@graphty/graph-io 0.3.48 → 0.3.49
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/chunks/{approximations-C2riR4NT.js → approximations-Bzn3L-je.js} +2 -2
- package/dist/chunks/{approximations-C2riR4NT.js.map → approximations-Bzn3L-je.js.map} +1 -1
- package/dist/chunks/bends-BGXjv_U4.js +129 -0
- package/dist/chunks/bends-BGXjv_U4.js.map +1 -0
- package/dist/chunks/{block-Cu22ewuS.js → block-iptrlMBb.js} +906 -164
- package/dist/chunks/block-iptrlMBb.js.map +1 -0
- package/dist/chunks/choose-CczZJaX_.js +717 -0
- package/dist/chunks/choose-CczZJaX_.js.map +1 -0
- package/dist/chunks/{codes-CV_Bhcyi.js → codes-BE2xir2k.js} +6 -2
- package/dist/chunks/codes-BE2xir2k.js.map +1 -0
- package/dist/chunks/{constants-D0LqcsLJ.js → constants-CKkYLPtt.js} +2 -2
- package/dist/chunks/{constants-D0LqcsLJ.js.map → constants-CKkYLPtt.js.map} +1 -1
- package/dist/chunks/{context-cgmmOxZ2.js → context-C3p0RQxR.js} +5 -4
- package/dist/chunks/{context-cgmmOxZ2.js.map → context-C3p0RQxR.js.map} +1 -1
- package/dist/chunks/{convert-BcQ8_jMo.js → convert-Ct2zelbQ.js} +7 -2
- package/dist/chunks/convert-Ct2zelbQ.js.map +1 -0
- package/dist/chunks/{credentials-BiQsnMTb.js → credentials-DXHx7nwR.js} +16 -14
- package/dist/chunks/credentials-DXHx7nwR.js.map +1 -0
- package/dist/chunks/{cx-export-BEeF6ymo.js → cx-export-Bt6NoqTQ.js} +3 -3
- package/dist/chunks/{cx-export-BEeF6ymo.js.map → cx-export-Bt6NoqTQ.js.map} +1 -1
- package/dist/chunks/descriptor-B28U25x4.js +60 -0
- package/dist/chunks/descriptor-B28U25x4.js.map +1 -0
- package/dist/chunks/{descriptor-BJ-W0Jd-.js → descriptor-DLA5kINx.js} +7 -2
- package/dist/chunks/descriptor-DLA5kINx.js.map +1 -0
- package/dist/chunks/{emit-CD8xnY8s.js → emit-BwHQkZle.js} +1660 -133
- package/dist/chunks/emit-BwHQkZle.js.map +1 -0
- package/dist/chunks/{escape-DH2Egt-l.js → escape-CuCIzNMB.js} +8 -8
- package/dist/chunks/{escape-DH2Egt-l.js.map → escape-CuCIzNMB.js.map} +1 -1
- package/dist/chunks/{export-CZ7VRm4I.js → export-Cha4dRFz.js} +45 -387
- package/dist/chunks/export-Cha4dRFz.js.map +1 -0
- package/dist/chunks/{exporter-Dcw7Ldtq.js → exporter-BP6otMO6.js} +6 -6
- package/dist/chunks/{exporter-Dcw7Ldtq.js.map → exporter-BP6otMO6.js.map} +1 -1
- package/dist/chunks/{exporter-bxxjOrDZ.js → exporter-D2CETOMK.js} +1222 -156
- package/dist/chunks/exporter-D2CETOMK.js.map +1 -0
- package/dist/chunks/{exporter-BIdaoIgh.js → exporter-D9yMtocA.js} +7 -7
- package/dist/chunks/{exporter-BIdaoIgh.js.map → exporter-D9yMtocA.js.map} +1 -1
- package/dist/chunks/{exporter-DtVU80Fa.js → exporter-_jrBTnos.js} +9 -8
- package/dist/chunks/{exporter-DtVU80Fa.js.map → exporter-_jrBTnos.js.map} +1 -1
- package/dist/chunks/{exporter-ChjL5fmP.js → exporter-nDfxIK5D.js} +9 -8
- package/dist/chunks/{exporter-ChjL5fmP.js.map → exporter-nDfxIK5D.js.map} +1 -1
- package/dist/chunks/format-BXiAb-1h.js +408 -0
- package/dist/chunks/format-BXiAb-1h.js.map +1 -0
- package/dist/chunks/{generic-CP6YD34u.js → generic-ymWCETAJ.js} +387 -31
- package/dist/chunks/generic-ymWCETAJ.js.map +1 -0
- package/dist/chunks/{importer-e3huMZbm.js → importer-B92x1xY5.js} +14 -10
- package/dist/chunks/importer-B92x1xY5.js.map +1 -0
- package/dist/chunks/{importer-B87_fmVx.js → importer-CT9mJ1nn.js} +326 -84
- package/dist/chunks/importer-CT9mJ1nn.js.map +1 -0
- package/dist/chunks/{importer-CB_zV5_L.js → importer-DaLTjbds.js} +116 -1102
- package/dist/chunks/importer-DaLTjbds.js.map +1 -0
- package/dist/chunks/{importer-DPZDN40-.js → importer-GREKMdIf.js} +25 -17
- package/dist/chunks/importer-GREKMdIf.js.map +1 -0
- package/dist/chunks/{importer-Bji2MeWr.js → importer-PqaaKKnY.js} +13 -10
- package/dist/chunks/{importer-Bji2MeWr.js.map → importer-PqaaKKnY.js.map} +1 -1
- package/dist/chunks/{importer-Cyy6UseH.js → importer-Vn5QvmmJ.js} +66 -13
- package/dist/chunks/importer-Vn5QvmmJ.js.map +1 -0
- package/dist/chunks/{importer-CVT-JyDE.js → importer-vRq4h3j5.js} +1469 -356
- package/dist/chunks/importer-vRq4h3j5.js.map +1 -0
- package/dist/chunks/{input-Ccg9I22A.js → input-CAxt_aV-.js} +4 -4
- package/dist/chunks/{input-Ccg9I22A.js.map → input-CAxt_aV-.js.map} +1 -1
- package/dist/chunks/{json-elements-By172SVq.js → json-elements-Cq76WjnZ.js} +4 -4
- package/dist/chunks/{json-elements-By172SVq.js.map → json-elements-Cq76WjnZ.js.map} +1 -1
- package/dist/chunks/{lexicon-u2SI5xcx.js → lexicon-Clf4QIyl.js} +282 -74
- package/dist/chunks/lexicon-Clf4QIyl.js.map +1 -0
- package/dist/chunks/{ontology-export-BwgMyuF0.js → ontology-export-OMo91mb0.js} +4 -4
- package/dist/chunks/{ontology-export-BwgMyuF0.js.map → ontology-export-OMo91mb0.js.map} +1 -1
- package/dist/chunks/{records-Cgvxz-Vx.js → records-NJiYvekn.js} +2 -2
- package/dist/chunks/{records-Cgvxz-Vx.js.map → records-NJiYvekn.js.map} +1 -1
- package/dist/chunks/{report-CgdsL9Hb.js → report-CwMfYa9J.js} +23 -23
- package/dist/chunks/{report-CgdsL9Hb.js.map → report-CwMfYa9J.js.map} +1 -1
- package/dist/chunks/round-trip-Zm3_ivgq.js +79 -0
- package/dist/chunks/round-trip-Zm3_ivgq.js.map +1 -0
- package/dist/chunks/{sigv4-LkAzsLAu.js → sigv4-EokFic1V.js} +5 -5
- package/dist/chunks/sigv4-EokFic1V.js.map +1 -0
- package/dist/chunks/{styles-CaABMoO1.js → styles-CCs214_3.js} +1237 -138
- package/dist/chunks/styles-CCs214_3.js.map +1 -0
- package/dist/chunks/styles-Cm62yyQX.js +2812 -0
- package/dist/chunks/styles-Cm62yyQX.js.map +1 -0
- package/dist/chunks/styles-DPQQIig4.js +1928 -0
- package/dist/chunks/styles-DPQQIig4.js.map +1 -0
- package/dist/chunks/{styles-yed-Cs1nmrjn.js → styles-yed-UMFdNqze.js} +503 -172
- package/dist/chunks/styles-yed-UMFdNqze.js.map +1 -0
- package/dist/chunks/{text-BuKQVMz2.js → text-ystE2bYi.js} +2 -2
- package/dist/chunks/{text-BuKQVMz2.js.map → text-ystE2bYi.js.map} +1 -1
- package/dist/csv.js +7 -7
- package/dist/cx.js +2 -2
- package/dist/cx2.js +2 -2
- package/dist/cys.js +1 -1
- package/dist/dot.js +5 -4
- package/dist/dot.js.map +1 -1
- package/dist/gexf.js +42 -12
- package/dist/gexf.js.map +1 -1
- package/dist/gml.js +847 -193
- package/dist/gml.js.map +1 -1
- package/dist/graph-io.js +232 -220
- package/dist/graph-io.js.map +1 -1
- package/dist/graphml.js +3 -3
- package/dist/json.js +3 -2
- package/dist/neo4j.js +6 -6
- package/dist/obo.js +1 -1
- package/dist/pajek.js +1 -1
- package/dist/positions.js +45 -3
- package/dist/positions.js.map +1 -1
- package/dist/sources-cypher.js +138 -23
- package/dist/sources-cypher.js.map +1 -1
- package/dist/sources-ndex.js +2 -2
- package/dist/sources-rest.js +16 -6
- package/dist/sources-rest.js.map +1 -1
- package/dist/sources-sparql.d.ts +1 -0
- package/dist/sources-sparql.js +405 -0
- package/dist/sources-sparql.js.map +1 -0
- package/dist/src/formats/cx/importer.d.ts.map +1 -1
- package/dist/src/formats/cx/importer.js +5 -1
- package/dist/src/formats/cx/importer.js.map +1 -1
- package/dist/src/formats/cx/styles.d.ts +24 -1
- package/dist/src/formats/cx/styles.d.ts.map +1 -1
- package/dist/src/formats/cx/styles.js +117 -11
- package/dist/src/formats/cx/styles.js.map +1 -1
- package/dist/src/formats/cx2/importer.d.ts.map +1 -1
- package/dist/src/formats/cx2/importer.js +1 -0
- package/dist/src/formats/cx2/importer.js.map +1 -1
- package/dist/src/formats/cx2/styles.d.ts.map +1 -1
- package/dist/src/formats/cx2/styles.js +3 -1
- package/dist/src/formats/cx2/styles.js.map +1 -1
- package/dist/src/formats/cys/importer.d.ts.map +1 -1
- package/dist/src/formats/cys/importer.js +1 -0
- package/dist/src/formats/cys/importer.js.map +1 -1
- package/dist/src/formats/cys/styles.d.ts +2 -0
- package/dist/src/formats/cys/styles.d.ts.map +1 -1
- package/dist/src/formats/cys/styles.js +15 -7
- package/dist/src/formats/cys/styles.js.map +1 -1
- package/dist/src/formats/dot/drawing.d.ts +98 -0
- package/dist/src/formats/dot/drawing.d.ts.map +1 -0
- package/dist/src/formats/dot/drawing.js +734 -0
- package/dist/src/formats/dot/drawing.js.map +1 -0
- package/dist/src/formats/dot/importer.d.ts.map +1 -1
- package/dist/src/formats/dot/importer.js +108 -31
- package/dist/src/formats/dot/importer.js.map +1 -1
- package/dist/src/formats/dot/label-places.d.ts +34 -0
- package/dist/src/formats/dot/label-places.d.ts.map +1 -0
- package/dist/src/formats/dot/label-places.js +179 -0
- package/dist/src/formats/dot/label-places.js.map +1 -0
- package/dist/src/formats/dot/record.d.ts +50 -0
- package/dist/src/formats/dot/record.d.ts.map +1 -0
- package/dist/src/formats/dot/record.js +275 -0
- package/dist/src/formats/dot/record.js.map +1 -0
- package/dist/src/formats/dot/styles.d.ts +62 -2
- package/dist/src/formats/dot/styles.d.ts.map +1 -1
- package/dist/src/formats/dot/styles.js +1454 -119
- package/dist/src/formats/dot/styles.js.map +1 -1
- package/dist/src/formats/gexf/dialog-metrics.d.ts +15 -0
- package/dist/src/formats/gexf/dialog-metrics.d.ts.map +1 -0
- package/dist/src/formats/gexf/dialog-metrics.js +59 -0
- package/dist/src/formats/gexf/dialog-metrics.js.map +1 -0
- package/dist/src/formats/gexf/importer.d.ts +7 -0
- package/dist/src/formats/gexf/importer.d.ts.map +1 -1
- package/dist/src/formats/gexf/importer.js +41 -5
- package/dist/src/formats/gexf/importer.js.map +1 -1
- package/dist/src/formats/gexf/preview.d.ts +77 -0
- package/dist/src/formats/gexf/preview.d.ts.map +1 -0
- package/dist/src/formats/gexf/preview.js +191 -0
- package/dist/src/formats/gexf/preview.js.map +1 -0
- package/dist/src/formats/gexf/schema.d.ts.map +1 -1
- package/dist/src/formats/gexf/schema.js +2 -1
- package/dist/src/formats/gexf/schema.js.map +1 -1
- package/dist/src/formats/gexf/styles.d.ts +58 -31
- package/dist/src/formats/gexf/styles.d.ts.map +1 -1
- package/dist/src/formats/gexf/styles.js +848 -225
- package/dist/src/formats/gexf/styles.js.map +1 -1
- package/dist/src/formats/gml/importer.d.ts +5 -2
- package/dist/src/formats/gml/importer.d.ts.map +1 -1
- package/dist/src/formats/gml/importer.js +258 -71
- package/dist/src/formats/gml/importer.js.map +1 -1
- package/dist/src/formats/gml/index.d.ts +1 -1
- package/dist/src/formats/gml/index.d.ts.map +1 -1
- package/dist/src/formats/gml/index.js +1 -1
- package/dist/src/formats/gml/index.js.map +1 -1
- package/dist/src/formats/gml/positions.d.ts +7 -0
- package/dist/src/formats/gml/positions.d.ts.map +1 -1
- package/dist/src/formats/gml/positions.js +29 -7
- package/dist/src/formats/gml/positions.js.map +1 -1
- package/dist/src/formats/gml/styles.d.ts.map +1 -1
- package/dist/src/formats/gml/styles.js +753 -101
- package/dist/src/formats/gml/styles.js.map +1 -1
- package/dist/src/formats/graphml/styles-plain.d.ts.map +1 -1
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- package/dist/src/formats/graphml/styles-plain.js.map +1 -1
- package/dist/src/formats/graphml/styles-yed.d.ts +21 -15
- package/dist/src/formats/graphml/styles-yed.d.ts.map +1 -1
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- package/dist/src/formats/graphml/styles-yed.js.map +1 -1
- package/dist/src/formats/graphml/styles-yfiles3.d.ts +1 -1
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- package/dist/src/formats/graphml/styles-yfiles3.js.map +1 -1
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- package/dist/src/formats/json/index.d.ts +1 -1
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- package/dist/src/formats/json/positions.d.ts +5 -2
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}
|
|
96
|
+
if (term.datatype === `${XSD}boolean`) {
|
|
97
|
+
return term.value === "true" || term.value === "1";
|
|
98
|
+
}
|
|
99
|
+
return term.value;
|
|
100
|
+
}
|
|
101
|
+
function languageMatches(lang, want) {
|
|
102
|
+
return want === "" || lang === "" || lang === want || lang.startsWith(`${want}-`);
|
|
103
|
+
}
|
|
104
|
+
function graphTriples(triples, language, into) {
|
|
105
|
+
const out = into ?? { nodes: /* @__PURE__ */ new Map(), edges: [] };
|
|
106
|
+
for (const { s, p, o } of triples) {
|
|
107
|
+
let attrs = out.nodes.get(s.value);
|
|
108
|
+
if (attrs === void 0) {
|
|
109
|
+
attrs = {};
|
|
110
|
+
out.nodes.set(s.value, attrs);
|
|
111
|
+
}
|
|
112
|
+
if (o.kind === "literal") {
|
|
113
|
+
const key = localName(p);
|
|
114
|
+
if (languageMatches(o.lang, language) && !(key in attrs)) {
|
|
115
|
+
attrs[key] = literalValue(o);
|
|
116
|
+
}
|
|
117
|
+
} else {
|
|
118
|
+
out.edges.push({ source: s.value, target: o.value, type: localName(p), predicate: p });
|
|
119
|
+
}
|
|
120
|
+
}
|
|
121
|
+
return out;
|
|
122
|
+
}
|
|
123
|
+
function canonicalTriple(t) {
|
|
124
|
+
const o = t.o.kind === "literal" ? JSON.stringify([t.o.value, t.o.lang, t.o.datatype]) : t.o.value;
|
|
125
|
+
return `${t.s.value} ${t.p} ${o}`;
|
|
126
|
+
}
|
|
127
|
+
const NOT_IRI = /[\s<>"{}|^`\\]/;
|
|
128
|
+
const LANGUAGE = /^[a-z]{1,8}(-[a-z\d]{1,8})*$/i;
|
|
129
|
+
function bare(query) {
|
|
130
|
+
return query.replaceAll(/<[^<>\s]*>/g, "<>").replaceAll(/"""[\s\S]*?"""|'''[\s\S]*?'''|"(?:[^"\\\n]|\\.)*"|'(?:[^'\\\n]|\\.)*'/g, '""').replaceAll(/#[^\n]*/g, "");
|
|
131
|
+
}
|
|
132
|
+
function readQuery(query) {
|
|
133
|
+
const text = bare(query);
|
|
134
|
+
const form = /\b(CONSTRUCT|DESCRIBE|SELECT|ASK)\b/i.exec(text)?.[1]?.toLowerCase() ?? null;
|
|
135
|
+
const tail = text.slice(text.lastIndexOf("}") + 1);
|
|
136
|
+
let templateVars = [];
|
|
137
|
+
if (form === "construct") {
|
|
138
|
+
const template = /\bCONSTRUCT\s*\{([^}]*)\}/i.exec(text)?.[1] ?? "";
|
|
139
|
+
templateVars = [...new Set(template.match(/[?$]\w+/g) ?? [])].map((v) => `?${v.slice(1)}`);
|
|
140
|
+
}
|
|
141
|
+
return {
|
|
142
|
+
form,
|
|
143
|
+
ownLimit: /\b(LIMIT|OFFSET)\b/i.test(tail),
|
|
144
|
+
ordered: /\bORDER\s+BY\b/i.test(tail),
|
|
145
|
+
templateVars
|
|
146
|
+
};
|
|
147
|
+
}
|
|
148
|
+
function pagedQuery(query, shape, limit, offset) {
|
|
149
|
+
const order = shape.ordered || shape.templateVars.length === 0 ? "" : `
|
|
150
|
+
ORDER BY ${shape.templateVars.join(" ")}`;
|
|
151
|
+
const skip = offset > 0 ? ` OFFSET ${String(offset)}` : "";
|
|
152
|
+
return `${query.trimEnd()}${order}
|
|
153
|
+
LIMIT ${String(limit)}${skip}`;
|
|
154
|
+
}
|
|
155
|
+
function iriTerm(id) {
|
|
156
|
+
const text = String(id);
|
|
157
|
+
return /^[a-z][\w+.-]*:/i.test(text) && !NOT_IRI.test(text) ? `<${text}>` : null;
|
|
158
|
+
}
|
|
159
|
+
function filters(filter) {
|
|
160
|
+
const { language, predicates } = filter;
|
|
161
|
+
const lang = language === "" ? "" : ` FILTER(!isLiteral(?o) || lang(?o) = "" || langMatches(lang(?o), "${language}"))`;
|
|
162
|
+
const along = predicates.map((p) => `STRSTARTS(STR(?p), "${p}")`).join(" || ");
|
|
163
|
+
return predicates.length === 0 ? lang : `${lang} FILTER(isLiteral(?o) || ${along})`;
|
|
164
|
+
}
|
|
165
|
+
function validLanguage(language) {
|
|
166
|
+
return LANGUAGE.test(language);
|
|
167
|
+
}
|
|
168
|
+
function allQuery(filter, limit, offset) {
|
|
169
|
+
return pagedQuery(
|
|
170
|
+
`CONSTRUCT { ?s ?p ?o } WHERE { ?s ?p ?o .${filters(filter)} }`,
|
|
171
|
+
{ ordered: false, templateVars: ["?s", "?p", "?o"] },
|
|
172
|
+
limit,
|
|
173
|
+
offset
|
|
174
|
+
);
|
|
175
|
+
}
|
|
176
|
+
function aroundQuery(iris, direction, filter, limit, offset) {
|
|
177
|
+
const values = iris.join(" ");
|
|
178
|
+
const out = `{ VALUES ?s { ${values} } ?s ?p ?o .${filters(filter)} }`;
|
|
179
|
+
const inward = `{ VALUES ?o { ${values} } ?s ?p ?o .${filters({ ...filter, language: "" })} }`;
|
|
180
|
+
let where = `${out} UNION ${inward}`;
|
|
181
|
+
if (direction !== "both") {
|
|
182
|
+
where = direction === "out" ? out : inward;
|
|
183
|
+
}
|
|
184
|
+
return pagedQuery(
|
|
185
|
+
`CONSTRUCT { ?s ?p ?o } WHERE { ${where} }`,
|
|
186
|
+
{ ordered: false, templateVars: ["?s", "?p", "?o"] },
|
|
187
|
+
limit,
|
|
188
|
+
offset
|
|
189
|
+
);
|
|
190
|
+
}
|
|
191
|
+
const DEFAULT_PAGE_SIZE = 1e3;
|
|
192
|
+
const DEFAULT_EXPAND_LIMIT = 500;
|
|
193
|
+
const MAX_DEPTH = 10;
|
|
194
|
+
const ACCEPT_TRIPLES = "application/n-triples, text/plain;q=0.9";
|
|
195
|
+
async function send(ctx, query) {
|
|
196
|
+
throwIfAborted(ctx.signal);
|
|
197
|
+
const response = await ctx.fetch(ctx.endpoint ?? "", {
|
|
198
|
+
method: "POST",
|
|
199
|
+
idempotent: true,
|
|
200
|
+
headers: { Accept: ACCEPT_TRIPLES, "Content-Type": "application/x-www-form-urlencoded" },
|
|
201
|
+
body: new URLSearchParams({ query }).toString(),
|
|
202
|
+
allowStatus: [400]
|
|
203
|
+
});
|
|
204
|
+
if (response.status === 400) {
|
|
205
|
+
const text = (await response.text()).trim().slice(0, 500);
|
|
206
|
+
failOn(ctx.report, "E_SOURCE_QUERY", "the endpoint refused the query", {
|
|
207
|
+
serverCode: null,
|
|
208
|
+
line: null,
|
|
209
|
+
column: null,
|
|
210
|
+
serverMessage: text === "" ? null : text
|
|
211
|
+
});
|
|
212
|
+
}
|
|
213
|
+
const contentType = response.headers.get("content-type");
|
|
214
|
+
const notTriples = () => failOn(ctx.report, "E_SOURCE_RESPONSE", "the endpoint did not answer N-Triples", {
|
|
215
|
+
expected: "n-triples",
|
|
216
|
+
contentType
|
|
217
|
+
});
|
|
218
|
+
if (contentType !== null && /html|json|xml/i.test(contentType)) {
|
|
219
|
+
notTriples();
|
|
220
|
+
}
|
|
221
|
+
const { triples, badLine } = parseNTriples(await response.text());
|
|
222
|
+
if (badLine !== null) {
|
|
223
|
+
notTriples();
|
|
224
|
+
}
|
|
225
|
+
return triples;
|
|
226
|
+
}
|
|
227
|
+
function integer(value, name, max, ctx) {
|
|
228
|
+
if (!Number.isInteger(value) || value < 1 || value > max) {
|
|
229
|
+
failOn(ctx.report, "E_SOURCE_PARAM", `${name} is an integer from 1 to ${String(max)}`, {
|
|
230
|
+
name,
|
|
231
|
+
reason: "range"
|
|
232
|
+
});
|
|
233
|
+
}
|
|
234
|
+
return value;
|
|
235
|
+
}
|
|
236
|
+
function languageOf(params, ctx) {
|
|
237
|
+
const language = params.language ?? "";
|
|
238
|
+
if (language !== "" && !validLanguage(language)) {
|
|
239
|
+
failOn(ctx.report, "E_SOURCE_PARAM", "language is a language tag", { name: "language", reason: "type" });
|
|
240
|
+
}
|
|
241
|
+
return language.toLowerCase();
|
|
242
|
+
}
|
|
243
|
+
function predicatesOf(params, ctx) {
|
|
244
|
+
const list = params.predicates ?? [];
|
|
245
|
+
const prefixes = typeof list === "string" ? [list] : list;
|
|
246
|
+
for (const p of prefixes) {
|
|
247
|
+
if (typeof p !== "string" || iriTerm(p) === null) {
|
|
248
|
+
failOn(ctx.report, "E_SOURCE_PARAM", "predicates are IRI prefixes", { name: "predicates", reason: "iri" });
|
|
249
|
+
}
|
|
250
|
+
}
|
|
251
|
+
return prefixes;
|
|
252
|
+
}
|
|
253
|
+
function irisOf(ids, name, ctx) {
|
|
254
|
+
if (ids === void 0 || ids.length === 0) {
|
|
255
|
+
failOn(ctx.report, "E_SOURCE_PARAM", `${name} needs at least one IRI`, { name, reason: "required" });
|
|
256
|
+
}
|
|
257
|
+
return ids.map(
|
|
258
|
+
(id) => iriTerm(id) ?? failOn(ctx.report, "E_SOURCE_PARAM", `${name}: not an IRI`, { name, reason: "iri" })
|
|
259
|
+
);
|
|
260
|
+
}
|
|
261
|
+
function planOf(params, ctx) {
|
|
262
|
+
const size = integer(params.pageSize ?? DEFAULT_PAGE_SIZE, "pageSize", 1e4, ctx);
|
|
263
|
+
const filter = { language: languageOf(params, ctx), predicates: predicatesOf(params, ctx) };
|
|
264
|
+
const query = params.query?.trim() ?? "";
|
|
265
|
+
const mode = params.mode ?? (query === "" ? "all" : "query");
|
|
266
|
+
if (mode === "neighborhood") {
|
|
267
|
+
const iris = irisOf(params.ids, "ids", ctx);
|
|
268
|
+
return { at: (offset) => aroundQuery(iris, "both", filter, size, offset), paged: true };
|
|
269
|
+
}
|
|
270
|
+
if (mode === "all") {
|
|
271
|
+
return { at: (offset) => allQuery(filter, size, offset), paged: true };
|
|
272
|
+
}
|
|
273
|
+
if (query === "") {
|
|
274
|
+
failOn(ctx.report, "E_SOURCE_PARAM", "mode query needs a query", { name: "query", reason: "required" });
|
|
275
|
+
}
|
|
276
|
+
const shape = readQuery(query);
|
|
277
|
+
if (shape.form !== "construct" && shape.form !== "describe") {
|
|
278
|
+
failOn(ctx.report, "E_SOURCE_PARAM", "the query must be CONSTRUCT or DESCRIBE", {
|
|
279
|
+
name: "query",
|
|
280
|
+
reason: "form"
|
|
281
|
+
});
|
|
282
|
+
}
|
|
283
|
+
if (shape.ownLimit) {
|
|
284
|
+
return { at: () => query, paged: false };
|
|
285
|
+
}
|
|
286
|
+
return { at: (offset) => pagedQuery(query, shape, size, offset), paged: true };
|
|
287
|
+
}
|
|
288
|
+
function write(graphed, sink, ctx) {
|
|
289
|
+
const { report } = ctx;
|
|
290
|
+
if (sink.edgeCount === 0) {
|
|
291
|
+
sink.setDirected(true);
|
|
292
|
+
}
|
|
293
|
+
for (const [id, attrs] of graphed.nodes) {
|
|
294
|
+
try {
|
|
295
|
+
sink.addNodeRecord(id, attrs);
|
|
296
|
+
report.counts.nodes++;
|
|
297
|
+
} catch (err) {
|
|
298
|
+
report.recordError(err, { element: id });
|
|
299
|
+
report.counts.skippedNodes++;
|
|
300
|
+
}
|
|
301
|
+
}
|
|
302
|
+
for (const { source, target, ...attrs } of graphed.edges) {
|
|
303
|
+
try {
|
|
304
|
+
sink.addEdgeRecord(source, target, attrs, null);
|
|
305
|
+
report.counts.edges++;
|
|
306
|
+
} catch (err) {
|
|
307
|
+
report.recordError(err, { element: `${source} -> ${target}` });
|
|
308
|
+
report.counts.skippedEdges++;
|
|
309
|
+
}
|
|
310
|
+
}
|
|
311
|
+
}
|
|
312
|
+
function hashOf(triples) {
|
|
313
|
+
return sha256Hex(triples.map(canonicalTriple).sort().join("\n"));
|
|
314
|
+
}
|
|
315
|
+
async function load(params, sink, ctx) {
|
|
316
|
+
const plan = planOf(params, ctx);
|
|
317
|
+
const size = params.pageSize ?? DEFAULT_PAGE_SIZE;
|
|
318
|
+
const start = Number(ctx.cursor?.offset ?? 0);
|
|
319
|
+
const language = languageOf(params, ctx);
|
|
320
|
+
let offset = start;
|
|
321
|
+
let next = null;
|
|
322
|
+
let contentHash;
|
|
323
|
+
for (; ; ) {
|
|
324
|
+
const triples = await send(ctx, plan.at(offset));
|
|
325
|
+
if (offset === 0) {
|
|
326
|
+
contentHash = await hashOf(triples);
|
|
327
|
+
}
|
|
328
|
+
write(graphTriples(triples, language), sink, ctx);
|
|
329
|
+
const { counts } = ctx.report;
|
|
330
|
+
ctx.progress(counts.nodes + counts.edges, void 0, "items");
|
|
331
|
+
if (!plan.paged || triples.length === 0) {
|
|
332
|
+
next = null;
|
|
333
|
+
break;
|
|
334
|
+
}
|
|
335
|
+
offset += size;
|
|
336
|
+
next = { offset };
|
|
337
|
+
if (ctx.limits.reached()) {
|
|
338
|
+
break;
|
|
339
|
+
}
|
|
340
|
+
}
|
|
341
|
+
return ctx.finish({ next, ...contentHash === void 0 ? {} : { validators: { contentHash } } });
|
|
342
|
+
}
|
|
343
|
+
async function expand(request, sink, ctx) {
|
|
344
|
+
const direction = request.direction ?? "both";
|
|
345
|
+
if (!["out", "in", "both"].includes(direction)) {
|
|
346
|
+
failOn(ctx.report, "E_SOURCE_PARAM", "direction must be out, in or both", {
|
|
347
|
+
name: "direction",
|
|
348
|
+
reason: "enum"
|
|
349
|
+
});
|
|
350
|
+
}
|
|
351
|
+
const depth = integer(request.depth ?? 1, "depth", MAX_DEPTH, ctx);
|
|
352
|
+
const limit = integer(request.limit ?? DEFAULT_EXPAND_LIMIT, "limit", Number.MAX_SAFE_INTEGER, ctx);
|
|
353
|
+
const language = languageOf(request.params, ctx);
|
|
354
|
+
const filter = { language, predicates: predicatesOf(request.params, ctx) };
|
|
355
|
+
const types = request.relationshipTypes === void 0 ? null : new Set(request.relationshipTypes);
|
|
356
|
+
const offset = depth === 1 ? Number(ctx.cursor?.offset ?? 0) : 0;
|
|
357
|
+
const seen = new Set(request.ids.map(String));
|
|
358
|
+
let frontier = irisOf(request.ids, "ids", ctx);
|
|
359
|
+
let next = null;
|
|
360
|
+
const graphed = { nodes: /* @__PURE__ */ new Map(), edges: [] };
|
|
361
|
+
for (let hop = 0; hop < depth && frontier.length > 0; hop++) {
|
|
362
|
+
const triples = await send(ctx, aroundQuery(frontier, direction, filter, limit, offset));
|
|
363
|
+
const before = graphed.edges.length;
|
|
364
|
+
graphTriples(triples, language, graphed);
|
|
365
|
+
if (types !== null) {
|
|
366
|
+
const kept = graphed.edges.slice(before).filter((e) => types.has(e.type) || types.has(e.predicate));
|
|
367
|
+
graphed.edges.splice(before, Infinity, ...kept);
|
|
368
|
+
}
|
|
369
|
+
if (depth === 1 && triples.length > 0) {
|
|
370
|
+
next = { offset: offset + limit };
|
|
371
|
+
}
|
|
372
|
+
const reached = graphed.edges.slice(before).flatMap((e) => [e.source, e.target]);
|
|
373
|
+
frontier = [...new Set(reached)].filter((id) => !seen.has(id)).flatMap((id) => {
|
|
374
|
+
seen.add(id);
|
|
375
|
+
const term = iriTerm(id);
|
|
376
|
+
return term === null ? [] : [term];
|
|
377
|
+
});
|
|
378
|
+
}
|
|
379
|
+
write(graphed, sink, ctx);
|
|
380
|
+
return ctx.finish({ next });
|
|
381
|
+
}
|
|
382
|
+
const sparqlSource = defineSource({
|
|
383
|
+
id: SPARQL_SOURCE_ID,
|
|
384
|
+
descriptor: SPARQL_DESCRIPTOR,
|
|
385
|
+
import: load,
|
|
386
|
+
expand,
|
|
387
|
+
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{"version":3,"file":"sources-sparql.js","sources":["../src/sources/sparql/ntriples.ts","../src/sources/sparql/query.ts","../src/sources/sparql/index.ts"],"sourcesContent":["/**\n * Reading the N-Triples a CONSTRUCT or DESCRIBE answers, and turning triples into nodes and edges:\n * an IRI or blank-node object is an edge from the subject, a literal is an attribute of the\n * subject named by the predicate's local name.\n */\n\n/** One RDF term. */\nexport type Term =\n | { readonly kind: \"iri\"; readonly value: string }\n | { readonly kind: \"bnode\"; readonly value: string }\n | { readonly kind: \"literal\"; readonly value: string; readonly lang: string; readonly datatype: string };\n\n/** One triple. */\nexport interface Triple {\n /** The subject: an IRI or a blank node. */\n readonly s: Term;\n /** The predicate IRI. */\n readonly p: string;\n /** The object. */\n readonly o: Term;\n}\n\n/** One term at the sticky position: an IRI, a blank node, or a literal with its tag or type. */\nconst TERM = /\\s*(?:<([^<>]*)>|_:([\\w.-]*[\\w-])|\"((?:[^\"\\\\]|\\\\.)*)\"(?:@([A-Za-z][\\w-]*)|\\^\\^<([^<>]*)>)?)/y;\n\n/** The end of a statement: a dot, then an optional comment. */\nconst END = /\\s*\\.\\s*(?:#.*)?$/y;\n\n/** The XSD namespace. */\nconst XSD = \"http://www.w3.org/2001/XMLSchema#\";\n\n/** The XSD numeric types, read as numbers. */\nconst NUMERIC: ReadonlySet<string> = new Set(\n [\n \"integer\",\n \"decimal\",\n \"double\",\n \"float\",\n \"int\",\n \"long\",\n \"short\",\n \"byte\",\n \"nonNegativeInteger\",\n \"nonPositiveInteger\",\n \"positiveInteger\",\n \"negativeInteger\",\n \"unsignedInt\",\n \"unsignedLong\",\n \"unsignedShort\",\n \"unsignedByte\",\n ].map((t) => XSD + t),\n);\n\n/**\n * Undo N-Triples escapes.\n * @param text - escaped text\n * @returns the text\n */\nfunction unescape(text: string): string {\n if (!text.includes(\"\\\\\")) {\n return text;\n }\n const simple: Readonly<Record<string, string>> = { t: \"\\t\", b: \"\\b\", n: \"\\n\", r: \"\\r\", f: \"\\f\" };\n return text.replaceAll(\n /\\\\(?:u([\\da-fA-F]{4})|U([\\da-fA-F]{8})|(.))/g,\n (_m, u4?: string, u8?: string, c?: string) => {\n const hex = u4 ?? u8;\n if (hex !== undefined) {\n return String.fromCodePoint(Number.parseInt(hex, 16));\n }\n return simple[c ?? \"\"] ?? c ?? \"\";\n },\n );\n}\n\n/**\n * Read one term at `at`.\n * @param line - the line\n * @param at - where to start\n * @returns the term and where it ended, or null when there is none\n */\nfunction readTerm(line: string, at: number): { term: Term; end: number } | null {\n TERM.lastIndex = at;\n const m = TERM.exec(line);\n if (m === null) {\n return null;\n }\n const [, iri, bnode, lexical, lang, datatype] = m;\n let term: Term;\n if (iri !== undefined) {\n term = { kind: \"iri\", value: unescape(iri) };\n } else if (bnode === undefined) {\n term = {\n kind: \"literal\",\n value: unescape(lexical ?? \"\"),\n lang: lang?.toLowerCase() ?? \"\",\n datatype: datatype ?? \"\",\n };\n } else {\n term = { kind: \"bnode\", value: `_:${bnode}` };\n }\n return { term, end: TERM.lastIndex };\n}\n\n/**\n * Parse N-Triples.\n * @param text - the document\n * @returns the triples, or the 1-based number of the first line that is not a triple\n */\nexport function parseNTriples(text: string): { triples: Triple[]; badLine: number | null } {\n const triples: Triple[] = [];\n const lines = text.split(/\\r?\\n/);\n for (let i = 0; i < lines.length; i++) {\n const line = lines[i];\n const trimmed = line.trim();\n if (trimmed === \"\" || trimmed.startsWith(\"#\")) {\n continue;\n }\n const s = readTerm(line, 0);\n const p = s === null ? null : readTerm(line, s.end);\n const o = p === null ? null : readTerm(line, p.end);\n END.lastIndex = o?.end ?? 0;\n if (\n s === null ||\n p === null ||\n o === null ||\n s.term.kind === \"literal\" ||\n p.term.kind !== \"iri\" ||\n !END.test(line)\n ) {\n return { triples, badLine: i + 1 };\n }\n triples.push({ s: s.term, p: p.term.value, o: o.term });\n }\n return { triples, badLine: null };\n}\n\n/**\n * The local name of an IRI: what follows its last `#`, else its last `/`, else its last `:`.\n * @param iri - the IRI\n * @returns the local name, or the whole IRI when nothing follows\n */\nexport function localName(iri: string): string {\n const cut = Math.max(iri.lastIndexOf(\"#\"), iri.lastIndexOf(\"/\"), iri.lastIndexOf(\":\"));\n const name = iri.slice(cut + 1);\n return name === \"\" ? iri : name;\n}\n\n/**\n * A literal's value: numbers and booleans as such, everything else as its text.\n * @param term - the literal\n * @returns the value\n */\nfunction literalValue(term: Extract<Term, { kind: \"literal\" }>): string | number | boolean {\n if (NUMERIC.has(term.datatype)) {\n const n = Number(term.value);\n return Number.isFinite(n) ? n : term.value;\n }\n if (term.datatype === `${XSD}boolean`) {\n return term.value === \"true\" || term.value === \"1\";\n }\n return term.value;\n}\n\n/**\n * Whether a literal's language tag passes a language filter (SPARQL's langMatches, plus untagged).\n * @param lang - the literal's tag, lowercase\n * @param want - the filter, lowercase, or \"\" for none\n * @returns whether to keep it\n */\nfunction languageMatches(lang: string, want: string): boolean {\n return want === \"\" || lang === \"\" || lang === want || lang.startsWith(`${want}-`);\n}\n\n/** The nodes and edges of some triples. */\nexport interface Graphed {\n /** Each subject's literal attributes, by subject id; a predicate's first value wins. */\n readonly nodes: Map<string, Record<string, string | number | boolean>>;\n /** One edge per IRI or blank-node object. */\n readonly edges: { source: string; target: string; type: string; predicate: string }[];\n}\n\n/**\n * Turn triples into nodes and edges.\n * @param triples - the triples\n * @param language - the language filter, lowercase, or \"\"\n * @param into - nodes and edges to add to\n * @returns the nodes and edges\n */\nexport function graphTriples(triples: readonly Triple[], language: string, into?: Graphed): Graphed {\n const out: Graphed = into ?? { nodes: new Map(), edges: [] };\n for (const { s, p, o } of triples) {\n let attrs = out.nodes.get(s.value);\n if (attrs === undefined) {\n attrs = {};\n out.nodes.set(s.value, attrs);\n }\n if (o.kind === \"literal\") {\n const key = localName(p);\n // ponytail: one value per predicate (the first); a list column if multi-valued literals matter\n if (languageMatches(o.lang, language) && !(key in attrs)) {\n attrs[key] = literalValue(o);\n }\n } else {\n out.edges.push({ source: s.value, target: o.value, type: localName(p), predicate: p });\n }\n }\n return out;\n}\n\n/**\n * One canonical line per triple, for the content hash.\n * @param t - the triple\n * @returns the line\n */\nexport function canonicalTriple(t: Triple): string {\n const o = t.o.kind === \"literal\" ? JSON.stringify([t.o.value, t.o.lang, t.o.datatype]) : t.o.value;\n return `${t.s.value} ${t.p} ${o}`;\n}\n","/**\n * The SPARQL the source sends: the caller's CONSTRUCT or DESCRIBE with the paging the source\n * adds (`ORDER BY` the template's variables, `LIMIT` and `OFFSET`), and the generated queries of\n * \"all\", \"neighborhood\" and expand (`VALUES ?s { ... }`).\n */\n\n/** Characters an IRIREF may not hold. */\nconst NOT_IRI = /[\\s<>\"{}|^`\\\\]/;\n\n/** A language tag a filter may name. */\nconst LANGUAGE = /^[a-z]{1,8}(-[a-z\\d]{1,8})*$/i;\n\n/** The query forms, as the first keyword after the prologue. */\ntype QueryForm = \"construct\" | \"describe\" | \"select\" | \"ask\" | null;\n\n/** What paging the caller's query takes. */\ninterface UserQuery {\n /** Its form. */\n readonly form: QueryForm;\n /** Whether it sets its own LIMIT or OFFSET, so the source sends it as written. */\n readonly ownLimit: boolean;\n /** Whether it orders its solutions itself. */\n readonly ordered: boolean;\n /** The variables of a CONSTRUCT template, in order, for ORDER BY. */\n readonly templateVars: readonly string[];\n}\n\n/**\n * The query with IRIs, strings and comments blanked out, so keywords and braces can be found.\n * @param query - the query\n * @returns the bare text\n */\nfunction bare(query: string): string {\n return query\n .replaceAll(/<[^<>\\s]*>/g, \"<>\")\n .replaceAll(/\"\"\"[\\s\\S]*?\"\"\"|'''[\\s\\S]*?'''|\"(?:[^\"\\\\\\n]|\\\\.)*\"|'(?:[^'\\\\\\n]|\\\\.)*'/g, '\"\"')\n .replaceAll(/#[^\\n]*/g, \"\");\n}\n\n/**\n * Read what paging a caller's query takes.\n * @param query - the query\n * @returns its form, its own modifiers and its template variables\n */\nexport function readQuery(query: string): UserQuery {\n const text = bare(query);\n const form = /\\b(CONSTRUCT|DESCRIBE|SELECT|ASK)\\b/i.exec(text)?.[1]?.toLowerCase() ?? null;\n // the solution modifiers follow the last closing brace (a trailing VALUES block is not handled)\n const tail = text.slice(text.lastIndexOf(\"}\") + 1);\n let templateVars: string[] = [];\n if (form === \"construct\") {\n const template = /\\bCONSTRUCT\\s*\\{([^}]*)\\}/i.exec(text)?.[1] ?? \"\";\n templateVars = [...new Set(template.match(/[?$]\\w+/g) ?? [])].map((v) => `?${v.slice(1)}`);\n }\n return {\n form: form as QueryForm,\n ownLimit: /\\b(LIMIT|OFFSET)\\b/i.test(tail),\n ordered: /\\bORDER\\s+BY\\b/i.test(tail),\n templateVars,\n };\n}\n\n/**\n * The caller's query with one page's modifiers added.\n * @param query - the query\n * @param shape - what readQuery found\n * @param limit - solutions per page\n * @param offset - solutions to skip\n * @returns the query to send\n */\nexport function pagedQuery(query: string, shape: UserQuery, limit: number, offset: number): string {\n const order = shape.ordered || shape.templateVars.length === 0 ? \"\" : `\\nORDER BY ${shape.templateVars.join(\" \")}`;\n const skip = offset > 0 ? ` OFFSET ${String(offset)}` : \"\";\n return `${query.trimEnd()}${order}\\nLIMIT ${String(limit)}${skip}`;\n}\n\n/**\n * An IRI as a SPARQL term, or null when it cannot be one.\n * @param id - the id\n * @returns `<iri>`, or null\n */\nexport function iriTerm(id: unknown): string | null {\n const text = String(id);\n return /^[a-z][\\w+.-]*:/i.test(text) && !NOT_IRI.test(text) ? `<${text}>` : null;\n}\n\n/** What generated queries keep: literals in a language, edges along some predicates. */\ninterface TripleFilter {\n /** Keep literals tagged with this language or untagged; \"\" keeps every literal. */\n readonly language: string;\n /** Keep edges whose predicate starts with one of these IRIs; empty keeps every edge. */\n readonly predicates: readonly string[];\n}\n\n/**\n * The FILTERs of generated queries, or \"\" for none. Both values are checked by the caller.\n * @param filter - the language and the predicate prefixes\n * @returns the FILTER clauses\n */\nfunction filters(filter: TripleFilter): string {\n const { language, predicates } = filter;\n const lang =\n language === \"\" ? \"\" : ` FILTER(!isLiteral(?o) || lang(?o) = \"\" || langMatches(lang(?o), \"${language}\"))`;\n const along = predicates.map((p) => `STRSTARTS(STR(?p), \"${p}\")`).join(\" || \");\n return predicates.length === 0 ? lang : `${lang} FILTER(isLiteral(?o) || ${along})`;\n}\n\n/**\n * Whether a language tag may go into a FILTER.\n * @param language - the tag\n * @returns whether it is well formed\n */\nexport function validLanguage(language: string): boolean {\n return LANGUAGE.test(language);\n}\n\n/**\n * Mode \"all\": every triple, ordered so pages are stable.\n * @param filter - what to keep\n * @param limit - solutions per page\n * @param offset - solutions to skip\n * @returns the query\n */\nexport function allQuery(filter: TripleFilter, limit: number, offset: number): string {\n return pagedQuery(\n `CONSTRUCT { ?s ?p ?o } WHERE { ?s ?p ?o .${filters(filter)} }`,\n { form: \"construct\", ownLimit: false, ordered: false, templateVars: [\"?s\", \"?p\", \"?o\"] },\n limit,\n offset,\n );\n}\n\n/**\n * The triples around some IRIs: out (`VALUES ?s`), in (`VALUES ?o`) or both.\n * @param iris - the IRIs as terms\n * @param direction - which triples\n * @param filter - what to keep\n * @param limit - solutions per page\n * @param offset - solutions to skip\n * @returns the query\n */\nexport function aroundQuery(\n iris: readonly string[],\n direction: \"out\" | \"in\" | \"both\",\n filter: TripleFilter,\n limit: number,\n offset: number,\n): string {\n const values = iris.join(\" \");\n const out = `{ VALUES ?s { ${values} } ?s ?p ?o .${filters(filter)} }`;\n const inward = `{ VALUES ?o { ${values} } ?s ?p ?o .${filters({ ...filter, language: \"\" })} }`;\n let where = `${out} UNION ${inward}`;\n if (direction !== \"both\") {\n where = direction === \"out\" ? out : inward;\n }\n return pagedQuery(\n `CONSTRUCT { ?s ?p ?o } WHERE { ${where} }`,\n { form: \"construct\", ownLimit: false, ordered: false, templateVars: [\"?s\", \"?p\", \"?o\"] },\n limit,\n offset,\n );\n}\n","/**\n * `@graphty/graph-io/sources/sparql`: the SPARQL source. It sends CONSTRUCT (or DESCRIBE) queries\n * over the SPARQL 1.1 protocol (a form POST, N-Triples back) and reads the triples as a graph: an\n * IRI or blank-node object is an edge from the subject (`type` is the predicate's local name,\n * `predicate` the full IRI), a literal is an attribute of the subject named by the predicate's\n * local name. Node ids are the IRIs.\n *\n * - Paging: the source adds `ORDER BY` (the template's variables) and `LIMIT` / `OFFSET` to the\n * caller's query, unless it sets its own; a load stops between pages at a cap and hands back\n * `{ offset }` as its cursor. A page is `pageSize` solutions, so its triple count varies; the\n * first empty page ends the load.\n * - Expand: the triples of the seeds, `VALUES ?s { ... }` out and `VALUES ?o { ... }` in.\n * - Validate: SHA-256 of the first page's triples.\n *\n * Experimental.\n * @module @graphty/graph-io/sources/sparql\n */\n\nimport { type GraphSink } from \"@graphty/graph-format\";\n\nimport { throwIfAborted } from \"../../common/input.js\";\nimport { type ImportReport } from \"../../types.js\";\nimport { defineSource } from \"../define.js\";\nimport { failOn } from \"../fail.js\";\nimport { SPARQL_SOURCE_ID } from \"../ids.js\";\nimport { sha256Hex } from \"../sigv4.js\";\nimport {\n type ExpandRequest,\n type GraphSource,\n type SourceContext,\n type SourceCursor,\n type SourceFreshness,\n type SourceProbe,\n} from \"../types.js\";\nimport { SPARQL_DESCRIPTOR } from \"./descriptor.js\";\nimport { canonicalTriple, type Graphed, graphTriples, parseNTriples, type Triple } from \"./ntriples.js\";\nimport { type SparqlParams } from \"./params.js\";\nimport { allQuery, aroundQuery, iriTerm, pagedQuery, readQuery, validLanguage } from \"./query.js\";\n\nexport { SPARQL_DESCRIPTOR } from \"./descriptor.js\";\nexport { type SparqlParams } from \"./params.js\";\n\n/** Solutions per page when the params name none. */\nconst DEFAULT_PAGE_SIZE = 1000;\n\n/** Triples per hop of an expansion when the request names no limit. */\nconst DEFAULT_EXPAND_LIMIT = 500;\n\n/** The deepest expansion, as for every built-in source. */\nconst MAX_DEPTH = 10;\n\n/** What CONSTRUCT and DESCRIBE are asked to answer. */\nconst ACCEPT_TRIPLES = \"application/n-triples, text/plain;q=0.9\";\n\n/** One page's query, by offset; `paged` false when the query is sent once, as written. */\ninterface Plan {\n /** The query of the page at an offset. */\n readonly at: (offset: number) => string;\n /** Whether the source pages it. */\n readonly paged: boolean;\n}\n\n/**\n * Send a query and read the answer as N-Triples.\n * @param ctx - the context\n * @param query - the query\n * @returns the triples\n */\nasync function send(ctx: SourceContext, query: string): Promise<Triple[]> {\n throwIfAborted(ctx.signal);\n const response = await ctx.fetch(ctx.endpoint ?? \"\", {\n method: \"POST\",\n idempotent: true,\n headers: { Accept: ACCEPT_TRIPLES, \"Content-Type\": \"application/x-www-form-urlencoded\" },\n body: new URLSearchParams({ query }).toString(),\n allowStatus: [400],\n });\n if (response.status === 400) {\n const text = (await response.text()).trim().slice(0, 500);\n failOn(ctx.report, \"E_SOURCE_QUERY\", \"the endpoint refused the query\", {\n serverCode: null,\n line: null,\n column: null,\n serverMessage: text === \"\" ? null : text,\n });\n }\n const contentType = response.headers.get(\"content-type\");\n const notTriples = (): never =>\n failOn(ctx.report, \"E_SOURCE_RESPONSE\", \"the endpoint did not answer N-Triples\", {\n expected: \"n-triples\",\n contentType,\n });\n if (contentType !== null && /html|json|xml/i.test(contentType)) {\n notTriples();\n }\n const { triples, badLine } = parseNTriples(await response.text());\n if (badLine !== null) {\n notTriples();\n }\n return triples;\n}\n\n/**\n * A whole-number param, checked.\n * @param value - the value\n * @param name - the param\n * @param max - the largest allowed\n * @param ctx - the context\n * @returns the number\n */\nfunction integer(value: number, name: string, max: number, ctx: SourceContext): number {\n if (!Number.isInteger(value) || value < 1 || value > max) {\n failOn(ctx.report, \"E_SOURCE_PARAM\", `${name} is an integer from 1 to ${String(max)}`, {\n name,\n reason: \"range\",\n });\n }\n return value;\n}\n\n/**\n * The language filter, lowercase and checked, or \"\" for none.\n * @param params - the params\n * @param ctx - the context\n * @returns the tag\n */\nfunction languageOf(params: SparqlParams, ctx: SourceContext): string {\n const language = params.language ?? \"\";\n if (language !== \"\" && !validLanguage(language)) {\n failOn(ctx.report, \"E_SOURCE_PARAM\", \"language is a language tag\", { name: \"language\", reason: \"type\" });\n }\n return language.toLowerCase();\n}\n\n/**\n * The predicate prefixes generated queries follow, checked.\n * @param params - the params\n * @param ctx - the context\n * @returns the prefixes; empty means every predicate\n */\nfunction predicatesOf(params: SparqlParams, ctx: SourceContext): readonly string[] {\n const list = params.predicates ?? [];\n const prefixes = typeof list === \"string\" ? [list] : list;\n for (const p of prefixes) {\n if (typeof p !== \"string\" || iriTerm(p) === null) {\n failOn(ctx.report, \"E_SOURCE_PARAM\", \"predicates are IRI prefixes\", { name: \"predicates\", reason: \"iri\" });\n }\n }\n return prefixes;\n}\n\n/**\n * Seed ids as IRI terms; a blank node or anything else that is not an IRI is refused.\n * @param ids - the ids\n * @param name - the param, for the error\n * @param ctx - the context\n * @returns the terms\n */\nfunction irisOf(ids: readonly unknown[] | undefined, name: string, ctx: SourceContext): string[] {\n if (ids === undefined || ids.length === 0) {\n failOn(ctx.report, \"E_SOURCE_PARAM\", `${name} needs at least one IRI`, { name, reason: \"required\" });\n }\n return ids.map(\n (id) => iriTerm(id) ?? failOn(ctx.report, \"E_SOURCE_PARAM\", `${name}: not an IRI`, { name, reason: \"iri\" }),\n );\n}\n\n/**\n * What a load sends, from its mode.\n * @param params - the params\n * @param ctx - the context\n * @returns the plan\n */\nfunction planOf(params: SparqlParams, ctx: SourceContext): Plan {\n const size = integer(params.pageSize ?? DEFAULT_PAGE_SIZE, \"pageSize\", 10_000, ctx);\n const filter = { language: languageOf(params, ctx), predicates: predicatesOf(params, ctx) };\n const query = params.query?.trim() ?? \"\";\n const mode = params.mode ?? (query === \"\" ? \"all\" : \"query\");\n if (mode === \"neighborhood\") {\n const iris = irisOf(params.ids, \"ids\", ctx);\n return { at: (offset) => aroundQuery(iris, \"both\", filter, size, offset), paged: true };\n }\n if (mode === \"all\") {\n return { at: (offset) => allQuery(filter, size, offset), paged: true };\n }\n if (query === \"\") {\n failOn(ctx.report, \"E_SOURCE_PARAM\", \"mode query needs a query\", { name: \"query\", reason: \"required\" });\n }\n const shape = readQuery(query);\n if (shape.form !== \"construct\" && shape.form !== \"describe\") {\n failOn(ctx.report, \"E_SOURCE_PARAM\", \"the query must be CONSTRUCT or DESCRIBE\", {\n name: \"query\",\n reason: \"form\",\n });\n }\n if (shape.ownLimit) {\n return { at: () => query, paged: false };\n }\n return { at: (offset) => pagedQuery(query, shape, size, offset), paged: true };\n}\n\n/**\n * Write nodes and edges into the sink, counting them on the report.\n * @param graphed - the nodes and edges\n * @param sink - where to write\n * @param ctx - the context\n */\nfunction write(graphed: Graphed, sink: GraphSink, ctx: SourceContext): void {\n const { report } = ctx;\n if (sink.edgeCount === 0) {\n sink.setDirected(true);\n }\n for (const [id, attrs] of graphed.nodes) {\n try {\n sink.addNodeRecord(id, attrs);\n report.counts.nodes++;\n } catch (err) {\n report.recordError(err, { element: id });\n report.counts.skippedNodes++;\n }\n }\n for (const { source, target, ...attrs } of graphed.edges) {\n try {\n sink.addEdgeRecord(source, target, attrs, null);\n report.counts.edges++;\n } catch (err) {\n report.recordError(err, { element: `${source} -> ${target}` });\n report.counts.skippedEdges++;\n }\n }\n}\n\n/**\n * The content hash of some triples, in any order.\n * @param triples - the triples\n * @returns the SHA-256, hex\n */\nfunction hashOf(triples: readonly Triple[]): Promise<string> {\n return sha256Hex(triples.map(canonicalTriple).sort().join(\"\\n\")); // NOSONAR(S2871): code-unit order is the point: a locale-free, stable order for the hash\n}\n\n/**\n * Load pages into the sink from the cursor's offset until an empty page or a cap.\n * @param params - the params\n * @param sink - where to write\n * @param ctx - the context\n * @returns the report\n */\nasync function load(params: SparqlParams, sink: GraphSink, ctx: SourceContext): Promise<ImportReport> {\n const plan = planOf(params, ctx);\n const size = params.pageSize ?? 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Experimental.\n * @category Network sources\n */\nexport const sparqlSource: GraphSource<SparqlParams> = defineSource<SparqlParams>({\n id: SPARQL_SOURCE_ID,\n descriptor: SPARQL_DESCRIPTOR,\n import: load,\n expand,\n probe: async (params, ctx): Promise<SourceProbe> => {\n // the endpoint answers a one-solution query: it is up, it reads SPARQL, the credential works\n await send(ctx, \"CONSTRUCT { ?s ?p ?o } WHERE { ?s ?p ?o } LIMIT 1\");\n languageOf(params, ctx);\n return { ok: true };\n },\n validate: async (params, seen, ctx): Promise<SourceFreshness> => {\n const contentHash = await hashOf(await send(ctx, planOf(params, ctx).at(0)));\n let status: SourceFreshness[\"status\"] = \"unverifiable\";\n if (seen.contentHash !== undefined) {\n status = seen.contentHash === contentHash ? \"current\" : \"changed\";\n }\n return { status, via: \"hash\", validators: { contentHash } };\n 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-
{"version":3,"file":"importer.d.ts","sourceRoot":"","sources":["../../../../src/formats/cx/importer.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;GAwBG;AA6FH,OAAO,EACH,KAAK,mBAAmB,EACxB,KAAK,kBAAkB,EACvB,KAAK,aAAa,EAIrB,MAAM,gBAAgB,CAAC;AAUxB;;;GAGG;AACH,MAAM,WAAW,eAAgB,SAAQ,kBAAkB,EAAE,mBAAmB;IAC5E;;;;OAIG;IACH,GAAG,CAAC,EAAE,QAAQ,GAAG,UAAU,GAAG,SAAS,CAAC;CAC3C;AAED;;;;;GAKG;AACH,eAAO,MAAM,QAAQ;IAGjB,4CAA4C;;IAE5C,oDAAoD;;IAEpD,sDAAsD;;IAEtD;;;OAGG;;IAEH,0DAA0D;;IAE1D,0DAA0D;;IAE1D,8GAA8G;;IAE9G,4EAA4E;;IAE5E,gGAAgG;;IAEhG,wEAAwE;;IAExE,iHAAiH;;IAEjH,kGAAkG;;IAElG,gHAAgH;;IAEhH;;;OAGG;;IAEH,+EAA+E;;IAE/E,6DAA6D;;IAE7D,uEAAuE;;IAEvE;;;OAGG;;IAEH,iEAAiE;;IAEjE,gGAAgG;;IAEhG,qGAAqG;;IAErG,qCAAqC;;IAErC,mEAAmE;;IAEnE,4GAA4G;;IAE5G,iEAAiE;;IAEjE,8BAA8B;;IAE9B,kEAAkE;;IAElE,6DAA6D;;IAE7D,oCAAoC;;IAEpC;;;OAGG;;IAEH,2FAA2F;;IAE3F,sFAAsF;;IAEtF,+FAA+F;;IAE/F,yFAAyF;;IAEzF,qCAAqC;;IAErC,+EAA+E;;IAE/E,gHAAgH;;IAEhH,iDAAiD;;IAEjD;;;OAGG;;IAEH,2EAA2E;;IAE3E,iEAAiE;;IAEjE,kDAAkD;;IAElD;;;OAGG;;IAEH;;;OAGG;;IAEH;;;OAGG;;IAEH,0FAA0F;;IAE1F,kGAAkG;;IAElG;;;OAGG;;IAEH,wEAAwE;;;;;;;;EAE1E,CAAC;
|
|
1
|
+
{"version":3,"file":"importer.d.ts","sourceRoot":"","sources":["../../../../src/formats/cx/importer.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;GAwBG;AA6FH,OAAO,EACH,KAAK,mBAAmB,EACxB,KAAK,kBAAkB,EACvB,KAAK,aAAa,EAIrB,MAAM,gBAAgB,CAAC;AAUxB;;;GAGG;AACH,MAAM,WAAW,eAAgB,SAAQ,kBAAkB,EAAE,mBAAmB;IAC5E;;;;OAIG;IACH,GAAG,CAAC,EAAE,QAAQ,GAAG,UAAU,GAAG,SAAS,CAAC;CAC3C;AAED;;;;;GAKG;AACH,eAAO,MAAM,QAAQ;IAGjB,4CAA4C;;IAE5C,oDAAoD;;IAEpD,sDAAsD;;IAEtD;;;OAGG;;IAEH,0DAA0D;;IAE1D,0DAA0D;;IAE1D,8GAA8G;;IAE9G,4EAA4E;;IAE5E,gGAAgG;;IAEhG,wEAAwE;;IAExE,iHAAiH;;IAEjH,kGAAkG;;IAElG,gHAAgH;;IAEhH;;;OAGG;;IAEH,+EAA+E;;IAE/E,6DAA6D;;IAE7D,uEAAuE;;IAEvE;;;OAGG;;IAEH,iEAAiE;;IAEjE,gGAAgG;;IAEhG,qGAAqG;;IAErG,qCAAqC;;IAErC,mEAAmE;;IAEnE,4GAA4G;;IAE5G,iEAAiE;;IAEjE,8BAA8B;;IAE9B,kEAAkE;;IAElE,6DAA6D;;IAE7D,oCAAoC;;IAEpC;;;OAGG;;IAEH,2FAA2F;;IAE3F,sFAAsF;;IAEtF,+FAA+F;;IAE/F,yFAAyF;;IAEzF,qCAAqC;;IAErC,+EAA+E;;IAE/E,gHAAgH;;IAEhH,iDAAiD;;IAEjD;;;OAGG;;IAEH,2EAA2E;;IAE3E,iEAAiE;;IAEjE,kDAAkD;;IAElD;;;OAGG;;IAEH;;;OAGG;;IAEH;;;OAGG;;IAEH,0FAA0F;;IAE1F,kGAAkG;;IAElG;;;OAGG;;IAEH,wEAAwE;;;;;;;;EAE1E,CAAC;AAw/FH;;;GAGG;AACH,eAAO,MAAM,UAAU,EAAE,aAAa,CAAC,eAAe,CAqGpD,CAAC"}
|
|
@@ -2278,7 +2278,11 @@ class CxReader {
|
|
|
2278
2278
|
}
|
|
2279
2279
|
return true;
|
|
2280
2280
|
});
|
|
2281
|
-
const
|
|
2281
|
+
const { weightFrom } = this.options;
|
|
2282
|
+
const collection = aspect(this.doc, "cySubNetworks").length > 0;
|
|
2283
|
+
const source = others.size > 0
|
|
2284
|
+
? { entries: kept, otherViews: others.size, weightFrom, collection }
|
|
2285
|
+
: { entries: kept, weightFrom, collection };
|
|
2282
2286
|
this.report.keepForStyles(source);
|
|
2283
2287
|
}
|
|
2284
2288
|
/**
|