@apollo-annotation/jbrowse-plugin-apollo 1.1.0 → 1.1.2

package/dist/jbrowse-plugin-apollo.cjs.development.js

@@ -70,7 +70,7 @@ var RedoIcon = require('@mui/icons-material/Redo');
 var UndoIcon = require('@mui/icons-material/Undo');
 var SaveIcon = require('@mui/icons-material/Save');
 
-var version = "1.1.0";
+var version = "1.1.2";
 
 const ApolloConfigSchema = configuration.ConfigurationSchema('ApolloInternetAccount', {
     baseURL: {
@@ -7255,7 +7255,15 @@ updateCDSLocation, cdsMin, cdsMax, feature, session, }) {
         }
         // Trim any sequence before first start codon and after stop codon
         const startCodonIndex = proteinSequence.indexOf('M');
-        const stopCodonIndex = proteinSequence.lastIndexOf('*');
+        if (startCodonIndex === -1) {
+            notify('Start codon not found', 'error');
+            return;
+        }
+        const stopCodonIndex = proteinSequence.indexOf('*', startCodonIndex);
+        if (stopCodonIndex === -1) {
+            notify('Stop codon not found', 'error');
+            return;
+        }
         const startCodonPos = startCodonIndex * 3;
         const stopCodonPos = stopCodonIndex * 3;
         const startCodonGenomicLoc = getCodonGenomicLocation(startCodonPos);
@@ -12791,7 +12799,7 @@ function CreateApolloAnnotation({ annotationFeature, assembly, handleClose, refS
     const [selectedDestinationFeature, setSelectedDestinationFeature] = React.useState();
     const apolloAssembly = apolloSessionModel.apolloDataStore.assemblies.get(assembly.name);
     const refSeq = apolloAssembly?.refSeqs.get(refSeqId);
-    const features = refSeq?.getFeatures(region.start, region.end);
+    const features = React.useMemo(() => refSeq?.getFeatures(region.start, region.end), [refSeq, region.start, region.end]);
     React.useEffect(() => {
         const getDestinationFeatures = () => {
             const filteredFeatures = [];