@apollo-annotation/jbrowse-plugin-apollo 1.0.0 → 1.1.0

package/dist/LinearApolloDisplay/stateModel/layouts.d.ts

@@ -1,7 +1,6 @@
 import type { AnnotationFeature } from '@apollo-annotation/mst';
 import type PluginManager from '@jbrowse/core/PluginManager';
 import type { AnyConfigurationSchemaType } from '@jbrowse/core/configuration';
-import type { ApolloSessionModel } from '../../session';
 import type { Layout } from '../glyphs/Glyph';
 export declare function layoutsModelFactory(pluginManager: PluginManager, configSchema: AnyConfigurationSchemaType): import("@jbrowse/mobx-state-tree").IModelType<{
     id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
@@ -203,7 +202,7 @@ export declare function layoutsModelFactory(pluginManager: PluginManager, config
     readonly zoomThresholdSetting: number;
 } & {
     readonly rendererTypeName: any;
-    readonly session: ApolloSessionModel;
+    readonly session: import("../../session").ApolloSessionModel;
     readonly regions: {
         assemblyName: string;
         refName: string;
@@ -214,7 +213,7 @@ export declare function layoutsModelFactory(pluginManager: PluginManager, config
 } & {
     readonly apolloInternetAccount: import("../../ApolloInternetAccount/model").ApolloInternetAccountModel | undefined;
     readonly changeManager: import("../../ChangeManager").ChangeManager;
-    getAssemblyId(assemblyName: string): string;
+    getAssemblyId(assemblyName: string): any;
     readonly selectedFeature: AnnotationFeature | undefined;
     readonly hoveredFeature: import("../../session").HoveredFeature | undefined;
 } & {
@@ -245,22 +244,6 @@ export declare function layoutsModelFactory(pluginManager: PluginManager, config
             type?: undefined;
             checked?: undefined;
         })[];
-        icon?: undefined;
-        onClick?: undefined;
-    } | {
-        label: string;
-        icon: typeof import("../../components").Export;
-        onClick: () => void;
-        type?: undefined;
-        subMenu?: undefined;
-    } | {
-        label: string;
-        icon: import("@mui/material/OverridableComponent").OverridableComponent<import("@mui/material").SvgIconTypeMap<{}, "svg">> & {
-            muiName: string;
-        };
-        onClick: () => void;
-        type?: undefined;
-        subMenu?: undefined;
     })[];
 } & {
     setSelectedFeature(feature?: AnnotationFeature): void;

package/dist/LinearApolloDisplay/stateModel/layouts.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"layouts.d.ts","sourceRoot":"","sources":["../../../src/LinearApolloDisplay/stateModel/layouts.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,wBAAwB,CAAA;AAC/D,OAAO,KAAK,aAAa,MAAM,6BAA6B,CAAA;AAE5D,OAAO,KAAK,EAAE,0BAA0B,EAAE,MAAM,6BAA6B,CAAA;AAgB7E,OAAO,KAAK,EAAE,MAAM,EAAE,MAAM,iBAAiB,CAAA;AAK7C,wBAAgB,mBAAmB,CACjC,aAAa,EAAE,aAAa,EAC5B,YAAY,EAAE,0BAA0B;eAxBK,0BAC7C,wBAAwB,0BAA0B;iBACxB,0BAA0B;0BAC9B,0BAA0B,gBAChD,0BAA0B;;;;;;;;;;;;;;;;;;;;;;;mBAWI,wCACR;;;;mBAIjB,0BAAyB,wBAEnB,0BACX;uBACM,0BAA0B,wBAExB,0BAA0B;yBAEnB,0BAA0B;kCAEzB,0BAEb,gBAAgB,0BACG;;;;;kBAMlB,0BAAoB,yBAClB,0BAAwB;0BAExB,CAAR;kBACsB,CAAC;;;;;;;mBAMY,wCACX;;;;mBAQP,0BACA,wBAAwB,0BACzB;uBACV,0BACa,wBAAwB,0BACnB;yBAIlB,0BAAqB;kCACT,0BACV,gBAAgB,0BAA0B;;;;;kBAKpB,0BACzB,yBACe,0BAA0B;;;iCAEF,oBACvC;;;;;;;;;;;mBAUwC,wCACnB;;;;;;;;;;2BASN,wCACJ;;;;2BASL,0BAA0B,wBAI7B,0BAHuB;+BAA8C,0BACtD,wBAAwB,0BAA0B;iCAEhC,0BAC1B;0CAGK,0BAA0B,gBAAgB,0BAC9C;;;;;0BAKkC,0BACrC,yBACD,0BAEX;kCAAsD,CAAC;0BACxC,CAAA;;;;;;;2BAME,wCACQ;;;;2BAMD,0BAA0B,wBAClC,0BAA0B;+BAE7B,0BACV,wBAEM,0BAAkB;iCAIhB,0BAFsB;0CACX,0BAA0B,gBAAgB,0BACjD;;;;;0BAI6B,0BAA0B,yBACrD,0BACd;;;yCAEmD,oBACzC;;;;mBAIA,0BADW,wBACX,0BAAgB;uBAChB,0BAAwB,wBAAwB,0BAC7C;yBACS,0BAA0B;kCAErC,0BAA0B,gBAAgB,0BACzC;;;;;;;;;;;2BAO6B,wCACzC;;;;2BAGY,0BACE,wBACE,0BAAc;+BAEd,0BAAQ,wBACR,0BAAW;iCAGb,0BAClB;0CAEc,0BACG,gBACH,0BAAe;;;;;0BAIiB,0BACzC,yBAAyB,0BAA0B;kCAExC,CAAN;0BAAwC,CAAC;;;;;;;2BAO/B,wCAAwC;;;;2BAInC,0BAEjB,wBACc,0BAChB;+BACqC,0BAC3B,wBAAwB,0BACjC;iCAGI,0BACF;0CAEC,0BAAqB,gBAEzB,0BAAmB;;;;;0BAOX,0BACN,yBAEA,0BAAqB;;;yCAKrB,oBAAe;;;;kBAOb,0BAAwB,yBAG7B,0BACE;;kCACoB,qCAAa;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;iCA1NL,MAAM;sBAGjB,iBAAiB;;4BAoBX,iBAAiB;iCAGZ,MAAM;;sCAKD,MAAM,UAAU,MAAM;;IAiBxD;;;OAGG;gCACyB,iBAAiB;;;8BAiInB,iBAAiB;wCAW3B,MAAM,WACX,MAAM,OACV,MAAM,MACP,MAAM,GACT,iBAAiB,EAAE;;6BAqBG,MAAM;;;yGAyEpC"}

package/dist/LinearApolloDisplay/stateModel/mouseEvents.d.ts

@@ -233,7 +233,7 @@ export declare function mouseEventsModelIntermediateFactory(pluginManager: Plugi
 } & {
     readonly apolloInternetAccount: import("../../ApolloInternetAccount/model").ApolloInternetAccountModel | undefined;
     readonly changeManager: import("../../ChangeManager").ChangeManager;
-    getAssemblyId(assemblyName: string): string;
+    getAssemblyId(assemblyName: string): any;
     readonly selectedFeature: AnnotationFeature | undefined;
     readonly hoveredFeature: import("../../session").HoveredFeature | undefined;
 } & {
@@ -264,22 +264,6 @@ export declare function mouseEventsModelIntermediateFactory(pluginManager: Plugi
             type?: undefined;
             checked?: undefined;
         })[];
-        icon?: undefined;
-        onClick?: undefined;
-    } | {
-        label: string;
-        icon: typeof import("../../components").Export;
-        onClick: () => void;
-        type?: undefined;
-        subMenu?: undefined;
-    } | {
-        label: string;
-        icon: import("@mui/material/OverridableComponent").OverridableComponent<import("@mui/material").SvgIconTypeMap<{}, "svg">> & {
-            muiName: string;
-        };
-        onClick: () => void;
-        type?: undefined;
-        subMenu?: undefined;
     })[];
 } & {
     setSelectedFeature(feature?: AnnotationFeature): void;
@@ -567,7 +551,7 @@ export declare function mouseEventsModelFactory(pluginManager: PluginManager, co
 } & {
     readonly apolloInternetAccount: import("../../ApolloInternetAccount/model").ApolloInternetAccountModel | undefined;
     readonly changeManager: import("../../ChangeManager").ChangeManager;
-    getAssemblyId(assemblyName: string): string;
+    getAssemblyId(assemblyName: string): any;
     readonly selectedFeature: AnnotationFeature | undefined;
     readonly hoveredFeature: import("../../session").HoveredFeature | undefined;
 } & {
@@ -598,22 +582,6 @@ export declare function mouseEventsModelFactory(pluginManager: PluginManager, co
             type?: undefined;
             checked?: undefined;
         })[];
-        icon?: undefined;
-        onClick?: undefined;
-    } | {
-        label: string;
-        icon: typeof import("../../components").Export;
-        onClick: () => void;
-        type?: undefined;
-        subMenu?: undefined;
-    } | {
-        label: string;
-        icon: import("@mui/material/OverridableComponent").OverridableComponent<import("@mui/material").SvgIconTypeMap<{}, "svg">> & {
-            muiName: string;
-        };
-        onClick: () => void;
-        type?: undefined;
-        subMenu?: undefined;
     })[];
 } & {
     setSelectedFeature(feature?: AnnotationFeature): void;

package/dist/LinearApolloDisplay/stateModel/mouseEvents.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"mouseEvents.d.ts","sourceRoot":"","sources":["../../../src/LinearApolloDisplay/stateModel/mouseEvents.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,wBAAwB,CAAA;AAK/D,OAAO,KAAK,aAAa,MAAM,6BAA6B,CAAA;AAE5D,OAAO,KAAK,EAAE,0BAA0B,EAAE,MAAM,6BAA6B,CAAA;AAC7E,OAAO,KAAK,EAAE,QAAQ,EAAE,MAAM,kBAAkB,CAAA;AAEhD,OAAO,EAAE,KAAK,QAAQ,EAAe,MAAM,0BAA0B,CAAA;AACrE,OAAO,KAAK,EAAE,qBAAqB,EAAE,MAAM,oCAAoC,CAAA;AAE/E,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,OAAO,CAAA;AAE1C,OAAO,EACL,KAAK,IAAI,EAMV,MAAM,YAAY,CAAA;AAEnB,OAAO,KAAK,EAAE,gBAAgB,EAAE,MAAM,UAAU,CAAA;AAIhD,MAAM,WAAW,aAAa;IAC5B,CAAC,EAAE,MAAM,CAAA;IACT,CAAC,EAAE,MAAM,CAAA;IACT,YAAY,EAAE,MAAM,CAAA;IACpB,OAAO,EAAE,MAAM,CAAA;IACf,EAAE,EAAE,MAAM,CAAA;IACV,YAAY,EAAE,MAAM,CAAA;CACrB;AAED,wBAAgB,gBAAgB,CAC9B,KAAK,EAAE,KAAK,CAAC,UAAU,EACvB,GAAG,EAAE,qBAAqB,GACzB,aAAa,CAaf;AAED,wBAAgB,mCAAmC,CACjD,aAAa,EAAE,aAAa,EAC5B,YAAY,EAAE,0BAA0B;eAnDjB,0BAA0B,wBAC/C,0BAA0B;iBACvB,0BAAyB;0BACA,0BAC1B,gBAAgB,0BAA0B;;;;;;;;;;;;;;;;;;;;;;;;;;;;;mBAW5C,wCACU;;;;mBAI6B,0BAE3B,wBACT,0BAEE;uBAEH,0BACa,wBAGF,0BACR;yBAEK,0BACO;kCAEjB,0BAA0B,gBAAgB,0BAC7B;;;;;kBAQc,0BAA0B,yBAGrC,0BAA0B;0BAEvC,CAAC;kBAAgC,CAAC;;;;;;;mBAQ5B,wCACiB;;;;mBAMtB,0BACS,wBAAwB,0BACtC;uBAEM,0BAA0B,wBAAwB,0BACvC;yBAEI,0BAA0B;kCACP,0BACtC,gBAAgB,0BAA0B;;;;;kBAKxB,0BAA0B,yBAC3C,0BAEG;;;iCAED,oBAAqB;;;;;;;;;;;mBASV,wCAEhB;;;;;;;;;;2BAa0B,wCAEtB;;;;2BASE,0BAA0B,wBAAwB,0BACpD;+BAII,0BAA0B,wBACjC,0BAAwB;iCACN,0BAA0B;0CACQ,0BAC5C,gBAAgB,0BACT;;;;;0BAMT,0BACT,yBACW,0BAAmB;kCACP,CAAC;0BAAwC,CAAC;;;;;;;2BAWxD,wCAGP;;;;2BAIO,0BAAuB,wBAChB,0BACZ;+BACwB,0BAElB,wBAAwB,0BAA0B;iCAEvC,0BACR;0CAGF,0BACR,gBACI,0BAEL;;;;;0BAIO,0BAAkB,yBAAyB,0BACxC;;;yCAE4B,oBAC/B;;;;mBAKoC,0BACpC,wBAAwB,0BAA0B;uBAEhD,0BACL,wBAAwB,0BAC9B;yBAGW,0BACZ;kCAE4C,0BACxC,gBAAiB,0BACF;;;;;;;;;;;2BAUL,wCACT;;;;2BAGsB,0BAClB,wBAAwB,0BACnB;+BACI,0BACA,wBACF,0BACK;iCAER,0BAEZ;0CAGwB,0BACnB,gBAAgB,0BAA0B;;;;;0BAIzB,0BACT,yBAAyB,0BAA0B;kCACd,CAAC;0BACpC,CAAC;;;;;;;2BASoB,wCACnB;;;;2BAKkC,0BAC9C,wBAAwB,0BACf;+BAA8C,0BACxD,wBAAwB,0BAA0B;iCAE5C,0BAA0B;0CACT,0BAEvB,gBACM,0BACA;;;;;0BAKW,0BACrB,yBACW,0BACR;;;yCACyD,oBAExD;;;;kBAOW,0BACD,yBACR,0BACiB;;kCAEd,qCAAU;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;oBA7NU;QACtB,KAAK,EAAE,aAAa,CAAA;QACpB,OAAO,EAAE,aAAa,CAAA;QACtB,OAAO,EAAE,iBAAiB,CAAA;QAC1B,IAAI,EAAE,IAAI,CAAA;QACV,YAAY,EAAE,OAAO,CAAA;KACtB,GAAG,IAAI;YACa,aAAa,CAAC,QAAQ,CAAC,GAAG,SAAS;;4BAGhC,KAAK,CAAC,UAAU,GAAG,aAAa;8CAGd,aAAa;;gCAW3B,aAAa,SAAS,gBAAgB;;eAvBzD,aAAa;iBACX,aAAa;iBACb,iBAAiB;cACpB,IAAI;sBACI,OAAO;;;uBAiCJ,aAAa,CAAC,QAAQ,CAAC;qCAMT,MAAM,EAAE;;;yGAU9C;AAED,wBAAgB,uBAAuB,CACrC,aAAa,EAAE,aAAa,EAC5B,YAAY,EAAE,0BAA0B;eAtHjB,0BAA0B,wBAC/C,0BAA0B;iBACvB,0BAAyB;0BACA,0BAC1B,gBAAgB,0BAA0B;;;;;;;;;;;;;;;;;;;;;;;;;;;;;mBAW5C,wCACU;;;;mBAI6B,0BAE3B,wBACT,0BAEE;uBAEH,0BACa,wBAGF,0BACR;yBAEK,0BACO;kCAEjB,0BAA0B,gBAAgB,0BAC7B;;;;;kBAQc,0BAA0B,yBAGrC,0BAA0B;0BAEvC,CAAC;kBAAgC,CAAC;;;;;;;mBAQ5B,wCACiB;;;;mBAMtB,0BACS,wBAAwB,0BACtC;uBAEM,0BAA0B,wBAAwB,0BACvC;yBAEI,0BAA0B;kCACP,0BACtC,gBAAgB,0BAA0B;;;;;kBAKxB,0BAA0B,yBAC3C,0BAEG;;;iCAED,oBAAqB;;;;;;;;;;;mBASV,wCAEhB;;;;;;;;;;2BAa0B,wCAEtB;;;;2BASE,0BAA0B,wBAAwB,0BACpD;+BAII,0BAA0B,wBACjC,0BAAwB;iCACN,0BAA0B;0CACQ,0BAC5C,gBAAgB,0BACT;;;;;0BAMT,0BACT,yBACW,0BAAmB;kCACP,CAAC;0BAAwC,CAAC;;;;;;;2BAWxD,wCAGP;;;;2BAIO,0BAAuB,wBAChB,0BACZ;+BACwB,0BAElB,wBAAwB,0BAA0B;iCAEvC,0BACR;0CAGF,0BACR,gBACI,0BAEL;;;;;0BAIO,0BAAkB,yBAAyB,0BACxC;;;yCAE4B,oBAC/B;;;;mBAKoC,0BACpC,wBAAwB,0BAA0B;uBAEhD,0BACL,wBAAwB,0BAC9B;yBAGW,0BACZ;kCAE4C,0BACxC,gBAAiB,0BACF;;;;;;;;;;;2BAUL,wCACT;;;;2BAGsB,0BAClB,wBAAwB,0BACnB;+BACI,0BACA,wBACF,0BACK;iCAER,0BAEZ;0CAGwB,0BACnB,gBAAgB,0BAA0B;;;;;0BAIzB,0BACT,yBAAyB,0BAA0B;kCACd,CAAC;0BACpC,CAAC;;;;;;;2BASoB,wCACnB;;;;2BAKkC,0BAC9C,wBAAwB,0BACf;+BAA8C,0BACxD,wBAAwB,0BAA0B;iCAE5C,0BAA0B;0CACT,0BAEvB,gBACM,0BACA;;;;;0BAKW,0BACrB,yBACW,0BACR;;;yCACyD,oBAExD;;;;kBAOW,0BACD,yBACR,0BACiB;;kCAEd,qCAAU;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;oBA7NU;QACtB,KAAK,EAAE,aAAa,CAAA;QACpB,OAAO,EAAE,aAAa,CAAA;QACtB,OAAO,EAAE,iBAAiB,CAAA;QAC1B,IAAI,EAAE,IAAI,CAAA;QACV,YAAY,EAAE,OAAO,CAAA;KACtB,GAAG,IAAI;YACa,aAAa,CAAC,QAAQ,CAAC,GAAG,SAAS;;4BAGhC,KAAK,CAAC,UAAU,GAAG,aAAa;8CAGd,aAAa;;gCAW3B,aAAa,SAAS,gBAAgB;;eAvBzD,aAAa;iBACX,aAAa;iBACb,iBAAiB;cACpB,IAAI;sBACI,OAAO;;;uBAiCJ,aAAa,CAAC,QAAQ,CAAC;qCAMT,MAAM,EAAE;;;;4BAsBnB,KAAK,CAAC,UAAU,CAAC,cAAc,CAAC,GAAG,QAAQ,EAAE;;6BA+BhD,aAAa,WACnB,iBAAiB,QACpB,IAAI;;;uBAkEK,gBAAgB;uBAgBhB,gBAAgB;yBAkCd,gBAAgB;qBAIpB,gBAAgB;;;yGAsHtC;AAED,MAAM,MAAM,mCAAmC,GAAG,UAAU,CAC1D,OAAO,mCAAmC,CAC3C,CAAA;AAID,MAAM,WAAW,8BACf,SAAQ,QAAQ,CAAC,mCAAmC,CAAC;CAAG"}

package/dist/LinearApolloDisplay/stateModel/rendering.d.ts

@@ -2,7 +2,6 @@ import type PluginManager from '@jbrowse/core/PluginManager';
 import type { AnyConfigurationSchemaType } from '@jbrowse/core/configuration';
 import { type Instance } from '@jbrowse/mobx-state-tree';
 import { type Theme } from '@mui/material';
-import type { ApolloSessionModel } from '../../session';
 export declare function renderingModelFactory(pluginManager: PluginManager, configSchema: AnyConfigurationSchemaType): import("@jbrowse/mobx-state-tree").IModelType<{
     id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
     type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
@@ -209,7 +208,7 @@ export declare function renderingModelFactory(pluginManager: PluginManager, conf
     readonly zoomThresholdSetting: number;
 } & {
     readonly rendererTypeName: any;
-    readonly session: ApolloSessionModel;
+    readonly session: import("../../session").ApolloSessionModel;
     readonly regions: {
         assemblyName: string;
         refName: string;
@@ -220,7 +219,7 @@ export declare function renderingModelFactory(pluginManager: PluginManager, conf
 } & {
     readonly apolloInternetAccount: import("../../ApolloInternetAccount/model").ApolloInternetAccountModel | undefined;
     readonly changeManager: import("../../ChangeManager").ChangeManager;
-    getAssemblyId(assemblyName: string): string;
+    getAssemblyId(assemblyName: string): any;
     readonly selectedFeature: import("@apollo-annotation/mst").AnnotationFeature | undefined;
     readonly hoveredFeature: import("../../session").HoveredFeature | undefined;
 } & {
@@ -251,22 +250,6 @@ export declare function renderingModelFactory(pluginManager: PluginManager, conf
             type?: undefined;
             checked?: undefined;
         })[];
-        icon?: undefined;
-        onClick?: undefined;
-    } | {
-        label: string;
-        icon: typeof import("../../components").Export;
-        onClick: () => void;
-        type?: undefined;
-        subMenu?: undefined;
-    } | {
-        label: string;
-        icon: import("@mui/material/OverridableComponent").OverridableComponent<import("@mui/material").SvgIconTypeMap<{}, "svg">> & {
-            muiName: string;
-        };
-        onClick: () => void;
-        type?: undefined;
-        subMenu?: undefined;
     })[];
 } & {
     setSelectedFeature(feature?: import("@apollo-annotation/mst").AnnotationFeature): void;

package/dist/LinearApolloDisplay/stateModel/rendering.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"rendering.d.ts","sourceRoot":"","sources":["../../../src/LinearApolloDisplay/stateModel/rendering.ts"],"names":[],"mappings":"AACA,OAAO,KAAK,aAAa,MAAM,6BAA6B,CAAA;AAC5D,OAAO,KAAK,EAAE,0BAA0B,EAAE,MAAM,6BAA6B,CAAA;AAE7E,OAAO,EAAE,KAAK,QAAQ,EAAsB,MAAM,0BAA0B,CAAA;AAC5E,OAAO,EAAE,KAAK,KAAK,EAAe,MAAM,eAAe,CAAA;AAKvD,wBAAgB,qBAAqB,CACnC,aAAa,EAAE,aAAa,EAC5B,YAAY,EAAE,0BAA0B;eATR,0BAC1B,wBAAwB,0BAA0B;iBACvB,0BAC9B;0BAEiB,0BACtB,gBACgB,0BACd;;;;;;;;;;;;;;;;;;;;;;;;;;;;;mBAWO,wCACW;;;;mBAKsB,0BACtB,wBAAwB,0BAC7B;uBAAuC,0BACnC,wBAEZ,0BACE;yBACiB,0BAA0B;kCAE1B,0BACV,gBACR,0BAAkB;;;;;kBAMZ,0BAAyB,yBAC/B,0BAA0B;0BAEnB,CAAC;kBAEJ,CAAC;;;;;;;mBAI8D,wCAErE;;;;mBAGwC,0BAClC,wBAAwB,0BACpB;uBACW,0BACV,wBAAwB,0BAA0B;yBACR,0BAC9C;kCACQ,0BAA0B,gBACpC,0BAA0B;;;;;kBAI3B,0BAAe,yBAAyB,0BAC1B;;;iCAEkB,oBAClC;;;;;;;;;;;mBAWgB,wCAExB;;;;;;;;;;2BAWoB,wCAAwC;;;;2BASpD,0BACK,wBAED,0BACJ;+BAA8C,0BAClD,wBACU,0BACC;iCACE,0BACA;0CAGD,0BAEd,gBAAgB,0BAA0B;;;;;0BAII,0BACzB,yBACL,0BACjB;kCAEe,CAAN;0BAAwC,CAAC;;;;;;;2BAKK,wCACpB;;;;2BAKhB,0BAAsB,wBACpB,0BACT;+BACwB,0BAClB,wBAAwB,0BAA0B;iCACD,0BACnD;0CACU,0BAA0B,gBAAiB,0BAClD;;;;;0BAKoB,0BAEvC,yBACiB,0BACV;;;yCAKA,oBACU;;;;mBAOF,0BAAoB,wBACpB,0BACH;uBAEC,0BACM,wBAAwB,0BAE7B;yBAEC,0BACZ;kCACyC,0BAC7C,gBAAiB,0BACZ;;;;;;;;;;;2BASW,wCAAgC;;;;2BAKK,0BACxC,wBAAwB,0BACjC;+BAA8C,0BAC1C,wBACc,0BAAW;iCAEN,0BACT;0CAEI,0BACX,gBACW,0BAAO;;;;;0BAKW,0BAA0B,yBAChD,0BAEb;kCAAsD,CAAC;0BAC1B,CAAC;;;;;;;2BAML,wCACG;;;;2BAMR,0BAAyB,wBAAwB,0BACpD;+BAEA,0BACd,wBACc,0BACpB;iCAEkB,0BACf;0CAGS,0BACF,gBACE,0BAAyB;;;;;0BAWhB,0BAA0B,yBAAyB,0BACxD;;;yCAEW,oBAAqB;;;;kBACqH,0BAA0B,yBAAyB,0BAA0B;;kCAA6D,qCAAa;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;YAzOxS,iBAAiB,GAAG,IAAI;mBACjB,iBAAiB,GAAG,IAAI;wBACnB,iBAAiB,GAAG,IAAI;;;iCAIvB,MAAM;;;;gCAmDP,MAAM;sBAQhB,iBAAiB,GAAG,IAAI;6BAGjB,iBAAiB,GAAG,IAAI;kCAGnB,iBAAiB,GAAG,IAAI;oBAGtC,KAAK;;;yGAqJ1B;AAED,MAAM,MAAM,iCAAiC,GAAG,UAAU,CACxD,OAAO,qBAAqB,CAC7B,CAAA;AAID,MAAM,WAAW,4BACf,SAAQ,QAAQ,CAAC,iCAAiC,CAAC;CAAG"}

package/dist/LinearApolloReferenceSequenceDisplay/configSchema.d.ts

@@ -0,0 +1,2 @@
+export declare const configSchema: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{}, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
+//# sourceMappingURL=configSchema.d.ts.map

package/dist/LinearApolloReferenceSequenceDisplay/configSchema.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"configSchema.d.ts","sourceRoot":"","sources":["../../src/LinearApolloReferenceSequenceDisplay/configSchema.ts"],"names":[],"mappings":"AAEA,eAAO,MAAM,YAAY,qMAIxB,CAAA"}

package/dist/LinearApolloReferenceSequenceDisplay/stateModel/base.d.ts

@@ -212,7 +212,7 @@ export declare function baseModelFactory(_pluginManager: PluginManager, configSc
     }[];
     readonly apolloInternetAccount: ApolloInternetAccountModel | undefined;
     readonly changeManager: import("../../ChangeManager").ChangeManager;
-    getAssemblyId(assemblyName: string): string;
+    getAssemblyId(assemblyName: string): any;
     readonly selectedFeature: AnnotationFeature | undefined;
     readonly hoveredFeature: HoveredFeature | undefined;
     readonly height: number;

package/dist/LinearApolloReferenceSequenceDisplay/stateModel/base.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"base.d.ts","sourceRoot":"","sources":["../../../src/LinearApolloReferenceSequenceDisplay/stateModel/base.ts"],"names":[],"mappings":"AAKA,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,wBAAwB,CAAA;AAC/D,OAAO,KAAK,aAAa,MAAM,6BAA6B,CAAA;AAE5D,OAAO,EACL,KAAK,0BAA0B,EAGhC,MAAM,6BAA6B,CAAA;AAWpC,OAAO,KAAK,EAAE,qBAAqB,EAAE,MAAM,oCAAoC,CAAA;AAG/E,OAAO,KAAK,EAAE,0BAA0B,EAAE,MAAM,mCAAmC,CAAA;AACnF,OAAO,KAAK,EAAE,kBAAkB,EAAE,cAAc,EAAE,MAAM,eAAe,CAAA;AAKvE,wBAAgB,gBAAgB,CAC9B,cAAc,EAAE,aAAa,EAC7B,YAAY,EAAE,0BAA0B;eA9BzC,0BAA0B,wBAAwB,0BACvC;iBACV,0BAA0B;0BACZ,0BAA0B,gBAAgB,0BAEtD;;;;;;;;;;;;;;;;;;;mBAWU,wCAAwC;;;;mBAEQ,0BAC7C,wBAAwB,0BAA0B;uBAC1C,0BAEN,wBAAwB,0BAA0B;yBACtB,0BAC9C;kCAEK,0BAEH,gBAAgB,0BACR;;;;;kBAKG,0BAA0B,yBAAyB,0BACzC;0BACb,CAAC;kBACE,CAAC;;;;;;;mBAON,wCAGT;;;;mBAKiB,0BACM,wBACX,0BAA0B;uBACL,0BAE9B,wBAGC,0BACD;yBAC4C,0BAA0B;kCAI3D,0BACL,gBAAgB,0BACtB;;;;;kBAKyC,0BACxC,yBAAyB,0BAA0B;;;iCAIxC,oBACb;;;;;;;;;;;mBAasC,wCACtC;;;;;;;;;;2BAQU,wCACQ;;;;2BAQR,0BAA0B,wBAAwB,0BAC1C;+BACM,0BACV,wBAAwB,0BAChC;iCACQ,0BACK;0CAEkB,0BAA0B,gBACzD,0BACgB;;;;;0BAKY,0BAA0B,yBACtD,0BAAyB;kCAEP,CAAC;0BACY,CAAC;;;;;;;2BAO9B,wCAAuC;;;;2BAM3C,0BACW,wBAAwB,0BAC/B;+BACH,0BAEJ,wBAAwB,0BACjB;iCAEA,0BACT;0CAIK,0BACkB,gBACV,0BACd;;;;;0BAMc,0BACb,yBAAyB,0BACZ;;;yCAGc,oBACX;;;;mBAMP,0BAA0B,wBAEhC,0BACkB;uBACe,0BACjC,wBACS,0BACD;yBACF,0BACF;kCAEM,0BACN,gBAAgB,0BACT;;;;;;;;;;;2BAYG,wCACT;;;;2BAMS,0BAAQ,wBACR,0BAAsB;+BAEpB,0BAAgB,wBAClB,0BAElB;iCAMI,0BACJ;0CAGU,0BACG,gBACC,0BAAqB;;;;;0BAKZ,0BACd,yBAEG,0BACD;kCACwC,CAAC;0BAC/B,CAAA;;;;;;;2BAO8K,wCAAwC;;;;2BAAyL,0BAA0B,wBAAwB,0BAA0B;+BAA8C,0BAA0B,wBAAwB,0BAA0B;iCAAsE,0BAA0B;0CAAiE,0BAA0B,gBAAgB,0BAA0B;;;;;0BAAgN,0BAA0B,yBAAyB,0BAA0B;;;yCAA6H,oBAAqB;;;;kBAA8K,0BAA0B,yBAAyB,0BAA0B;;kCAA6D,qCAAa;;;;;;;;;;;;;kBAtL9gD,qBAAqB;;;sBAQ5B,kBAAkB;;;;;;;;;;;;;;;oCAwDnD,0BAA0B,GAAG,SAAS;;gCAKjB,MAAM;;;;;;;4BA0BV,MAAM;6BAGL,MAAM;2BAIR,MAAM;;;;;;;;;;;;;;;;;yGA+ElC"}

package/dist/LinearApolloReferenceSequenceDisplay/stateModel/index.d.ts

@@ -209,7 +209,7 @@ export declare function stateModelFactory(pluginManager: PluginManager, configSc
     }[];
     readonly apolloInternetAccount: import("../../ApolloInternetAccount/model").ApolloInternetAccountModel | undefined;
     readonly changeManager: import("../../ChangeManager").ChangeManager;
-    getAssemblyId(assemblyName: string): string;
+    getAssemblyId(assemblyName: string): any;
     readonly selectedFeature: import("@apollo-annotation/mst").AnnotationFeature | undefined;
     readonly hoveredFeature: import("../../session").HoveredFeature | undefined;
     readonly height: number;

package/dist/LinearApolloReferenceSequenceDisplay/stateModel/rendering.d.ts

@@ -210,7 +210,7 @@ export declare function renderingModelFactory(pluginManager: PluginManager, conf
     }[];
     readonly apolloInternetAccount: import("../../ApolloInternetAccount/model").ApolloInternetAccountModel | undefined;
     readonly changeManager: import("../../ChangeManager").ChangeManager;
-    getAssemblyId(assemblyName: string): string;
+    getAssemblyId(assemblyName: string): any;
     readonly selectedFeature: import("@apollo-annotation/mst").AnnotationFeature | undefined;
     readonly hoveredFeature: import("../../session").HoveredFeature | undefined;
     readonly height: number;

package/dist/LinearApolloSixFrameDisplay/components/LinearApolloSixFrameDisplay.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"LinearApolloSixFrameDisplay.d.ts","sourceRoot":"","sources":["../../../src/LinearApolloSixFrameDisplay/components/LinearApolloSixFrameDisplay.tsx"],"names":[],"mappings":"AAyBA,OAAO,KAAK,EAAE,2BAA2B,IAAI,4BAA4B,EAAE,MAAM,eAAe,CAAA;AAIhG,UAAU,gCAAgC;IACxC,KAAK,EAAE,4BAA4B,CAAA;CACpC;AAED,eAAO,MAAM,2BAA2B,UAE7B,gCAAgC,wEA0Q1C,CAAA"}
+{"version":3,"file":"LinearApolloSixFrameDisplay.d.ts","sourceRoot":"","sources":["../../../src/LinearApolloSixFrameDisplay/components/LinearApolloSixFrameDisplay.tsx"],"names":[],"mappings":"AA0BA,OAAO,KAAK,EAAE,2BAA2B,IAAI,4BAA4B,EAAE,MAAM,eAAe,CAAA;AAIhG,UAAU,gCAAgC;IACxC,KAAK,EAAE,4BAA4B,CAAA;CACpC;AAED,eAAO,MAAM,2BAA2B,UAE7B,gCAAgC,wEA2Q1C,CAAA"}

package/dist/LinearApolloSixFrameDisplay/configSchema.d.ts

@@ -0,0 +1,2 @@
+export declare const configSchema: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{}, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
+//# sourceMappingURL=configSchema.d.ts.map

package/dist/LinearApolloSixFrameDisplay/configSchema.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"configSchema.d.ts","sourceRoot":"","sources":["../../src/LinearApolloSixFrameDisplay/configSchema.ts"],"names":[],"mappings":"AAEA,eAAO,MAAM,YAAY,qMAIxB,CAAA"}

package/dist/LinearApolloSixFrameDisplay/glyphs/GeneGlyph.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"GeneGlyph.d.ts","sourceRoot":"","sources":["../../../src/LinearApolloSixFrameDisplay/glyphs/GeneGlyph.ts"],"names":[],"mappings":"AA0CA,OAAO,KAAK,EAAE,KAAK,EAAE,MAAM,SAAS,CAAA;AAs8BpC,eAAO,MAAM,SAAS,EAAE,KAWvB,CAAA"}
+{"version":3,"file":"GeneGlyph.d.ts","sourceRoot":"","sources":["../../../src/LinearApolloSixFrameDisplay/glyphs/GeneGlyph.ts"],"names":[],"mappings":"AAyCA,OAAO,KAAK,EAAE,KAAK,EAAE,MAAM,SAAS,CAAA;AAs8BpC,eAAO,MAAM,SAAS,EAAE,KAWvB,CAAA"}

package/dist/LinearApolloSixFrameDisplay/stateModel/base.d.ts

@@ -214,7 +214,7 @@ export declare function baseModelFactory(_pluginManager: PluginManager, configSc
 } & {
     readonly apolloInternetAccount: ApolloInternetAccountModel | undefined;
     readonly changeManager: import("../../ChangeManager").ChangeManager;
-    getAssemblyId(assemblyName: string): string;
+    getAssemblyId(assemblyName: string): any;
     readonly selectedFeature: AnnotationFeature | undefined;
     readonly hoveredFeature: HoveredFeature | undefined;
 } & {

package/dist/LinearApolloSixFrameDisplay/stateModel/base.d.ts.map

@@ -1 +1 @@
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package/dist/LinearApolloSixFrameDisplay/stateModel/index.d.ts

@@ -234,7 +234,7 @@ export declare function stateModelFactory(pluginManager: PluginManager, configSc
 } & {
     readonly apolloInternetAccount: import("../../ApolloInternetAccount/model").ApolloInternetAccountModel | undefined;
     readonly changeManager: import("../../ChangeManager").ChangeManager;
-    getAssemblyId(assemblyName: string): string;
+    getAssemblyId(assemblyName: string): any;
     readonly selectedFeature: import("@apollo-annotation/mst").AnnotationFeature | undefined;
     readonly hoveredFeature: import("../../session").HoveredFeature | undefined;
 } & {

package/dist/LinearApolloSixFrameDisplay/stateModel/index.d.ts.map

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package/dist/LinearApolloSixFrameDisplay/stateModel/layouts.d.ts

@@ -1,7 +1,6 @@
 import type { AnnotationFeature } from '@apollo-annotation/mst';
 import type PluginManager from '@jbrowse/core/PluginManager';
 import type { AnyConfigurationSchemaType } from '@jbrowse/core/configuration';
-import type { ApolloSessionModel } from '../../session';
 export interface LayoutRow {
     rowNum: number;
     feature: AnnotationFeature;
@@ -207,7 +206,7 @@ export declare function layoutsModelFactory(pluginManager: PluginManager, config
     readonly zoomThresholdSetting: number;
 } & {
     readonly rendererTypeName: any;
-    readonly session: ApolloSessionModel;
+    readonly session: import("../../session").ApolloSessionModel;
     readonly regions: {
         assemblyName: string;
         refName: string;
@@ -218,7 +217,7 @@ export declare function layoutsModelFactory(pluginManager: PluginManager, config
 } & {
     readonly apolloInternetAccount: import("../../ApolloInternetAccount/model").ApolloInternetAccountModel | undefined;
     readonly changeManager: import("../../ChangeManager").ChangeManager;
-    getAssemblyId(assemblyName: string): string;
+    getAssemblyId(assemblyName: string): any;
     readonly selectedFeature: AnnotationFeature | undefined;
     readonly hoveredFeature: import("../../session").HoveredFeature | undefined;
 } & {

package/dist/LinearApolloSixFrameDisplay/stateModel/layouts.d.ts.map

@@ -1 +1 @@
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package/dist/LinearApolloSixFrameDisplay/stateModel/mouseEvents.d.ts

@@ -225,7 +225,7 @@ export declare function mouseEventsModelIntermediateFactory(pluginManager: Plugi
 } & {
     readonly apolloInternetAccount: import("../../ApolloInternetAccount/model").ApolloInternetAccountModel | undefined;
     readonly changeManager: import("../../ChangeManager").ChangeManager;
-    getAssemblyId(assemblyName: string): string;
+    getAssemblyId(assemblyName: string): any;
     readonly selectedFeature: AnnotationFeature | undefined;
     readonly hoveredFeature: import("../../session").HoveredFeature | undefined;
 } & {
@@ -547,7 +547,7 @@ export declare function mouseEventsModelFactory(pluginManager: PluginManager, co
 } & {
     readonly apolloInternetAccount: import("../../ApolloInternetAccount/model").ApolloInternetAccountModel | undefined;
     readonly changeManager: import("../../ChangeManager").ChangeManager;
-    getAssemblyId(assemblyName: string): string;
+    getAssemblyId(assemblyName: string): any;
     readonly selectedFeature: AnnotationFeature | undefined;
     readonly hoveredFeature: import("../../session").HoveredFeature | undefined;
 } & {

package/dist/LinearApolloSixFrameDisplay/stateModel/mouseEvents.d.ts.map

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package/dist/LinearApolloSixFrameDisplay/stateModel/rendering.d.ts

@@ -2,7 +2,6 @@ import type PluginManager from '@jbrowse/core/PluginManager';
 import type { AnyConfigurationSchemaType } from '@jbrowse/core/configuration';
 import { type Instance } from '@jbrowse/mobx-state-tree';
 import { type Theme } from '@mui/material';
-import type { ApolloSessionModel } from '../../session';
 export declare function renderingModelFactory(pluginManager: PluginManager, configSchema: AnyConfigurationSchemaType): import("@jbrowse/mobx-state-tree").IModelType<{
     id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
     type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
@@ -211,7 +210,7 @@ export declare function renderingModelFactory(pluginManager: PluginManager, conf
     readonly zoomThresholdSetting: number;
 } & {
     readonly rendererTypeName: any;
-    readonly session: ApolloSessionModel;
+    readonly session: import("../../session").ApolloSessionModel;
     readonly regions: {
         assemblyName: string;
         refName: string;
@@ -222,7 +221,7 @@ export declare function renderingModelFactory(pluginManager: PluginManager, conf
 } & {
     readonly apolloInternetAccount: import("../../ApolloInternetAccount/model").ApolloInternetAccountModel | undefined;
     readonly changeManager: import("../../ChangeManager").ChangeManager;
-    getAssemblyId(assemblyName: string): string;
+    getAssemblyId(assemblyName: string): any;
     readonly selectedFeature: import("@apollo-annotation/mst").AnnotationFeature | undefined;
     readonly hoveredFeature: import("../../session").HoveredFeature | undefined;
 } & {

package/dist/LinearApolloSixFrameDisplay/stateModel/rendering.d.ts.map

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package/dist/OntologyManager/OntologyStore/fulltext.d.ts.map

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