@cornerstonejs/tools 2.0.0-beta.6 → 2.0.0-beta.8

package/dist/esm/stateManagement/segmentation/SegmentationStateManager.js

@@ -1,15 +1,18 @@
+import cloneDeep from 'lodash.clonedeep';
 import { utilities as csUtils } from '@cornerstonejs/core';
-import CORNERSTONE_COLOR_LUT from '../../constants/COLOR_LUT';
 import { SegmentationRepresentations } from '../../enums';
 import getDefaultContourConfig from '../../tools/displayTools/Contour/contourConfig';
 import getDefaultLabelmapConfig from '../../tools/displayTools/Labelmap/labelmapConfig';
+import getDefaultSurfaceConfig from '../../tools/displayTools/Surface/surfaceConfig';
 const defaultLabelmapConfig = getDefaultLabelmapConfig();
 const defaultContourConfig = getDefaultContourConfig();
+const defaultSurfaceConfig = getDefaultSurfaceConfig();
 const newGlobalConfig = {
     renderInactiveSegmentations: true,
     representations: {
         [SegmentationRepresentations.Labelmap]: defaultLabelmapConfig,
         [SegmentationRepresentations.Contour]: defaultContourConfig,
+        [SegmentationRepresentations.Surface]: defaultSurfaceConfig,
     },
 };
 const initialDefaultState = {
@@ -35,6 +38,9 @@ export default class SegmentationStateManager {
     getColorLUT(lutIndex) {
         return this.state.colorLUT[lutIndex];
     }
+    getNextColorLUTIndex() {
+        return this.state.colorLUT.length;
+    }
     resetState() {
         this.state = structuredClone(initialDefaultState);
     }
@@ -42,7 +48,6 @@ export default class SegmentationStateManager {
         return this.state.segmentations.find((segmentation) => segmentation.segmentationId === segmentationId);
     }
     addSegmentation(segmentation) {
-        this._initDefaultColorLUTIfNecessary();
         if (this.getSegmentation(segmentation.segmentationId)) {
             throw new Error(`Segmentation with id ${segmentation.segmentationId} already exists`);
         }
@@ -81,7 +86,7 @@ export default class SegmentationStateManager {
     }
     getSegmentationRepresentationByUID(toolGroupId, segmentationRepresentationUID) {
         const toolGroupSegRepresentations = this.getSegmentationRepresentations(toolGroupId);
-        const segmentationData = toolGroupSegRepresentations.find((representation) => representation.segmentationRepresentationUID ===
+        const segmentationData = toolGroupSegRepresentations?.find((representation) => representation.segmentationRepresentationUID ===
             segmentationRepresentationUID);
         return segmentationData;
     }
@@ -145,12 +150,17 @@ export default class SegmentationStateManager {
         }
         return segmentationRepresentation.segmentSpecificConfig[segmentIndex];
     }
-    setSegmentSpecificConfig(toolGroupId, segmentationRepresentationUID, config) {
+    setSegmentSpecificConfig(toolGroupId, segmentationRepresentationUID, config, options) {
         const segmentationRepresentation = this.getSegmentationRepresentationByUID(toolGroupId, segmentationRepresentationUID);
         if (!segmentationRepresentation) {
             return;
         }
-        segmentationRepresentation.segmentSpecificConfig = config;
+        if (!segmentationRepresentation.segmentSpecificConfig || options?.clear) {
+            segmentationRepresentation.segmentSpecificConfig = {};
+        }
+        Object.keys(config).forEach((key) => {
+            segmentationRepresentation.segmentSpecificConfig[key] = config[key];
+        });
     }
     setSegmentationRepresentationConfig(toolGroupId, config) {
         let toolGroupStateWithConfig = this.state.toolGroups[toolGroupId];
@@ -171,9 +181,9 @@ export default class SegmentationStateManager {
     }
     addColorLUT(colorLUT, lutIndex) {
         if (this.state.colorLUT[lutIndex]) {
-            console.log('Color LUT table already exists, overwriting');
+            console.warn('Color LUT table already exists, overwriting');
         }
-        this.state.colorLUT[lutIndex] = colorLUT;
+        this.state.colorLUT[lutIndex] = cloneDeep(colorLUT);
     }
     removeColorLUT(colorLUTIndex) {
         delete this.state.colorLUT[colorLUTIndex];
@@ -201,11 +211,6 @@ export default class SegmentationStateManager {
             });
         }
     }
-    _initDefaultColorLUTIfNecessary() {
-        if (this.state.colorLUT.length === 0 || !this.state.colorLUT[0]) {
-            this.addColorLUT(CORNERSTONE_COLOR_LUT, 0);
-        }
-    }
 }
 const defaultSegmentationStateManager = new SegmentationStateManager('DEFAULT');
 export { defaultSegmentationStateManager };

package/dist/esm/stateManagement/segmentation/SegmentationStateManager.js.map

@@ -1 +1 @@
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package/dist/esm/stateManagement/segmentation/activeSegmentation.js

@@ -1,4 +1,4 @@
-import { getDefaultSegmentationStateManager } from './segmentationState';
+import { getDefaultSegmentationStateManager, getSegmentation, } from './segmentationState';
 import { triggerSegmentationRepresentationModified } from './triggerSegmentationEvents';
 function getActiveSegmentationRepresentation(toolGroupId) {
     const segmentationStateManager = getDefaultSegmentationStateManager();
@@ -9,10 +9,18 @@ function getActiveSegmentationRepresentation(toolGroupId) {
     const activeRepresentation = toolGroupSegmentationRepresentations.find((representation) => representation.active);
     return activeRepresentation;
 }
+function getActiveSegmentation(toolGroupId) {
+    const activeRepresentation = getActiveSegmentationRepresentation(toolGroupId);
+    if (!activeRepresentation) {
+        return;
+    }
+    const activeSegmentation = getSegmentation(activeRepresentation.segmentationId);
+    return activeSegmentation;
+}
 function setActiveSegmentationRepresentation(toolGroupId, segmentationRepresentationUID) {
     const segmentationStateManager = getDefaultSegmentationStateManager();
     segmentationStateManager.setActiveSegmentationRepresentation(toolGroupId, segmentationRepresentationUID);
     triggerSegmentationRepresentationModified(toolGroupId, segmentationRepresentationUID);
 }
-export { getActiveSegmentationRepresentation, setActiveSegmentationRepresentation, };
+export { getActiveSegmentationRepresentation, getActiveSegmentation, setActiveSegmentationRepresentation, };
 //# sourceMappingURL=activeSegmentation.js.map

package/dist/esm/stateManagement/segmentation/activeSegmentation.js.map

@@ -1 +1 @@
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+{"version":3,"file":"activeSegmentation.js","sourceRoot":"","sources":["../../../../src/stateManagement/segmentation/activeSegmentation.ts"],"names":[],"mappings":"AACA,OAAO,EACL,kCAAkC,EAClC,eAAe,GAChB,MAAM,qBAAqB,CAAC;AAC7B,OAAO,EAAE,yCAAyC,EAAE,MAAM,6BAA6B,CAAC;AAQxF,SAAS,mCAAmC,CAC1C,WAAmB;IAEnB,MAAM,wBAAwB,GAAG,kCAAkC,EAAE,CAAC;IAEtE,MAAM,oCAAoC,GACxC,wBAAwB,CAAC,8BAA8B,CAAC,WAAW,CAAC,CAAC;IAEvE,IAAI,CAAC,oCAAoC,EAAE,CAAC;QAC1C,OAAO;IACT,CAAC;IAED,MAAM,oBAAoB,GAAG,oCAAoC,CAAC,IAAI,CACpE,CAAC,cAAc,EAAE,EAAE,CAAC,cAAc,CAAC,MAAM,CAC1C,CAAC;IAEF,OAAO,oBAAoB,CAAC;AAC9B,CAAC;AAOD,SAAS,qBAAqB,CAAC,WAAmB;IAChD,MAAM,oBAAoB,GAAG,mCAAmC,CAAC,WAAW,CAAC,CAAC;IAE9E,IAAI,CAAC,oBAAoB,EAAE,CAAC;QAC1B,OAAO;IACT,CAAC;IAED,MAAM,kBAAkB,GAAG,eAAe,CACxC,oBAAoB,CAAC,cAAc,CACpC,CAAC;IAEF,OAAO,kBAAkB,CAAC;AAC5B,CAAC;AAUD,SAAS,mCAAmC,CAC1C,WAAmB,EACnB,6BAAqC;IAErC,MAAM,wBAAwB,GAAG,kCAAkC,EAAE,CAAC;IAEtE,wBAAwB,CAAC,mCAAmC,CAC1D,WAAW,EACX,6BAA6B,CAC9B,CAAC;IAEF,yCAAyC,CACvC,WAAW,EACX,6BAA6B,CAC9B,CAAC;AACJ,CAAC;AAED,OAAO,EAEL,mCAAmC,EACnC,qBAAqB,EAErB,mCAAmC,GACpC,CAAC"}

package/dist/esm/stateManagement/segmentation/addRepresentationData.js

@@ -0,0 +1,30 @@
+import { getSegmentation } from './segmentationState';
+import SegmentationRepresentations from '../../enums/SegmentationRepresentations';
+function addRepresentationData({ segmentationId, type, data, }) {
+    const segmentation = getSegmentation(segmentationId);
+    if (segmentation.representationData[type]) {
+        console.warn(`Representation data of type ${type} already exists for segmentation ${segmentationId}, overwriting it.`);
+    }
+    switch (type) {
+        case SegmentationRepresentations.Labelmap:
+            if (data) {
+                segmentation.representationData[type] =
+                    data;
+            }
+            break;
+        case SegmentationRepresentations.Contour:
+            if (data) {
+                segmentation.representationData[type] = data;
+            }
+            break;
+        case SegmentationRepresentations.Surface:
+            if (data) {
+                segmentation.representationData[type] = data;
+            }
+            break;
+        default:
+            throw new Error(`Invalid representation type ${type}`);
+    }
+}
+export default addRepresentationData;
+//# sourceMappingURL=addRepresentationData.js.map

package/dist/esm/stateManagement/segmentation/addRepresentationData.js.map

@@ -0,0 +1 @@
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package/dist/esm/stateManagement/segmentation/addSegmentationRepresentation.js

@@ -0,0 +1,65 @@
+import { getRenderingEngine, utilities } from '@cornerstonejs/core';
+import * as SegmentationConfig from './config/segmentationConfig';
+import { addSegmentationRepresentation as addSegmentationRepresentationToState, getNextColorLUTIndex, addColorLUT, } from './segmentationState';
+import { getRepresentationSpecificConfig } from './helpers/getRepresentationSpecificConfig';
+import CORNERSTONE_COLOR_LUT from '../../constants/COLOR_LUT';
+import { getToolGroup } from '../../store/ToolGroupManager';
+import { triggerAnnotationRenderForViewportIds } from '../../utilities';
+import { SegmentationRepresentations } from '../../enums';
+async function addSegmentationRepresentation(toolGroupId, representationInput, toolGroupSpecificConfig) {
+    const { segmentationId, options = {} } = representationInput;
+    const segmentationRepresentationUID = representationInput.options?.segmentationRepresentationUID ||
+        utilities.uuidv4();
+    const segmentsHidden = new Set();
+    const colorLUTIndexToUse = getColorLUTIndex(options);
+    const toolGroupSpecificRepresentation = {
+        segmentationId,
+        segmentationRepresentationUID,
+        type: representationInput.type,
+        segmentsHidden,
+        colorLUTIndex: colorLUTIndexToUse,
+        active: true,
+        segmentationRepresentationSpecificConfig: {},
+        segmentSpecificConfig: {},
+        config: getRepresentationSpecificConfig(representationInput),
+        polySeg: options.polySeg,
+    };
+    if (toolGroupSpecificConfig) {
+        const currentToolGroupConfig = SegmentationConfig.getToolGroupSpecificConfig(toolGroupId);
+        const mergedConfig = utilities.deepMerge(currentToolGroupConfig, toolGroupSpecificConfig);
+        SegmentationConfig.setToolGroupSpecificConfig(toolGroupId, {
+            renderInactiveSegmentations: mergedConfig.renderInactiveSegmentations || true,
+            representations: {
+                ...mergedConfig.representations,
+            },
+        });
+    }
+    addSegmentationRepresentationToState(toolGroupId, toolGroupSpecificRepresentation);
+    if (representationInput.type === SegmentationRepresentations.Contour) {
+        getToolGroup(toolGroupId)
+            .getViewportsInfo()
+            .forEach(({ viewportId, renderingEngineId }) => {
+            const renderingEngine = getRenderingEngine(renderingEngineId);
+            triggerAnnotationRenderForViewportIds(renderingEngine, [viewportId]);
+        });
+    }
+    return segmentationRepresentationUID;
+}
+function getColorLUTIndex(options = {}) {
+    const colorLUTOrIndexInput = options.colorLUTOrIndex;
+    let colorLUTIndexToUse;
+    if (typeof colorLUTOrIndexInput === 'number') {
+        colorLUTIndexToUse = colorLUTOrIndexInput;
+    }
+    else {
+        const nextIndex = getNextColorLUTIndex();
+        const colorLUTToAdd = Array.isArray(colorLUTOrIndexInput)
+            ? colorLUTOrIndexInput
+            : CORNERSTONE_COLOR_LUT;
+        addColorLUT(colorLUTToAdd, nextIndex);
+        colorLUTIndexToUse = nextIndex;
+    }
+    return colorLUTIndexToUse;
+}
+export { addSegmentationRepresentation };
+//# sourceMappingURL=addSegmentationRepresentation.js.map

package/dist/esm/stateManagement/segmentation/addSegmentationRepresentation.js.map

@@ -0,0 +1 @@
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package/dist/esm/stateManagement/segmentation/addSegmentationRepresentations.js

@@ -1,32 +1,15 @@
-import Representations from '../../enums/SegmentationRepresentations';
 import { getToolGroup } from '../../store/ToolGroupManager';
-import { labelmapDisplay } from '../../tools/displayTools/Labelmap';
-import { contourDisplay } from '../../tools/displayTools/Contour';
+import { addSegmentationRepresentation } from './addSegmentationRepresentation';
 async function addSegmentationRepresentations(toolGroupId, representationInputArray, toolGroupSpecificRepresentationConfig) {
     const toolGroup = getToolGroup(toolGroupId);
     if (!toolGroup) {
         throw new Error(`No tool group found for toolGroupId: ${toolGroupId}`);
     }
     const promises = representationInputArray.map((representationInput) => {
-        return _addSegmentationRepresentation(toolGroupId, representationInput, toolGroupSpecificRepresentationConfig);
+        return addSegmentationRepresentation(toolGroupId, representationInput, toolGroupSpecificRepresentationConfig);
     });
     const segmentationRepresentationUIDs = await Promise.all(promises);
     return segmentationRepresentationUIDs;
 }
-async function _addSegmentationRepresentation(toolGroupId, representationInput, toolGroupSpecificRepresentationConfig) {
-    let segmentationRepresentationUID;
-    if (representationInput.type === Representations.Labelmap) {
-        segmentationRepresentationUID =
-            await labelmapDisplay.addSegmentationRepresentation(toolGroupId, representationInput, toolGroupSpecificRepresentationConfig);
-    }
-    else if (representationInput.type === Representations.Contour) {
-        segmentationRepresentationUID =
-            await contourDisplay.addSegmentationRepresentation(toolGroupId, representationInput, toolGroupSpecificRepresentationConfig);
-    }
-    else {
-        throw new Error(`The representation type ${representationInput.type} is not supported`);
-    }
-    return segmentationRepresentationUID;
-}
 export default addSegmentationRepresentations;
 //# sourceMappingURL=addSegmentationRepresentations.js.map

package/dist/esm/stateManagement/segmentation/addSegmentationRepresentations.js.map

@@ -1 +1 @@
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+{"version":3,"file":"addSegmentationRepresentations.js","sourceRoot":"","sources":["../../../../src/stateManagement/segmentation/addSegmentationRepresentations.ts"],"names":[],"mappings":"AAIA,OAAO,EAAE,YAAY,EAAE,MAAM,8BAA8B,CAAC;AAE5D,OAAO,EAAE,6BAA6B,EAAE,MAAM,iCAAiC,CAAC;AAYhF,KAAK,UAAU,8BAA8B,CAC3C,WAAmB,EACnB,wBAAqD,EACrD,qCAAwE;IAGxE,MAAM,SAAS,GAAG,YAAY,CAAC,WAAW,CAAC,CAAC;IAE5C,IAAI,CAAC,SAAS,EAAE,CAAC;QACf,MAAM,IAAI,KAAK,CAAC,wCAAwC,WAAW,EAAE,CAAC,CAAC;IACzE,CAAC;IAED,MAAM,QAAQ,GAAG,wBAAwB,CAAC,GAAG,CAAC,CAAC,mBAAmB,EAAE,EAAE;QACpE,OAAO,6BAA6B,CAClC,WAAW,EACX,mBAAmB,EACnB,qCAAqC,CACtC,CAAC;IACJ,CAAC,CAAC,CAAC;IAEH,MAAM,8BAA8B,GAAG,MAAM,OAAO,CAAC,GAAG,CAAC,QAAQ,CAAC,CAAC;IAEnE,OAAO,8BAA8B,CAAC;AACxC,CAAC;AAED,eAAe,8BAA8B,CAAC"}

package/dist/esm/stateManagement/segmentation/config/segmentationColor.js

@@ -29,7 +29,14 @@ function getColorForSegmentIndex(toolGroupId, segmentationRepresentationUID, seg
     }
     const { colorLUTIndex } = segmentationRepresentation;
     const colorLUT = SegmentationState.getColorLUT(colorLUTIndex);
-    return colorLUT[segmentIndex];
+    let colorValue = colorLUT[segmentIndex];
+    if (!colorValue) {
+        if (typeof segmentIndex !== 'number') {
+            throw new Error(`Can't create colour for LUT index ${segmentIndex}`);
+        }
+        colorValue = colorLUT[segmentIndex] = [0, 0, 0, 0];
+    }
+    return colorValue;
 }
 function setColorForSegmentIndex(toolGroupId, segmentationRepresentationUID, segmentIndex, color) {
     const colorReference = getColorForSegmentIndex(toolGroupId, segmentationRepresentationUID, segmentIndex);

package/dist/esm/stateManagement/segmentation/config/segmentationColor.js.map

@@ -1 +1 @@
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package/dist/esm/stateManagement/segmentation/config/segmentationVisibility.js

@@ -1,33 +1,7 @@
-import { cache } from '@cornerstonejs/core';
 import * as SegmentationState from '../../../stateManagement/segmentation/segmentationState';
 import { getSegmentationRepresentations } from '../../../stateManagement/segmentation/segmentationState';
+import { getUniqueSegmentIndices } from '../../../utilities/segmentation';
 import { triggerSegmentationRepresentationModified } from '../triggerSegmentationEvents';
-import SegmentationRepresentations from '../../../enums/SegmentationRepresentations';
-function getSegmentationIndices(segmentationId) {
-    const segmentation = SegmentationState.getSegmentation(segmentationId);
-    if (segmentation.type === SegmentationRepresentations.Labelmap) {
-        const volume = cache.getVolume(segmentationId);
-        const scalarData = volume.getScalarData();
-        const keySet = {};
-        for (let i = 0; i < scalarData.length; i++) {
-            const segmentIndex = scalarData[i];
-            if (segmentIndex !== 0 && !keySet[segmentIndex]) {
-                keySet[segmentIndex] = true;
-            }
-        }
-        return Object.keys(keySet).map((it) => parseInt(it, 10));
-    }
-    else if (segmentation.type === SegmentationRepresentations.Contour) {
-        const geometryIds = segmentation.representationData.CONTOUR?.geometryIds;
-        if (!geometryIds) {
-            throw new Error(`No geometryIds found for segmentationId ${segmentationId}`);
-        }
-        return geometryIds.map((geometryId) => {
-            const geometry = cache.getGeometry(geometryId);
-            return geometry.data.getSegmentIndex();
-        });
-    }
-}
 function setSegmentationVisibility(toolGroupId, segmentationRepresentationUID, visibility) {
     const toolGroupSegmentationRepresentations = getSegmentationRepresentations(toolGroupId);
     if (!toolGroupSegmentationRepresentations) {
@@ -39,7 +13,7 @@ function setSegmentationVisibility(toolGroupId, segmentationRepresentationUID, v
         return;
     }
     const { segmentsHidden, segmentationId } = representation;
-    const indices = getSegmentationIndices(segmentationId);
+    const indices = getUniqueSegmentIndices(segmentationId);
     if (visibility) {
         segmentsHidden.clear();
     }
@@ -57,8 +31,11 @@ function getSegmentationVisibility(toolGroupId, segmentationRepresentationUID) {
     if (!representation) {
         return;
     }
-    const { segmentsHidden } = representation;
-    return segmentsHidden.size === 0;
+    const { segmentsHidden, segmentationId } = representation;
+    const indices = getUniqueSegmentIndices(segmentationId);
+    const indicesSet = new Set(indices);
+    segmentsHidden.forEach((segmentIndex) => indicesSet.delete(segmentIndex));
+    return !!indicesSet.size;
 }
 function setSegmentsVisibility(toolGroupId, segmentationRepresentationUID, segmentIndices, visibility) {
     const segRepresentation = SegmentationState.getSegmentationRepresentationByUID(toolGroupId, segmentationRepresentationUID);
@@ -82,5 +59,12 @@ function setSegmentVisibility(toolGroupId, segmentationRepresentationUID, segmen
         : segRepresentation.segmentsHidden.add(segmentIndex);
     triggerSegmentationRepresentationModified(toolGroupId, segmentationRepresentationUID);
 }
-export { setSegmentationVisibility, getSegmentationVisibility, setSegmentVisibility, setSegmentsVisibility, };
+function getSegmentVisibility(toolGroupId, segmentationRepresentationUID, segmentIndex) {
+    const segRepresentation = SegmentationState.getSegmentationRepresentationByUID(toolGroupId, segmentationRepresentationUID);
+    if (!segRepresentation) {
+        return false;
+    }
+    return !segRepresentation.segmentsHidden.has(segmentIndex);
+}
+export { setSegmentationVisibility, getSegmentationVisibility, setSegmentVisibility, setSegmentsVisibility, getSegmentVisibility, };
 //# sourceMappingURL=segmentationVisibility.js.map

package/dist/esm/stateManagement/segmentation/config/segmentationVisibility.js.map

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package/dist/esm/stateManagement/segmentation/convertStackToVolumeSegmentation.js

@@ -0,0 +1,62 @@
+import { volumeLoader, utilities as csUtils, eventTarget, cache, } from '@cornerstonejs/core';
+import { Events, SegmentationRepresentations } from '../../enums';
+import addSegmentationRepresentations from './addSegmentationRepresentations';
+import { triggerSegmentationRender } from '../../utilities/segmentation';
+import { getSegmentation } from './segmentationState';
+import { triggerSegmentationDataModified } from './triggerSegmentationEvents';
+async function computeVolumeSegmentationFromStack({ imageIdReferenceMap, options, }) {
+    const segmentationImageIds = Array.from(imageIdReferenceMap.values());
+    const additionalDetails = {
+        imageIdReferenceMap,
+    };
+    const volumeId = options?.volumeId ?? csUtils.uuidv4();
+    await volumeLoader.createAndCacheVolumeFromImages(volumeId, segmentationImageIds, {
+        additionalDetails,
+    });
+    return { volumeId };
+}
+async function convertStackToVolumeSegmentation({ segmentationId, options, }) {
+    const segmentation = getSegmentation(segmentationId);
+    const data = segmentation.representationData
+        .LABELMAP;
+    const { volumeId } = await computeVolumeSegmentationFromStack({
+        imageIdReferenceMap: data.imageIdReferenceMap,
+        options,
+    });
+    await updateSegmentationState({
+        segmentationId,
+        toolGroupId: options.toolGroupId,
+        options,
+        volumeId,
+    });
+}
+async function updateSegmentationState({ segmentationId, toolGroupId, volumeId, options, }) {
+    const segmentation = getSegmentation(segmentationId);
+    if (options?.removeOriginal) {
+        const data = segmentation.representationData
+            .LABELMAP;
+        const imageIdReferenceMap = data.imageIdReferenceMap;
+        Array.from(imageIdReferenceMap.values()).forEach((imageId) => {
+            cache.removeImageLoadObject(imageId);
+        });
+        segmentation.representationData.LABELMAP = {
+            volumeId,
+        };
+    }
+    else {
+        segmentation.representationData.LABELMAP = {
+            ...segmentation.representationData.LABELMAP,
+            volumeId,
+        };
+    }
+    await addSegmentationRepresentations(toolGroupId, [
+        {
+            segmentationId,
+            type: SegmentationRepresentations.Labelmap,
+        },
+    ]);
+    triggerSegmentationRender(toolGroupId);
+    eventTarget.addEventListenerOnce(Events.SEGMENTATION_RENDERED, () => triggerSegmentationDataModified(segmentationId));
+}
+export { convertStackToVolumeSegmentation, computeVolumeSegmentationFromStack };
+//# sourceMappingURL=convertStackToVolumeSegmentation.js.map

package/dist/esm/stateManagement/segmentation/convertStackToVolumeSegmentation.js.map

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package/dist/esm/stateManagement/segmentation/convertVolumeToStackSegmentation.js

@@ -0,0 +1,96 @@
+import { cache, eventTarget, getRenderingEngines, } from '@cornerstonejs/core';
+import { Events, SegmentationRepresentations } from '../../enums';
+import addSegmentationRepresentations from './addSegmentationRepresentations';
+import { triggerSegmentationRender, createImageIdReferenceMap, } from '../../utilities/segmentation';
+import { getSegmentation } from './segmentationState';
+import { triggerSegmentationDataModified } from './triggerSegmentationEvents';
+export async function computeStackSegmentationFromVolume({ volumeId, }) {
+    const segmentationVolume = cache.getVolume(volumeId);
+    const hasCachedImages = segmentationVolume.imageCacheOffsetMap.size > 0;
+    let isAllImagesCached = false;
+    if (hasCachedImages) {
+        isAllImagesCached = segmentationVolume.imageIds.every((imageId) => cache.getImage(imageId));
+    }
+    const renderingEngine = getRenderingEngines()[0];
+    const volumeUsedInOtherViewports = renderingEngine
+        .getVolumeViewports()
+        .find((vp) => vp.hasVolumeId(volumeId));
+    segmentationVolume.decache(!volumeUsedInOtherViewports && isAllImagesCached);
+    const imageIdReferenceMap = _getImageIdReferenceMapForStackSegmentation(segmentationVolume);
+    return { imageIdReferenceMap };
+}
+export async function convertVolumeToStackSegmentation({ segmentationId, options, }) {
+    const segmentation = getSegmentation(segmentationId);
+    const data = segmentation.representationData
+        .LABELMAP;
+    const { imageIdReferenceMap } = await computeStackSegmentationFromVolume({
+        volumeId: data.volumeId,
+    });
+    await updateStackSegmentationState({
+        segmentationId,
+        toolGroupId: options.toolGroupId,
+        imageIdReferenceMap,
+        options,
+    });
+}
+export async function updateStackSegmentationState({ segmentationId, toolGroupId, imageIdReferenceMap, options, }) {
+    const segmentation = getSegmentation(segmentationId);
+    if (options?.removeOriginal) {
+        const data = segmentation.representationData
+            .LABELMAP;
+        if (cache.getVolume(data.volumeId)) {
+            cache.removeVolumeLoadObject(data.volumeId);
+        }
+        segmentation.representationData.LABELMAP = {
+            imageIdReferenceMap,
+        };
+    }
+    else {
+        segmentation.representationData.LABELMAP = {
+            ...segmentation.representationData.LABELMAP,
+            imageIdReferenceMap,
+        };
+    }
+    await addSegmentationRepresentations(toolGroupId, [
+        {
+            segmentationId,
+            type: SegmentationRepresentations.Labelmap,
+        },
+    ]);
+    triggerSegmentationRender(toolGroupId);
+    eventTarget.addEventListenerOnce(Events.SEGMENTATION_RENDERED, () => triggerSegmentationDataModified(segmentationId));
+}
+function _getImageIdReferenceMapForStackSegmentation(segmentationVolume) {
+    if (segmentationVolume.additionalDetails?.imageIdReferenceMap) {
+        return segmentationVolume.additionalDetails.imageIdReferenceMap;
+    }
+    else if (segmentationVolume.referencedImageIds?.length &&
+        !segmentationVolume.referencedImageIds[0].startsWith('derived')) {
+        const referencedImageIds = segmentationVolume.referencedImageIds;
+        const segmentationImageIds = segmentationVolume.imageIds;
+        return createImageIdReferenceMap(referencedImageIds, [...segmentationImageIds].reverse());
+    }
+    else {
+        const referencedVolumeId = segmentationVolume.referencedVolumeId;
+        const referencedVolume = cache.getVolume(referencedVolumeId);
+        if (!referencedVolume) {
+            throw new Error('Cannot convert volumetric segmentation without referenced volume to stack segmentation yet');
+        }
+        if (!referencedVolume?.imageIds?.length) {
+            throw new Error('Cannot convert volumetric segmentation without imageIds to stack segmentation yet');
+        }
+        if (referencedVolume.imageIds?.[0].startsWith('derived')) {
+            throw new Error(`Cannot convert volume segmentation that is derived from another segmentation
+         to stack segmentation yet, include the additionalDetails.imageIdReferenceMap
+         in the volume segmentation in case you need it for the conversion`);
+        }
+        const referencedImageIds = referencedVolume.imageIds;
+        let segmentationImageIdsToUse = segmentationVolume.imageIds;
+        if (!segmentationImageIdsToUse?.length) {
+            segmentationImageIdsToUse =
+                segmentationVolume.convertToImageSlicesAndCache();
+        }
+        return createImageIdReferenceMap(referencedImageIds, [...segmentationImageIdsToUse].reverse());
+    }
+}
+//# sourceMappingURL=convertVolumeToStackSegmentation.js.map

package/dist/esm/stateManagement/segmentation/convertVolumeToStackSegmentation.js.map

@@ -0,0 +1 @@
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