@graphty/graph-io 0.3.48 → 0.3.50

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (600) hide show
  1. package/dist/chunks/{approximations-C2riR4NT.js → approximations-BRXsll0T.js} +2 -2
  2. package/dist/chunks/{approximations-C2riR4NT.js.map → approximations-BRXsll0T.js.map} +1 -1
  3. package/dist/chunks/bends-BGXjv_U4.js +129 -0
  4. package/dist/chunks/bends-BGXjv_U4.js.map +1 -0
  5. package/dist/chunks/{block-Cu22ewuS.js → block-yl0f_qLO.js} +931 -164
  6. package/dist/chunks/block-yl0f_qLO.js.map +1 -0
  7. package/dist/chunks/choose-CczZJaX_.js +717 -0
  8. package/dist/chunks/choose-CczZJaX_.js.map +1 -0
  9. package/dist/chunks/{codes-CV_Bhcyi.js → codes-BE2xir2k.js} +6 -2
  10. package/dist/chunks/codes-BE2xir2k.js.map +1 -0
  11. package/dist/chunks/{constants-D0LqcsLJ.js → constants-CKkYLPtt.js} +2 -2
  12. package/dist/chunks/{constants-D0LqcsLJ.js.map → constants-CKkYLPtt.js.map} +1 -1
  13. package/dist/chunks/{context-cgmmOxZ2.js → context-DizmppHy.js} +5 -4
  14. package/dist/chunks/{context-cgmmOxZ2.js.map → context-DizmppHy.js.map} +1 -1
  15. package/dist/chunks/{convert-BcQ8_jMo.js → convert-Ct2zelbQ.js} +7 -2
  16. package/dist/chunks/convert-Ct2zelbQ.js.map +1 -0
  17. package/dist/chunks/{credentials-BiQsnMTb.js → credentials-CmvJXYeH.js} +67 -16
  18. package/dist/chunks/credentials-CmvJXYeH.js.map +1 -0
  19. package/dist/chunks/{cx-export-BEeF6ymo.js → cx-export-Bt6NoqTQ.js} +3 -3
  20. package/dist/chunks/{cx-export-BEeF6ymo.js.map → cx-export-Bt6NoqTQ.js.map} +1 -1
  21. package/dist/chunks/descriptor-B28U25x4.js +60 -0
  22. package/dist/chunks/descriptor-B28U25x4.js.map +1 -0
  23. package/dist/chunks/{descriptor-BJ-W0Jd-.js → descriptor-Dhez_Cew.js} +11 -2
  24. package/dist/chunks/descriptor-Dhez_Cew.js.map +1 -0
  25. package/dist/chunks/{emit-CD8xnY8s.js → emit-7Jkpg0yd.js} +1788 -133
  26. package/dist/chunks/emit-7Jkpg0yd.js.map +1 -0
  27. package/dist/chunks/{escape-DH2Egt-l.js → escape-CuCIzNMB.js} +8 -8
  28. package/dist/chunks/{escape-DH2Egt-l.js.map → escape-CuCIzNMB.js.map} +1 -1
  29. package/dist/chunks/{export-CZ7VRm4I.js → export-Cha4dRFz.js} +45 -387
  30. package/dist/chunks/export-Cha4dRFz.js.map +1 -0
  31. package/dist/chunks/{exporter-ChjL5fmP.js → exporter-1Ajud15J.js} +9 -8
  32. package/dist/chunks/{exporter-ChjL5fmP.js.map → exporter-1Ajud15J.js.map} +1 -1
  33. package/dist/chunks/{exporter-BIdaoIgh.js → exporter-B6yvL3wy.js} +7 -7
  34. package/dist/chunks/{exporter-BIdaoIgh.js.map → exporter-B6yvL3wy.js.map} +1 -1
  35. package/dist/chunks/{exporter-Dcw7Ldtq.js → exporter-BP6otMO6.js} +6 -6
  36. package/dist/chunks/{exporter-Dcw7Ldtq.js.map → exporter-BP6otMO6.js.map} +1 -1
  37. package/dist/chunks/{exporter-DtVU80Fa.js → exporter-CA5q8ROP.js} +9 -8
  38. package/dist/chunks/{exporter-DtVU80Fa.js.map → exporter-CA5q8ROP.js.map} +1 -1
  39. package/dist/chunks/{exporter-bxxjOrDZ.js → exporter-CQQZFJ2v.js} +1284 -156
  40. package/dist/chunks/exporter-CQQZFJ2v.js.map +1 -0
  41. package/dist/chunks/format-BXiAb-1h.js +408 -0
  42. package/dist/chunks/format-BXiAb-1h.js.map +1 -0
  43. package/dist/chunks/{generic-CP6YD34u.js → generic-Dc21MAdg.js} +387 -31
  44. package/dist/chunks/generic-Dc21MAdg.js.map +1 -0
  45. package/dist/chunks/{importer-B87_fmVx.js → importer-C6NVpCXp.js} +327 -84
  46. package/dist/chunks/importer-C6NVpCXp.js.map +1 -0
  47. package/dist/chunks/{importer-DPZDN40-.js → importer-CKFe4q54.js} +25 -17
  48. package/dist/chunks/importer-CKFe4q54.js.map +1 -0
  49. package/dist/chunks/{importer-Bji2MeWr.js → importer-CKbUbsJA.js} +13 -10
  50. package/dist/chunks/{importer-Bji2MeWr.js.map → importer-CKbUbsJA.js.map} +1 -1
  51. package/dist/chunks/{importer-CB_zV5_L.js → importer-ClCsdgTJ.js} +208 -1104
  52. package/dist/chunks/importer-ClCsdgTJ.js.map +1 -0
  53. package/dist/chunks/{importer-e3huMZbm.js → importer-CyVZTrf0.js} +14 -10
  54. package/dist/chunks/importer-CyVZTrf0.js.map +1 -0
  55. package/dist/chunks/{importer-CVT-JyDE.js → importer-DgG4v1Ms.js} +1537 -355
  56. package/dist/chunks/importer-DgG4v1Ms.js.map +1 -0
  57. package/dist/chunks/{importer-Cyy6UseH.js → importer-asFUrIsj.js} +66 -13
  58. package/dist/chunks/importer-asFUrIsj.js.map +1 -0
  59. package/dist/chunks/{input-Ccg9I22A.js → input-CAxt_aV-.js} +4 -4
  60. package/dist/chunks/{input-Ccg9I22A.js.map → input-CAxt_aV-.js.map} +1 -1
  61. package/dist/chunks/{json-elements-By172SVq.js → json-elements-Cq76WjnZ.js} +4 -4
  62. package/dist/chunks/{json-elements-By172SVq.js.map → json-elements-Cq76WjnZ.js.map} +1 -1
  63. package/dist/chunks/{lexicon-u2SI5xcx.js → lexicon-IVRq2Uoo.js} +282 -74
  64. package/dist/chunks/lexicon-IVRq2Uoo.js.map +1 -0
  65. package/dist/chunks/{ontology-export-BwgMyuF0.js → ontology-export-OMo91mb0.js} +4 -4
  66. package/dist/chunks/{ontology-export-BwgMyuF0.js.map → ontology-export-OMo91mb0.js.map} +1 -1
  67. package/dist/chunks/{records-Cgvxz-Vx.js → records-NJiYvekn.js} +2 -2
  68. package/dist/chunks/{records-Cgvxz-Vx.js.map → records-NJiYvekn.js.map} +1 -1
  69. package/dist/chunks/{report-CgdsL9Hb.js → report-CwMfYa9J.js} +23 -23
  70. package/dist/chunks/{report-CgdsL9Hb.js.map → report-CwMfYa9J.js.map} +1 -1
  71. package/dist/chunks/round-trip-Cy3_SHRZ.js +79 -0
  72. package/dist/chunks/round-trip-Cy3_SHRZ.js.map +1 -0
  73. package/dist/chunks/{sigv4-LkAzsLAu.js → sigv4-BXwVbza3.js} +5 -5
  74. package/dist/chunks/sigv4-BXwVbza3.js.map +1 -0
  75. package/dist/chunks/{styles-CaABMoO1.js → styles-CAVmBLgp.js} +1237 -138
  76. package/dist/chunks/styles-CAVmBLgp.js.map +1 -0
  77. package/dist/chunks/styles-CPczw1Jz.js +1928 -0
  78. package/dist/chunks/styles-CPczw1Jz.js.map +1 -0
  79. package/dist/chunks/styles-boK6Ln54.js +2847 -0
  80. package/dist/chunks/styles-boK6Ln54.js.map +1 -0
  81. package/dist/chunks/{styles-yed-Cs1nmrjn.js → styles-yed-XeFBQ6VS.js} +506 -175
  82. package/dist/chunks/styles-yed-XeFBQ6VS.js.map +1 -0
  83. package/dist/chunks/{text-BuKQVMz2.js → text-ystE2bYi.js} +2 -2
  84. package/dist/chunks/{text-BuKQVMz2.js.map → text-ystE2bYi.js.map} +1 -1
  85. package/dist/csv.js +7 -7
  86. package/dist/cx.js +2 -2
  87. package/dist/cx2.js +2 -2
  88. package/dist/cys.js +1 -1
  89. package/dist/dot.js +8 -4
  90. package/dist/dot.js.map +1 -1
  91. package/dist/gexf.js +42 -12
  92. package/dist/gexf.js.map +1 -1
  93. package/dist/gml.js +848 -194
  94. package/dist/gml.js.map +1 -1
  95. package/dist/graph-io.js +230 -193
  96. package/dist/graph-io.js.map +1 -1
  97. package/dist/graphml.js +3 -3
  98. package/dist/json.js +3 -2
  99. package/dist/neo4j.js +6 -6
  100. package/dist/obo.js +1 -1
  101. package/dist/pajek.js +1 -1
  102. package/dist/positions.js +45 -3
  103. package/dist/positions.js.map +1 -1
  104. package/dist/sources-cypher.js +141 -23
  105. package/dist/sources-cypher.js.map +1 -1
  106. package/dist/sources-ndex.js +2 -2
  107. package/dist/sources-rest.js +32 -6
  108. package/dist/sources-rest.js.map +1 -1
  109. package/dist/sources-sparql.d.ts +1 -0
  110. package/dist/sources-sparql.js +439 -0
  111. package/dist/sources-sparql.js.map +1 -0
  112. package/dist/src/formats/cx/importer.d.ts.map +1 -1
  113. package/dist/src/formats/cx/importer.js +5 -1
  114. package/dist/src/formats/cx/importer.js.map +1 -1
  115. package/dist/src/formats/cx/styles.d.ts +24 -1
  116. package/dist/src/formats/cx/styles.d.ts.map +1 -1
  117. package/dist/src/formats/cx/styles.js +117 -11
  118. package/dist/src/formats/cx/styles.js.map +1 -1
  119. package/dist/src/formats/cx2/importer.d.ts.map +1 -1
  120. package/dist/src/formats/cx2/importer.js +1 -0
  121. package/dist/src/formats/cx2/importer.js.map +1 -1
  122. package/dist/src/formats/cx2/styles.d.ts.map +1 -1
  123. package/dist/src/formats/cx2/styles.js +3 -1
  124. package/dist/src/formats/cx2/styles.js.map +1 -1
  125. package/dist/src/formats/cys/importer.d.ts.map +1 -1
  126. package/dist/src/formats/cys/importer.js +1 -0
  127. package/dist/src/formats/cys/importer.js.map +1 -1
  128. package/dist/src/formats/cys/styles.d.ts +2 -0
  129. package/dist/src/formats/cys/styles.d.ts.map +1 -1
  130. package/dist/src/formats/cys/styles.js +15 -7
  131. package/dist/src/formats/cys/styles.js.map +1 -1
  132. package/dist/src/formats/dot/drawing.d.ts +98 -0
  133. package/dist/src/formats/dot/drawing.d.ts.map +1 -0
  134. package/dist/src/formats/dot/drawing.js +734 -0
  135. package/dist/src/formats/dot/drawing.js.map +1 -0
  136. package/dist/src/formats/dot/exporter.d.ts.map +1 -1
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  139. package/dist/src/formats/dot/importer.d.ts +6 -1
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  141. package/dist/src/formats/dot/importer.js +170 -33
  142. package/dist/src/formats/dot/importer.js.map +1 -1
  143. package/dist/src/formats/dot/index.d.ts +3 -1
  144. package/dist/src/formats/dot/index.d.ts.map +1 -1
  145. package/dist/src/formats/dot/index.js +2 -1
  146. package/dist/src/formats/dot/index.js.map +1 -1
  147. package/dist/src/formats/dot/label-places.d.ts +41 -0
  148. package/dist/src/formats/dot/label-places.d.ts.map +1 -0
  149. package/dist/src/formats/dot/label-places.js +185 -0
  150. package/dist/src/formats/dot/label-places.js.map +1 -0
  151. package/dist/src/formats/dot/names.d.ts +13 -0
  152. package/dist/src/formats/dot/names.d.ts.map +1 -1
  153. package/dist/src/formats/dot/names.js +13 -0
  154. package/dist/src/formats/dot/names.js.map +1 -1
  155. package/dist/src/formats/dot/record.d.ts +50 -0
  156. package/dist/src/formats/dot/record.d.ts.map +1 -0
  157. package/dist/src/formats/dot/record.js +275 -0
  158. package/dist/src/formats/dot/record.js.map +1 -0
  159. package/dist/src/formats/dot/styles.d.ts +72 -2
  160. package/dist/src/formats/dot/styles.d.ts.map +1 -1
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  162. package/dist/src/formats/dot/styles.js.map +1 -1
  163. package/dist/src/formats/gexf/dialog-metrics.d.ts +15 -0
  164. package/dist/src/formats/gexf/dialog-metrics.d.ts.map +1 -0
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  167. package/dist/src/formats/gexf/importer.d.ts +7 -0
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  171. package/dist/src/formats/gexf/preview.d.ts +77 -0
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  175. package/dist/src/formats/gexf/schema.d.ts.map +1 -1
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  178. package/dist/src/formats/gexf/styles.d.ts +58 -31
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  180. package/dist/src/formats/gexf/styles.js +848 -225
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  182. package/dist/src/formats/gml/importer.d.ts +5 -2
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  190. package/dist/src/formats/gml/positions.d.ts +7 -0
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  262. package/dist/src/index.d.ts +6 -5
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package/dist/src/formats/graphml/yfiles.d.ts CHANGED
@@ -68,9 +68,9 @@ export declare function isGraphicsColumn(meta: {
68
68
  export declare function staleGraphicsRows(column: Column, table: Iterable<Column>, domain: "node" | "edge"): number;
69
69
  /**
70
70
  * The mapped values of one `<data>` tree of a yFiles key: a ShapeNode's for a node, a
71
- * PolyLineEdge's for an edge. A GenericNode, ImageNode, SVGNode or ProxyAutoBoundsNode (a group,
72
- * read through the realizer `Realizers@active` names) gives its geometry only: position, width and
73
- * height. Nothing for any other graphics (BezierEdge, ...).
71
+ * PolyLineEdge's for an edge. A GenericNode, ImageNode, SVGNode, UMLClassNode, UMLNoteNode, TableNode
72
+ * or ProxyAutoBoundsNode (a group, read through the realizer `Realizers@active` names), and yFiles 3's
73
+ * NodeGeometry `RectD`, give their geometry only: position, width and height. Nothing for any other graphics (BezierEdge, ...).
74
74
  * @param domain - node or edge
75
75
  * @param tree - the `<data>` content as tree.ts builds it
76
76
  * @param unmapped - receives the fields whose text is present but not a number (not mapped)
package/dist/src/formats/graphml/yfiles.d.ts.map CHANGED
@@ -1 +1 @@
1
- {"version":3,"file":"yfiles.d.ts","sourceRoot":"","sources":["../../../../src/formats/graphml/yfiles.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;GAoBG;AAEH,OAAO,EAAE,KAAK,MAAM,EAAE,KAAK,UAAU,EAAE,KAAK,aAAa,EAAmB,MAAM,uBAAuB,CAAC;AAG1G,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,0BAA0B,CAAC;AAyClE;;;;;;;GAOG;AACH,wBAAgB,YAAY,CAAC,MAAM,EAAE,MAAM,GAAG,MAAM,EAAE,KAAK,EAAE,MAAM,EAAE,KAAK,EAAE,MAAM,GAAG,UAAU,CAc9F;AAED;;;;;GAKG;AACH,wBAAgB,eAAe,CAAC,QAAQ,EAAE,aAAa,GAAG,iBAAiB,GAAG,IAAI,CAEjF;AAED;;;;;;;;GAQG;AACH,wBAAgB,gBAAgB,CAAC,IAAI,EAAE;IACnC,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAC;IACtB,QAAQ,CAAC,KAAK,EAAE,MAAM,CAAC;IACvB,QAAQ,CAAC,MAAM,EAAE;QAAE,QAAQ,CAAC,SAAS,EAAE,MAAM,GAAG,IAAI,CAAA;KAAE,GAAG,IAAI,CAAC;CACjE,GAAG,OAAO,CAEV;AAED;;;;;;;;;;;GAWG;AACH,wBAAgB,iBAAiB,CAAC,MAAM,EAAE,MAAM,EAAE,KAAK,EAAE,QAAQ,CAAC,MAAM,CAAC,EAAE,MAAM,EAAE,MAAM,GAAG,MAAM,GAAG,MAAM,CAkB1G;AAwBD;;;;;;;;;;GAUG;AACH,wBAAgB,cAAc,CAAC,MAAM,EAAE,MAAM,GAAG,MAAM,EAAE,IAAI,EAAE,OAAO,EAAE,QAAQ,GAAE,MAAM,EAAO,GAAG,CAAC,MAAM,EAAE,OAAO,CAAC,EAAE,CAgBnH"}
1
+ {"version":3,"file":"yfiles.d.ts","sourceRoot":"","sources":["../../../../src/formats/graphml/yfiles.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;GAoBG;AAEH,OAAO,EAAE,KAAK,MAAM,EAAE,KAAK,UAAU,EAAE,KAAK,aAAa,EAAmB,MAAM,uBAAuB,CAAC;AAG1G,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,0BAA0B,CAAC;AAyClE;;;;;;;GAOG;AACH,wBAAgB,YAAY,CAAC,MAAM,EAAE,MAAM,GAAG,MAAM,EAAE,KAAK,EAAE,MAAM,EAAE,KAAK,EAAE,MAAM,GAAG,UAAU,CAc9F;AAED;;;;;GAKG;AACH,wBAAgB,eAAe,CAAC,QAAQ,EAAE,aAAa,GAAG,iBAAiB,GAAG,IAAI,CAEjF;AAED;;;;;;;;GAQG;AACH,wBAAgB,gBAAgB,CAAC,IAAI,EAAE;IACnC,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAC;IACtB,QAAQ,CAAC,KAAK,EAAE,MAAM,CAAC;IACvB,QAAQ,CAAC,MAAM,EAAE;QAAE,QAAQ,CAAC,SAAS,EAAE,MAAM,GAAG,IAAI,CAAA;KAAE,GAAG,IAAI,CAAC;CACjE,GAAG,OAAO,CAEV;AAED;;;;;;;;;;;GAWG;AACH,wBAAgB,iBAAiB,CAAC,MAAM,EAAE,MAAM,EAAE,KAAK,EAAE,QAAQ,CAAC,MAAM,CAAC,EAAE,MAAM,EAAE,MAAM,GAAG,MAAM,GAAG,MAAM,CAkB1G;AAwBD;;;;;;;;;;GAUG;AACH,wBAAgB,cAAc,CAAC,MAAM,EAAE,MAAM,GAAG,MAAM,EAAE,IAAI,EAAE,OAAO,EAAE,QAAQ,GAAE,MAAM,EAAO,GAAG,CAAC,MAAM,EAAE,OAAO,CAAC,EAAE,CA6BnH"}
package/dist/src/formats/graphml/yfiles.js CHANGED
@@ -152,9 +152,9 @@ function wantedGraphics(trees, domain, field, r) {
152
152
  }
153
153
  /**
154
154
  * The mapped values of one `<data>` tree of a yFiles key: a ShapeNode's for a node, a
155
- * PolyLineEdge's for an edge. A GenericNode, ImageNode, SVGNode or ProxyAutoBoundsNode (a group,
156
- * read through the realizer `Realizers@active` names) gives its geometry only: position, width and
157
- * height. Nothing for any other graphics (BezierEdge, ...).
155
+ * PolyLineEdge's for an edge. A GenericNode, ImageNode, SVGNode, UMLClassNode, UMLNoteNode, TableNode
156
+ * or ProxyAutoBoundsNode (a group, read through the realizer `Realizers@active` names), and yFiles 3's
157
+ * NodeGeometry `RectD`, give their geometry only: position, width and height. Nothing for any other graphics (BezierEdge, ...).
158
158
  * @param domain - node or edge
159
159
  * @param tree - the `<data>` content as tree.ts builds it
160
160
  * @param unmapped - receives the fields whose text is present but not a number (not mapped)
@@ -165,7 +165,17 @@ export function graphicsValues(domain, tree, unmapped = []) {
165
165
  const out = [];
166
166
  if (domain === "node") {
167
167
  const shape = child(tree, "ShapeNode");
168
- if (shape === undefined) {
168
+ const rect = child(tree, "RectD");
169
+ if (rect !== undefined) {
170
+ // yFiles 3's NodeGeometry: the same top-left corner and size as yEd's Geometry, capitalized
171
+ geometryValues({
172
+ "@_x": attr(rect, "X"),
173
+ "@_y": attr(rect, "Y"),
174
+ "@_width": attr(rect, "Width"),
175
+ "@_height": attr(rect, "Height"),
176
+ }, out, unmapped);
177
+ }
178
+ else if (shape === undefined) {
169
179
  geometryValues(child(geometryNode(tree), "Geometry"), out, unmapped);
170
180
  }
171
181
  else {
@@ -217,9 +227,9 @@ function geometryValues(geometry, out, unmapped) {
217
227
  push(out, "height", checked(attr(geometry, "height"), "height", unmapped));
218
228
  }
219
229
  /** The node graphics besides ShapeNode whose Geometry is read. */
220
- const GEOMETRY_NODES = ["GenericNode", "ImageNode", "SVGNode"];
230
+ const GEOMETRY_NODES = ["GenericNode", "ImageNode", "SVGNode", "UMLClassNode", "UMLNoteNode", "TableNode"];
221
231
  /**
222
- * The element holding a non-ShapeNode node's Geometry: a GenericNode, ImageNode or SVGNode, or
232
+ * The element holding a non-ShapeNode node's Geometry: one of GEOMETRY_NODES, or
223
233
  * the active realizer of a ProxyAutoBoundsNode (`Realizers@active`, default 0).
224
234
  * @param tree - the `<data>` content
225
235
  * @returns the element, or undefined
package/dist/src/formats/graphml/yfiles.js.map CHANGED
@@ -1 +1 @@
1
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package/dist/src/formats/json/dialect.d.ts CHANGED
@@ -109,11 +109,12 @@ export declare function isJsonDialect(value: unknown): value is JsonDialect;
109
109
  */
110
110
  export declare function isJsonImportDialect(value: unknown): value is JsonImportDialect;
111
111
  /**
112
- * The dialect of a parsed JSON document, by the shape rules of design section 8.2 (Cytoscape:
112
+ * The dialect of a parsed JSON document, told by its shape (Cytoscape:
113
113
  * `elements` or a top-level array of `{ data }` elements; OBO Graphs: `graphs[]` whose first graph
114
114
  * has an edge with `sub` (or `subj`) and `obj` or a `pred`, or a node with `lbl`, `meta` or an OWL
115
115
  * `type`; JGF: `graph.nodes` / `graph.edges` or any other `graphs[]`; graphology: `options.type` / `options.multi`, `key` nodes without `id`, edges with
116
- * `undirected` or an `attributes` record, and vis: edges with `from` / `to`, both only without
116
+ * `undirected` or an `attributes` record, and vis: edges with `from` / `to`, or no edge record and an `options`
117
+ * object holding a vis-network option group (`nodes`, `edges`, `groups`, `physics`, ...), both only without
117
118
  * NetworkX's `links` / `directed` / `multigraph` / `graph` keys; d3: `links` without
118
119
  * `directed` / `multigraph` / `graph`; NetworkX adjacency_data: `nodes` and `adjacency` without
119
120
  * `links` / `edges`; NetworkX tree_data: `children` without `nodes` / `links` / `edges`; else
package/dist/src/formats/json/dialect.d.ts.map CHANGED
@@ -1 +1 @@
1
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package/dist/src/formats/json/dialect.js CHANGED
@@ -92,11 +92,12 @@ export function isJsonImportDialect(value) {
92
92
  return typeof value === "string" && JSON_IMPORT_DIALECTS.includes(value);
93
93
  }
94
94
  /**
95
- * The dialect of a parsed JSON document, by the shape rules of design section 8.2 (Cytoscape:
95
+ * The dialect of a parsed JSON document, told by its shape (Cytoscape:
96
96
  * `elements` or a top-level array of `{ data }` elements; OBO Graphs: `graphs[]` whose first graph
97
97
  * has an edge with `sub` (or `subj`) and `obj` or a `pred`, or a node with `lbl`, `meta` or an OWL
98
98
  * `type`; JGF: `graph.nodes` / `graph.edges` or any other `graphs[]`; graphology: `options.type` / `options.multi`, `key` nodes without `id`, edges with
99
- * `undirected` or an `attributes` record, and vis: edges with `from` / `to`, both only without
99
+ * `undirected` or an `attributes` record, and vis: edges with `from` / `to`, or no edge record and an `options`
100
+ * object holding a vis-network option group (`nodes`, `edges`, `groups`, `physics`, ...), both only without
100
101
  * NetworkX's `links` / `directed` / `multigraph` / `graph` keys; d3: `links` without
101
102
  * `directed` / `multigraph` / `graph`; NetworkX adjacency_data: `nodes` and `adjacency` without
102
103
  * `links` / `edges`; NetworkX tree_data: `children` without `nodes` / `links` / `edges`; else
@@ -169,13 +170,43 @@ function sniffEdgeListDialect(root) {
169
170
  if (record !== undefined) {
170
171
  return record;
171
172
  }
173
+ // vis: a `{ nodes, edges, options }` document with no edge record still carries vis-network's options
174
+ if (!networkx && firstEdge === null && isVisOptions(root.options)) {
175
+ return "vis";
176
+ }
172
177
  const bare = !hasKey(root, "directed") && !hasKey(root, "multigraph") && !hasKey(root, "graph");
173
178
  return bare && hasKey(root, "links") ? "d3" : "node-link";
174
179
  }
180
+ /** vis-network's top-level option groups (https://visjs.github.io/vis-network/docs/network/#options). */
181
+ const VIS_OPTION_GROUPS = [
182
+ "nodes",
183
+ "edges",
184
+ "groups",
185
+ "physics",
186
+ "layout",
187
+ "interaction",
188
+ "manipulation",
189
+ "configure",
190
+ "autoResize",
191
+ "clickToUse",
192
+ "locale",
193
+ "locales",
194
+ "height",
195
+ "width",
196
+ ];
197
+ /**
198
+ * Whether a document's `options` is vis-network's: an object holding one of its top-level option groups.
199
+ * @param options - the document's `options`
200
+ * @returns true for vis-network options
201
+ */
202
+ function isVisOptions(options) {
203
+ return isJsonObject(options) && VIS_OPTION_GROUPS.some((k) => hasKey(options, k));
204
+ }
175
205
  /**
176
206
  * The graphology or vis dialect, read from the first node and edge records of a document without
177
- * NetworkX's keys: graphology for a `key` node without `id`, or an edge without `from` that has
178
- * `undirected` or an `attributes` record; vis for an edge with `from` and `to` but no `source`.
207
+ * NetworkX's keys: graphology for a `key` node without `id`, an edge without `from` that has
208
+ * `undirected` or an `attributes` record, or, with no edges, an `id` node with an `attributes` record
209
+ * (Gephi's JSON export); vis for an edge with `from` and `to` but no `source`.
179
210
  * @param firstNode - the first node record, or null
180
211
  * @param firstEdge - the first edge record, or null
181
212
  * @returns the dialect, or undefined when the records name neither
@@ -185,7 +216,10 @@ function sniffRecordDialect(firstNode, firstEdge) {
185
216
  return "graphology";
186
217
  }
187
218
  if (firstEdge === null) {
188
- return undefined;
219
+ // Gephi's JSON export of a graph with no edges: its nodes still carry the exporter's `attributes` record
220
+ return firstNode !== null && hasKey(firstNode, "id") && isJsonObject(firstNode.attributes)
221
+ ? "graphology"
222
+ : undefined;
189
223
  }
190
224
  if (!hasKey(firstEdge, "from")) {
191
225
  return hasKey(firstEdge, "undirected") || isJsonObject(firstEdge.attributes) ? "graphology" : undefined;
package/dist/src/formats/json/dialect.js.map CHANGED
@@ -1 +1 @@
1
- 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1
+ {"version":3,"file":"dialect.js","sourceRoot":"","sources":["../../../../src/formats/json/dialect.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;GAaG;AAIH,OAAO,EAAE,YAAY,EAAE,MAAM,wBAAwB,CAAC;AACtD,OAAO,EAAE,iBAAiB,EAAE,MAAM,sBAAsB,CAAC;AASzD;;;GAGG;AACH,MAAM,CAAC,MAAM,aAAa,GAA2B,MAAM,CAAC,MAAM,CAAC;IAC/D,WAAW;IACX,IAAI;IACJ,KAAK;IACL,WAAW;IACX,YAAY;IACZ,KAAK;IACL,WAAW;CACd,CAAC,CAAC;AAUH;;;GAGG;AACH,MAAM,CAAC,MAAM,oBAAoB,GAAiC,MAAM,CAAC,MAAM,CAAC;IAC5E,GAAG,aAAa;IAChB,WAAW;IACX,MAAM;CACT,CAAC,CAAC;AAEH;;;GAGG;AACH,MAAM,CAAC,MAAM,QAAQ,GAAG,MAAM,CAAC;AA+B/B;;;;;;;GAOG;AACH,MAAM,UAAU,WAAW,CAAC,QAAuB;IAC/C,MAAM,KAAK,GAAG,QAAQ,CAAC,IAAI,CAAC,KAAK,CAAC,QAAQ,CAAC,CAAC;IAC5C,OAAO,YAAY,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,IAAI,CAAC;AAC9C,CAAC;AAED;;;;;GAKG;AACH,MAAM,UAAU,YAAY,CAAC,KAAc;IACvC,OAAO,OAAO,KAAK,KAAK,QAAQ,IAAI,KAAK,KAAK,IAAI,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC;AAChF,CAAC;AAED;;;;;;;GAOG;AACH,MAAM,UAAU,MAAM,CAAC,MAAyC,EAAE,GAAW;IACzE,OAAO,MAAM,CAAC,MAAM,CAAC,MAAM,EAAE,GAAG,CAAC,CAAC;AACtC,CAAC;AAED;;;;;GAKG;AACH,MAAM,UAAU,aAAa,CAAC,KAAc;IACxC,OAAO,OAAO,KAAK,KAAK,QAAQ,IAAK,aAAmC,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC;AAC7F,CAAC;AAED;;;;;GAKG;AACH,MAAM,UAAU,mBAAmB,CAAC,KAAc;IAC9C,OAAO,OAAO,KAAK,KAAK,QAAQ,IAAK,oBAA0C,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC;AACpG,CAAC;AAED;;;;;;;;;;;;;;;GAeG;AACH,MAAM,UAAU,gBAAgB,CAAC,IAAa;IAC1C,IAAI,KAAK,CAAC,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC;QACtB,MAAM,KAAK,GAAG,eAAe,CAAC,IAAI,CAAC,CAAC;QACpC,OAAO,IAAI,CAAC,MAAM,KAAK,CAAC,IAAI,CAAC,KAAK,KAAK,IAAI,IAAI,YAAY,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC,WAAW,CAAC,CAAC,CAAC,IAAI,CAAC;IAClG,CAAC;IACD,IAAI,CAAC,YAAY,CAAC,IAAI,CAAC,EAAE,CAAC;QACtB,OAAO,IAAI,CAAC;IAChB,CAAC;IACD,MAAM,OAAO,GAAG,mBAAmB,CAAC,IAAI,CAAC,IAAI,oBAAoB,CAAC,IAAI,CAAC,CAAC;IACxE,OAAO,OAAO,KAAK,SAAS,CAAC,CAAC,CAAC,oBAAoB,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,OAAO,CAAC;AACxE,CAAC;AAED;;;;;GAKG;AACH,SAAS,mBAAmB,CAAC,IAA6B;IACtD,IAAI,MAAM,CAAC,IAAI,EAAE,UAAU,CAAC,EAAE,CAAC;QAC3B,OAAO,WAAW,CAAC;IACvB,CAAC;IACD,IAAI,YAAY,CAAC,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,MAAM,CAAC,IAAI,CAAC,KAAK,EAAE,OAAO,CAAC,IAAI,MAAM,CAAC,IAAI,CAAC,KAAK,EAAE,OAAO,CAAC,CAAC,EAAE,CAAC;QAC3F,OAAO,KAAK,CAAC;IACjB,CAAC;IACD,IAAI,KAAK,CAAC,OAAO,CAAC,IAAI,CAAC,MAAM,CAAC,EAAE,CAAC;QAC7B,uFAAuF;QACvF,OAAO,IAAI,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC,CAAU,EAAE,EAAE,CAAC,YAAY,CAAC,CAAC,CAAC,IAAI,UAAU,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,WAAW,CAAC,CAAC,CAAC,KAAK,CAAC;IACpG,CAAC;IACD,OAAO,SAAS,CAAC;AACrB,CAAC;AAED;;;;;GAKG;AACH,SAAS,oBAAoB,CAAC,IAA6B;IACvD,IAAI,MAAM,CAAC,IAAI,EAAE,OAAO,CAAC,IAAI,MAAM,CAAC,IAAI,EAAE,OAAO,CAAC,EAAE,CAAC;QACjD,OAAO,SAAS,CAAC;IACrB,CAAC;IACD,IAAI,MAAM,CAAC,IAAI,EAAE,OAAO,CAAC,EAAE,CAAC;QACxB,OAAO,MAAM,CAAC,IAAI,EAAE,WAAW,CAAC,CAAC,CAAC,CAAC,WAAW,CAAC,CAAC,CAAC,SAAS,CAAC;IAC/D,CAAC;IACD,OAAO,MAAM,CAAC,IAAI,EAAE,UAAU,CAAC,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC,CAAC,IAAI,CAAC;AACpD,CAAC;AAED;;;;GAIG;AACH,SAAS,oBAAoB,CAAC,IAA6B;IACvD,MAAM,SAAS,GAAG,eAAe,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;IAC9C,MAAM,SAAS,GAAG,eAAe,CAAC,MAAM,CAAC,IAAI,EAAE,OAAO,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;IACnF,IAAI,YAAY,CAAC,IAAI,CAAC,OAAO,CAAC,IAAI,CAAC,MAAM,CAAC,IAAI,CAAC,OAAO,EAAE,MAAM,CAAC,IAAI,MAAM,CAAC,IAAI,CAAC,OAAO,EAAE,OAAO,CAAC,CAAC,EAAE,CAAC;QAChG,OAAO,YAAY,CAAC;IACxB,CAAC;IACD,iGAAiG;IACjG,kGAAkG;IAClG,MAAM,QAAQ,GACV,MAAM,CAAC,IAAI,EAAE,OAAO,CAAC,IAAI,MAAM,CAAC,IAAI,EAAE,UAAU,CAAC,IAAI,MAAM,CAAC,IAAI,EAAE,YAAY,CAAC,IAAI,MAAM,CAAC,IAAI,EAAE,OAAO,CAAC,CAAC;IAC7G,MAAM,MAAM,GAAG,QAAQ,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,kBAAkB,CAAC,SAAS,EAAE,SAAS,CAAC,CAAC;IAC/E,IAAI,MAAM,KAAK,SAAS,EAAE,CAAC;QACvB,OAAO,MAAM,CAAC;IAClB,CAAC;IACD,sGAAsG;IACtG,IAAI,CAAC,QAAQ,IAAI,SAAS,KAAK,IAAI,IAAI,YAAY,CAAC,IAAI,CAAC,OAAO,CAAC,EAAE,CAAC;QAChE,OAAO,KAAK,CAAC;IACjB,CAAC;IACD,MAAM,IAAI,GAAG,CAAC,MAAM,CAAC,IAAI,EAAE,UAAU,CAAC,IAAI,CAAC,MAAM,CAAC,IAAI,EAAE,YAAY,CAAC,IAAI,CAAC,MAAM,CAAC,IAAI,EAAE,OAAO,CAAC,CAAC;IAChG,OAAO,IAAI,IAAI,MAAM,CAAC,IAAI,EAAE,OAAO,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,WAAW,CAAC;AAC9D,CAAC;AAED,yGAAyG;AACzG,MAAM,iBAAiB,GAAG;IACtB,OAAO;IACP,OAAO;IACP,QAAQ;IACR,SAAS;IACT,QAAQ;IACR,aAAa;IACb,cAAc;IACd,WAAW;IACX,YAAY;IACZ,YAAY;IACZ,QAAQ;IACR,SAAS;IACT,QAAQ;IACR,OAAO;CACV,CAAC;AAEF;;;;GAIG;AACH,SAAS,YAAY,CAAC,OAAgB;IAClC,OAAO,YAAY,CAAC,OAAO,CAAC,IAAI,iBAAiB,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,MAAM,CAAC,OAAO,EAAE,CAAC,CAAC,CAAC,CAAC;AACtF,CAAC;AAED;;;;;;;;GAQG;AACH,SAAS,kBAAkB,CACvB,SAAyC,EACzC,SAAyC;IAEzC,IAAI,SAAS,KAAK,IAAI,IAAI,MAAM,CAAC,SAAS,EAAE,KAAK,CAAC,IAAI,CAAC,MAAM,CAAC,SAAS,EAAE,IAAI,CAAC,EAAE,CAAC;QAC7E,OAAO,YAAY,CAAC;IACxB,CAAC;IACD,IAAI,SAAS,KAAK,IAAI,EAAE,CAAC;QACrB,yGAAyG;QACzG,OAAO,SAAS,KAAK,IAAI,IAAI,MAAM,CAAC,SAAS,EAAE,IAAI,CAAC,IAAI,YAAY,CAAC,SAAS,CAAC,UAAU,CAAC;YACtF,CAAC,CAAC,YAAY;YACd,CAAC,CAAC,SAAS,CAAC;IACpB,CAAC;IACD,IAAI,CAAC,MAAM,CAAC,SAAS,EAAE,MAAM,CAAC,EAAE,CAAC;QAC7B,OAAO,MAAM,CAAC,SAAS,EAAE,YAAY,CAAC,IAAI,YAAY,CAAC,SAAS,CAAC,UAAU,CAAC,CAAC,CAAC,CAAC,YAAY,CAAC,CAAC,CAAC,SAAS,CAAC;IAC5G,CAAC;IACD,OAAO,MAAM,CAAC,SAAS,EAAE,IAAI,CAAC,IAAI,CAAC,MAAM,CAAC,SAAS,EAAE,QAAQ,CAA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package/dist/src/formats/json/importer.d.ts CHANGED
@@ -37,7 +37,7 @@ import { type ResolvedImportOptions } from "../../common/options.js";
37
37
  import { ImportReportBuilder } from "../../common/report.js";
38
38
  import { type CommonImportOptions, type GraphChoiceOptions, type GraphImporter } from "../../types.js";
39
39
  import { type JsonImportDialect, type JsonShapeMeta } from "./dialect.js";
40
- import { type JsonStyleSource } from "./styles.js";
40
+ import { type JsonStyleSource, type SigmaSettings } from "./styles.js";
41
41
  /**
42
42
  * The format-specific options of the JSON importer. `graphIndex` / `graphName` choose one graph of
43
43
  * a JGF or OBO Graphs `graphs` array (the first by default); a graph's name is its `id`, else its
@@ -112,6 +112,13 @@ export interface JsonImportOptions extends GraphChoiceOptions, CommonImportOptio
112
112
  * @defaultValue next to the nodes
113
113
  */
114
114
  edgesPath?: string | undefined;
115
+ /**
116
+ * graphology and Gephi JSON documents: the sigma.js settings the graph is drawn with, which are the application's
117
+ * and never in the file. `renderEdgeLabels: true` draws the edges' labels, between two labeled nodes or, with
118
+ * `edgeLabelAnchors: "allNodes"`, on every edge; other settings are accepted and not read.
119
+ * @defaultValue sigma.js's own settings (no edge labels)
120
+ */
121
+ sigmaSettings?: Readonly<Record<string, unknown>> | undefined;
115
122
  }
116
123
  /**
117
124
  * The issue codes the JSON importer records, by name: the codes shared with
@@ -286,6 +293,8 @@ interface ResolvedJsonOptions {
286
293
  readonly edgesPath: readonly string[] | null;
287
294
  /** Set by importAll(): every graph of a `graphs` array is read, so none is reported as skipped. */
288
295
  readonly all?: boolean;
296
+ /** graphology: the sigma.js settings of the drawing. */
297
+ readonly sigma: SigmaSettings;
289
298
  }
290
299
  /**
291
300
  * Writes inferred attribute cells for one table, caching the handle of every column after its
@@ -539,13 +548,15 @@ export declare class ImportContext {
539
548
  * @param structural - the element keys that are not attributes
540
549
  * @param element - the element name for issues
541
550
  * @param how - `weightFrom`: the weight key to skip in the dict; `plain`: write the element-level keys under their
542
- * own names, not with the `#element` suffix
551
+ * own names, not with the `#element` suffix; `dataKeys`: the dict keys written with the `#data` suffix
543
552
  * @param how.weightFrom - the weight key to skip in the dict, or null (the default)
544
553
  * @param how.plain - write the element-level keys under their own names (default false)
554
+ * @param how.dataKeys - the dict keys that name an element-level key, written as `<key>#data` (default none)
545
555
  */
546
556
  writeNested(writer: AttributeWriter, row: number, record: JsonRecord, dict: JsonRecord, structural: ReadonlySet<string>, element: string, how?: {
547
557
  readonly weightFrom?: string | null;
548
558
  readonly plain?: boolean;
559
+ readonly dataKeys?: ReadonlySet<string>;
549
560
  }): void;
550
561
  /**
551
562
  * Write a spec-typed string field (JGF label / relation), reporting a value of another type.
package/dist/src/formats/json/importer.d.ts.map CHANGED
@@ -1 +1 @@
1
- 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1
+ 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package/dist/src/formats/json/importer.js CHANGED
@@ -46,7 +46,7 @@ import { STYLE_BLOCK_NAME } from "../../styles/io/block.js";
46
46
  import { CLASSES_COLUMN, CYTOSCAPE_ELEMENT_KEYS, CYTOSCAPE_STRUCTURAL_KEYS, DIALECT_DEFAULT_DIRECTED, hasKey, isJsonImportDialect, isJsonObject, JSON_IMPORT_DIALECTS, META_KEY, NODE_LINK_SOURCE_KEYS, NODE_LINK_TARGET_KEYS, PARENT_COLUMN, POSITION_COLUMN, sniffJsonDialect, SUFFIX, } from "./dialect.js";
47
47
  import { importObographs } from "./obographs.js";
48
48
  import { jsonPositions } from "./positions.js";
49
- import { jsonStyles } from "./styles.js";
49
+ import { jsonStyles, SIGMA_DEFAULT_SETTINGS } from "./styles.js";
50
50
  /**
51
51
  * The issue codes the JSON importer records, by name: the codes shared with
52
52
  * the other importers and the JSON-specific ones. A key is the code without
@@ -233,6 +233,13 @@ const GRAPHOLOGY_EDGE_KEYS = new Set(["key", "source", "target", "attributes", "
233
233
  const GEPHI_NODE_KEYS = new Set(["id", "attributes"]);
234
234
  /** The structural keys of an edge in Gephi's JSON export. */
235
235
  const GEPHI_EDGE_KEYS = new Set([...GRAPHOLOGY_EDGE_KEYS, "id"]);
236
+ /**
237
+ * The keys Gephi's JSON export writes beside a node's `attributes`, the ones sigma.js draws: a Gephi column named
238
+ * like one of them is data under `attributes`, read as `<key>#data` so it never stands in for the element's own key.
239
+ */
240
+ const GEPHI_NODE_DISPLAY_KEYS = new Set(["label", "x", "y", "size", "color"]);
241
+ /** The keys Gephi's JSON export writes beside an edge's `attributes` (see GEPHI_NODE_DISPLAY_KEYS). */
242
+ const GEPHI_EDGE_DISPLAY_KEYS = new Set(["label", "size", "color"]);
236
243
  /** The vis.js endpoint keys. */
237
244
  const VIS_SOURCE_KEYS = Object.freeze(["from"]);
238
245
  const VIS_TARGET_KEYS = Object.freeze(["to"]);
@@ -288,8 +295,30 @@ function resolveJsonOptions(options) {
288
295
  typedefs,
289
296
  nodesPath,
290
297
  edgesPath,
298
+ sigma: sigmaSettingsOption(o.sigmaSettings),
291
299
  };
292
300
  }
301
+ /**
302
+ * Check the `sigmaSettings` option: an object, whose `renderEdgeLabels` and `edgeLabelAnchors` are sigma's values.
303
+ * @param value - the caller's value
304
+ * @returns the settings graph-io reads, sigma's own where not given
305
+ */
306
+ function sigmaSettingsOption(value) {
307
+ if (value === undefined) {
308
+ return SIGMA_DEFAULT_SETTINGS;
309
+ }
310
+ if (!isJsonObject(value)) {
311
+ throw unsupportedOption("sigmaSettings", value, ["an object of sigma.js settings"]);
312
+ }
313
+ const { renderEdgeLabels = false, edgeLabelAnchors = "nodeLabels" } = value;
314
+ if (typeof renderEdgeLabels !== "boolean") {
315
+ throw unsupportedOption("sigmaSettings.renderEdgeLabels", renderEdgeLabels, ["true", "false"]);
316
+ }
317
+ if (edgeLabelAnchors !== "nodeLabels" && edgeLabelAnchors !== "allNodes") {
318
+ throw unsupportedOption("sigmaSettings.edgeLabelAnchors", edgeLabelAnchors, ["nodeLabels", "allNodes"]);
319
+ }
320
+ return { renderEdgeLabels, edgeLabelAnchors };
321
+ }
293
322
  /**
294
323
  * Check a dotted path option: object keys joined by dots, none of them empty.
295
324
  * @param name - the option name
@@ -993,15 +1022,17 @@ export class ImportContext {
993
1022
  * @param structural - the element keys that are not attributes
994
1023
  * @param element - the element name for issues
995
1024
  * @param how - `weightFrom`: the weight key to skip in the dict; `plain`: write the element-level keys under their
996
- * own names, not with the `#element` suffix
1025
+ * own names, not with the `#element` suffix; `dataKeys`: the dict keys written with the `#data` suffix
997
1026
  * @param how.weightFrom - the weight key to skip in the dict, or null (the default)
998
1027
  * @param how.plain - write the element-level keys under their own names (default false)
1028
+ * @param how.dataKeys - the dict keys that name an element-level key, written as `<key>#data` (default none)
999
1029
  */
1000
1030
  writeNested(writer, row, record, dict, structural, element, how = {}) {
1001
- const { weightFrom = null, plain = false } = how;
1031
+ const { weightFrom = null, plain = false, dataKeys } = how;
1002
1032
  for (const key of Object.keys(dict)) {
1003
1033
  if (key !== weightFrom) {
1004
- writer.write(row, key, dict[key], SUFFIX.data, element);
1034
+ const name = dataKeys?.has(key) === true ? `${key}${SUFFIX.data}` : key;
1035
+ writer.write(row, name, dict[key], SUFFIX.data, element);
1005
1036
  }
1006
1037
  }
1007
1038
  for (const key of Object.keys(record)) {
@@ -2178,7 +2209,7 @@ function importGraphology(ctx, root) {
2178
2209
  // `y`, `color`, `size`) beside `attributes`; they are read as attributes, not as unknown element keys
2179
2210
  const firstNode = nodes.find((n) => isJsonObject(n));
2180
2211
  const gephi = isJsonObject(firstNode) && !hasKey(firstNode, "key") && hasKey(firstNode, "id");
2181
- ctx.styleSource = { dialect: "graphology", block: blockOf(root), gephi };
2212
+ ctx.styleSource = { dialect: "graphology", block: blockOf(root), gephi, sigma: ctx.json.sigma };
2182
2213
  ctx.reportNodeIdFrom("graphology", "the node key");
2183
2214
  ctx.sink.reserve(nodes.length, edges.length);
2184
2215
  importGraphologyNodes(ctx, nodes, gephi);
@@ -2325,6 +2356,7 @@ function pushGraphologyEdge(ctx, record, element, ids, declared, violations) {
2325
2356
  ctx.writeNested(ctx.edges, edge, record, attributes, gephi ? GEPHI_EDGE_KEYS : GRAPHOLOGY_EDGE_KEYS, element, {
2326
2357
  weightFrom: ctx.options.weightFrom,
2327
2358
  plain: gephi,
2359
+ dataKeys: gephi ? GEPHI_EDGE_DISPLAY_KEYS : undefined,
2328
2360
  });
2329
2361
  if (declared.allowSelfLoops === false && u === v) {
2330
2362
  violations.selfLoops++;
@@ -2380,7 +2412,10 @@ function pushNestedNode(ctx, id, record, dictKey, structural, element, plain = f
2380
2412
  if (dict !== undefined && dict !== null && !isJsonObject(dict)) {
2381
2413
  ctx.report.error("validation-error", JSON_ISSUE.BAD_VALUE, `${element}: ${dictKey} must be an object, found ${describe(dict)}`, { element });
2382
2414
  }
2383
- ctx.writeNested(ctx.nodes, index, record, isJsonObject(dict) ? dict : {}, structural, element, { plain });
2415
+ ctx.writeNested(ctx.nodes, index, record, isJsonObject(dict) ? dict : {}, structural, element, {
2416
+ plain,
2417
+ dataKeys: plain ? GEPHI_NODE_DISPLAY_KEYS : undefined,
2418
+ });
2384
2419
  }
2385
2420
  catch (err) {
2386
2421
  ctx.report.recordError(err, { element: String(id) });
@@ -3322,6 +3357,7 @@ export const jsonImporter = Object.freeze({
3322
3357
  "nodeIdKey",
3323
3358
  "nodesPath",
3324
3359
  "oboIds",
3360
+ "sigmaSettings",
3325
3361
  "sourceKey",
3326
3362
  "targetKey",
3327
3363
  "typedefs",