db.prepare('DELETE FROM files WHERE id = ?').run(row.id);
+                    }
+                    continue;
+                }
+                const language = detectLanguageForPath(filePath, walkerConfig);
+                if (language) {
+                    enrichedFiles.push({ path: filePath, language });
+                    context.changedSourcePaths.push(filePath);
+                    const existingRow = db.prepare('SELECT id FROM files WHERE path = ? AND branch = ?').get(filePath, branch);
+                    if (existingRow) {
+                        const symRows = db.prepare('SELECT id FROM symbols WHERE file_id = ?').all(existingRow.id);
+                        for (const s of symRows)
+                            context.staleSymbolIds.push(s.id);
+                        db.prepare('UPDATE file_imports SET resolved_id = NULL WHERE resolved_id = ?').run(existingRow.id);
+                        db.prepare('UPDATE symbol_refs SET callee_id = NULL WHERE callee_id IN (SELECT id FROM symbols WHERE file_id = ?)').run(existingRow.id);
+                        db.prepare('UPDATE type_refs SET type_id = NULL WHERE type_id IN (SELECT id FROM symbols WHERE file_id = ?)').run(existingRow.id);
+                        db.prepare('UPDATE symbol_relationships SET target_symbol_id = NULL WHERE target_symbol_id IN (SELECT id FROM symbols WHERE file_id = ?)').run(existingRow.id);
+                        db.prepare('DELETE FROM symbols_fts WHERE rowid IN (SELECT id FROM symbols WHERE file_id = ?)').run(existingRow.id);
+                    }
+                    db.prepare('DELETE FROM files WHERE path = ? AND branch = ?').run(filePath, branch);
+                    processFile(db, pool, filePath, language, branch);
+                }
+            }
+        })();
+        // In update mode, context.files = only the changed/enriched files
+        context.files = enrichedFiles;
+    }
+}
+// ─── File processing (extracted from IndexBuilder.processFile) ────────────────
+/**
+ * Parse one file, extract symbols/imports/callRefs/typeRefs/relationships/
+ * routes/annotations, and insert into the DB.
+ */
+export function processFile(db, pool, filePath, language, branch) {
+    // P3: fast-path — check file size via stat before reading+hashing.
+    const existing = db.prepare('SELECT id, last_hash, size_bytes FROM files WHERE path = ? AND branch = ?').get(filePath, branch);
+    if (existing) {
+        try {
+            const stat = fs.statSync(filePath);
+            if (stat.size === existing.size_bytes && existing.last_hash !== null) {
+                // Size matches — read and hash to confirm.
+                let source;
+                try {
+                    source = fs.readFileSync(filePath, 'utf8');
+                }
+                catch {
+                    return;
+                }
+                const hash = crypto.createHash('sha256').update(source).digest('hex');
+                if (existing.last_hash === hash)
+                    return;
+                processFileWithSource(db, pool, filePath, language, branch, source, hash, existing);
+                return;
+            }
+        }
+        catch {
+            return;
+        }
+    }
+    let source;
+    try {
+        source = fs.readFileSync(filePath, 'utf8');
+    }
+    catch {
+        return;
+    }
+    const hash = crypto.createHash('sha256').update(source).digest('hex');
+    if (existing?.last_hash === hash)
+        return;
+    processFileWithSource(db, pool, filePath, language, branch, source, hash, existing);
+}
+/** Core file processing after source has been read and hashed. */
+function processFileWithSource(db, pool, filePath, language, branch, source, hash, existing) {
+    const sizeBytes = Buffer.byteLength(source, 'utf8');
+    // Upsert the file row
+    let fileId;
+    if (existing) {
+        db.prepare(`UPDATE files SET language = ?, size_bytes = ?, last_hash = ?, source = ?, indexed_at = unixepoch()
+        WHERE id = ?`).run(language, sizeBytes, hash, source, existing.id);
+        fileId = existing.id;
+        // Remove stale symbols / imports / external deps (also clean up FTS5 index)
+        db.prepare('DELETE FROM symbols_fts WHERE rowid IN (SELECT id FROM symbols WHERE file_id = ?)').run(fileId);
+        db.prepare('DELETE FROM symbol_relationships WHERE file_id = ?').run(fileId);
+        db.prepare('DELETE FROM type_refs WHERE file_id = ?').run(fileId);
+        // NULL out cross-file FK references that point to symbols in this file
+        db.prepare('UPDATE symbol_refs SET callee_id = NULL WHERE callee_id IN (SELECT id FROM symbols WHERE file_id = ?)').run(fileId);
+        db.prepare('UPDATE type_refs SET type_id = NULL WHERE type_id IN (SELECT id FROM symbols WHERE file_id = ?)').run(fileId);
+        db.prepare('UPDATE symbol_relationships SET target_symbol_id = NULL WHERE target_symbol_id IN (SELECT id FROM symbols WHERE file_id = ?)').run(fileId);
+        db.prepare('DELETE FROM symbols WHERE file_id = ?').run(fileId);
+        db.prepare('DELETE FROM file_imports WHERE file_id = ?').run(fileId);
+        db.prepare('DELETE FROM external_deps WHERE file_id = ?').run(fileId);
+        db.prepare('DELETE FROM api_routes WHERE file_id = ?').run(fileId);
+        db.prepare('DELETE FROM annotations WHERE file_id = ?').run(fileId);
+    }
+    else {
+        const info = db
+            .prepare(`INSERT INTO files (path, branch, language, size_bytes, last_hash, source)
+         VALUES (?, ?, ?, ?, ?, ?)`)
+            .run(filePath, branch, language, sizeBytes, hash, source);
+        fileId = Number(info.lastInsertRowid);
+    }
+    // Parse the source
+    const tree = pool.parse(language, source);
+    if (!tree)
+        return;
+    const extractor = EXTRACTORS[language];
+    if (!extractor)
+        return;
+    const result = extractor.extract(tree, source, filePath);
+    // Insert symbols and keep FTS5 index in sync
+    const insertSymbol = db.prepare(`INSERT INTO symbols (file_id, name, kind, start_line, end_line, signature, doc_comment)
+     VALUES (?, ?, ?, ?, ?, ?, ?)`);
+    const insertFts = db.prepare('INSERT INTO symbols_fts(rowid, name, signature, kind) VALUES (?, ?, ?, ?)');
+    const symbolIdMap = new Map();
+    for (const sym of result.symbols) {
+        const info = insertSymbol.run(fileId, sym.name, sym.kind, sym.startLine, sym.endLine, sym.signature ?? null, sym.docComment ?? null);
+        const symId = Number(info.lastInsertRowid);
+        symbolIdMap.set(sym.name, symId);
+        insertFts.run(symId, sym.name, buildStructuralEmbeddingText({
+            name: sym.name,
+            signature: sym.signature ?? null,
+        }), sym.kind);
+    }
+    // Insert API routes
+    const insertRoute = db.prepare(`INSERT INTO api_routes (file_id, method, path, handler_id, handler_name, framework, line, middleware)
+     VALUES (?, ?, ?, ?, ?, ?, ?, ?)`);
+    for (const route of result.routes) {
+        insertRoute.run(fileId, route.method, route.path, symbolIdMap.get(route.handler) ?? null, route.handler, route.framework, route.line, route.middleware ? JSON.stringify(route.middleware) : null);
+    }
+    // Insert raw imports
+    const insertImport = db.prepare('INSERT INTO file_imports (file_id, raw_import) VALUES (?, ?)');
+    for (const imp of result.imports) {
+        insertImport.run(fileId, imp.source);
+    }
+    // Insert call refs
+    const insertCallRef = db.prepare(`INSERT INTO symbol_refs (caller_id, file_id, callee_name, call_line, call_character, call_kind)
+     VALUES (?, ?, ?, ?, ?, ?)`);
+    for (const ref of result.callRefs) {
+        const callerId = symbolIdMap.get(ref.callerSymbol);
+        if (callerId !== undefined) {
+            insertCallRef.run(callerId, fileId, ref.calleeRaw, ref.line, ref.character ?? null, ref.callKind ?? 'direct');
+        }
+    }
+    // Insert relationships
+    const insertRelationship = db.prepare(`INSERT INTO symbol_relationships (file_id, source_symbol_id, target_symbol_name, relationship_type, line, character)
+     VALUES (?, ?, ?, ?, ?, ?)`);
+    for (const rel of result.relationships) {
+        const sourceId = symbolIdMap.get(rel.fromSymbol) ?? null;
+        insertRelationship.run(fileId, sourceId, rel.toSymbol, rel.kind, rel.line, rel.character ?? null);
+    }
+    // Insert type refs
+    const insertTypeRef = db.prepare(`INSERT INTO type_refs (file_id, symbol_id, type_name, type_name_bare, ref_kind, ref_line, ref_character)
+     VALUES (?, ?, ?, ?, ?, ?, ?)`);
+    for (const ref of result.typeRefs) {
+        const symId = symbolIdMap.get(ref.enclosingSymbol) ?? null;
+        insertTypeRef.run(fileId, symId, ref.typeRaw, normalizeTypeName(ref.typeRaw), ref.refKind, ref.line, ref.character ?? null);
+    }
+}
+// ─── Checkpoint helpers ───────────────────────────────────────────────────────
+function loadBuildCheckpoint(db, branch, rootDir, totalFiles) {
+    const raw = getLoreMeta(db, LORE_META_INDEX_CHECKPOINT);
+    if (!raw)
+        return 0;
+    try {
+        const parsed = JSON.parse(raw);
+        if (parsed.branch !== branch || parsed.rootDir !== rootDir)
+            return 0;
+        const nextFileIndex = parsed.nextFileIndex ?? 0;
+        return Math.max(0, Math.min(totalFiles, nextFileIndex));
+    }
+    catch {
+        return 0;
+    }
+}
+function saveBuildCheckpoint(db, branch, rootDir, nextFileIndex, totalFiles) {
+    const checkpoint = {
+        branch,
+        rootDir,
+        totalFiles,
+        nextFileIndex,
+        updatedAt: Math.floor(Date.now() / 1000),
+    };
+    setLoreMeta(db, LORE_META_INDEX_CHECKPOINT, JSON.stringify(checkpoint));
+}
+//# sourceMappingURL=source-index.js.map

package/dist/indexer/stages/source-index.js.map

@@ -0,0 +1 @@
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package/dist/lore-server/db.d.ts

@@ -134,10 +134,56 @@ export interface FileRow {
 export declare function getFileById(db: Database.Database, id: number, branch?: string): FileRow | undefined;
 /** Fetch a single file row by its path. */
 export declare function getFileByPath(db: Database.Database, path: string, branch?: string): FileRow | undefined;
-/** Return all indexed files, optionally limited to `limit` rows. */
+/**
+ * Return all indexed files, optionally filtered and paginated.
+ *
+ * By default no row limit is applied — consumers receive the full file list
+ * without needing to know about an internal pagination ceiling.  Pass an
+ * explicit `limit` to cap the result set.
+ */
 export declare function listFiles(db: Database.Database, limit?: number, branch?: string): FileRow[];
 /** Return indexed files matching an exact path or directory prefix. */
 export declare function listFilesByPathPrefix(db: Database.Database, pathPrefix: string, branch?: string, limit?: number): FileRow[];
+export interface ResolvedEdge {
+    ref_id: number;
+    caller_id: number;
+    caller_name: string;
+    caller_kind: string;
+    caller_file_id: number;
+    caller_file_path: string;
+    callee_id: number | null;
+    callee_name: string;
+    callee_kind: string | null;
+    callee_file_id: number | null;
+    callee_file_path: string | null;
+    call_line: number;
+    call_character: number | null;
+    call_kind: string;
+    resolution_method: string;
+}
+export interface ListResolvedEdgesOptions {
+    /** Only include edges where `callee_id` is resolved (non-NULL). Default: false. */
+    resolvedOnly?: boolean;
+    /** Restrict to edges whose caller belongs to this file. */
+    fileId?: number;
+    /** Filter by caller branch. */
+    branch?: string;
+    /** Maximum rows to return. Default: 100 000. */
+    limit?: number;
+}
+/**
+ * Returns pre-resolved call-graph edges from `symbol_refs`, joining through
+ * `symbols` and `files` to denormalize caller/callee metadata.
+ *
+ * Consumers get a ready-to-use edge list without needing to re-resolve
+ * `callee_name` by hand.  The query:
+ *
+ *  - Prefers `callee_id` when populated (LSP-resolved or name-resolved)
+ *  - Includes `resolution_method` so callers can filter by confidence
+ *  - Optionally restricts to a single file (file-scoped queries)
+ *  - Defaults to a high limit (100 000) to avoid silent truncation
+ */
+export declare function listResolvedEdges(db: Database.Database, options?: ListResolvedEdgesOptions): ResolvedEdge[];
 export interface DocRow {
     id: number;
     path: string;
@@ -227,10 +273,11 @@ export interface ListConfigEntriesArgs {
     kind?: string;
 }
 /**
- * Return config entries joined with their config-file metadata and usage references.
- * Results are ordered deterministically by key and file path.
+ * @removed No DDL exists for `config_entries` or `config_entry_refs`.
+ * Always returns an empty array. Retained as a stub to avoid breaking
+ * downstream imports during migration.
  */
-export declare function listConfigEntries(db: Database.Database, args?: ListConfigEntriesArgs): ConfigEntryRow[];
+export declare function listConfigEntries(_db: Database.Database, _args?: ListConfigEntriesArgs): ConfigEntryRow[];
 export interface AnnotationRow {
     file_path: string;
     line: number;

package/dist/lore-server/db.d.ts.map

@@ -1 +1 @@
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package/dist/lore-server/db.js

@@ -283,12 +283,22 @@ export function getFileByPath(db, path, branch) {
     }
     return db.prepare('SELECT * FROM files WHERE path = ?').get(path);
 }
-/** Return all indexed files, optionally limited to `limit` rows. */
-export function listFiles(db, limit = 100, branch) {
+/**
+ * Return all indexed files, optionally filtered and paginated.
+ *
+ * By default no row limit is applied — consumers receive the full file list
+ * without needing to know about an internal pagination ceiling.  Pass an
+ * explicit `limit` to cap the result set.
+ */
+export function listFiles(db, limit, branch) {
     if (branch !== undefined) {
-        return db.prepare('SELECT * FROM files WHERE branch = ? LIMIT ?').all(branch, limit);
+        return limit !== undefined
+            ? db.prepare('SELECT * FROM files WHERE branch = ? LIMIT ?').all(branch, limit)
+            : db.prepare('SELECT * FROM files WHERE branch = ?').all(branch);
     }
-    return db.prepare('SELECT * FROM files LIMIT ?').all(limit);
+    return limit !== undefined
+        ? db.prepare('SELECT * FROM files LIMIT ?').all(limit)
+        : db.prepare('SELECT * FROM files').all();
 }
 /** Return indexed files matching an exact path or directory prefix. */
 export function listFilesByPathPrefix(db, pathPrefix, branch, limit = 1000) {
@@ -312,6 +322,61 @@ export function listFilesByPathPrefix(db, pathPrefix, branch, limit = 1000) {
        LIMIT ?`)
         .all(normalized, likePattern, limit);
 }
+/**
+ * Returns pre-resolved call-graph edges from `symbol_refs`, joining through
+ * `symbols` and `files` to denormalize caller/callee metadata.
+ *
+ * Consumers get a ready-to-use edge list without needing to re-resolve
+ * `callee_name` by hand.  The query:
+ *
+ *  - Prefers `callee_id` when populated (LSP-resolved or name-resolved)
+ *  - Includes `resolution_method` so callers can filter by confidence
+ *  - Optionally restricts to a single file (file-scoped queries)
+ *  - Defaults to a high limit (100 000) to avoid silent truncation
+ */
+export function listResolvedEdges(db, options = {}) {
+    const where = [];
+    const params = [];
+    if (options.resolvedOnly) {
+        where.push('sr.callee_id IS NOT NULL');
+    }
+    if (options.fileId !== undefined) {
+        where.push('sr.file_id = ?');
+        params.push(options.fileId);
+    }
+    if (options.branch !== undefined) {
+        where.push('f_caller.branch = ?');
+        params.push(options.branch);
+    }
+    const limit = options.limit ?? 100_000;
+    params.push(limit);
+    const whereClause = where.length > 0 ? `WHERE ${where.join(' AND ')}` : '';
+    return db
+        .prepare(`SELECT sr.id          AS ref_id,
+              sr.caller_id,
+              s_caller.name  AS caller_name,
+              s_caller.kind  AS caller_kind,
+              s_caller.file_id AS caller_file_id,
+              f_caller.path  AS caller_file_path,
+              sr.callee_id,
+              sr.callee_name,
+              s_callee.kind  AS callee_kind,
+              s_callee.file_id AS callee_file_id,
+              f_callee.path  AS callee_file_path,
+              sr.call_line,
+              sr.call_character,
+              sr.call_kind,
+              sr.resolution_method
+         FROM symbol_refs sr
+         JOIN symbols s_caller  ON s_caller.id = sr.caller_id
+         JOIN files   f_caller  ON f_caller.id = s_caller.file_id
+         LEFT JOIN symbols s_callee ON s_callee.id = sr.callee_id
+         LEFT JOIN files   f_callee ON f_callee.id = s_callee.file_id
+         ${whereClause}
+         ORDER BY sr.caller_id ASC, sr.call_line ASC
+         LIMIT ?`)
+        .all(...params);
+}
 function normalizeDocKinds(kind, kinds) {
     const merged = [
         ...(kind ? [kind] : []),
@@ -517,72 +582,12 @@ export function listTestMappingsBySourcePath(db, sourcePath, branch) {
         .all(sourcePath);
 }
 /**
- * Return config entries joined with their config-file metadata and usage references.
- * Results are ordered deterministically by key and file path.
+ * @removed No DDL exists for `config_entries` or `config_entry_refs`.
+ * Always returns an empty array. Retained as a stub to avoid breaking
+ * downstream imports during migration.
  */
-export function listConfigEntries(db, args = {}) {
-    const where = [];
-    const params = [];
-    if (args.key !== undefined) {
-        where.push('ce.key = ?');
-        params.push(args.key);
-    }
-    if (args.filePath !== undefined) {
-        where.push('f.path = ?');
-        params.push(args.filePath);
-    }
-    if (args.kind !== undefined) {
-        where.push('ce.kind = ?');
-        params.push(args.kind);
-    }
-    const whereSql = where.length > 0 ? `WHERE ${where.join(' AND ')}` : '';
-    try {
-        const entries = db
-            .prepare(`SELECT
-           ce.id,
-           ce.file_id,
-           ce.key,
-           ce.value,
-           ce.default_value,
-           ce.inferred_type,
-           ce.required,
-           ce.description,
-           ce.kind,
-           f.path AS file_path,
-           f.branch AS file_branch
-         FROM config_entries ce
-         JOIN files f ON f.id = ce.file_id
-         ${whereSql}
-         ORDER BY ce.key COLLATE NOCASE ASC, f.path ASC, ce.id ASC`)
-            .all(...params);
-        if (entries.length === 0)
-            return [];
-        const placeholders = entries.map(() => '?').join(', ');
-        const refs = db
-            .prepare(`SELECT
-           cer.config_entry_id,
-           cer.line,
-           f.path,
-           f.branch
-         FROM config_entry_refs cer
-         JOIN files f ON f.id = cer.file_id
-         WHERE cer.config_entry_id IN (${placeholders})
-         ORDER BY cer.config_entry_id ASC, f.path ASC, cer.line ASC`)
-            .all(...entries.map((entry) => entry.id));
-        const refsByEntryId = new Map();
-        for (const ref of refs) {
-            const current = refsByEntryId.get(ref.config_entry_id) ?? [];
-            current.push({ path: ref.path, branch: ref.branch, line: ref.line });
-            refsByEntryId.set(ref.config_entry_id, current);
-        }
-        return entries.map((entry) => ({
-            ...entry,
-            references: refsByEntryId.get(entry.id) ?? [],
-        }));
-    }
-    catch {
-        return [];
-    }
+export function listConfigEntries(_db, _args = {}) {
+    return [];
 }
 /** Return annotations filtered by kind, with optional path filter and row limit. */
 export function listAnnotations(db, kind, path, limit = 20) {