@gen-epix/ui 1.15.1 → 1.16.0

package/src/utils/DataUtil/DataUtil.ts

@@ -1,84 +0,0 @@
-import type { TFunction } from 'i18next';
-import { format } from 'date-fns';
-
-import type {
-  CaseSet,
-  Col,
-  Dim,
-  RefCol,
-  RefColValidationRulesResponseBody,
-  RefDim,
-  User,
-} from '../../api';
-import { ColType } from '../../api';
-import type { OptionBase } from '../../models/form';
-import { DATE_FORMAT } from '../../data/date';
-
-export class DataUtil {
-  public static getGeneticSequenceColOptionsForCaseTypeId(kwArgs: { caseTypeId: string; refColMap: Map<string, RefCol>; colMap: Map<string, Col>; colOptions: OptionBase<string>[] }): OptionBase<string>[] {
-    if (!kwArgs.caseTypeId) {
-      return [];
-    }
-    return kwArgs.colOptions.filter((option) => {
-      const col = kwArgs.colMap.get(option.value);
-      if (col?.case_type_id !== kwArgs.caseTypeId) {
-        return false;
-      }
-      const refCol = kwArgs.refColMap.get(col.ref_col_id);
-      return refCol?.col_type === ColType.GENETIC_SEQUENCE;
-    });
-  }
-
-
-  public static getDimOptionsForCaseTypeId(kwArgs: { caseTypeId: string; dimOptions: OptionBase<string>[]; dimMap: Map<string, Dim> }): OptionBase<string>[] {
-    if (!kwArgs.caseTypeId) {
-      return [];
-    }
-
-    return kwArgs.dimOptions.filter((option) => {
-      const dim = kwArgs.dimMap.get(option.value);
-      return dim?.case_type_id === kwArgs.caseTypeId;
-    });
-  }
-
-  public static getRefColOptionsForDimId(kwArgs: { dimId: string; dimMap: Map<string, Dim>; refDimMap: Map<string, RefDim>; refColOptions: OptionBase<string>[]; refColMap: Map<string, RefCol>; colsValidationRules: RefColValidationRulesResponseBody['valid_col_types_by_dim_type'] }): OptionBase<string>[] {
-    const dim = kwArgs.dimMap.get(kwArgs.dimId);
-    if (!dim) {
-      return [];
-    }
-    const refDim = kwArgs.refDimMap.get(dim.ref_dim_id);
-    return kwArgs.refColOptions.filter((option) => {
-      const refCol = kwArgs.refColMap.get(option.value);
-      if (refCol.ref_dim_id !== dim.ref_dim_id) {
-        return false;
-      }
-      const colType = refCol.col_type;
-      return kwArgs.colsValidationRules[refDim.dim_type].includes(colType);
-    });
-  }
-
-  public static getColTypeOptionsForRefDimId(kwArgs: { refDimId: string; refDimMap: Map<string, RefDim>; colTypeOptions: OptionBase<string>[]; colsValidationRules: RefColValidationRulesResponseBody['valid_col_types_by_dim_type'] }): OptionBase<string>[] {
-    const refDim = kwArgs.refDimMap.get(kwArgs.refDimId);
-    if (!refDim) {
-      return [];
-    }
-    return kwArgs.colTypeOptions.filter((option) => {
-      const colType = option.value as ColType;
-      return kwArgs.colsValidationRules[refDim.dim_type].includes(colType);
-    });
-  }
-
-
-  public static getUserDisplayValue(user: User, t: TFunction<'translation', undefined>): string {
-    if (!user) {
-      return t`Unknown user`;
-    }
-    return `${user.name} (${user.key})`;
-  }
-
-  public static getCaseSetName(caseSet: CaseSet): string {
-    return `${caseSet.name} (${format(caseSet.created_at, DATE_FORMAT.DATE)})`;
-  }
-
-
-}

package/src/utils/DataUtil/index.ts

@@ -1 +0,0 @@
-export * from './DataUtil';

package/src/utils/DownloadUtil/DownloadUtil.ts

@@ -1,237 +0,0 @@
-import { type TFunction } from 'i18next';
-import { format } from 'date-fns';
-import type { ECharts } from 'echarts';
-import writeXlsxFile from 'write-excel-file/browser';
-import { stringify } from 'csv/browser/esm/sync';
-
-import {
-  CaseApi,
-  LogLevel,
-  type Case,
-  type Col,
-  type CompleteCaseType,
-} from '../../api';
-import { ConfigManager } from '../../classes/managers/ConfigManager';
-import { DATE_FORMAT } from '../../data/date';
-import { StringUtil } from '../StringUtil';
-import { CaseTypeUtil } from '../CaseTypeUtil';
-import { CaseUtil } from '../CaseUtil';
-import { AuthenticationManager } from '../../classes/managers/AuthenticationManager';
-import { QueryClientManager } from '../../classes/managers/QueryClientManager';
-import { QueryUtil } from '../QueryUtil';
-import { QUERY_KEY } from '../../models/query';
-import { NotificationManager } from '../../classes/managers/NotificationManager';
-import { LogManager } from '../../classes/managers/LogManager';
-
-export class DownloadUtil {
-  public static async downloadExcelTemplate(caseTypeId: string, t: TFunction<'translation', undefined>): Promise<void> {
-    const queryClient = QueryClientManager.instance.queryClient;
-    try {
-      const completeCaseType = await queryClient.fetchQuery({
-        queryKey: QueryUtil.getGenericKey(QUERY_KEY.COMPLETE_CASE_TYPES, caseTypeId),
-        queryFn: async ({ signal }) => {
-          return (await CaseApi.instance.completeCaseTypesGetOne(caseTypeId, { signal })).data;
-        },
-      });
-
-      const headers = DownloadUtil.getColumnHeadersForImport(
-        CaseTypeUtil.getWritableImportExportColIds(completeCaseType)
-          .sort((a, b) => completeCaseType.ordered_col_ids.indexOf(a) - completeCaseType.ordered_col_ids.indexOf(b))
-        , completeCaseType,
-      );
-      const data = [
-        headers.map(header => ({ type: String, value: header })),
-      ];
-      const fileName = `${DownloadUtil.getTemplateFileName(completeCaseType)}.xlsx`;
-
-      // Generate Excel file as a Blob and download it
-      const blob = await writeXlsxFile(data, {
-        columns: headers.map(() => ({ width: 20 })),
-        stickyRowsCount: 1,
-        showGridLines: true,
-      });
-
-      // Convert blob to base64 and download
-      const arrayBuffer = await blob.arrayBuffer();
-      const base64 = DownloadUtil.arrayBufferToBase64(arrayBuffer);
-      DownloadUtil.createDownloadUrl(`data:application/vnd.openxmlformats-officedocument.spreadsheetml.sheet;base64,${base64}`, fileName);
-    } catch (error) {
-      LogManager.instance.log([{
-        detail: {
-          error,
-          stack: (error as Error)?.stack,
-        },
-        level: LogLevel.ERROR,
-        topic: (error as Error)?.message ? `Error: ${(error as Error)?.message}` : 'Error',
-      }]);
-      NotificationManager.instance.showNotification({
-        message: t('Excel template could not be created'),
-        severity: 'error',
-      });
-    }
-  }
-
-
-  public static createDownloadUrl(url: string, name: string): void {
-    const link = document.createElement('a');
-    link.download = name;
-    link.href = url;
-    document.body.appendChild(link);
-    link.click();
-    document.body.removeChild(link);
-  }
-
-  public static downloadAsMultiPartForm(kwArgs: { action: string; data: Record<string, string | string[]> }): void {
-    const formElement = document.createElement('form');
-    formElement.method = 'POST';
-    formElement.action = kwArgs.action;
-    formElement.style.display = 'none';
-    formElement.target = '_blank';
-
-    Object.entries(kwArgs.data).forEach(([key, value]) => {
-      if (Array.isArray(value)) {
-        value.forEach((v) => {
-          const input = document.createElement('input');
-          input.name = key;
-          input.value = v;
-          formElement.appendChild(input);
-        });
-        return;
-      }
-
-      const input = document.createElement('input');
-      input.name = key;
-      input.value = value;
-      formElement.appendChild(input);
-    });
-    const input = document.createElement('input');
-    input.name = 'token';
-    input.value = AuthenticationManager.instance.authContextProps?.user?.access_token ?? '';
-    formElement.appendChild(input);
-
-    document.body.appendChild(formElement);
-    formElement.submit();
-    document.body.removeChild(formElement);
-  }
-
-  public static getExportFileName(baseName: string, completeCaseType: CompleteCaseType, t: TFunction<'translation', undefined>): string {
-    return t('{{date}}--{{applicationName}}--{{caseTypeName}}--{{baseName}}', {
-      applicationName: StringUtil.createSlug(ConfigManager.instance.config.applicationName),
-      baseName: StringUtil.createSlug(baseName),
-      date: format(new Date(), DATE_FORMAT.DATE),
-      caseTypeName: StringUtil.createSlug(completeCaseType.name),
-    });
-  }
-
-  public static getTemplateFileName(completeCaseType: CompleteCaseType): string {
-    return `${StringUtil.createSlug(ConfigManager.instance.config.applicationName)}--${StringUtil.createSlug(completeCaseType.name)}--template`;
-  }
-
-  public static downloadEchartsImage(baseName: string, instance: ECharts, type: 'jpeg' | 'png', completeCaseType: CompleteCaseType, t: TFunction<'translation', undefined>): void {
-    const url = instance.getDataURL({
-      type,
-      pixelRatio: 2,
-      backgroundColor: '#fff',
-    });
-    const fileName = `${DownloadUtil.getExportFileName(baseName, completeCaseType, t)}.${type.toLowerCase()}`;
-    DownloadUtil.createDownloadUrl(url, fileName);
-  }
-
-  public static downloadCanvasImage(baseName: string, canvas: HTMLCanvasElement, type: 'jpeg' | 'png', completeCaseType: CompleteCaseType, t: TFunction<'translation', undefined>): void {
-    const dataUrl = canvas.toDataURL(type === 'jpeg' ? 'image/jpeg' : 'image/png');
-    const fileName = `${DownloadUtil.getExportFileName(baseName, completeCaseType, t)}.${type}`;
-    DownloadUtil.createDownloadUrl(dataUrl, fileName);
-  }
-
-  public static downloadNewick(baseName: string, newick: string, completeCaseType: CompleteCaseType, t: TFunction<'translation', undefined>): void {
-    const fileName = `${DownloadUtil.getExportFileName(baseName, completeCaseType, t)}.txt`;
-    DownloadUtil.createDownloadUrl(`data:text/x-nh;base64,${btoa(newick)}`, fileName);
-  }
-
-  public static downloadAsCsv(cases: Case[], colIds: string[], completeCaseType: CompleteCaseType, t: TFunction<'translation', undefined>): void {
-    const data = [
-      DownloadUtil.getColumnHeadersForExport(colIds, completeCaseType),
-      ...DownloadUtil.getRowsForExport(cases, colIds, completeCaseType),
-    ];
-    const csv = stringify(data, {
-      defaultEncoding: 'utf-8',
-    });
-    const fileName = `${DownloadUtil.getExportFileName(t`Line list`, completeCaseType, t)}.csv`;
-    DownloadUtil.createDownloadUrl(`data:text/csv;base64,${btoa(csv)}`, fileName);
-  }
-
-  public static async downloadAsExcel(cases: Case[], colIds: string[], completeCaseType: CompleteCaseType, t: TFunction<'translation', undefined>): Promise<void> {
-    // Prepare headers
-    const headers = DownloadUtil.getColumnHeadersForExport(colIds, completeCaseType);
-
-    // Prepare data rows
-    const rows = DownloadUtil.getRowsForExport(cases, colIds, completeCaseType);
-
-    // Convert data to the format expected by write-excel-file (SheetData)
-    // Each row is an array of Cell objects
-    const data = [
-      // Header row
-      headers.map(header => ({ type: String, value: header })),
-      // Data rows
-      ...rows.map(row => row.map(cell => ({ type: String, value: cell }))),
-    ];
-
-    const fileName = `${DownloadUtil.getExportFileName(t`Line list`, completeCaseType, t)}.xlsx`;
-
-    // Generate Excel file as a Blob and download it
-    const blob = await writeXlsxFile(data, {
-      columns: headers.map(() => ({ width: 20 })),
-      stickyRowsCount: 1,
-    });
-
-    // Convert blob to base64 and download
-    const arrayBuffer = await blob.arrayBuffer();
-    const base64 = DownloadUtil.arrayBufferToBase64(arrayBuffer);
-    DownloadUtil.createDownloadUrl(`data:application/vnd.openxmlformats-officedocument.spreadsheetml.sheet;base64,${base64}`, fileName);
-  }
-
-  private static getColumnHeadersForImport(colIds: string[], completeCaseType: CompleteCaseType): string[] {
-    return [
-      '_case_id',
-      '_case_date',
-      ...DownloadUtil.getColsForImportExport(colIds, completeCaseType).map(col => col.label),
-    ];
-  }
-
-  private static getColumnHeadersForExport(colIds: string[], completeCaseType: CompleteCaseType): string[] {
-    return [
-      '_case_id',
-      '_case_type',
-      '_case_date',
-      ...DownloadUtil.getColsForImportExport(colIds, completeCaseType).map(col => col.label),
-    ];
-  }
-
-  private static getRowsForExport(cases: Case[], colIds: string[], completeCaseType: CompleteCaseType): string[][] {
-    const cols = DownloadUtil.getColsForImportExport(colIds, completeCaseType);
-    return cases.map(row => [
-      row.id,
-      completeCaseType.name,
-      row.case_date ? format(row.case_date, DATE_FORMAT.DATE) : '',
-      ...cols.map(col => CaseUtil.getRowValue(row.content, col, completeCaseType, true).long),
-    ]);
-  }
-
-  private static getColsForImportExport(colIds: string[], completeCaseType: CompleteCaseType): Col[] {
-    return CaseTypeUtil.getCols(completeCaseType)
-      .filter(x => colIds.includes(x.id))
-      .sort((a, b) => {
-        return colIds.indexOf(a.id) - colIds.indexOf(b.id);
-      });
-  }
-
-  private static arrayBufferToBase64(buffer: ArrayBuffer) {
-    let binary = '';
-    const bytes = new Uint8Array(buffer);
-    const len = bytes.byteLength;
-    for (let i = 0; i < len; i++) {
-      binary += String.fromCharCode(bytes[i]);
-    }
-    return window.btoa(binary);
-  }
-}

package/src/utils/DownloadUtil/index.ts

@@ -1 +0,0 @@
-export * from './DownloadUtil';

package/src/utils/EffectiveRightsUtil/EffectiveRightsUtil.ts

@@ -1,142 +0,0 @@
-import type {
-  User,
-  ColSetMember,
-  CaseTypeSetMember,
-  OrganizationAccessCasePolicy,
-  OrganizationShareCasePolicy,
-  UserAccessCasePolicy,
-  UserShareCasePolicy,
-} from '../../api';
-import type { UserEffectiveRight } from '../../models/caseAccess';
-import { DataSetUtil } from '../DataSetUtil';
-
-type AssembleUserEffectiveRightsKwArgs = {
-  user: User;
-  organizationAccessCasePolicies: OrganizationAccessCasePolicy[];
-  organizationShareCasePolicies: OrganizationShareCasePolicy[];
-  userAccessCasePolicies: UserAccessCasePolicy[];
-  userShareCasePolicies: UserShareCasePolicy[];
-  caseTypeSetMembers: CaseTypeSetMember[];
-  colSetMembers: ColSetMember[];
-};
-
-export class EffectiveRightsUtil {
-  public static assembleUserEffectiveRights({
-    user,
-    organizationAccessCasePolicies,
-    organizationShareCasePolicies,
-    userAccessCasePolicies,
-    userShareCasePolicies,
-    caseTypeSetMembers,
-    colSetMembers,
-  }: AssembleUserEffectiveRightsKwArgs): UserEffectiveRight[] {
-    if (!user) {
-      return [];
-    }
-
-    if (!organizationAccessCasePolicies || !organizationShareCasePolicies || !userAccessCasePolicies || !userShareCasePolicies || !caseTypeSetMembers || !colSetMembers) {
-      return [];
-    }
-
-    const mappedCaseTypeSetMembers = DataSetUtil.getMappedSetMembers({
-      items: caseTypeSetMembers,
-      setProperty: 'case_type_set_id',
-      memberProperty: 'case_type_id',
-    });
-
-    const mappedColSetMembers = DataSetUtil.getMappedSetMembers({
-      items: colSetMembers,
-      setProperty: 'col_set_id',
-      memberProperty: 'col_id',
-    });
-
-    return organizationAccessCasePolicies.map(organizationPolicy => {
-      const userPolicy = userAccessCasePolicies.find(p => p.data_collection_id === organizationPolicy.data_collection_id);
-      const organizationSharePolicy = organizationShareCasePolicies.filter(p => p.data_collection_id === organizationPolicy.data_collection_id);
-      const userSharePolicy = userShareCasePolicies.filter(p => p.data_collection_id === organizationPolicy.data_collection_id);
-
-      const effectiveShareCaseRights: UserEffectiveRight['effective_share_case_rights'] = [];
-      organizationSharePolicy.forEach(organizationShareCasePolicy => {
-        const userShareCasePolicy = userSharePolicy.find(p => p.from_data_collection_id === organizationShareCasePolicy.from_data_collection_id);
-        const organizationShareCaseTypeIds = caseTypeSetMembers.filter(member => member.case_type_set_id === organizationShareCasePolicy.case_type_set_id).map(member => member.case_type_id);
-        const userShareCaseTypeIds = caseTypeSetMembers.filter(member => member.case_type_set_id === userShareCasePolicy?.case_type_set_id).map(member => member.case_type_id);
-        const { setIds: case_type_set_ids, categorizedMemberIds: categorized_case_type_ids, uncategorizedMemberIds: uncategorized_case_type_ids } = DataSetUtil.getCategorizedSetMembers({
-          mappedSetMembers: mappedCaseTypeSetMembers,
-          parentSetId: organizationShareCasePolicy.case_type_set_id,
-          parentMemberIds: organizationShareCaseTypeIds,
-          childMemberIds: userShareCaseTypeIds,
-        });
-
-        const add_case = organizationShareCasePolicy.add_case && userShareCasePolicy?.add_case;
-        const remove_case = organizationShareCasePolicy.remove_case && userShareCasePolicy?.remove_case;
-        const add_case_set = organizationShareCasePolicy.add_case_set && userShareCasePolicy?.add_case_set;
-        const remove_case_set = organizationShareCasePolicy.remove_case_set && userShareCasePolicy?.remove_case_set;
-
-        if ([add_case, remove_case, add_case_set, remove_case_set].some(x => x)) {
-          effectiveShareCaseRights.push({
-            add_case,
-            remove_case,
-            add_case_set,
-            remove_case_set,
-            from_data_collection_id: organizationShareCasePolicy.from_data_collection_id,
-            case_type_set_ids,
-            categorized_case_type_ids,
-            uncategorized_case_type_ids,
-          } satisfies UserEffectiveRight['effective_share_case_rights'][number]);
-        }
-      });
-
-
-      const organizationCaseTypeIds = caseTypeSetMembers.filter(member => member.case_type_set_id === organizationPolicy.case_type_set_id).map(member => member.case_type_id);
-      const userCaseTypeIds = caseTypeSetMembers.filter(member => member.case_type_set_id === userPolicy?.case_type_set_id).map(member => member.case_type_id);
-      const { setIds: case_type_set_ids, categorizedMemberIds: categorized_case_type_ids, uncategorizedMemberIds: uncategorized_case_type_ids } = DataSetUtil.getCategorizedSetMembers({
-        mappedSetMembers: mappedCaseTypeSetMembers,
-        parentSetId: organizationPolicy.case_type_set_id,
-        parentMemberIds: organizationCaseTypeIds,
-        childMemberIds: userCaseTypeIds,
-      });
-
-      const organizationReadColIds = colSetMembers.filter(member => member.col_set_id === organizationPolicy.read_col_set_id).map(member => member.col_id);
-      const userReadColIds = colSetMembers.filter(member => member.col_set_id === userPolicy?.read_col_set_id).map(member => member.col_id);
-      const { setIds: read_col_set_ids, categorizedMemberIds: categorized_read_col_ids, uncategorizedMemberIds: uncategorized_read_col_ids } = DataSetUtil.getCategorizedSetMembers({
-        mappedSetMembers: mappedColSetMembers,
-        parentSetId: organizationPolicy.read_col_set_id,
-        parentMemberIds: organizationReadColIds,
-        childMemberIds: userReadColIds,
-      });
-
-      const organizationWriteColIds = colSetMembers.filter(member => member.col_set_id === organizationPolicy.write_col_set_id).map(member => member.col_id);
-      const userWriteColIds = colSetMembers.filter(member => member.col_set_id === userPolicy?.write_col_set_id).map(member => member.col_id);
-      const { setIds: write_col_set_ids, categorizedMemberIds: categorized_write_col_ids, uncategorizedMemberIds: uncategorized_write_col_ids } = DataSetUtil.getCategorizedSetMembers({
-        mappedSetMembers: mappedColSetMembers,
-        parentSetId: organizationPolicy.write_col_set_id,
-        parentMemberIds: organizationWriteColIds,
-        childMemberIds: userWriteColIds,
-      });
-
-      return {
-        add_case: organizationPolicy.add_case && userPolicy?.add_case,
-        add_case_set: organizationPolicy.add_case_set && userPolicy?.add_case_set,
-        data_collection_id: organizationPolicy.data_collection_id,
-        is_private: organizationPolicy.is_private,
-        organization_id: organizationPolicy.organization_id,
-        read_case_set: organizationPolicy.read_case_set && userPolicy?.read_case_set,
-        remove_case: organizationPolicy.remove_case && userPolicy?.remove_case,
-        remove_case_set: organizationPolicy.remove_case_set && userPolicy?.remove_case_set,
-        write_case_set: organizationPolicy.write_case_set && userPolicy?.write_case_set,
-        write_col_set_id: organizationPolicy.write_col_set_id,
-        read_col_set_id: organizationPolicy.read_col_set_id,
-        case_type_set_ids,
-        categorized_case_type_ids,
-        uncategorized_case_type_ids,
-        read_col_set_ids,
-        categorized_read_col_ids,
-        uncategorized_read_col_ids,
-        write_col_set_ids,
-        categorized_write_col_ids,
-        uncategorized_write_col_ids,
-        effective_share_case_rights: effectiveShareCaseRights,
-      } satisfies UserEffectiveRight;
-    }).filter((policy => !!policy));
-  }
-}

package/src/utils/EffectiveRightsUtil/index.ts

@@ -1 +0,0 @@
-export * from './EffectiveRightsUtil';

package/src/utils/EpiCurveUtil/EpiCurveUtil.ts

@@ -1,180 +0,0 @@
-import type { Duration } from 'date-fns';
-import {
-  eachDayOfInterval,
-  eachMonthOfInterval,
-  eachQuarterOfInterval,
-  eachWeekOfInterval,
-  eachYearOfInterval,
-  format,
-  intervalToDuration,
-  isAfter,
-  isBefore,
-  isEqual,
-  isValid,
-} from 'date-fns';
-
-import { CaseTypeUtil } from '../CaseTypeUtil';
-import { EpiFilterUtil } from '../EpiFilterUtil';
-import type {
-  Case,
-  CompleteCaseType,
-  Col,
-} from '../../api';
-import { ColType } from '../../api';
-import { DATE_FORMAT } from '../../data/date';
-
-interface Item {
-  date: Date;
-  value: number;
-  row: Case;
-}
-
-export class EpiCurveUtil {
-  /**
-   * Gets rows sorted by time
-   * @param completeCaseType
-   * @param lineList
-   * @param cols
-   * @returns
-   */
-  public static getSortedItems(completeCaseType: CompleteCaseType, cases: Case[], cols: Col[]): Item[] {
-    if (!cols.length || !cases.length || !completeCaseType) {
-      return [];
-    }
-
-    // cache the parsers
-    const dateParsers: { [key: string]: (date: string) => Date } = {};
-    cols.forEach(col => {
-      dateParsers[col.id] = EpiFilterUtil.getDateParser(completeCaseType.ref_cols[col.ref_col_id]);
-    });
-
-    const items: Item[] = cases.map(row => {
-      const dates = cols.map(col => {
-        const columnDate = row.content[col.id];
-        if (!columnDate) {
-          return null;
-        }
-        const parsedColumnDate = dateParsers[col.id](columnDate);
-        if (!isValid(parsedColumnDate)) {
-          return null;
-        }
-        return parsedColumnDate;
-      }).filter(d => !!d);
-
-      return {
-        date: dates[0] ?? null,
-        // when count is null, 1 should be assumed
-        value: row.count ?? 1,
-        row,
-      };
-    }).filter(item => !!item.date);
-
-    return items.sort((a, b) => {
-      const aData = a.date;
-      const bData = b.date;
-
-      if (isAfter(aData, bData)) {
-        return 1;
-      }
-      if (isBefore(aData, bData)) {
-        return -1;
-      }
-      return 0;
-    });
-  }
-
-  /**
-   * Finds the initial column (resolution) for the given dimensionId in the given lineList
-   * @param completeCaseType
-   * @param lineList
-   * @param cols
-   * @returns
-   */
-  public static getPreferredTimeColumn(completeCaseType: CompleteCaseType, cases: Case[], cols: Col[]): Col {
-    const items = EpiCurveUtil.getSortedItems(completeCaseType, cases, cols);
-
-    if (!items?.length) {
-      return cols?.[0] ?? null;
-    }
-
-    const duration: Duration = {
-      years: 0,
-      ...intervalToDuration({
-        start: items[0].date,
-        end: items[items.length - 1].date,
-      }),
-    };
-
-    const dayCol = cols.find(col => completeCaseType.ref_cols[col.ref_col_id].col_type === ColType.TIME_DAY);
-    if (dayCol && (duration.years ?? 0) === 0 && duration.months <= 3) {
-      return dayCol;
-    }
-    const weekCol = cols.find(col => completeCaseType.ref_cols[col.ref_col_id].col_type === ColType.TIME_WEEK);
-    if (weekCol && (duration.years ?? 0) <= 1) {
-      return weekCol;
-    }
-    const monthCol = cols.find(col => completeCaseType.ref_cols[col.ref_col_id].col_type === ColType.TIME_MONTH);
-    if (monthCol && (duration.years ?? 0) <= 2) {
-      return monthCol;
-    }
-    const quarterCol = cols.find(col => completeCaseType.ref_cols[col.ref_col_id].col_type === ColType.TIME_QUARTER);
-    if (quarterCol && (duration.years ?? 0) <= 5) {
-      return quarterCol;
-    }
-    const yearCol = cols.find(col => completeCaseType.ref_cols[col.ref_col_id].col_type === ColType.TIME_QUARTER);
-    if (yearCol) {
-      return yearCol;
-    }
-
-    return CaseTypeUtil.getPreferredColInDimHavingHighestRank(cols, completeCaseType);
-  }
-
-  public static getXAxisLabel(colType: ColType, value: Date): string {
-    switch (colType) {
-      case ColType.TIME_DAY:
-        return format(value, DATE_FORMAT.DATE);
-      case ColType.TIME_WEEK:
-        return format(value, DATE_FORMAT.YEAR_WEEK, { useAdditionalWeekYearTokens: true });
-      case ColType.TIME_MONTH:
-        return format(value, DATE_FORMAT.YEAR_MONTH);
-      case ColType.TIME_QUARTER:
-        return format(value, DATE_FORMAT.YEAR_QUARTER);
-      case ColType.TIME_YEAR:
-        return format(value, DATE_FORMAT.YEAR);
-      default:
-        throw Error(`unknown col_type ${colType}`);
-    }
-  }
-
-  public static getXAxisIntervals(colType: ColType, items: Item[]): Date[] {
-    if (items.length === 0) {
-      return [];
-    }
-
-    const start = items[0].date;
-    const end = items[items.length - 1].date;
-
-    switch (colType) {
-      case ColType.TIME_DAY:
-        return eachDayOfInterval({ start, end });
-      case ColType.TIME_WEEK:
-        return eachWeekOfInterval({ start, end });
-      case ColType.TIME_MONTH:
-        return eachMonthOfInterval({ start, end });
-      case ColType.TIME_QUARTER:
-        return eachQuarterOfInterval({ start, end });
-      case ColType.TIME_YEAR:
-        return eachYearOfInterval({ start, end });
-      default:
-        throw Error(`unknown col_type ${colType}`);
-    }
-  }
-
-  public static getItemsWithinInterval(items: Item[], intervals: Date[], index: number): Item[] {
-    return items.filter(item => {
-      const nextInterval = intervals[index + 1];
-      const itemDate = item.date;
-      return isEqual(itemDate, intervals[index]) || (isAfter(itemDate, intervals[index]) && (!nextInterval || isBefore(itemDate, nextInterval)));
-    });
-  }
-}

package/src/utils/EpiCurveUtil/index.ts

@@ -1 +0,0 @@
-export * from './EpiCurveUtil';