@cleocode/core 2026.4.13 → 2026.4.14

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (909) hide show
  1. package/dist/index.js +69233 -175
  2. package/dist/index.js.map +7 -1
  3. package/dist/init.d.ts.map +1 -1
  4. package/dist/internal.d.ts +16 -5
  5. package/dist/internal.d.ts.map +1 -1
  6. package/dist/memory/brain-embedding.d.ts +1 -1
  7. package/dist/memory/embedding-local.d.ts +8 -3
  8. package/dist/memory/embedding-local.d.ts.map +1 -1
  9. package/dist/memory/embedding-worker.d.ts +1 -1
  10. package/dist/memory/learnings.d.ts +2 -2
  11. package/dist/memory/patterns.d.ts +6 -6
  12. package/dist/store/agent-registry-accessor.d.ts +54 -1
  13. package/dist/store/agent-registry-accessor.d.ts.map +1 -1
  14. package/dist/store/backup-crypto.d.ts +89 -0
  15. package/dist/store/backup-crypto.d.ts.map +1 -0
  16. package/dist/store/backup-pack.d.ts +91 -0
  17. package/dist/store/backup-pack.d.ts.map +1 -0
  18. package/dist/store/backup-unpack.d.ts +140 -0
  19. package/dist/store/backup-unpack.d.ts.map +1 -0
  20. package/dist/store/migrate-signaldock-to-conduit.d.ts.map +1 -1
  21. package/dist/store/regenerators.d.ts +126 -0
  22. package/dist/store/regenerators.d.ts.map +1 -0
  23. package/dist/store/restore-conflict-report.d.ts +118 -0
  24. package/dist/store/restore-conflict-report.d.ts.map +1 -0
  25. package/dist/store/restore-json-merge.d.ts +187 -0
  26. package/dist/store/restore-json-merge.d.ts.map +1 -0
  27. package/dist/store/sqlite-backup.d.ts +60 -5
  28. package/dist/store/sqlite-backup.d.ts.map +1 -1
  29. package/dist/store/t310-readiness.d.ts +83 -0
  30. package/dist/store/t310-readiness.d.ts.map +1 -0
  31. package/package.json +9 -9
  32. package/src/__tests__/cli-parity.test.ts +19 -14
  33. package/src/__tests__/human-output.test.ts +13 -11
  34. package/src/init.ts +18 -8
  35. package/src/internal.ts +4 -1
  36. package/src/memory/__tests__/brain-automation.test.ts +2 -2
  37. package/src/memory/brain-embedding.ts +1 -1
  38. package/src/memory/embedding-local.ts +10 -5
  39. package/src/memory/embedding-worker.ts +1 -1
  40. package/src/skills/__tests__/discovery.test.ts +22 -7
  41. package/src/store/__tests__/performance-safety.test.ts +11 -5
  42. package/src/store/migrate-signaldock-to-conduit.ts +14 -7
  43. package/src/validation/protocols/_shared.ts +1 -1
  44. package/dist/adapters/adapter-registry.js +0 -64
  45. package/dist/adapters/adapter-registry.js.map +0 -1
  46. package/dist/adapters/discovery.js +0 -83
  47. package/dist/adapters/discovery.js.map +0 -1
  48. package/dist/adapters/index.js +0 -9
  49. package/dist/adapters/index.js.map +0 -1
  50. package/dist/adapters/manager.js +0 -260
  51. package/dist/adapters/manager.js.map +0 -1
  52. package/dist/admin/export-tasks.js +0 -171
  53. package/dist/admin/export-tasks.js.map +0 -1
  54. package/dist/admin/export.js +0 -103
  55. package/dist/admin/export.js.map +0 -1
  56. package/dist/admin/help.js +0 -106
  57. package/dist/admin/help.js.map +0 -1
  58. package/dist/admin/import-tasks.js +0 -182
  59. package/dist/admin/import-tasks.js.map +0 -1
  60. package/dist/admin/import.js +0 -129
  61. package/dist/admin/import.js.map +0 -1
  62. package/dist/admin/index.js +0 -13
  63. package/dist/admin/index.js.map +0 -1
  64. package/dist/adrs/find.js +0 -134
  65. package/dist/adrs/find.js.map +0 -1
  66. package/dist/adrs/index.js +0 -15
  67. package/dist/adrs/index.js.map +0 -1
  68. package/dist/adrs/link-pipeline.js +0 -160
  69. package/dist/adrs/link-pipeline.js.map +0 -1
  70. package/dist/adrs/list.js +0 -43
  71. package/dist/adrs/list.js.map +0 -1
  72. package/dist/adrs/parse.js +0 -51
  73. package/dist/adrs/parse.js.map +0 -1
  74. package/dist/adrs/show.js +0 -22
  75. package/dist/adrs/show.js.map +0 -1
  76. package/dist/adrs/sync.js +0 -188
  77. package/dist/adrs/sync.js.map +0 -1
  78. package/dist/adrs/types.js +0 -9
  79. package/dist/adrs/types.js.map +0 -1
  80. package/dist/adrs/validate.js +0 -57
  81. package/dist/adrs/validate.js.map +0 -1
  82. package/dist/agents/agent-registry.js +0 -288
  83. package/dist/agents/agent-registry.js.map +0 -1
  84. package/dist/agents/agent-schema.js +0 -82
  85. package/dist/agents/agent-schema.js.map +0 -1
  86. package/dist/agents/capacity.js +0 -116
  87. package/dist/agents/capacity.js.map +0 -1
  88. package/dist/agents/execution-learning.js +0 -474
  89. package/dist/agents/execution-learning.js.map +0 -1
  90. package/dist/agents/health-monitor.js +0 -217
  91. package/dist/agents/health-monitor.js.map +0 -1
  92. package/dist/agents/index.js +0 -29
  93. package/dist/agents/index.js.map +0 -1
  94. package/dist/agents/registry.js +0 -314
  95. package/dist/agents/registry.js.map +0 -1
  96. package/dist/agents/retry.js +0 -215
  97. package/dist/agents/retry.js.map +0 -1
  98. package/dist/audit-prune.js +0 -94
  99. package/dist/audit-prune.js.map +0 -1
  100. package/dist/audit.js +0 -68
  101. package/dist/audit.js.map +0 -1
  102. package/dist/backfill/index.js +0 -229
  103. package/dist/backfill/index.js.map +0 -1
  104. package/dist/bootstrap.js +0 -344
  105. package/dist/bootstrap.js.map +0 -1
  106. package/dist/caamp/adapter.js +0 -259
  107. package/dist/caamp/adapter.js.map +0 -1
  108. package/dist/caamp/capability-check.js +0 -38
  109. package/dist/caamp/capability-check.js.map +0 -1
  110. package/dist/caamp/index.js +0 -21
  111. package/dist/caamp/index.js.map +0 -1
  112. package/dist/caamp-init.js +0 -16
  113. package/dist/caamp-init.js.map +0 -1
  114. package/dist/cleo.js +0 -322
  115. package/dist/cleo.js.map +0 -1
  116. package/dist/code/index.js +0 -10
  117. package/dist/code/index.js.map +0 -1
  118. package/dist/code/outline.js +0 -165
  119. package/dist/code/outline.js.map +0 -1
  120. package/dist/code/parser.js +0 -295
  121. package/dist/code/parser.js.map +0 -1
  122. package/dist/code/search.js +0 -135
  123. package/dist/code/search.js.map +0 -1
  124. package/dist/code/unfold.js +0 -155
  125. package/dist/code/unfold.js.map +0 -1
  126. package/dist/codebase-map/analyzers/architecture.js +0 -129
  127. package/dist/codebase-map/analyzers/architecture.js.map +0 -1
  128. package/dist/codebase-map/analyzers/concerns.js +0 -122
  129. package/dist/codebase-map/analyzers/concerns.js.map +0 -1
  130. package/dist/codebase-map/analyzers/conventions.js +0 -149
  131. package/dist/codebase-map/analyzers/conventions.js.map +0 -1
  132. package/dist/codebase-map/analyzers/integrations.js +0 -108
  133. package/dist/codebase-map/analyzers/integrations.js.map +0 -1
  134. package/dist/codebase-map/analyzers/stack.js +0 -117
  135. package/dist/codebase-map/analyzers/stack.js.map +0 -1
  136. package/dist/codebase-map/analyzers/structure.js +0 -137
  137. package/dist/codebase-map/analyzers/structure.js.map +0 -1
  138. package/dist/codebase-map/analyzers/testing.js +0 -118
  139. package/dist/codebase-map/analyzers/testing.js.map +0 -1
  140. package/dist/codebase-map/index.js +0 -57
  141. package/dist/codebase-map/index.js.map +0 -1
  142. package/dist/codebase-map/store.js +0 -122
  143. package/dist/codebase-map/store.js.map +0 -1
  144. package/dist/codebase-map/summary.js +0 -152
  145. package/dist/codebase-map/summary.js.map +0 -1
  146. package/dist/compliance/index.js +0 -288
  147. package/dist/compliance/index.js.map +0 -1
  148. package/dist/compliance/protocol-enforcement.js +0 -332
  149. package/dist/compliance/protocol-enforcement.js.map +0 -1
  150. package/dist/compliance/protocol-rules.js +0 -786
  151. package/dist/compliance/protocol-rules.js.map +0 -1
  152. package/dist/compliance/protocol-types.js +0 -79
  153. package/dist/compliance/protocol-types.js.map +0 -1
  154. package/dist/compliance/store.js +0 -53
  155. package/dist/compliance/store.js.map +0 -1
  156. package/dist/conduit/conduit-client.js +0 -107
  157. package/dist/conduit/conduit-client.js.map +0 -1
  158. package/dist/conduit/factory.js +0 -52
  159. package/dist/conduit/factory.js.map +0 -1
  160. package/dist/conduit/http-transport.js +0 -155
  161. package/dist/conduit/http-transport.js.map +0 -1
  162. package/dist/conduit/index.js +0 -15
  163. package/dist/conduit/index.js.map +0 -1
  164. package/dist/conduit/local-transport.js +0 -255
  165. package/dist/conduit/local-transport.js.map +0 -1
  166. package/dist/conduit/sse-transport.js +0 -299
  167. package/dist/conduit/sse-transport.js.map +0 -1
  168. package/dist/config/build-config.js +0 -29
  169. package/dist/config/build-config.js.map +0 -1
  170. package/dist/config.js +0 -400
  171. package/dist/config.js.map +0 -1
  172. package/dist/constants.js +0 -18
  173. package/dist/constants.js.map +0 -1
  174. package/dist/context/index.js +0 -137
  175. package/dist/context/index.js.map +0 -1
  176. package/dist/crypto/credentials.js +0 -191
  177. package/dist/crypto/credentials.js.map +0 -1
  178. package/dist/discovery.js +0 -182
  179. package/dist/discovery.js.map +0 -1
  180. package/dist/engine-result.js +0 -12
  181. package/dist/engine-result.js.map +0 -1
  182. package/dist/error-catalog.js +0 -404
  183. package/dist/error-catalog.js.map +0 -1
  184. package/dist/error-registry.js +0 -393
  185. package/dist/error-registry.js.map +0 -1
  186. package/dist/errors.js +0 -173
  187. package/dist/errors.js.map +0 -1
  188. package/dist/hooks/handlers/agent-hooks.js +0 -106
  189. package/dist/hooks/handlers/agent-hooks.js.map +0 -1
  190. package/dist/hooks/handlers/context-hooks.js +0 -111
  191. package/dist/hooks/handlers/context-hooks.js.map +0 -1
  192. package/dist/hooks/handlers/error-hooks.js +0 -52
  193. package/dist/hooks/handlers/error-hooks.js.map +0 -1
  194. package/dist/hooks/handlers/file-hooks.js +0 -104
  195. package/dist/hooks/handlers/file-hooks.js.map +0 -1
  196. package/dist/hooks/handlers/handler-helpers.js +0 -61
  197. package/dist/hooks/handlers/handler-helpers.js.map +0 -1
  198. package/dist/hooks/handlers/index.js +0 -28
  199. package/dist/hooks/handlers/index.js.map +0 -1
  200. package/dist/hooks/handlers/memory-bridge-refresh.js +0 -42
  201. package/dist/hooks/handlers/memory-bridge-refresh.js.map +0 -1
  202. package/dist/hooks/handlers/notification-hooks.js +0 -62
  203. package/dist/hooks/handlers/notification-hooks.js.map +0 -1
  204. package/dist/hooks/handlers/session-hooks.js +0 -142
  205. package/dist/hooks/handlers/session-hooks.js.map +0 -1
  206. package/dist/hooks/handlers/task-hooks.js +0 -65
  207. package/dist/hooks/handlers/task-hooks.js.map +0 -1
  208. package/dist/hooks/handlers/work-capture-hooks.js +0 -165
  209. package/dist/hooks/handlers/work-capture-hooks.js.map +0 -1
  210. package/dist/hooks/index.js +0 -13
  211. package/dist/hooks/index.js.map +0 -1
  212. package/dist/hooks/payload-schemas.js +0 -220
  213. package/dist/hooks/payload-schemas.js.map +0 -1
  214. package/dist/hooks/provider-hooks.js +0 -66
  215. package/dist/hooks/provider-hooks.js.map +0 -1
  216. package/dist/hooks/registry.js +0 -229
  217. package/dist/hooks/registry.js.map +0 -1
  218. package/dist/hooks/types.js +0 -66
  219. package/dist/hooks/types.js.map +0 -1
  220. package/dist/hooks.js +0 -136
  221. package/dist/hooks.js.map +0 -1
  222. package/dist/init.js +0 -851
  223. package/dist/init.js.map +0 -1
  224. package/dist/inject/index.js +0 -82
  225. package/dist/inject/index.js.map +0 -1
  226. package/dist/injection.js +0 -343
  227. package/dist/injection.js.map +0 -1
  228. package/dist/intelligence/adaptive-validation.js +0 -497
  229. package/dist/intelligence/adaptive-validation.js.map +0 -1
  230. package/dist/intelligence/impact.js +0 -675
  231. package/dist/intelligence/impact.js.map +0 -1
  232. package/dist/intelligence/index.js +0 -22
  233. package/dist/intelligence/index.js.map +0 -1
  234. package/dist/intelligence/patterns.js +0 -492
  235. package/dist/intelligence/patterns.js.map +0 -1
  236. package/dist/intelligence/prediction.js +0 -499
  237. package/dist/intelligence/prediction.js.map +0 -1
  238. package/dist/intelligence/types.js +0 -13
  239. package/dist/intelligence/types.js.map +0 -1
  240. package/dist/internal.js +0 -306
  241. package/dist/internal.js.map +0 -1
  242. package/dist/issue/create.js +0 -121
  243. package/dist/issue/create.js.map +0 -1
  244. package/dist/issue/diagnostics.js +0 -59
  245. package/dist/issue/diagnostics.js.map +0 -1
  246. package/dist/issue/index.js +0 -10
  247. package/dist/issue/index.js.map +0 -1
  248. package/dist/issue/template-parser.js +0 -267
  249. package/dist/issue/template-parser.js.map +0 -1
  250. package/dist/json-schema-validator.js +0 -76
  251. package/dist/json-schema-validator.js.map +0 -1
  252. package/dist/lib/index.js +0 -11
  253. package/dist/lib/index.js.map +0 -1
  254. package/dist/lib/retry.js +0 -152
  255. package/dist/lib/retry.js.map +0 -1
  256. package/dist/lib/tree-sitter-languages.js +0 -71
  257. package/dist/lib/tree-sitter-languages.js.map +0 -1
  258. package/dist/lifecycle/chain-composition.js +0 -152
  259. package/dist/lifecycle/chain-composition.js.map +0 -1
  260. package/dist/lifecycle/chain-store.js +0 -246
  261. package/dist/lifecycle/chain-store.js.map +0 -1
  262. package/dist/lifecycle/consolidate-rcasd.js +0 -352
  263. package/dist/lifecycle/consolidate-rcasd.js.map +0 -1
  264. package/dist/lifecycle/default-chain.js +0 -176
  265. package/dist/lifecycle/default-chain.js.map +0 -1
  266. package/dist/lifecycle/evidence.js +0 -180
  267. package/dist/lifecycle/evidence.js.map +0 -1
  268. package/dist/lifecycle/frontmatter.js +0 -363
  269. package/dist/lifecycle/frontmatter.js.map +0 -1
  270. package/dist/lifecycle/index.js +0 -756
  271. package/dist/lifecycle/index.js.map +0 -1
  272. package/dist/lifecycle/pipeline.js +0 -656
  273. package/dist/lifecycle/pipeline.js.map +0 -1
  274. package/dist/lifecycle/rcasd-index.js +0 -326
  275. package/dist/lifecycle/rcasd-index.js.map +0 -1
  276. package/dist/lifecycle/rcasd-paths.js +0 -220
  277. package/dist/lifecycle/rcasd-paths.js.map +0 -1
  278. package/dist/lifecycle/resume.js +0 -864
  279. package/dist/lifecycle/resume.js.map +0 -1
  280. package/dist/lifecycle/stage-artifacts.js +0 -94
  281. package/dist/lifecycle/stage-artifacts.js.map +0 -1
  282. package/dist/lifecycle/stage-guidance.js +0 -234
  283. package/dist/lifecycle/stage-guidance.js.map +0 -1
  284. package/dist/lifecycle/stages.js +0 -534
  285. package/dist/lifecycle/stages.js.map +0 -1
  286. package/dist/lifecycle/state-machine.js +0 -516
  287. package/dist/lifecycle/state-machine.js.map +0 -1
  288. package/dist/lifecycle/tessera-engine.js +0 -249
  289. package/dist/lifecycle/tessera-engine.js.map +0 -1
  290. package/dist/logger.js +0 -140
  291. package/dist/logger.js.map +0 -1
  292. package/dist/memory/auto-extract.js +0 -177
  293. package/dist/memory/auto-extract.js.map +0 -1
  294. package/dist/memory/brain-embedding.js +0 -66
  295. package/dist/memory/brain-embedding.js.map +0 -1
  296. package/dist/memory/brain-lifecycle.js +0 -298
  297. package/dist/memory/brain-lifecycle.js.map +0 -1
  298. package/dist/memory/brain-links.js +0 -161
  299. package/dist/memory/brain-links.js.map +0 -1
  300. package/dist/memory/brain-maintenance.js +0 -114
  301. package/dist/memory/brain-maintenance.js.map +0 -1
  302. package/dist/memory/brain-migration.js +0 -149
  303. package/dist/memory/brain-migration.js.map +0 -1
  304. package/dist/memory/brain-reasoning.js +0 -215
  305. package/dist/memory/brain-reasoning.js.map +0 -1
  306. package/dist/memory/brain-retrieval.js +0 -542
  307. package/dist/memory/brain-retrieval.js.map +0 -1
  308. package/dist/memory/brain-row-types.js +0 -10
  309. package/dist/memory/brain-row-types.js.map +0 -1
  310. package/dist/memory/brain-search.js +0 -519
  311. package/dist/memory/brain-search.js.map +0 -1
  312. package/dist/memory/brain-similarity.js +0 -145
  313. package/dist/memory/brain-similarity.js.map +0 -1
  314. package/dist/memory/claude-mem-migration.js +0 -277
  315. package/dist/memory/claude-mem-migration.js.map +0 -1
  316. package/dist/memory/decisions.js +0 -162
  317. package/dist/memory/decisions.js.map +0 -1
  318. package/dist/memory/embedding-local.js +0 -97
  319. package/dist/memory/embedding-local.js.map +0 -1
  320. package/dist/memory/embedding-queue.js +0 -271
  321. package/dist/memory/embedding-queue.js.map +0 -1
  322. package/dist/memory/embedding-worker.js +0 -58
  323. package/dist/memory/embedding-worker.js.map +0 -1
  324. package/dist/memory/engine-compat.js +0 -1397
  325. package/dist/memory/engine-compat.js.map +0 -1
  326. package/dist/memory/index.js +0 -1140
  327. package/dist/memory/index.js.map +0 -1
  328. package/dist/memory/learnings.js +0 -121
  329. package/dist/memory/learnings.js.map +0 -1
  330. package/dist/memory/memory-bridge.js +0 -370
  331. package/dist/memory/memory-bridge.js.map +0 -1
  332. package/dist/memory/patterns.js +0 -122
  333. package/dist/memory/patterns.js.map +0 -1
  334. package/dist/memory/pipeline-manifest-sqlite.js +0 -975
  335. package/dist/memory/pipeline-manifest-sqlite.js.map +0 -1
  336. package/dist/memory/session-memory.js +0 -331
  337. package/dist/memory/session-memory.js.map +0 -1
  338. package/dist/metrics/ab-test.js +0 -260
  339. package/dist/metrics/ab-test.js.map +0 -1
  340. package/dist/metrics/aggregation.js +0 -363
  341. package/dist/metrics/aggregation.js.map +0 -1
  342. package/dist/metrics/common.js +0 -64
  343. package/dist/metrics/common.js.map +0 -1
  344. package/dist/metrics/enums.js +0 -78
  345. package/dist/metrics/enums.js.map +0 -1
  346. package/dist/metrics/index.js +0 -19
  347. package/dist/metrics/index.js.map +0 -1
  348. package/dist/metrics/model-provider-registry.js +0 -88
  349. package/dist/metrics/model-provider-registry.js.map +0 -1
  350. package/dist/metrics/otel-integration.js +0 -263
  351. package/dist/metrics/otel-integration.js.map +0 -1
  352. package/dist/metrics/provider-detection.js +0 -103
  353. package/dist/metrics/provider-detection.js.map +0 -1
  354. package/dist/metrics/token-estimation.js +0 -253
  355. package/dist/metrics/token-estimation.js.map +0 -1
  356. package/dist/metrics/token-service.js +0 -450
  357. package/dist/metrics/token-service.js.map +0 -1
  358. package/dist/migration/agent-outputs.js +0 -316
  359. package/dist/migration/agent-outputs.js.map +0 -1
  360. package/dist/migration/checksum.js +0 -92
  361. package/dist/migration/checksum.js.map +0 -1
  362. package/dist/migration/index.js +0 -282
  363. package/dist/migration/index.js.map +0 -1
  364. package/dist/migration/logger.js +0 -360
  365. package/dist/migration/logger.js.map +0 -1
  366. package/dist/migration/preflight.js +0 -9
  367. package/dist/migration/preflight.js.map +0 -1
  368. package/dist/migration/state.js +0 -421
  369. package/dist/migration/state.js.map +0 -1
  370. package/dist/migration/validate.js +0 -241
  371. package/dist/migration/validate.js.map +0 -1
  372. package/dist/mvi-helpers.js +0 -74
  373. package/dist/mvi-helpers.js.map +0 -1
  374. package/dist/nexus/deps.js +0 -375
  375. package/dist/nexus/deps.js.map +0 -1
  376. package/dist/nexus/discover.js +0 -288
  377. package/dist/nexus/discover.js.map +0 -1
  378. package/dist/nexus/hash.js +0 -10
  379. package/dist/nexus/hash.js.map +0 -1
  380. package/dist/nexus/index.js +0 -40
  381. package/dist/nexus/index.js.map +0 -1
  382. package/dist/nexus/migrate-json-to-sqlite.js +0 -115
  383. package/dist/nexus/migrate-json-to-sqlite.js.map +0 -1
  384. package/dist/nexus/permissions.js +0 -105
  385. package/dist/nexus/permissions.js.map +0 -1
  386. package/dist/nexus/query.js +0 -175
  387. package/dist/nexus/query.js.map +0 -1
  388. package/dist/nexus/registry.js +0 -584
  389. package/dist/nexus/registry.js.map +0 -1
  390. package/dist/nexus/sharing/index.js +0 -288
  391. package/dist/nexus/sharing/index.js.map +0 -1
  392. package/dist/nexus/transfer-types.js +0 -8
  393. package/dist/nexus/transfer-types.js.map +0 -1
  394. package/dist/nexus/transfer.js +0 -263
  395. package/dist/nexus/transfer.js.map +0 -1
  396. package/dist/nexus/workspace.js +0 -355
  397. package/dist/nexus/workspace.js.map +0 -1
  398. package/dist/observability/index.js +0 -103
  399. package/dist/observability/index.js.map +0 -1
  400. package/dist/observability/log-filter.js +0 -63
  401. package/dist/observability/log-filter.js.map +0 -1
  402. package/dist/observability/log-parser.js +0 -99
  403. package/dist/observability/log-parser.js.map +0 -1
  404. package/dist/observability/log-reader.js +0 -139
  405. package/dist/observability/log-reader.js.map +0 -1
  406. package/dist/observability/types.js +0 -19
  407. package/dist/observability/types.js.map +0 -1
  408. package/dist/orchestration/analyze.js +0 -107
  409. package/dist/orchestration/analyze.js.map +0 -1
  410. package/dist/orchestration/bootstrap.js +0 -132
  411. package/dist/orchestration/bootstrap.js.map +0 -1
  412. package/dist/orchestration/context.js +0 -56
  413. package/dist/orchestration/context.js.map +0 -1
  414. package/dist/orchestration/critical-path.js +0 -100
  415. package/dist/orchestration/critical-path.js.map +0 -1
  416. package/dist/orchestration/hierarchy.js +0 -183
  417. package/dist/orchestration/hierarchy.js.map +0 -1
  418. package/dist/orchestration/index.js +0 -287
  419. package/dist/orchestration/index.js.map +0 -1
  420. package/dist/orchestration/parallel.js +0 -89
  421. package/dist/orchestration/parallel.js.map +0 -1
  422. package/dist/orchestration/protocol-validators.js +0 -815
  423. package/dist/orchestration/protocol-validators.js.map +0 -1
  424. package/dist/orchestration/skill-ops.js +0 -98
  425. package/dist/orchestration/skill-ops.js.map +0 -1
  426. package/dist/orchestration/status.js +0 -107
  427. package/dist/orchestration/status.js.map +0 -1
  428. package/dist/orchestration/unblock.js +0 -103
  429. package/dist/orchestration/unblock.js.map +0 -1
  430. package/dist/orchestration/validate-spawn.js +0 -67
  431. package/dist/orchestration/validate-spawn.js.map +0 -1
  432. package/dist/orchestration/waves.js +0 -86
  433. package/dist/orchestration/waves.js.map +0 -1
  434. package/dist/otel/index.js +0 -163
  435. package/dist/otel/index.js.map +0 -1
  436. package/dist/output.js +0 -164
  437. package/dist/output.js.map +0 -1
  438. package/dist/pagination.js +0 -64
  439. package/dist/pagination.js.map +0 -1
  440. package/dist/paths.js +0 -842
  441. package/dist/paths.js.map +0 -1
  442. package/dist/phases/deps.js +0 -372
  443. package/dist/phases/deps.js.map +0 -1
  444. package/dist/phases/index.js +0 -349
  445. package/dist/phases/index.js.map +0 -1
  446. package/dist/pipeline/index.js +0 -10
  447. package/dist/pipeline/index.js.map +0 -1
  448. package/dist/pipeline/phase.js +0 -45
  449. package/dist/pipeline/phase.js.map +0 -1
  450. package/dist/platform.js +0 -211
  451. package/dist/platform.js.map +0 -1
  452. package/dist/project-info.js +0 -84
  453. package/dist/project-info.js.map +0 -1
  454. package/dist/reconciliation/index.js +0 -10
  455. package/dist/reconciliation/index.js.map +0 -1
  456. package/dist/reconciliation/link-store.js +0 -129
  457. package/dist/reconciliation/link-store.js.map +0 -1
  458. package/dist/reconciliation/reconciliation-engine.js +0 -298
  459. package/dist/reconciliation/reconciliation-engine.js.map +0 -1
  460. package/dist/release/artifacts.js +0 -427
  461. package/dist/release/artifacts.js.map +0 -1
  462. package/dist/release/changelog-writer.js +0 -151
  463. package/dist/release/changelog-writer.js.map +0 -1
  464. package/dist/release/channel.js +0 -144
  465. package/dist/release/channel.js.map +0 -1
  466. package/dist/release/ci.js +0 -166
  467. package/dist/release/ci.js.map +0 -1
  468. package/dist/release/github-pr.js +0 -225
  469. package/dist/release/github-pr.js.map +0 -1
  470. package/dist/release/guards.js +0 -116
  471. package/dist/release/guards.js.map +0 -1
  472. package/dist/release/index.js +0 -22
  473. package/dist/release/index.js.map +0 -1
  474. package/dist/release/release-config.js +0 -158
  475. package/dist/release/release-config.js.map +0 -1
  476. package/dist/release/release-manifest.js +0 -1019
  477. package/dist/release/release-manifest.js.map +0 -1
  478. package/dist/release/version-bump.js +0 -255
  479. package/dist/release/version-bump.js.map +0 -1
  480. package/dist/remote/index.js +0 -257
  481. package/dist/remote/index.js.map +0 -1
  482. package/dist/repair.js +0 -130
  483. package/dist/repair.js.map +0 -1
  484. package/dist/research/index.js +0 -2
  485. package/dist/research/index.js.map +0 -1
  486. package/dist/roadmap/index.js +0 -59
  487. package/dist/roadmap/index.js.map +0 -1
  488. package/dist/routing/capability-matrix.js +0 -1556
  489. package/dist/routing/capability-matrix.js.map +0 -1
  490. package/dist/routing/index.js +0 -9
  491. package/dist/routing/index.js.map +0 -1
  492. package/dist/scaffold.js +0 -1759
  493. package/dist/scaffold.js.map +0 -1
  494. package/dist/schema-management.js +0 -295
  495. package/dist/schema-management.js.map +0 -1
  496. package/dist/security/index.js +0 -9
  497. package/dist/security/index.js.map +0 -1
  498. package/dist/security/input-sanitization.js +0 -321
  499. package/dist/security/input-sanitization.js.map +0 -1
  500. package/dist/sequence/index.js +0 -295
  501. package/dist/sequence/index.js.map +0 -1
  502. package/dist/sessions/assumptions.js +0 -54
  503. package/dist/sessions/assumptions.js.map +0 -1
  504. package/dist/sessions/briefing.js +0 -377
  505. package/dist/sessions/briefing.js.map +0 -1
  506. package/dist/sessions/context-alert.js +0 -222
  507. package/dist/sessions/context-alert.js.map +0 -1
  508. package/dist/sessions/context-inject.js +0 -61
  509. package/dist/sessions/context-inject.js.map +0 -1
  510. package/dist/sessions/context-monitor.js +0 -98
  511. package/dist/sessions/context-monitor.js.map +0 -1
  512. package/dist/sessions/decisions.js +0 -65
  513. package/dist/sessions/decisions.js.map +0 -1
  514. package/dist/sessions/find.js +0 -65
  515. package/dist/sessions/find.js.map +0 -1
  516. package/dist/sessions/handoff.js +0 -328
  517. package/dist/sessions/handoff.js.map +0 -1
  518. package/dist/sessions/hitl-warnings.js +0 -254
  519. package/dist/sessions/hitl-warnings.js.map +0 -1
  520. package/dist/sessions/index.js +0 -327
  521. package/dist/sessions/index.js.map +0 -1
  522. package/dist/sessions/session-archive.js +0 -40
  523. package/dist/sessions/session-archive.js.map +0 -1
  524. package/dist/sessions/session-cleanup.js +0 -59
  525. package/dist/sessions/session-cleanup.js.map +0 -1
  526. package/dist/sessions/session-drift.js +0 -134
  527. package/dist/sessions/session-drift.js.map +0 -1
  528. package/dist/sessions/session-enforcement.js +0 -144
  529. package/dist/sessions/session-enforcement.js.map +0 -1
  530. package/dist/sessions/session-grade.js +0 -253
  531. package/dist/sessions/session-grade.js.map +0 -1
  532. package/dist/sessions/session-history.js +0 -42
  533. package/dist/sessions/session-history.js.map +0 -1
  534. package/dist/sessions/session-id.js +0 -81
  535. package/dist/sessions/session-id.js.map +0 -1
  536. package/dist/sessions/session-memory-bridge.js +0 -52
  537. package/dist/sessions/session-memory-bridge.js.map +0 -1
  538. package/dist/sessions/session-show.js +0 -24
  539. package/dist/sessions/session-show.js.map +0 -1
  540. package/dist/sessions/session-stats.js +0 -69
  541. package/dist/sessions/session-stats.js.map +0 -1
  542. package/dist/sessions/session-suspend.js +0 -39
  543. package/dist/sessions/session-suspend.js.map +0 -1
  544. package/dist/sessions/session-switch.js +0 -51
  545. package/dist/sessions/session-switch.js.map +0 -1
  546. package/dist/sessions/session-view.js +0 -76
  547. package/dist/sessions/session-view.js.map +0 -1
  548. package/dist/sessions/snapshot.js +0 -213
  549. package/dist/sessions/snapshot.js.map +0 -1
  550. package/dist/sessions/statusline-setup.js +0 -85
  551. package/dist/sessions/statusline-setup.js.map +0 -1
  552. package/dist/sessions/types.js +0 -8
  553. package/dist/sessions/types.js.map +0 -1
  554. package/dist/skills/agents/config.js +0 -94
  555. package/dist/skills/agents/config.js.map +0 -1
  556. package/dist/skills/agents/install.js +0 -116
  557. package/dist/skills/agents/install.js.map +0 -1
  558. package/dist/skills/agents/registry.js +0 -161
  559. package/dist/skills/agents/registry.js.map +0 -1
  560. package/dist/skills/discovery.js +0 -333
  561. package/dist/skills/discovery.js.map +0 -1
  562. package/dist/skills/dispatch.js +0 -347
  563. package/dist/skills/dispatch.js.map +0 -1
  564. package/dist/skills/dynamic-skill-generator.js +0 -87
  565. package/dist/skills/dynamic-skill-generator.js.map +0 -1
  566. package/dist/skills/index.js +0 -44
  567. package/dist/skills/index.js.map +0 -1
  568. package/dist/skills/injection/subagent.js +0 -195
  569. package/dist/skills/injection/subagent.js.map +0 -1
  570. package/dist/skills/injection/token.js +0 -260
  571. package/dist/skills/injection/token.js.map +0 -1
  572. package/dist/skills/install.js +0 -40
  573. package/dist/skills/install.js.map +0 -1
  574. package/dist/skills/manifests/contribution.js +0 -175
  575. package/dist/skills/manifests/contribution.js.map +0 -1
  576. package/dist/skills/manifests/research.js +0 -281
  577. package/dist/skills/manifests/research.js.map +0 -1
  578. package/dist/skills/manifests/resolver.js +0 -146
  579. package/dist/skills/manifests/resolver.js.map +0 -1
  580. package/dist/skills/marketplace.js +0 -90
  581. package/dist/skills/marketplace.js.map +0 -1
  582. package/dist/skills/orchestrator/spawn.js +0 -178
  583. package/dist/skills/orchestrator/spawn.js.map +0 -1
  584. package/dist/skills/orchestrator/startup.js +0 -451
  585. package/dist/skills/orchestrator/startup.js.map +0 -1
  586. package/dist/skills/orchestrator/validator.js +0 -301
  587. package/dist/skills/orchestrator/validator.js.map +0 -1
  588. package/dist/skills/precedence-integration.js +0 -73
  589. package/dist/skills/precedence-integration.js.map +0 -1
  590. package/dist/skills/precedence-types.js +0 -16
  591. package/dist/skills/precedence-types.js.map +0 -1
  592. package/dist/skills/routing-table.js +0 -63
  593. package/dist/skills/routing-table.js.map +0 -1
  594. package/dist/skills/skill-paths.js +0 -217
  595. package/dist/skills/skill-paths.js.map +0 -1
  596. package/dist/skills/test-utility.js +0 -55
  597. package/dist/skills/test-utility.js.map +0 -1
  598. package/dist/skills/types.js +0 -118
  599. package/dist/skills/types.js.map +0 -1
  600. package/dist/skills/validation.js +0 -183
  601. package/dist/skills/validation.js.map +0 -1
  602. package/dist/skills/version.js +0 -57
  603. package/dist/skills/version.js.map +0 -1
  604. package/dist/snapshot/index.js +0 -188
  605. package/dist/snapshot/index.js.map +0 -1
  606. package/dist/spawn/adapter-registry.js +0 -246
  607. package/dist/spawn/adapter-registry.js.map +0 -1
  608. package/dist/spawn/index.js +0 -10
  609. package/dist/spawn/index.js.map +0 -1
  610. package/dist/stats/index.js +0 -343
  611. package/dist/stats/index.js.map +0 -1
  612. package/dist/stats/workflow-telemetry.js +0 -400
  613. package/dist/stats/workflow-telemetry.js.map +0 -1
  614. package/dist/sticky/archive.js +0 -47
  615. package/dist/sticky/archive.js.map +0 -1
  616. package/dist/sticky/convert.js +0 -235
  617. package/dist/sticky/convert.js.map +0 -1
  618. package/dist/sticky/create.js +0 -48
  619. package/dist/sticky/create.js.map +0 -1
  620. package/dist/sticky/id.js +0 -35
  621. package/dist/sticky/id.js.map +0 -1
  622. package/dist/sticky/index.js +0 -16
  623. package/dist/sticky/index.js.map +0 -1
  624. package/dist/sticky/list.js +0 -44
  625. package/dist/sticky/list.js.map +0 -1
  626. package/dist/sticky/purge.js +0 -45
  627. package/dist/sticky/purge.js.map +0 -1
  628. package/dist/sticky/show.js +0 -42
  629. package/dist/sticky/show.js.map +0 -1
  630. package/dist/sticky/types.js +0 -10
  631. package/dist/sticky/types.js.map +0 -1
  632. package/dist/store/agent-registry-accessor.js +0 -783
  633. package/dist/store/agent-registry-accessor.js.map +0 -1
  634. package/dist/store/api-key-kdf.js +0 -84
  635. package/dist/store/api-key-kdf.js.map +0 -1
  636. package/dist/store/atomic.js +0 -167
  637. package/dist/store/atomic.js.map +0 -1
  638. package/dist/store/backup.js +0 -94
  639. package/dist/store/backup.js.map +0 -1
  640. package/dist/store/brain-accessor.js +0 -397
  641. package/dist/store/brain-accessor.js.map +0 -1
  642. package/dist/store/brain-schema.js +0 -215
  643. package/dist/store/brain-schema.js.map +0 -1
  644. package/dist/store/brain-sqlite.js +0 -222
  645. package/dist/store/brain-sqlite.js.map +0 -1
  646. package/dist/store/cache.js +0 -168
  647. package/dist/store/cache.js.map +0 -1
  648. package/dist/store/chain-schema.js +0 -51
  649. package/dist/store/chain-schema.js.map +0 -1
  650. package/dist/store/cleanup-legacy.js +0 -171
  651. package/dist/store/cleanup-legacy.js.map +0 -1
  652. package/dist/store/conduit-sqlite.js +0 -570
  653. package/dist/store/conduit-sqlite.js.map +0 -1
  654. package/dist/store/converters.js +0 -124
  655. package/dist/store/converters.js.map +0 -1
  656. package/dist/store/cross-db-cleanup.js +0 -319
  657. package/dist/store/cross-db-cleanup.js.map +0 -1
  658. package/dist/store/data-accessor.js +0 -26
  659. package/dist/store/data-accessor.js.map +0 -1
  660. package/dist/store/data-safety-central.js +0 -269
  661. package/dist/store/data-safety-central.js.map +0 -1
  662. package/dist/store/data-safety.js +0 -274
  663. package/dist/store/data-safety.js.map +0 -1
  664. package/dist/store/db-helpers.js +0 -224
  665. package/dist/store/db-helpers.js.map +0 -1
  666. package/dist/store/export.js +0 -155
  667. package/dist/store/export.js.map +0 -1
  668. package/dist/store/file-utils.js +0 -270
  669. package/dist/store/file-utils.js.map +0 -1
  670. package/dist/store/git-checkpoint.js +0 -365
  671. package/dist/store/git-checkpoint.js.map +0 -1
  672. package/dist/store/global-salt.js +0 -147
  673. package/dist/store/global-salt.js.map +0 -1
  674. package/dist/store/import-logging.js +0 -139
  675. package/dist/store/import-logging.js.map +0 -1
  676. package/dist/store/import-remap.js +0 -145
  677. package/dist/store/import-remap.js.map +0 -1
  678. package/dist/store/import-sort.js +0 -121
  679. package/dist/store/import-sort.js.map +0 -1
  680. package/dist/store/index.js +0 -29
  681. package/dist/store/index.js.map +0 -1
  682. package/dist/store/json.js +0 -208
  683. package/dist/store/json.js.map +0 -1
  684. package/dist/store/lifecycle-store.js +0 -249
  685. package/dist/store/lifecycle-store.js.map +0 -1
  686. package/dist/store/lock.js +0 -70
  687. package/dist/store/lock.js.map +0 -1
  688. package/dist/store/migrate-signaldock-to-conduit.js +0 -555
  689. package/dist/store/migrate-signaldock-to-conduit.js.map +0 -1
  690. package/dist/store/migration-manager.js +0 -151
  691. package/dist/store/migration-manager.js.map +0 -1
  692. package/dist/store/migration-sqlite.js +0 -676
  693. package/dist/store/migration-sqlite.js.map +0 -1
  694. package/dist/store/nexus-schema.js +0 -62
  695. package/dist/store/nexus-schema.js.map +0 -1
  696. package/dist/store/nexus-sqlite.js +0 -242
  697. package/dist/store/nexus-sqlite.js.map +0 -1
  698. package/dist/store/nexus-validation-schemas.js +0 -40
  699. package/dist/store/nexus-validation-schemas.js.map +0 -1
  700. package/dist/store/parsers.js +0 -37
  701. package/dist/store/parsers.js.map +0 -1
  702. package/dist/store/project-detect.js +0 -457
  703. package/dist/store/project-detect.js.map +0 -1
  704. package/dist/store/provider.js +0 -101
  705. package/dist/store/provider.js.map +0 -1
  706. package/dist/store/safety-data-accessor.js +0 -257
  707. package/dist/store/safety-data-accessor.js.map +0 -1
  708. package/dist/store/schema.js +0 -7
  709. package/dist/store/schema.js.map +0 -1
  710. package/dist/store/session-store.js +0 -219
  711. package/dist/store/session-store.js.map +0 -1
  712. package/dist/store/signaldock-sqlite.js +0 -550
  713. package/dist/store/signaldock-sqlite.js.map +0 -1
  714. package/dist/store/sqlite-backup.js +0 -359
  715. package/dist/store/sqlite-backup.js.map +0 -1
  716. package/dist/store/sqlite-data-accessor.js +0 -787
  717. package/dist/store/sqlite-data-accessor.js.map +0 -1
  718. package/dist/store/sqlite.js +0 -481
  719. package/dist/store/sqlite.js.map +0 -1
  720. package/dist/store/status-registry.js +0 -8
  721. package/dist/store/status-registry.js.map +0 -1
  722. package/dist/store/task-store.js +0 -358
  723. package/dist/store/task-store.js.map +0 -1
  724. package/dist/store/tasks-schema.js +0 -610
  725. package/dist/store/tasks-schema.js.map +0 -1
  726. package/dist/store/typed-query.js +0 -15
  727. package/dist/store/typed-query.js.map +0 -1
  728. package/dist/store/validation-schemas.js +0 -278
  729. package/dist/store/validation-schemas.js.map +0 -1
  730. package/dist/system/archive-analytics.js +0 -277
  731. package/dist/system/archive-analytics.js.map +0 -1
  732. package/dist/system/archive-stats.js +0 -64
  733. package/dist/system/archive-stats.js.map +0 -1
  734. package/dist/system/audit.js +0 -145
  735. package/dist/system/audit.js.map +0 -1
  736. package/dist/system/backup.js +0 -280
  737. package/dist/system/backup.js.map +0 -1
  738. package/dist/system/cleanup.js +0 -134
  739. package/dist/system/cleanup.js.map +0 -1
  740. package/dist/system/health.js +0 -1100
  741. package/dist/system/health.js.map +0 -1
  742. package/dist/system/index.js +0 -18
  743. package/dist/system/index.js.map +0 -1
  744. package/dist/system/inject-generate.js +0 -122
  745. package/dist/system/inject-generate.js.map +0 -1
  746. package/dist/system/labels.js +0 -38
  747. package/dist/system/labels.js.map +0 -1
  748. package/dist/system/metrics.js +0 -61
  749. package/dist/system/metrics.js.map +0 -1
  750. package/dist/system/migrate.js +0 -43
  751. package/dist/system/migrate.js.map +0 -1
  752. package/dist/system/platform-paths.js +0 -80
  753. package/dist/system/platform-paths.js.map +0 -1
  754. package/dist/system/runtime.js +0 -161
  755. package/dist/system/runtime.js.map +0 -1
  756. package/dist/system/safestop.js +0 -99
  757. package/dist/system/safestop.js.map +0 -1
  758. package/dist/system/storage-preflight.js +0 -123
  759. package/dist/system/storage-preflight.js.map +0 -1
  760. package/dist/task-work/index.js +0 -159
  761. package/dist/task-work/index.js.map +0 -1
  762. package/dist/tasks/add.js +0 -736
  763. package/dist/tasks/add.js.map +0 -1
  764. package/dist/tasks/analyze.js +0 -85
  765. package/dist/tasks/analyze.js.map +0 -1
  766. package/dist/tasks/archive.js +0 -90
  767. package/dist/tasks/archive.js.map +0 -1
  768. package/dist/tasks/atomicity.js +0 -83
  769. package/dist/tasks/atomicity.js.map +0 -1
  770. package/dist/tasks/cancel-ops.js +0 -83
  771. package/dist/tasks/cancel-ops.js.map +0 -1
  772. package/dist/tasks/complete.js +0 -214
  773. package/dist/tasks/complete.js.map +0 -1
  774. package/dist/tasks/crossref-extract.js +0 -73
  775. package/dist/tasks/crossref-extract.js.map +0 -1
  776. package/dist/tasks/delete-preview.js +0 -192
  777. package/dist/tasks/delete-preview.js.map +0 -1
  778. package/dist/tasks/delete.js +0 -120
  779. package/dist/tasks/delete.js.map +0 -1
  780. package/dist/tasks/deletion-strategy.js +0 -200
  781. package/dist/tasks/deletion-strategy.js.map +0 -1
  782. package/dist/tasks/dependency-check.js +0 -278
  783. package/dist/tasks/dependency-check.js.map +0 -1
  784. package/dist/tasks/deps-ready.js +0 -32
  785. package/dist/tasks/deps-ready.js.map +0 -1
  786. package/dist/tasks/enforcement.js +0 -86
  787. package/dist/tasks/enforcement.js.map +0 -1
  788. package/dist/tasks/epic-enforcement.js +0 -294
  789. package/dist/tasks/epic-enforcement.js.map +0 -1
  790. package/dist/tasks/find.js +0 -157
  791. package/dist/tasks/find.js.map +0 -1
  792. package/dist/tasks/graph-cache.js +0 -127
  793. package/dist/tasks/graph-cache.js.map +0 -1
  794. package/dist/tasks/graph-ops.js +0 -171
  795. package/dist/tasks/graph-ops.js.map +0 -1
  796. package/dist/tasks/graph-rag.js +0 -328
  797. package/dist/tasks/graph-rag.js.map +0 -1
  798. package/dist/tasks/hierarchy-policy.js +0 -149
  799. package/dist/tasks/hierarchy-policy.js.map +0 -1
  800. package/dist/tasks/hierarchy.js +0 -185
  801. package/dist/tasks/hierarchy.js.map +0 -1
  802. package/dist/tasks/id-generator.js +0 -65
  803. package/dist/tasks/id-generator.js.map +0 -1
  804. package/dist/tasks/index.js +0 -14
  805. package/dist/tasks/index.js.map +0 -1
  806. package/dist/tasks/labels.js +0 -55
  807. package/dist/tasks/labels.js.map +0 -1
  808. package/dist/tasks/list.js +0 -75
  809. package/dist/tasks/list.js.map +0 -1
  810. package/dist/tasks/phase-tracking.js +0 -133
  811. package/dist/tasks/phase-tracking.js.map +0 -1
  812. package/dist/tasks/pipeline-stage.js +0 -248
  813. package/dist/tasks/pipeline-stage.js.map +0 -1
  814. package/dist/tasks/plan.js +0 -268
  815. package/dist/tasks/plan.js.map +0 -1
  816. package/dist/tasks/relates.js +0 -101
  817. package/dist/tasks/relates.js.map +0 -1
  818. package/dist/tasks/show.js +0 -83
  819. package/dist/tasks/show.js.map +0 -1
  820. package/dist/tasks/size-weighting.js +0 -86
  821. package/dist/tasks/size-weighting.js.map +0 -1
  822. package/dist/tasks/staleness.js +0 -86
  823. package/dist/tasks/staleness.js.map +0 -1
  824. package/dist/tasks/task-ops.js +0 -1741
  825. package/dist/tasks/task-ops.js.map +0 -1
  826. package/dist/tasks/update.js +0 -303
  827. package/dist/tasks/update.js.map +0 -1
  828. package/dist/templates/index.js +0 -10
  829. package/dist/templates/index.js.map +0 -1
  830. package/dist/templates/parser.js +0 -254
  831. package/dist/templates/parser.js.map +0 -1
  832. package/dist/ui/aliases.js +0 -153
  833. package/dist/ui/aliases.js.map +0 -1
  834. package/dist/ui/changelog.js +0 -184
  835. package/dist/ui/changelog.js.map +0 -1
  836. package/dist/ui/command-registry.js +0 -168
  837. package/dist/ui/command-registry.js.map +0 -1
  838. package/dist/ui/flags.js +0 -94
  839. package/dist/ui/flags.js.map +0 -1
  840. package/dist/ui/index.js +0 -24
  841. package/dist/ui/index.js.map +0 -1
  842. package/dist/upgrade.js +0 -1148
  843. package/dist/upgrade.js.map +0 -1
  844. package/dist/validation/chain-validation.js +0 -146
  845. package/dist/validation/chain-validation.js.map +0 -1
  846. package/dist/validation/compliance.js +0 -155
  847. package/dist/validation/compliance.js.map +0 -1
  848. package/dist/validation/docs-sync.js +0 -212
  849. package/dist/validation/docs-sync.js.map +0 -1
  850. package/dist/validation/doctor/checks.js +0 -1069
  851. package/dist/validation/doctor/checks.js.map +0 -1
  852. package/dist/validation/doctor/index.js +0 -9
  853. package/dist/validation/doctor/index.js.map +0 -1
  854. package/dist/validation/doctor/project-cache.js +0 -160
  855. package/dist/validation/doctor/project-cache.js.map +0 -1
  856. package/dist/validation/doctor/utils.js +0 -155
  857. package/dist/validation/doctor/utils.js.map +0 -1
  858. package/dist/validation/engine.js +0 -914
  859. package/dist/validation/engine.js.map +0 -1
  860. package/dist/validation/gap-check.js +0 -175
  861. package/dist/validation/gap-check.js.map +0 -1
  862. package/dist/validation/index.js +0 -40
  863. package/dist/validation/index.js.map +0 -1
  864. package/dist/validation/manifest.js +0 -237
  865. package/dist/validation/manifest.js.map +0 -1
  866. package/dist/validation/operation-gate-validators.js +0 -724
  867. package/dist/validation/operation-gate-validators.js.map +0 -1
  868. package/dist/validation/operation-verification-gates.js +0 -532
  869. package/dist/validation/operation-verification-gates.js.map +0 -1
  870. package/dist/validation/param-utils.js +0 -141
  871. package/dist/validation/param-utils.js.map +0 -1
  872. package/dist/validation/protocol-common.js +0 -300
  873. package/dist/validation/protocol-common.js.map +0 -1
  874. package/dist/validation/protocols/_shared.js +0 -82
  875. package/dist/validation/protocols/_shared.js.map +0 -1
  876. package/dist/validation/protocols/architecture-decision.js +0 -31
  877. package/dist/validation/protocols/architecture-decision.js.map +0 -1
  878. package/dist/validation/protocols/artifact-publish.js +0 -28
  879. package/dist/validation/protocols/artifact-publish.js.map +0 -1
  880. package/dist/validation/protocols/consensus.js +0 -41
  881. package/dist/validation/protocols/consensus.js.map +0 -1
  882. package/dist/validation/protocols/contribution.js +0 -27
  883. package/dist/validation/protocols/contribution.js.map +0 -1
  884. package/dist/validation/protocols/decomposition.js +0 -28
  885. package/dist/validation/protocols/decomposition.js.map +0 -1
  886. package/dist/validation/protocols/implementation.js +0 -24
  887. package/dist/validation/protocols/implementation.js.map +0 -1
  888. package/dist/validation/protocols/provenance.js +0 -29
  889. package/dist/validation/protocols/provenance.js.map +0 -1
  890. package/dist/validation/protocols/release.js +0 -29
  891. package/dist/validation/protocols/release.js.map +0 -1
  892. package/dist/validation/protocols/research.js +0 -24
  893. package/dist/validation/protocols/research.js.map +0 -1
  894. package/dist/validation/protocols/specification.js +0 -27
  895. package/dist/validation/protocols/specification.js.map +0 -1
  896. package/dist/validation/protocols/testing.js +0 -30
  897. package/dist/validation/protocols/testing.js.map +0 -1
  898. package/dist/validation/protocols/validation.js +0 -30
  899. package/dist/validation/protocols/validation.js.map +0 -1
  900. package/dist/validation/schema-integrity.js +0 -170
  901. package/dist/validation/schema-integrity.js.map +0 -1
  902. package/dist/validation/schema-validator.js +0 -176
  903. package/dist/validation/schema-validator.js.map +0 -1
  904. package/dist/validation/validate-ops.js +0 -937
  905. package/dist/validation/validate-ops.js.map +0 -1
  906. package/dist/validation/validation-rules.js +0 -226
  907. package/dist/validation/validation-rules.js.map +0 -1
  908. package/dist/validation/verification.js +0 -321
  909. package/dist/validation/verification.js.map +0 -1
@@ -1,151 +0,0 @@
1
- /**
2
- * Unified migration manager for SQLite databases.
3
- *
4
- * Consolidates duplicated reconciliation, bootstrap, retry, and column-safety
5
- * logic that was previously copy-pasted between sqlite.ts (tasks.db) and
6
- * brain-sqlite.ts (brain.db). Both modules now delegate to these shared functions.
7
- *
8
- * @task T132
9
- * @see https://github.com/anthropics/cleo/issues/82
10
- * @see https://github.com/anthropics/cleo/issues/63
11
- * @see https://github.com/anthropics/cleo/issues/65
12
- */
13
- import { copyFileSync, existsSync } from 'node:fs';
14
- import { readMigrationFiles } from 'drizzle-orm/migrator';
15
- import { migrate } from 'drizzle-orm/node-sqlite/migrator';
16
- import { getLogger } from '../logger.js';
17
- /** Migration retry constants for SQLITE_BUSY handling (T5185). */
18
- const MAX_MIGRATION_RETRIES = 5;
19
- const MIGRATION_RETRY_BASE_DELAY_MS = 100;
20
- const MIGRATION_RETRY_MAX_DELAY_MS = 2000;
21
- /**
22
- * Check whether a table exists in a SQLite database.
23
- */
24
- export function tableExists(nativeDb, tableName) {
25
- const result = nativeDb
26
- .prepare("SELECT name FROM sqlite_master WHERE type='table' AND name=?")
27
- .get(tableName);
28
- return !!result;
29
- }
30
- /**
31
- * Check if an error is a SQLite BUSY error (database locked by another process).
32
- * node:sqlite throws native Error with message containing the SQLite error code.
33
- * @task T5185
34
- */
35
- export function isSqliteBusy(err) {
36
- if (!(err instanceof Error))
37
- return false;
38
- const msg = err.message.toLowerCase();
39
- return msg.includes('sqlite_busy') || msg.includes('database is locked');
40
- }
41
- /**
42
- * Create a pre-migration safety backup of the database file.
43
- *
44
- * Only creates the backup once (idempotent). Non-fatal on failure.
45
- */
46
- export function createSafetyBackup(dbPath) {
47
- const backupPath = dbPath.replace(/\.db$/, '-pre-cleo.db.bak');
48
- if (!existsSync(backupPath)) {
49
- try {
50
- copyFileSync(dbPath, backupPath);
51
- }
52
- catch {
53
- /* non-fatal */
54
- }
55
- }
56
- }
57
- /**
58
- * Bootstrap and reconcile the Drizzle migration journal.
59
- *
60
- * Handles three scenarios:
61
- * 1. Tables exist but no __drizzle_migrations — bootstrap baseline as applied
62
- * 2. Journal has orphaned hashes (from older CLEO version) — clear and re-mark all as applied
63
- * 3. Journal is healthy — no-op
64
- *
65
- * @param nativeDb - Native SQLite database handle
66
- * @param migrationsFolder - Path to the drizzle migrations folder
67
- * @param existenceTable - A table name used to detect if the DB has data (e.g., 'tasks' or 'brain_decisions')
68
- * @param logSubsystem - Logger subsystem name for reconciliation warnings
69
- */
70
- export function reconcileJournal(nativeDb, migrationsFolder, existenceTable, logSubsystem) {
71
- // Scenario 1: Tables exist but no migration journal — bootstrap baseline
72
- if (tableExists(nativeDb, existenceTable) && !tableExists(nativeDb, '__drizzle_migrations')) {
73
- const migrations = readMigrationFiles({ migrationsFolder });
74
- const baseline = migrations[0];
75
- if (baseline) {
76
- nativeDb.exec(`
77
- CREATE TABLE IF NOT EXISTS "__drizzle_migrations" (
78
- id SERIAL PRIMARY KEY,
79
- hash text NOT NULL,
80
- created_at numeric
81
- )
82
- `);
83
- nativeDb.exec(`INSERT INTO "__drizzle_migrations" ("hash", "created_at") VALUES ('${baseline.hash}', ${baseline.folderMillis})`);
84
- }
85
- }
86
- // Scenario 2: Journal has orphaned entries from a previous CLEO version
87
- if (tableExists(nativeDb, '__drizzle_migrations') && tableExists(nativeDb, existenceTable)) {
88
- const localMigrations = readMigrationFiles({ migrationsFolder });
89
- const localHashes = new Set(localMigrations.map((m) => m.hash));
90
- const dbEntries = nativeDb.prepare('SELECT hash FROM "__drizzle_migrations"').all();
91
- const hasOrphanedEntries = dbEntries.some((e) => !localHashes.has(e.hash));
92
- if (hasOrphanedEntries) {
93
- const log = getLogger(logSubsystem);
94
- log.warn({ orphaned: dbEntries.filter((e) => !localHashes.has(e.hash)).length }, `Detected stale migration journal entries from a previous CLEO version. Reconciling.`);
95
- nativeDb.exec('DELETE FROM "__drizzle_migrations"');
96
- for (const m of localMigrations) {
97
- nativeDb.exec(`INSERT INTO "__drizzle_migrations" ("hash", "created_at") VALUES ('${m.hash}', ${m.folderMillis})`);
98
- }
99
- }
100
- }
101
- }
102
- /**
103
- * Run Drizzle migrations with SQLITE_BUSY retry and exponential backoff.
104
- *
105
- * @param db - Drizzle database instance
106
- * @param migrationsFolder - Path to the drizzle migrations folder
107
- */
108
- // biome-ignore lint/suspicious/noExplicitAny: Drizzle's NodeSQLiteDatabase is generic — accepting any schema avoids coupling to a specific schema type
109
- export function migrateWithRetry(db, migrationsFolder) {
110
- for (let attempt = 1; attempt <= MAX_MIGRATION_RETRIES; attempt++) {
111
- try {
112
- migrate(db, { migrationsFolder });
113
- return;
114
- }
115
- catch (err) {
116
- if (!isSqliteBusy(err) || attempt === MAX_MIGRATION_RETRIES) {
117
- throw err;
118
- }
119
- const delay = Math.min(MIGRATION_RETRY_BASE_DELAY_MS * 2 ** (attempt - 1) * (1 + Math.random() * 0.5), MIGRATION_RETRY_MAX_DELAY_MS);
120
- Atomics.wait(new Int32Array(new SharedArrayBuffer(4)), 0, 0, Math.round(delay));
121
- }
122
- }
123
- }
124
- /**
125
- * Ensure all required columns exist on a table.
126
- *
127
- * Uses PRAGMA table_info to inspect the schema and adds any missing columns
128
- * via ALTER TABLE ADD COLUMN. Safety net for databases where Drizzle migrations
129
- * could not run due to journal corruption or version skew.
130
- *
131
- * @param nativeDb - Native SQLite database handle
132
- * @param tableName - Table to check (e.g., 'tasks')
133
- * @param requiredColumns - Columns that must exist
134
- * @param logSubsystem - Logger subsystem name
135
- */
136
- export function ensureColumns(nativeDb, tableName, requiredColumns, logSubsystem) {
137
- if (!tableExists(nativeDb, tableName))
138
- return;
139
- if (requiredColumns.length === 0)
140
- return;
141
- const columns = nativeDb.prepare(`PRAGMA table_info(${tableName})`).all();
142
- const existingCols = new Set(columns.map((c) => c.name));
143
- for (const req of requiredColumns) {
144
- if (!existingCols.has(req.name)) {
145
- const log = getLogger(logSubsystem);
146
- log.warn({ column: req.name }, `Adding missing column ${tableName}.${req.name} via ALTER TABLE`);
147
- nativeDb.exec(`ALTER TABLE ${tableName} ADD COLUMN ${req.name} ${req.ddl}`);
148
- }
149
- }
150
- }
151
- //# sourceMappingURL=migration-manager.js.map
@@ -1 +0,0 @@
1
- {"version":3,"file":"migration-manager.js","sourceRoot":"","sources":["../../src/store/migration-manager.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;GAWG;AAEH,OAAO,EAAE,YAAY,EAAE,UAAU,EAAE,MAAM,SAAS,CAAC;AAEnD,OAAO,EAAE,kBAAkB,EAAE,MAAM,sBAAsB,CAAC;AAE1D,OAAO,EAAE,OAAO,EAAE,MAAM,kCAAkC,CAAC;AAC3D,OAAO,EAAE,SAAS,EAAE,MAAM,cAAc,CAAC;AASzC,kEAAkE;AAClE,MAAM,qBAAqB,GAAG,CAAC,CAAC;AAChC,MAAM,6BAA6B,GAAG,GAAG,CAAC;AAC1C,MAAM,4BAA4B,GAAG,IAAI,CAAC;AAE1C;;GAEG;AACH,MAAM,UAAU,WAAW,CAAC,QAAsB,EAAE,SAAiB;IACnE,MAAM,MAAM,GAAG,QAAQ;SACpB,OAAO,CAAC,8DAA8D,CAAC;SACvE,GAAG,CAAC,SAAS,CAAwC,CAAC;IACzD,OAAO,CAAC,CAAC,MAAM,CAAC;AAClB,CAAC;AAED;;;;GAIG;AACH,MAAM,UAAU,YAAY,CAAC,GAAY;IACvC,IAAI,CAAC,CAAC,GAAG,YAAY,KAAK,CAAC;QAAE,OAAO,KAAK,CAAC;IAC1C,MAAM,GAAG,GAAG,GAAG,CAAC,OAAO,CAAC,WAAW,EAAE,CAAC;IACtC,OAAO,GAAG,CAAC,QAAQ,CAAC,aAAa,CAAC,IAAI,GAAG,CAAC,QAAQ,CAAC,oBAAoB,CAAC,CAAC;AAC3E,CAAC;AAED;;;;GAIG;AACH,MAAM,UAAU,kBAAkB,CAAC,MAAc;IAC/C,MAAM,UAAU,GAAG,MAAM,CAAC,OAAO,CAAC,OAAO,EAAE,kBAAkB,CAAC,CAAC;IAC/D,IAAI,CAAC,UAAU,CAAC,UAAU,CAAC,EAAE,CAAC;QAC5B,IAAI,CAAC;YACH,YAAY,CAAC,MAAM,EAAE,UAAU,CAAC,CAAC;QACnC,CAAC;QAAC,MAAM,CAAC;YACP,eAAe;QACjB,CAAC;IACH,CAAC;AACH,CAAC;AAED;;;;;;;;;;;;GAYG;AACH,MAAM,UAAU,gBAAgB,CAC9B,QAAsB,EACtB,gBAAwB,EACxB,cAAsB,EACtB,YAAoB;IAEpB,yEAAyE;IACzE,IAAI,WAAW,CAAC,QAAQ,EAAE,cAAc,CAAC,IAAI,CAAC,WAAW,CAAC,QAAQ,EAAE,sBAAsB,CAAC,EAAE,CAAC;QAC5F,MAAM,UAAU,GAAG,kBAAkB,CAAC,EAAE,gBAAgB,EAAE,CAAC,CAAC;QAC5D,MAAM,QAAQ,GAAG,UAAU,CAAC,CAAC,CAAC,CAAC;QAC/B,IAAI,QAAQ,EAAE,CAAC;YACb,QAAQ,CAAC,IAAI,CAAC;;;;;;OAMb,CAAC,CAAC;YACH,QAAQ,CAAC,IAAI,CACX,sEAAsE,QAAQ,CAAC,IAAI,MAAM,QAAQ,CAAC,YAAY,GAAG,CAClH,CAAC;QACJ,CAAC;IACH,CAAC;IAED,wEAAwE;IACxE,IAAI,WAAW,CAAC,QAAQ,EAAE,sBAAsB,CAAC,IAAI,WAAW,CAAC,QAAQ,EAAE,cAAc,CAAC,EAAE,CAAC;QAC3F,MAAM,eAAe,GAAG,kBAAkB,CAAC,EAAE,gBAAgB,EAAE,CAAC,CAAC;QACjE,MAAM,WAAW,GAAG,IAAI,GAAG,CAAC,eAAe,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC;QAChE,MAAM,SAAS,GAAG,QAAQ,CAAC,OAAO,CAAC,yCAAyC,CAAC,CAAC,GAAG,EAE/E,CAAC;QACH,MAAM,kBAAkB,GAAG,SAAS,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,WAAW,CAAC,GAAG,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC;QAE3E,IAAI,kBAAkB,EAAE,CAAC;YACvB,MAAM,GAAG,GAAG,SAAS,CAAC,YAAY,CAAC,CAAC;YACpC,GAAG,CAAC,IAAI,CACN,EAAE,QAAQ,EAAE,SAAS,CAAC,MAAM,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,WAAW,CAAC,GAAG,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,MAAM,EAAE,EACtE,qFAAqF,CACtF,CAAC;YACF,QAAQ,CAAC,IAAI,CAAC,oCAAoC,CAAC,CAAC;YACpD,KAAK,MAAM,CAAC,IAAI,eAAe,EAAE,CAAC;gBAChC,QAAQ,CAAC,IAAI,CACX,sEAAsE,CAAC,CAAC,IAAI,MAAM,CAAC,CAAC,YAAY,GAAG,CACpG,CAAC;YACJ,CAAC;QACH,CAAC;IACH,CAAC;AACH,CAAC;AAED;;;;;GAKG;AACH,uJAAuJ;AACvJ,MAAM,UAAU,gBAAgB,CAAC,EAA2B,EAAE,gBAAwB;IACpF,KAAK,IAAI,OAAO,GAAG,CAAC,EAAE,OAAO,IAAI,qBAAqB,EAAE,OAAO,EAAE,EAAE,CAAC;QAClE,IAAI,CAAC;YACH,OAAO,CAAC,EAAE,EAAE,EAAE,gBAAgB,EAAE,CAAC,CAAC;YAClC,OAAO;QACT,CAAC;QAAC,OAAO,GAAG,EAAE,CAAC;YACb,IAAI,CAAC,YAAY,CAAC,GAAG,CAAC,IAAI,OAAO,KAAK,qBAAqB,EAAE,CAAC;gBAC5D,MAAM,GAAG,CAAC;YACZ,CAAC;YACD,MAAM,KAAK,GAAG,IAAI,CAAC,GAAG,CACpB,6BAA6B,GAAG,CAAC,IAAI,CAAC,OAAO,GAAG,CAAC,CAAC,GAAG,CAAC,CAAC,GAAG,IAAI,CAAC,MAAM,EAAE,GAAG,GAAG,CAAC,EAC9E,4BAA4B,CAC7B,CAAC;YACF,OAAO,CAAC,IAAI,CAAC,IAAI,UAAU,CAAC,IAAI,iBAAiB,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,IAAI,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC,CAAC;QAClF,CAAC;IACH,CAAC;AACH,CAAC;AAED;;;;;;;;;;;GAWG;AACH,MAAM,UAAU,aAAa,CAC3B,QAAsB,EACtB,SAAiB,EACjB,eAAiC,EACjC,YAAoB;IAEpB,IAAI,CAAC,WAAW,CAAC,QAAQ,EAAE,SAAS,CAAC;QAAE,OAAO;IAC9C,IAAI,eAAe,CAAC,MAAM,KAAK,CAAC;QAAE,OAAO;IAEzC,MAAM,OAAO,GAAG,QAAQ,CAAC,OAAO,CAAC,qBAAqB,SAAS,GAAG,CAAC,CAAC,GAAG,EAErE,CAAC;IACH,MAAM,YAAY,GAAG,IAAI,GAAG,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC;IAEzD,KAAK,MAAM,GAAG,IAAI,eAAe,EAAE,CAAC;QAClC,IAAI,CAAC,YAAY,CAAC,GAAG,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,CAAC;YAChC,MAAM,GAAG,GAAG,SAAS,CAAC,YAAY,CAAC,CAAC;YACpC,GAAG,CAAC,IAAI,CACN,EAAE,MAAM,EAAE,GAAG,CAAC,IAAI,EAAE,EACpB,yBAAyB,SAAS,IAAI,GAAG,CAAC,IAAI,kBAAkB,CACjE,CAAC;YACF,QAAQ,CAAC,IAAI,CAAC,eAAe,SAAS,eAAe,GAAG,CAAC,IAAI,IAAI,GAAG,CAAC,GAAG,EAAE,CAAC,CAAC;QAC9E,CAAC;IACH,CAAC;AACH,CAAC"}