@gzoo/cortex 0.5.9

package/packages/llm/dist/router.js.map

@@ -0,0 +1 @@
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package/packages/llm/dist/token-tracker.d.ts

@@ -0,0 +1,24 @@
+import { type LLMTask, type TokenUsageRecord } from '@cortex/core';
+export declare function estimateCost(model: string, inputTokens: number, outputTokens: number): number;
+export declare class TokenTracker {
+    private records;
+    private monthlyBudgetUsd;
+    private warningThresholds;
+    private warningsFired;
+    constructor(monthlyBudgetUsd?: number, warningThresholds?: number[]);
+    record(requestId: string, task: LLMTask, provider: string, model: string, inputTokens: number, outputTokens: number, latencyMs: number): TokenUsageRecord;
+    private checkBudget;
+    getCurrentMonthSpend(): number;
+    isBudgetExhausted(): boolean;
+    getBudgetRemaining(): number;
+    getRecords(): TokenUsageRecord[];
+    getSummary(): {
+        totalCostUsd: number;
+        totalInputTokens: number;
+        totalOutputTokens: number;
+        requestCount: number;
+        costByTask: Record<string, number>;
+        costByProvider: Record<string, number>;
+    };
+}
+//# sourceMappingURL=token-tracker.d.ts.map

package/packages/llm/dist/token-tracker.d.ts.map

@@ -0,0 +1 @@
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package/packages/llm/dist/token-tracker.js

@@ -0,0 +1,114 @@
+import { createLogger, eventBus } from '@cortex/core';
+const logger = createLogger('llm:token-tracker');
+// Cost per million tokens (USD) for Anthropic models
+const MODEL_COSTS = {
+    'claude-sonnet-4-5-20250929': { input: 3.0, output: 15.0 },
+    'claude-haiku-4-5-20251001': { input: 0.80, output: 4.0 },
+};
+const DEFAULT_COST = { input: 3.0, output: 15.0 };
+export function estimateCost(model, inputTokens, outputTokens) {
+    const costs = MODEL_COSTS[model] ?? DEFAULT_COST;
+    return ((inputTokens / 1_000_000) * costs.input +
+        (outputTokens / 1_000_000) * costs.output);
+}
+export class TokenTracker {
+    records = [];
+    monthlyBudgetUsd;
+    warningThresholds;
+    warningsFired = new Set();
+    constructor(monthlyBudgetUsd = 25, warningThresholds = [0.5, 0.8, 0.9]) {
+        this.monthlyBudgetUsd = monthlyBudgetUsd;
+        this.warningThresholds = warningThresholds;
+    }
+    record(requestId, task, provider, model, inputTokens, outputTokens, latencyMs) {
+        const costUsd = estimateCost(model, inputTokens, outputTokens);
+        const record = {
+            id: crypto.randomUUID(),
+            requestId,
+            task,
+            provider,
+            model,
+            inputTokens,
+            outputTokens,
+            estimatedCostUsd: costUsd,
+            latencyMs,
+            timestamp: new Date().toISOString(),
+        };
+        this.records.push(record);
+        this.checkBudget();
+        return record;
+    }
+    checkBudget() {
+        const spent = this.getCurrentMonthSpend();
+        const usedPercent = this.monthlyBudgetUsd > 0 ? spent / this.monthlyBudgetUsd : 0;
+        const ts = new Date().toISOString();
+        for (const threshold of this.warningThresholds) {
+            if (usedPercent >= threshold && !this.warningsFired.has(threshold)) {
+                this.warningsFired.add(threshold);
+                const remaining = this.monthlyBudgetUsd - spent;
+                logger.warn(`Budget warning: ${(usedPercent * 100).toFixed(1)}% used`, {
+                    spent,
+                    budget: this.monthlyBudgetUsd,
+                    remaining,
+                });
+                eventBus.emit({
+                    type: 'budget.warning',
+                    payload: { usedPercent: Math.round(usedPercent * 100), remainingUsd: remaining },
+                    timestamp: ts,
+                    source: 'llm:token-tracker',
+                });
+            }
+        }
+        // Emit exhausted event once when budget is fully consumed
+        if (this.monthlyBudgetUsd > 0 && usedPercent >= 1.0 && !this.warningsFired.has(1.0)) {
+            this.warningsFired.add(1.0);
+            logger.warn('Budget exhausted', { spent, budget: this.monthlyBudgetUsd });
+            eventBus.emit({
+                type: 'budget.exhausted',
+                payload: { totalSpentUsd: spent },
+                timestamp: ts,
+                source: 'llm:token-tracker',
+            });
+        }
+    }
+    getCurrentMonthSpend() {
+        const currentMonth = new Date().toISOString().slice(0, 7);
+        return this.records
+            .filter((r) => r.timestamp.startsWith(currentMonth))
+            .reduce((sum, r) => sum + r.estimatedCostUsd, 0);
+    }
+    isBudgetExhausted() {
+        return this.getCurrentMonthSpend() >= this.monthlyBudgetUsd;
+    }
+    getBudgetRemaining() {
+        return Math.max(0, this.monthlyBudgetUsd - this.getCurrentMonthSpend());
+    }
+    getRecords() {
+        return [...this.records];
+    }
+    getSummary() {
+        const currentMonth = new Date().toISOString().slice(0, 7);
+        const monthRecords = this.records.filter((r) => r.timestamp.startsWith(currentMonth));
+        const costByTask = {};
+        const costByProvider = {};
+        let totalInput = 0;
+        let totalOutput = 0;
+        let totalCost = 0;
+        for (const r of monthRecords) {
+            totalInput += r.inputTokens;
+            totalOutput += r.outputTokens;
+            totalCost += r.estimatedCostUsd;
+            costByTask[r.task] = (costByTask[r.task] ?? 0) + r.estimatedCostUsd;
+            costByProvider[r.provider] = (costByProvider[r.provider] ?? 0) + r.estimatedCostUsd;
+        }
+        return {
+            totalCostUsd: totalCost,
+            totalInputTokens: totalInput,
+            totalOutputTokens: totalOutput,
+            requestCount: monthRecords.length,
+            costByTask,
+            costByProvider,
+        };
+    }
+}
+//# sourceMappingURL=token-tracker.js.map

package/packages/llm/dist/token-tracker.js.map

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package/packages/llm/package.json

@@ -0,0 +1,25 @@
+{
+  "name": "@cortex/llm",
+  "version": "0.1.0",
+  "private": true,
+  "type": "module",
+  "main": "dist/index.js",
+  "types": "dist/index.d.ts",
+  "exports": {
+    ".": {
+      "types": "./dist/index.d.ts",
+      "import": "./dist/index.js"
+    }
+  },
+  "scripts": {
+    "build": "tsc --build",
+    "dev": "tsc --build --watch",
+    "test": "echo \"No tests yet\""
+  },
+  "dependencies": {
+    "@anthropic-ai/sdk": "^0.78.0",
+    "@cortex/core": "*",
+    "openai": "^4.0.0",
+    "zod": "^3.25.76"
+  }
+}

package/packages/llm/tsconfig.json

@@ -0,0 +1,12 @@
+{
+  "extends": "../../tsconfig.base.json",
+  "compilerOptions": {
+    "outDir": "dist",
+    "rootDir": "src",
+    "composite": true
+  },
+  "include": ["src/**/*.ts"],
+  "references": [
+    { "path": "../core" }
+  ]
+}

package/packages/mcp/dist/index.d.ts

@@ -0,0 +1,10 @@
+#!/usr/bin/env node
+/**
+ * GZOO Cortex MCP Server — stdio transport
+ *
+ * IMPORTANT: stdout belongs to the JSON-RPC transport.
+ * Setting CORTEX_LOG_LEVEL=error before any imports causes createLogger()
+ * to default to 'error' level, so info/debug never reach stdout.
+ */
+export {};
+//# sourceMappingURL=index.d.ts.map

package/packages/mcp/dist/index.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":";AACA;;;;;;GAMG"}

package/packages/mcp/dist/index.js

@@ -0,0 +1,33 @@
+#!/usr/bin/env node
+/**
+ * GZOO Cortex MCP Server — stdio transport
+ *
+ * IMPORTANT: stdout belongs to the JSON-RPC transport.
+ * Setting CORTEX_LOG_LEVEL=error before any imports causes createLogger()
+ * to default to 'error' level, so info/debug never reach stdout.
+ */
+// Must be set before any @cortex/* imports that create Logger instances
+if (!process.env['CORTEX_LOG_LEVEL']) {
+    process.env['CORTEX_LOG_LEVEL'] = 'error';
+}
+import { StdioServerTransport } from '@modelcontextprotocol/sdk/server/stdio.js';
+import { loadConfig } from '@cortex/core';
+import { Router } from '@cortex/llm';
+import { createStoreBundle } from './store-factory.js';
+import { createCortexMcpServer } from './server.js';
+async function main() {
+    const configDir = process.env['CORTEX_CONFIG_DIR'];
+    const config = loadConfig({ configDir });
+    const bundle = await createStoreBundle(configDir);
+    const router = new Router({ config });
+    const server = createCortexMcpServer(bundle, router);
+    const transport = new StdioServerTransport();
+    process.on('SIGINT', () => { bundle.cleanup(); process.exit(0); });
+    process.on('SIGTERM', () => { bundle.cleanup(); process.exit(0); });
+    await server.connect(transport);
+}
+main().catch((err) => {
+    process.stderr.write(`[cortex-mcp] Fatal: ${err instanceof Error ? err.message : String(err)}\n`);
+    process.exit(1);
+});
+//# sourceMappingURL=index.js.map

package/packages/mcp/dist/index.js.map

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package/packages/mcp/dist/server.d.ts

@@ -0,0 +1,5 @@
+import { McpServer } from '@modelcontextprotocol/sdk/server/mcp.js';
+import type { StoreBundle } from './store-factory.js';
+import type { Router } from '@cortex/llm';
+export declare function createCortexMcpServer(bundle: StoreBundle, router: Router): McpServer;
+//# sourceMappingURL=server.d.ts.map

package/packages/mcp/dist/server.d.ts.map

@@ -0,0 +1 @@
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package/packages/mcp/dist/server.js

@@ -0,0 +1,87 @@
+import { McpServer } from '@modelcontextprotocol/sdk/server/mcp.js';
+import { z } from 'zod';
+import { handleQueryCortex } from './tools/query.js';
+import { handleFindEntity } from './tools/find.js';
+import { handleListProjects } from './tools/projects.js';
+import { handleGetStatus } from './tools/status.js';
+import { handleGetContradictions, handleResolveContradiction } from './tools/contradictions.js';
+export function createCortexMcpServer(bundle, router) {
+    const server = new McpServer({
+        name: 'cortex',
+        version: '0.1.0',
+    });
+    server.registerTool('get_status', {
+        title: 'Get Cortex Status',
+        description: 'Get current status of the Cortex knowledge graph: entity count, relationship count, ' +
+            'file count, and whether the graph has data. Check this first to verify Cortex is populated.',
+    }, async () => {
+        const result = await handleGetStatus(bundle.store);
+        return { content: [{ type: 'text', text: JSON.stringify(result, null, 2) }] };
+    });
+    server.registerTool('list_projects', {
+        title: 'List Cortex Projects',
+        description: 'List all projects registered in Cortex with their file and entity counts. ' +
+            'Use the project id to scope query_cortex to a specific project.',
+    }, async () => {
+        const result = await handleListProjects(bundle.store);
+        return { content: [{ type: 'text', text: JSON.stringify(result, null, 2) }] };
+    });
+    server.registerTool('find_entity', {
+        title: 'Find Entity',
+        description: 'Look up a specific entity by name or UUID in the Cortex knowledge graph. ' +
+            'Returns entity details and optionally its relationships to other entities. ' +
+            'Use this for precise lookups: decisions, patterns, components, dependencies.',
+        inputSchema: {
+            name: z.string().describe('Entity name (fuzzy matched) or exact UUID'),
+            expand: z.boolean().optional().describe('Include all relationships with neighbor entity names (default: false)'),
+            type: z.string().optional().describe('Filter by entity type: Decision, Requirement, Pattern, Component, ' +
+                'Dependency, Interface, Constraint, ActionItem, Risk, Note'),
+        },
+    }, async ({ name, expand, type }) => {
+        const result = await handleFindEntity({ name, expand: expand ?? false, type }, bundle.store);
+        return { content: [{ type: 'text', text: JSON.stringify(result, null, 2) }] };
+    });
+    server.registerTool('query_cortex', {
+        title: 'Query Cortex Knowledge Graph',
+        description: 'Answer a natural language question using the Cortex knowledge graph. ' +
+            'Returns an LLM-generated answer with cited entities. ' +
+            'Use this to understand decisions, architectural choices, patterns, and ' +
+            'dependencies across watched projects.',
+        inputSchema: {
+            question: z.string().describe('The natural language question to answer'),
+            projectId: z.string().optional().describe('Scope context to a specific project. Get IDs from list_projects.'),
+        },
+    }, async ({ question, projectId }) => {
+        const result = await handleQueryCortex({ question, projectId }, bundle.queryEngine, router, bundle.store);
+        return { content: [{ type: 'text', text: JSON.stringify(result, null, 2) }] };
+    });
+    server.registerTool('get_contradictions', {
+        title: 'Get Contradictions',
+        description: 'List contradictions detected in the knowledge graph. Contradictions occur when ' +
+            'two entities make conflicting claims (e.g., different tech choices for the same thing). ' +
+            'Returns both entities with summaries so you can understand and help resolve them.',
+        inputSchema: {
+            status: z.string().optional().describe('Filter by status: active, resolved, or dismissed (default: all)'),
+            limit: z.number().optional().describe('Max results to return (default: 50)'),
+        },
+    }, async ({ status, limit }) => {
+        const result = await handleGetContradictions({ status, limit }, bundle.store);
+        return { content: [{ type: 'text', text: result }] };
+    });
+    server.registerTool('resolve_contradiction', {
+        title: 'Resolve Contradiction',
+        description: 'Resolve a contradiction by choosing an action: ' +
+            'supersede (entity A replaces B), keep_old (keep B, discard A), ' +
+            'dismiss (not a real contradiction), both_valid (both are correct in context). ' +
+            'Get contradiction IDs from get_contradictions first.',
+        inputSchema: {
+            id: z.string().describe('The contradiction ID to resolve'),
+            action: z.string().describe('Resolution action: supersede, keep_old, dismiss, or both_valid'),
+        },
+    }, async ({ id, action }) => {
+        const result = await handleResolveContradiction({ id, action }, bundle.store);
+        return { content: [{ type: 'text', text: result }] };
+    });
+    return server;
+}
+//# sourceMappingURL=server.js.map

package/packages/mcp/dist/server.js.map

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package/packages/mcp/dist/store-factory.d.ts

@@ -0,0 +1,8 @@
+import { SQLiteStore, QueryEngine } from '@cortex/graph';
+export interface StoreBundle {
+    store: SQLiteStore;
+    queryEngine: QueryEngine;
+    cleanup: () => void;
+}
+export declare function createStoreBundle(configDir?: string): Promise<StoreBundle>;
+//# sourceMappingURL=store-factory.d.ts.map

package/packages/mcp/dist/store-factory.d.ts.map

@@ -0,0 +1 @@
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package/packages/mcp/dist/store-factory.js

@@ -0,0 +1,24 @@
+import { loadConfig } from '@cortex/core';
+import { SQLiteStore, VectorStore, QueryEngine } from '@cortex/graph';
+export async function createStoreBundle(configDir) {
+    const config = loadConfig({ configDir });
+    const store = new SQLiteStore({
+        dbPath: config.graph.dbPath,
+        walMode: config.graph.walMode,
+        backupOnStartup: false, // never backup on MCP startup — adds latency, not needed
+    });
+    const vectorStore = new VectorStore({
+        dbPath: config.graph.vectorDbPath,
+    });
+    await vectorStore.initialize();
+    const queryEngine = new QueryEngine(store, vectorStore, {
+        maxContextTokens: config.llm.maxContextTokens,
+        maxResultEntities: 10, // keep LLM context small for fast MCP responses
+    });
+    return {
+        store,
+        queryEngine,
+        cleanup: () => store.close(),
+    };
+}
+//# sourceMappingURL=store-factory.js.map

package/packages/mcp/dist/store-factory.js.map

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package/packages/mcp/dist/tools/contradictions.d.ts

@@ -0,0 +1,14 @@
+import type { SQLiteStore } from '@cortex/graph';
+interface GetContradictionsInput {
+    status?: string;
+    entityId?: string;
+    limit?: number;
+}
+interface ResolveContradictionInput {
+    id: string;
+    action: string;
+}
+export declare function handleGetContradictions(input: GetContradictionsInput, store: SQLiteStore): Promise<string>;
+export declare function handleResolveContradiction(input: ResolveContradictionInput, store: SQLiteStore): Promise<string>;
+export {};
+//# sourceMappingURL=contradictions.d.ts.map

package/packages/mcp/dist/tools/contradictions.d.ts.map

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package/packages/mcp/dist/tools/contradictions.js

@@ -0,0 +1,33 @@
+export async function handleGetContradictions(input, store) {
+    const contradictions = await store.findContradictions({
+        status: input.status,
+        entityId: input.entityId,
+        limit: input.limit ?? 50,
+    });
+    const enriched = await Promise.all(contradictions.map(async (c) => {
+        const [entityA, entityB] = await Promise.all([
+            store.getEntity(c.entityIds[0]).catch(() => null),
+            store.getEntity(c.entityIds[1]).catch(() => null),
+        ]);
+        return {
+            ...c,
+            entityA: entityA ? { id: entityA.id, name: entityA.name, type: entityA.type, summary: entityA.summary } : null,
+            entityB: entityB ? { id: entityB.id, name: entityB.name, type: entityB.type, summary: entityB.summary } : null,
+        };
+    }));
+    return JSON.stringify({ count: enriched.length, contradictions: enriched }, null, 2);
+}
+export async function handleResolveContradiction(input, store) {
+    const validActions = ['supersede', 'dismiss', 'keep_old', 'both_valid'];
+    if (!validActions.includes(input.action)) {
+        return JSON.stringify({ error: `Invalid action. Must be one of: ${validActions.join(', ')}` });
+    }
+    const status = input.action === 'dismiss' ? 'dismissed' : 'resolved';
+    await store.updateContradiction(input.id, {
+        status: status,
+        resolvedAction: input.action,
+        resolvedAt: new Date().toISOString(),
+    });
+    return JSON.stringify({ success: true, id: input.id, action: input.action, status });
+}
+//# sourceMappingURL=contradictions.js.map

package/packages/mcp/dist/tools/contradictions.js.map

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package/packages/mcp/dist/tools/find.d.ts

@@ -0,0 +1,37 @@
+import type { SQLiteStore } from '@cortex/graph';
+export interface FindEntityInput {
+    name: string;
+    expand?: boolean;
+    type?: string;
+}
+interface EntityMatch {
+    id: string;
+    type: string;
+    name: string;
+    summary?: string;
+    content: string;
+    sourceFile: string;
+    sourceRange?: {
+        startLine: number;
+        endLine: number;
+    };
+    confidence: number;
+    tags: string[];
+    createdAt: string;
+    relationships: Array<{
+        id: string;
+        type: string;
+        direction: 'outgoing' | 'incoming';
+        otherEntityId: string;
+        otherEntityName?: string;
+        description?: string;
+        confidence: number;
+    }>;
+}
+export interface FindEntityResult {
+    found: boolean;
+    matches: EntityMatch[];
+}
+export declare function handleFindEntity(input: FindEntityInput, store: SQLiteStore): Promise<FindEntityResult>;
+export {};
+//# sourceMappingURL=find.d.ts.map

package/packages/mcp/dist/tools/find.d.ts.map

@@ -0,0 +1 @@
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package/packages/mcp/dist/tools/find.js

@@ -0,0 +1,52 @@
+export async function handleFindEntity(input, store) {
+    // Try exact ID lookup first, then full-text search
+    let entities = [];
+    const byId = await store.getEntity(input.name);
+    if (byId) {
+        entities = [byId];
+    }
+    else {
+        const results = await store.searchEntities(input.name, 20);
+        entities = input.type
+            ? results.filter((e) => e.type === input.type)
+            : results;
+    }
+    if (entities.length === 0) {
+        return { found: false, matches: [] };
+    }
+    const matches = await Promise.all(entities.map(async (entity) => {
+        let relationships = [];
+        if (input.expand) {
+            const rels = await store.getRelationshipsForEntity(entity.id, 'both');
+            relationships = await Promise.all(rels.map(async (rel) => {
+                const isOutgoing = rel.sourceEntityId === entity.id;
+                const otherId = isOutgoing ? rel.targetEntityId : rel.sourceEntityId;
+                const other = await store.getEntity(otherId);
+                return {
+                    id: rel.id,
+                    type: rel.type,
+                    direction: (isOutgoing ? 'outgoing' : 'incoming'),
+                    otherEntityId: otherId,
+                    otherEntityName: other?.name,
+                    description: rel.description,
+                    confidence: rel.confidence,
+                };
+            }));
+        }
+        return {
+            id: entity.id,
+            type: entity.type,
+            name: entity.name,
+            summary: entity.summary,
+            content: entity.content,
+            sourceFile: entity.sourceFile,
+            sourceRange: entity.sourceRange,
+            confidence: entity.confidence,
+            tags: entity.tags,
+            createdAt: entity.createdAt,
+            relationships,
+        };
+    }));
+    return { found: true, matches };
+}
+//# sourceMappingURL=find.js.map

package/packages/mcp/dist/tools/find.js.map

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package/packages/mcp/dist/tools/projects.d.ts

@@ -0,0 +1,16 @@
+import type { SQLiteStore } from '@cortex/graph';
+export interface ListProjectsResult {
+    projects: Array<{
+        id: string;
+        name: string;
+        rootPath: string;
+        privacyLevel: string;
+        fileCount: number;
+        entityCount: number;
+        lastIngestedAt?: string;
+        createdAt: string;
+    }>;
+    total: number;
+}
+export declare function handleListProjects(store: SQLiteStore): Promise<ListProjectsResult>;
+//# sourceMappingURL=projects.d.ts.map

package/packages/mcp/dist/tools/projects.d.ts.map

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