@cleocode/core 2026.4.13 → 2026.4.14

package/dist/skills/manifests/contribution.js

@@ -1,175 +0,0 @@
-/**
- * Multi-agent contribution protocol.
- * Ports lib/skills/contribution-protocol.sh.
- *
- * Implements the contribution protocol for multi-agent research coordination:
- * template instantiation, task validation, injection block generation,
- * conflict detection, and consensus computation.
- *
- * @epic T4454
- * @task T4520
- */
-import { randomBytes } from 'node:crypto';
-import { existsSync, readFileSync } from 'node:fs';
-import { getAccessor } from '../../store/data-accessor.js';
-// ============================================================================
-// Contribution Protocol
-// ============================================================================
-/**
- * Generate a unique contribution ID.
- * @task T4520
- */
-export function generateContributionId(taskId) {
-    const hash = randomBytes(4).toString('hex');
-    const date = new Date().toISOString().split('T')[0];
-    return `contrib-${taskId}-${date}-${hash}`;
-}
-/**
- * Validate that a task is suitable for contribution protocol.
- * @task T4520
- */
-export async function validateContributionTask(taskId, cwd) {
-    const issues = [];
-    const acc = await getAccessor(cwd);
-    const task = await acc.loadSingleTask(taskId);
-    if (!task) {
-        return { valid: false, issues: [`Task ${taskId} not found`] };
-    }
-    // Must be pending or active
-    if (task.status !== 'pending' && task.status !== 'active') {
-        issues.push(`Task status is ${task.status}, expected pending or active`);
-    }
-    // Should have a description
-    if (!task.description) {
-        issues.push('Task missing description');
-    }
-    return { valid: issues.length === 0, issues };
-}
-/**
- * Generate the contribution injection block for a subagent prompt.
- * @task T4520
- */
-export function getContributionInjection(taskId, protocolPath, _cwd) {
-    const lines = [
-        '---',
-        '## CONTRIBUTION PROTOCOL',
-        '',
-        `**Task**: ${taskId}`,
-        `**Protocol**: contribution`,
-        `**Generated**: ${new Date().toISOString()}`,
-        '',
-        '### Requirements',
-        '- Tag all new functions with @task and @contribution markers',
-        '- Provide rationale for all decisions',
-        '- Report confidence levels (0.0-1.0)',
-        '- Document any conflicts with prior agent outputs',
-        '',
-    ];
-    if (protocolPath && existsSync(protocolPath)) {
-        lines.push('### Protocol Details');
-        lines.push('');
-        lines.push(readFileSync(protocolPath, 'utf-8'));
-    }
-    lines.push('---');
-    return lines.join('\n');
-}
-/**
- * Detect conflicts between two sets of decisions.
- * @task T4520
- */
-export function detectConflicts(decisions1, decisions2) {
-    const conflicts = [];
-    for (const d1 of decisions1) {
-        for (const d2 of decisions2) {
-            if (d1.taskId === d2.taskId && d1.decision !== d2.decision) {
-                const confDiff = Math.abs(d1.confidence - d2.confidence);
-                const severity = confDiff > 0.5 ? 'high' : confDiff > 0.2 ? 'medium' : 'low';
-                conflicts.push({
-                    field: 'decision',
-                    agent1: d1.agentId,
-                    agent2: d2.agentId,
-                    value1: d1.decision,
-                    value2: d2.decision,
-                    severity,
-                });
-            }
-        }
-    }
-    return conflicts;
-}
-/**
- * Compute weighted consensus from multiple agent decisions.
- * @task T4520
- */
-export function computeConsensus(decisions, weights) {
-    if (decisions.length === 0) {
-        return { decision: '', confidence: 0, votes: [], conflicts: [] };
-    }
-    // Build vote map: decision -> weighted score
-    const voteMap = new Map();
-    const votes = [];
-    for (const d of decisions) {
-        const weight = weights?.[d.agentId] ?? d.confidence;
-        const current = voteMap.get(d.decision) ?? 0;
-        voteMap.set(d.decision, current + weight);
-        votes.push({ agentId: d.agentId, weight, vote: d.decision });
-    }
-    // Find highest scoring decision
-    let bestDecision = '';
-    let bestScore = -1;
-    let totalWeight = 0;
-    for (const [decision, score] of voteMap) {
-        totalWeight += score;
-        if (score > bestScore) {
-            bestScore = score;
-            bestDecision = decision;
-        }
-    }
-    // Detect conflicts among decisions
-    const conflicts = [];
-    const uniqueDecisions = [...new Set(decisions.map((d) => d.decision))];
-    if (uniqueDecisions.length > 1) {
-        // Pairwise conflict detection
-        for (let i = 0; i < decisions.length; i++) {
-            for (let j = i + 1; j < decisions.length; j++) {
-                if (decisions[i].decision !== decisions[j].decision) {
-                    const confDiff = Math.abs(decisions[i].confidence - decisions[j].confidence);
-                    conflicts.push({
-                        field: 'decision',
-                        agent1: decisions[i].agentId,
-                        agent2: decisions[j].agentId,
-                        value1: decisions[i].decision,
-                        value2: decisions[j].decision,
-                        severity: confDiff > 0.5 ? 'high' : confDiff > 0.2 ? 'medium' : 'low',
-                    });
-                }
-            }
-        }
-    }
-    return {
-        decision: bestDecision,
-        confidence: totalWeight > 0 ? bestScore / totalWeight : 0,
-        votes,
-        conflicts,
-    };
-}
-/**
- * Create a manifest entry for a contribution.
- * @task T4520
- */
-export function createContributionManifestEntry(taskId, contributionId, decisions) {
-    return {
-        id: contributionId,
-        file: `${contributionId}.md`,
-        title: `Contribution for ${taskId}`,
-        date: new Date().toISOString().split('T')[0],
-        status: 'completed',
-        agent_type: 'contribution',
-        topics: ['contribution', 'multi-agent'],
-        key_findings: decisions.map((d) => `${d.agentId}: ${d.decision} (conf: ${d.confidence})`),
-        actionable: true,
-        needs_followup: [],
-        linked_tasks: [taskId],
-    };
-}
-//# sourceMappingURL=contribution.js.map

package/dist/skills/manifests/contribution.js.map

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package/dist/skills/manifests/research.js

@@ -1,281 +0,0 @@
-/**
- * Research manifest CRUD operations.
- * Ports lib/skills/research-manifest.sh.
- *
- * Manages MANIFEST.jsonl (append-only JSONL format) for agent outputs.
- * Supports read, append, find, filter, archive, and rotation.
- *
- * @epic T4454
- * @task T4520
- */
-import { appendFileSync, existsSync, mkdirSync, readFileSync, writeFileSync } from 'node:fs';
-import { join } from 'node:path';
-import { ExitCode, MANIFEST_STATUSES } from '@cleocode/contracts';
-import { CleoError } from '../../errors.js';
-import { getAgentOutputsAbsolute, getAgentOutputsDir, getManifestPath } from '../../paths.js';
-// ============================================================================
-// Initialization
-// ============================================================================
-/**
- * Ensure agent outputs directory and manifest file exist.
- * @task T4520
- */
-export function ensureOutputs(cwd) {
-    const outputDir = getAgentOutputsDir(cwd);
-    const absOutputDir = getAgentOutputsAbsolute(cwd);
-    const manifestPath = getManifestPath(cwd);
-    const archiveDir = join(absOutputDir, 'archive');
-    const created = [];
-    if (!existsSync(absOutputDir)) {
-        mkdirSync(absOutputDir, { recursive: true });
-        created.push(outputDir);
-    }
-    if (!existsSync(archiveDir)) {
-        mkdirSync(archiveDir, { recursive: true });
-        created.push('archive/');
-    }
-    if (!existsSync(manifestPath)) {
-        writeFileSync(manifestPath, '', 'utf-8');
-        created.push('MANIFEST.jsonl');
-    }
-    return { created };
-}
-// ============================================================================
-// CRUD Operations
-// ============================================================================
-/**
- * Read all manifest entries.
- * @task T4520
- */
-export function readManifest(cwd) {
-    const manifestPath = getManifestPath(cwd);
-    if (!existsSync(manifestPath))
-        return [];
-    const content = readFileSync(manifestPath, 'utf-8');
-    const entries = [];
-    for (const line of content.split('\n')) {
-        const trimmed = line.trim();
-        if (!trimmed)
-            continue;
-        try {
-            entries.push(JSON.parse(trimmed));
-        }
-        catch {
-            // Skip invalid lines
-        }
-    }
-    return entries;
-}
-/**
- * Append a manifest entry (atomic JSONL append).
- * @task T4520
- */
-export function appendManifest(entry, cwd) {
-    ensureOutputs(cwd);
-    const manifestPath = getManifestPath(cwd);
-    // Validate entry
-    validateEntry(entry);
-    // Check for duplicate ID
-    const existing = readManifest(cwd);
-    if (existing.some((e) => e.id === entry.id)) {
-        throw new CleoError(ExitCode.ID_COLLISION, `Manifest entry with id="${entry.id}" already exists`);
-    }
-    // Atomic append (single line, no pretty-print)
-    const line = JSON.stringify(entry) + '\n';
-    appendFileSync(manifestPath, line, 'utf-8');
-}
-/**
- * Find a manifest entry by ID.
- * @task T4520
- */
-export function findEntry(id, cwd) {
-    const entries = readManifest(cwd);
-    return entries.find((e) => e.id === id) ?? null;
-}
-/**
- * Filter manifest entries by criteria.
- * @task T4520
- */
-export function filterEntries(criteria, cwd) {
-    let entries = readManifest(cwd);
-    if (criteria.status) {
-        const s = criteria.status;
-        entries = entries.filter((e) => e.status === s);
-    }
-    if (criteria.agentType) {
-        const at = criteria.agentType;
-        entries = entries.filter((e) => e.agent_type === at);
-    }
-    if (criteria.topic) {
-        const t = criteria.topic;
-        entries = entries.filter((e) => e.topics.includes(t));
-    }
-    if (criteria.linkedTask) {
-        const lt = criteria.linkedTask;
-        entries = entries.filter((e) => e.linked_tasks?.includes(lt));
-    }
-    if (criteria.actionable !== undefined) {
-        entries = entries.filter((e) => e.actionable === criteria.actionable);
-    }
-    return entries;
-}
-/**
- * Get entries with pending follow-ups.
- * @task T4520
- */
-export function getPendingFollowup(cwd) {
-    const entries = readManifest(cwd);
-    return entries.filter((e) => Array.isArray(e.needs_followup) && e.needs_followup.length > 0);
-}
-/**
- * Get unique follow-up task IDs from all manifest entries.
- * @task T4520
- */
-export function getFollowupTaskIds(cwd) {
-    const entries = getPendingFollowup(cwd);
-    const ids = new Set();
-    for (const entry of entries) {
-        for (const id of entry.needs_followup) {
-            if (!id.startsWith('BLOCKED:')) {
-                ids.add(id);
-            }
-        }
-    }
-    return [...ids];
-}
-/**
- * Check if a task has linked research.
- * @task T4520
- */
-export function taskHasResearch(taskId, cwd) {
-    const entries = readManifest(cwd);
-    const linked = entries.filter((e) => e.linked_tasks?.includes(taskId));
-    return { hasResearch: linked.length > 0, count: linked.length };
-}
-/**
- * Archive a manifest entry (move to archive status).
- * @task T4520
- */
-export function archiveEntry(entryId, cwd) {
-    const manifestPath = getManifestPath(cwd);
-    if (!existsSync(manifestPath))
-        return false;
-    const content = readFileSync(manifestPath, 'utf-8');
-    const lines = content.split('\n');
-    let found = false;
-    const newLines = [];
-    for (const line of lines) {
-        const trimmed = line.trim();
-        if (!trimmed) {
-            newLines.push(line);
-            continue;
-        }
-        try {
-            const entry = JSON.parse(trimmed);
-            if (entry.id === entryId) {
-                entry.status = 'archived';
-                newLines.push(JSON.stringify(entry));
-                found = true;
-            }
-            else {
-                newLines.push(line);
-            }
-        }
-        catch {
-            newLines.push(line);
-        }
-    }
-    if (found) {
-        writeFileSync(manifestPath, newLines.join('\n'), 'utf-8');
-    }
-    return found;
-}
-/**
- * Rotate manifest by archiving old entries.
- * @task T4520
- */
-export function rotateManifest(maxEntries = 100, cwd) {
-    const entries = readManifest(cwd);
-    if (entries.length <= maxEntries)
-        return 0;
-    const manifestPath = getManifestPath(cwd);
-    const absOutputDir = getAgentOutputsAbsolute(cwd);
-    const archiveDir = join(absOutputDir, 'archive');
-    // Archive older entries
-    const toKeep = entries.slice(-maxEntries);
-    const toArchive = entries.slice(0, entries.length - maxEntries);
-    if (!existsSync(archiveDir)) {
-        mkdirSync(archiveDir, { recursive: true });
-    }
-    // Write archive file
-    const archivePath = join(archiveDir, `MANIFEST-${new Date().toISOString().split('T')[0]}.jsonl`);
-    const archiveContent = toArchive.map((e) => JSON.stringify(e)).join('\n') + '\n';
-    appendFileSync(archivePath, archiveContent, 'utf-8');
-    // Rewrite main manifest with kept entries
-    const keepContent = toKeep.map((e) => JSON.stringify(e)).join('\n') + '\n';
-    writeFileSync(manifestPath, keepContent, 'utf-8');
-    return toArchive.length;
-}
-// ============================================================================
-// Validation
-// ============================================================================
-const MANIFEST_STATUS_SET = new Set(MANIFEST_STATUSES);
-const VALID_AGENT_TYPES = new Set([
-    'research',
-    'consensus',
-    'specification',
-    'decomposition',
-    'implementation',
-    'contribution',
-    'release',
-    'validation',
-    'documentation',
-    'analysis',
-    'testing',
-    'cleanup',
-    'design',
-    'architecture',
-    'report',
-    'synthesis',
-    'orchestrator',
-    'handoff',
-    'verification',
-    'review',
-]);
-/**
- * Validate a manifest entry before appending.
- * @task T4520
- */
-function validateEntry(entry) {
-    if (!entry.id) {
-        throw new CleoError(ExitCode.VALIDATION_ERROR, 'Manifest entry missing "id" field');
-    }
-    if (!entry.file) {
-        throw new CleoError(ExitCode.VALIDATION_ERROR, 'Manifest entry missing "file" field');
-    }
-    if (!entry.title) {
-        throw new CleoError(ExitCode.VALIDATION_ERROR, 'Manifest entry missing "title" field');
-    }
-    if (!entry.date || !/^\d{4}-\d{2}-\d{2}$/.test(entry.date)) {
-        throw new CleoError(ExitCode.VALIDATION_ERROR, `Invalid date format: ${entry.date}`);
-    }
-    if (!MANIFEST_STATUS_SET.has(entry.status)) {
-        throw new CleoError(ExitCode.VALIDATION_ERROR, `Invalid status: ${entry.status}`);
-    }
-    if (!Array.isArray(entry.topics)) {
-        throw new CleoError(ExitCode.VALIDATION_ERROR, 'topics must be an array');
-    }
-    if (!Array.isArray(entry.key_findings)) {
-        throw new CleoError(ExitCode.VALIDATION_ERROR, 'key_findings must be an array');
-    }
-    if (typeof entry.actionable !== 'boolean') {
-        throw new CleoError(ExitCode.VALIDATION_ERROR, 'actionable must be a boolean');
-    }
-    // Validate agent_type if present
-    if (entry.agent_type &&
-        !VALID_AGENT_TYPES.has(entry.agent_type) &&
-        !entry.agent_type.startsWith('ct-')) {
-        throw new CleoError(ExitCode.VALIDATION_ERROR, `Invalid agent_type: ${entry.agent_type}`);
-    }
-}
-//# sourceMappingURL=research.js.map

package/dist/skills/manifests/research.js.map

@@ -1 +0,0 @@
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package/dist/skills/manifests/resolver.js

@@ -1,146 +0,0 @@
-/**
- * Cached manifest generation and resolution.
- * Ports lib/skills/manifest-resolver.sh.
- *
- * Generates and caches a unified skills manifest by scanning all search paths.
- * Uses TTL-based cache with graceful degradation.
- *
- * @epic T4454
- * @task T4520
- */
-import { existsSync, mkdirSync, readFileSync, writeFileSync } from 'node:fs';
-import { join } from 'node:path';
-import { getCleoHome } from '../../paths.js';
-import { generateManifest } from '../discovery.js';
-// ============================================================================
-// Cache Configuration
-// ============================================================================
-const DEFAULT_CACHE_TTL = 300; // 5 minutes in seconds
-/**
- * Get the manifest cache directory.
- */
-function getCacheDir() {
-    return process.env['CLEO_MANIFEST_CACHE_DIR'] ?? join(getCleoHome(), 'cache');
-}
-/**
- * Get the cached manifest file path.
- */
-function getCachedManifestPath() {
-    return join(getCacheDir(), 'skills-manifest.json');
-}
-// ============================================================================
-// Cache Management
-// ============================================================================
-/**
- * Check if the cached manifest is fresh (within TTL).
- * @task T4520
- */
-export function isCacheFresh(cachePath) {
-    const path = cachePath ?? getCachedManifestPath();
-    if (!existsSync(path))
-        return false;
-    try {
-        const content = readFileSync(path, 'utf-8');
-        const manifest = JSON.parse(content);
-        const ttl = manifest._meta?.ttlSeconds ?? DEFAULT_CACHE_TTL;
-        const generatedAt = new Date(manifest._meta?.generatedAt ?? 0).getTime();
-        const ageSeconds = (Date.now() - generatedAt) / 1000;
-        return ageSeconds < ttl;
-    }
-    catch {
-        return false;
-    }
-}
-/**
- * Invalidate the cache (delete the cached manifest).
- * @task T4520
- */
-export function invalidateCache() {
-    const cachePath = getCachedManifestPath();
-    if (existsSync(cachePath)) {
-        try {
-            writeFileSync(cachePath, '', 'utf-8');
-        }
-        catch {
-            // Ignore write errors
-        }
-    }
-}
-// ============================================================================
-// Manifest Resolution
-// ============================================================================
-/**
- * Resolve the skills manifest.
- * Returns a cached version if fresh, otherwise generates a new one.
- *
- * Graceful degradation:
- *   1. Fresh cached manifest (within TTL)
- *   2. Stale cached manifest (expired but valid)
- *   3. Embedded project manifest (skills/manifest.json)
- *   4. Freshly generated manifest
- *
- * @task T4520
- */
-export function resolveManifest(cwd) {
-    const cachePath = getCachedManifestPath();
-    // Strategy 1: Fresh cache
-    if (isCacheFresh(cachePath)) {
-        try {
-            return JSON.parse(readFileSync(cachePath, 'utf-8'));
-        }
-        catch {
-            // Fall through to regenerate
-        }
-    }
-    // Strategy 2: Stale cache (still valid JSON)
-    if (existsSync(cachePath)) {
-        try {
-            const content = readFileSync(cachePath, 'utf-8');
-            if (content.trim()) {
-                const staleManifest = JSON.parse(content);
-                if (staleManifest.skills?.length > 0) {
-                    // Use stale but try to regenerate in background
-                    regenerateCache(cwd);
-                    return staleManifest;
-                }
-            }
-        }
-        catch {
-            // Fall through
-        }
-    }
-    // Strategy 3: Generate fresh manifest
-    const manifest = generateManifest(cwd);
-    // Cache the result
-    try {
-        const cacheDir = getCacheDir();
-        if (!existsSync(cacheDir)) {
-            mkdirSync(cacheDir, { recursive: true });
-        }
-        writeFileSync(cachePath, JSON.stringify(manifest, null, 2), 'utf-8');
-    }
-    catch {
-        // Cache write failure is non-fatal
-    }
-    return manifest;
-}
-/**
- * Force regenerate the cache.
- * @task T4520
- */
-export function regenerateCache(cwd) {
-    const manifest = generateManifest(cwd);
-    const cachePath = getCachedManifestPath();
-    try {
-        const cacheDir = getCacheDir();
-        if (!existsSync(cacheDir)) {
-            mkdirSync(cacheDir, { recursive: true });
-        }
-        writeFileSync(cachePath, JSON.stringify(manifest, null, 2), 'utf-8');
-    }
-    catch {
-        // Cache write failure is non-fatal
-    }
-    return manifest;
-}
-//# sourceMappingURL=resolver.js.map

package/dist/skills/manifests/resolver.js.map

@@ -1 +0,0 @@
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