@apollo-annotation/jbrowse-plugin-apollo 1.1.0 → 1.1.2

package/dist/jbrowse-plugin-apollo.umd.development.js

@@ -6788,11 +6788,16 @@
     var cdsFeatures = [];
     var exonFeatures = [];
     var utrFeatures = [];
+    var seenChildFeatures = new Set();
     var _iterator3 = _createForOfIteratorHelper(childFeatures),
       _step3;
     try {
       for (_iterator3.s(); !(_step3 = _iterator3.n()).done;) {
         var childFeature = _step3.value;
+        if (seenChildFeatures.has(childFeature)) {
+          continue;
+        }
+        seenChildFeatures.add(childFeature);
         var _childFeature = _slicedToArray(childFeature, 1),
           firstChildFeatureLocation = _childFeature[0];
         if (firstChildFeatureLocation.type === 'exon') {
@@ -7115,7 +7120,7 @@
     d: "M19 13h-6v6h-2v-6H5v-2h6V5h2v6h6z"
   }), 'Add');
 
-  var version = "1.1.0";
+  var version = "1.1.2";
 
   const ApolloConfigSchema = configuration.ConfigurationSchema('ApolloInternetAccount', {
       baseURL: {
@@ -29815,7 +29820,15 @@
           }
           // Trim any sequence before first start codon and after stop codon
           const startCodonIndex = proteinSequence.indexOf('M');
-          const stopCodonIndex = proteinSequence.lastIndexOf('*');
+          if (startCodonIndex === -1) {
+              notify('Start codon not found', 'error');
+              return;
+          }
+          const stopCodonIndex = proteinSequence.indexOf('*', startCodonIndex);
+          if (stopCodonIndex === -1) {
+              notify('Stop codon not found', 'error');
+              return;
+          }
           const startCodonPos = startCodonIndex * 3;
           const stopCodonPos = stopCodonIndex * 3;
           const startCodonGenomicLoc = getCodonGenomicLocation(startCodonPos);
@@ -35368,7 +35381,7 @@
       const [selectedDestinationFeature, setSelectedDestinationFeature] = React.useState();
       const apolloAssembly = apolloSessionModel.apolloDataStore.assemblies.get(assembly.name);
       const refSeq = apolloAssembly?.refSeqs.get(refSeqId);
-      const features = refSeq?.getFeatures(region.start, region.end);
+      const features = React.useMemo(() => refSeq?.getFeatures(region.start, region.end), [refSeq, region.start, region.end]);
       React.useEffect(() => {
           const getDestinationFeatures = () => {
               const filteredFeatures = [];