@apollo-annotation/jbrowse-plugin-apollo 0.3.13 → 1.0.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (192) hide show
  1. package/dist/ApolloRefNameAliasAdapter/ApolloRefNameAliasAdapter.d.ts +1 -1
  2. package/dist/ApolloRefNameAliasAdapter/ApolloRefNameAliasAdapter.d.ts.map +1 -1
  3. package/dist/BackendDrivers/BackendDriver.d.ts +29 -4
  4. package/dist/BackendDrivers/BackendDriver.d.ts.map +1 -1
  5. package/dist/BackendDrivers/CollaborationServerDriver.d.ts +3 -1
  6. package/dist/BackendDrivers/CollaborationServerDriver.d.ts.map +1 -1
  7. package/dist/BackendDrivers/LocalDriver/LocalDriver.d.ts +22 -0
  8. package/dist/BackendDrivers/LocalDriver/LocalDriver.d.ts.map +1 -0
  9. package/dist/BackendDrivers/LocalDriver/db.d.ts +4 -0
  10. package/dist/BackendDrivers/LocalDriver/db.d.ts.map +1 -0
  11. package/dist/BackendDrivers/index.d.ts +1 -2
  12. package/dist/BackendDrivers/index.d.ts.map +1 -1
  13. package/dist/ChangeManager.d.ts +3 -3
  14. package/dist/ChangeManager.d.ts.map +1 -1
  15. package/dist/FeatureDetailsWidget/ApolloTranscriptDetailsWidget.d.ts +0 -6
  16. package/dist/FeatureDetailsWidget/ApolloTranscriptDetailsWidget.d.ts.map +1 -1
  17. package/dist/FeatureDetailsWidget/TranscriptWidgetEditLocation.d.ts.map +1 -1
  18. package/dist/FeatureDetailsWidget/model.d.ts +0 -2
  19. package/dist/FeatureDetailsWidget/model.d.ts.map +1 -1
  20. package/dist/LinearApolloDisplay/components/CheckResultWarnings.d.ts.map +1 -1
  21. package/dist/LinearApolloDisplay/components/LinearApolloDisplay.d.ts.map +1 -1
  22. package/dist/LinearApolloDisplay/components/OverlayCanvas.d.ts +7 -0
  23. package/dist/LinearApolloDisplay/components/OverlayCanvas.d.ts.map +1 -0
  24. package/dist/LinearApolloDisplay/components/Tooltip.d.ts +10 -0
  25. package/dist/LinearApolloDisplay/components/Tooltip.d.ts.map +1 -0
  26. package/dist/LinearApolloDisplay/glyphs/BoxGlyph.d.ts +0 -1
  27. package/dist/LinearApolloDisplay/glyphs/BoxGlyph.d.ts.map +1 -1
  28. package/dist/LinearApolloDisplay/glyphs/CDSGlyph.d.ts +3 -0
  29. package/dist/LinearApolloDisplay/glyphs/CDSGlyph.d.ts.map +1 -0
  30. package/dist/LinearApolloDisplay/glyphs/ExonGlyph.d.ts +3 -0
  31. package/dist/LinearApolloDisplay/glyphs/ExonGlyph.d.ts.map +1 -0
  32. package/dist/LinearApolloDisplay/glyphs/GeneGlyph.d.ts.map +1 -1
  33. package/dist/LinearApolloDisplay/glyphs/GenericChildGlyph.d.ts.map +1 -1
  34. package/dist/LinearApolloDisplay/glyphs/Glyph.d.ts +26 -20
  35. package/dist/LinearApolloDisplay/glyphs/Glyph.d.ts.map +1 -1
  36. package/dist/LinearApolloDisplay/glyphs/TranscriptGlyph.d.ts +3 -0
  37. package/dist/LinearApolloDisplay/glyphs/TranscriptGlyph.d.ts.map +1 -0
  38. package/dist/LinearApolloDisplay/glyphs/util.d.ts +13 -0
  39. package/dist/LinearApolloDisplay/glyphs/util.d.ts.map +1 -1
  40. package/dist/LinearApolloDisplay/stateModel/base.d.ts +17 -0
  41. package/dist/LinearApolloDisplay/stateModel/base.d.ts.map +1 -1
  42. package/dist/LinearApolloDisplay/stateModel/index.d.ts +35 -17
  43. package/dist/LinearApolloDisplay/stateModel/index.d.ts.map +1 -1
  44. package/dist/LinearApolloDisplay/stateModel/layouts.d.ts +29 -7
  45. package/dist/LinearApolloDisplay/stateModel/layouts.d.ts.map +1 -1
  46. package/dist/LinearApolloDisplay/stateModel/mouseEvents.d.ts +69 -23
  47. package/dist/LinearApolloDisplay/stateModel/mouseEvents.d.ts.map +1 -1
  48. package/dist/LinearApolloDisplay/stateModel/rendering.d.ts +26 -9
  49. package/dist/LinearApolloDisplay/stateModel/rendering.d.ts.map +1 -1
  50. package/dist/LinearApolloReferenceSequenceDisplay/stateModel/base.d.ts +6 -0
  51. package/dist/LinearApolloReferenceSequenceDisplay/stateModel/base.d.ts.map +1 -1
  52. package/dist/LinearApolloReferenceSequenceDisplay/stateModel/index.d.ts +6 -0
  53. package/dist/LinearApolloReferenceSequenceDisplay/stateModel/index.d.ts.map +1 -1
  54. package/dist/LinearApolloReferenceSequenceDisplay/stateModel/rendering.d.ts +6 -0
  55. package/dist/LinearApolloReferenceSequenceDisplay/stateModel/rendering.d.ts.map +1 -1
  56. package/dist/LinearApolloSixFrameDisplay/components/LinearApolloSixFrameDisplay.d.ts.map +1 -1
  57. package/dist/LinearApolloSixFrameDisplay/glyphs/GeneGlyph.d.ts.map +1 -1
  58. package/dist/LinearApolloSixFrameDisplay/glyphs/Glyph.d.ts +1 -1
  59. package/dist/LinearApolloSixFrameDisplay/glyphs/Glyph.d.ts.map +1 -1
  60. package/dist/LinearApolloSixFrameDisplay/stateModel/layouts.d.ts.map +1 -1
  61. package/dist/LinearApolloSixFrameDisplay/stateModel/rendering.d.ts.map +1 -1
  62. package/dist/OntologyManager/OntologyStore/fulltext.d.ts +1 -1
  63. package/dist/OntologyManager/OntologyStore/fulltext.d.ts.map +1 -1
  64. package/dist/OntologyManager/OntologyStore/index.d.ts +2 -2
  65. package/dist/OntologyManager/OntologyStore/index.d.ts.map +1 -1
  66. package/dist/OntologyManager/OntologyStore/indexeddb-storage.d.ts +1 -1
  67. package/dist/OntologyManager/OntologyStore/indexeddb-storage.d.ts.map +1 -1
  68. package/dist/OntologyManager/OntologyStore/types.d.ts +18 -0
  69. package/dist/OntologyManager/OntologyStore/types.d.ts.map +1 -0
  70. package/dist/TabularEditor/HybridGrid/featureContextMenuItems.d.ts.map +1 -1
  71. package/dist/components/AddChildFeature.d.ts.map +1 -1
  72. package/dist/components/ColorFeature.d.ts +13 -0
  73. package/dist/components/ColorFeature.d.ts.map +1 -0
  74. package/dist/components/CreateApolloAnnotation.d.ts.map +1 -1
  75. package/dist/components/DownloadGFF3.d.ts +4 -1
  76. package/dist/components/DownloadGFF3.d.ts.map +1 -1
  77. package/dist/components/DuplicateTranscript.d.ts.map +1 -1
  78. package/dist/components/ViewChangeLog.d.ts +2 -1
  79. package/dist/components/ViewChangeLog.d.ts.map +1 -1
  80. package/dist/components/ViewCheckResults.d.ts +2 -1
  81. package/dist/components/ViewCheckResults.d.ts.map +1 -1
  82. package/dist/components/index.d.ts +1 -1
  83. package/dist/components/index.d.ts.map +1 -1
  84. package/dist/config.d.ts +4 -0
  85. package/dist/config.d.ts.map +1 -0
  86. package/dist/extensions/annotationFromJBrowseFeature.d.ts.map +1 -1
  87. package/dist/extensions/annotationFromPileup.d.ts.map +1 -1
  88. package/dist/index.d.ts +11 -0
  89. package/dist/index.d.ts.map +1 -0
  90. package/dist/index.esm.js +6325 -5997
  91. package/dist/index.esm.js.map +1 -1
  92. package/dist/jbrowse-plugin-apollo.cjs.development.js +5869 -5541
  93. package/dist/jbrowse-plugin-apollo.cjs.development.js.map +1 -1
  94. package/dist/jbrowse-plugin-apollo.cjs.production.min.js +1 -1
  95. package/dist/jbrowse-plugin-apollo.cjs.production.min.js.map +1 -1
  96. package/dist/jbrowse-plugin-apollo.umd.development.js +16782 -25897
  97. package/dist/jbrowse-plugin-apollo.umd.development.js.map +1 -1
  98. package/dist/jbrowse-plugin-apollo.umd.production.min.js +1 -1
  99. package/dist/jbrowse-plugin-apollo.umd.production.min.js.map +1 -1
  100. package/dist/makeDisplayComponent.d.ts.map +1 -1
  101. package/dist/menus/Icons.d.ts +3 -0
  102. package/dist/menus/Icons.d.ts.map +1 -0
  103. package/dist/menus/topLevelMenu.d.ts.map +1 -1
  104. package/dist/session/changeHandlers.d.ts +9 -0
  105. package/dist/session/changeHandlers.d.ts.map +1 -0
  106. package/dist/util/annotationFeatureUtils.d.ts +2 -1
  107. package/dist/util/annotationFeatureUtils.d.ts.map +1 -1
  108. package/dist/util/glyphUtils.d.ts +3 -3
  109. package/dist/util/glyphUtils.d.ts.map +1 -1
  110. package/dist/util/index.d.ts +0 -1
  111. package/dist/util/index.d.ts.map +1 -1
  112. package/package.json +4 -4
  113. package/src/ApolloInternetAccount/model.ts +68 -4
  114. package/src/ApolloRefNameAliasAdapter/ApolloRefNameAliasAdapter.ts +6 -3
  115. package/src/ApolloTextSearchAdapter/ApolloTextSearchAdapter.ts +1 -1
  116. package/src/BackendDrivers/BackendDriver.ts +36 -3
  117. package/src/BackendDrivers/CollaborationServerDriver.ts +78 -23
  118. package/src/BackendDrivers/LocalDriver/LocalDriver.ts +367 -0
  119. package/src/BackendDrivers/LocalDriver/db.ts +37 -0
  120. package/src/BackendDrivers/index.ts +1 -2
  121. package/src/ChangeManager.ts +27 -25
  122. package/src/FeatureDetailsWidget/ApolloTranscriptDetailsWidget.tsx +1 -1
  123. package/src/FeatureDetailsWidget/TranscriptWidgetEditLocation.tsx +69 -53
  124. package/src/LinearApolloDisplay/components/CheckResultWarnings.tsx +1 -5
  125. package/src/LinearApolloDisplay/components/LinearApolloDisplay.tsx +95 -115
  126. package/src/LinearApolloDisplay/components/OverlayCanvas.tsx +76 -0
  127. package/src/LinearApolloDisplay/components/Tooltip.tsx +42 -0
  128. package/src/LinearApolloDisplay/glyphs/BoxGlyph.ts +60 -302
  129. package/src/LinearApolloDisplay/glyphs/CDSGlyph.ts +145 -0
  130. package/src/LinearApolloDisplay/glyphs/ExonGlyph.ts +212 -0
  131. package/src/LinearApolloDisplay/glyphs/GeneGlyph.ts +65 -999
  132. package/src/LinearApolloDisplay/glyphs/GenericChildGlyph.ts +71 -181
  133. package/src/LinearApolloDisplay/glyphs/Glyph.ts +42 -66
  134. package/src/LinearApolloDisplay/glyphs/TranscriptGlyph.ts +291 -0
  135. package/src/LinearApolloDisplay/glyphs/util.ts +87 -0
  136. package/src/LinearApolloDisplay/stateModel/base.ts +83 -0
  137. package/src/LinearApolloDisplay/stateModel/layouts.ts +198 -138
  138. package/src/LinearApolloDisplay/stateModel/mouseEvents.ts +252 -158
  139. package/src/LinearApolloDisplay/stateModel/rendering.ts +103 -21
  140. package/src/LinearApolloReferenceSequenceDisplay/drawSequenceOverlay.ts +3 -3
  141. package/src/LinearApolloReferenceSequenceDisplay/stateModel/base.ts +20 -2
  142. package/src/LinearApolloSixFrameDisplay/components/LinearApolloSixFrameDisplay.tsx +7 -2
  143. package/src/LinearApolloSixFrameDisplay/glyphs/GeneGlyph.ts +8 -13
  144. package/src/LinearApolloSixFrameDisplay/glyphs/Glyph.ts +1 -1
  145. package/src/LinearApolloSixFrameDisplay/stateModel/layouts.ts +4 -3
  146. package/src/LinearApolloSixFrameDisplay/stateModel/mouseEvents.ts +1 -1
  147. package/src/LinearApolloSixFrameDisplay/stateModel/rendering.ts +2 -1
  148. package/src/OntologyManager/OntologyStore/__snapshots__/index.test.ts.snap +18262 -8519
  149. package/src/OntologyManager/OntologyStore/fulltext.ts +1 -2
  150. package/src/OntologyManager/OntologyStore/index.test.ts +5 -2
  151. package/src/OntologyManager/OntologyStore/index.ts +7 -8
  152. package/src/OntologyManager/OntologyStore/indexeddb-storage.ts +2 -2
  153. package/src/OntologyManager/OntologyStore/types.ts +27 -0
  154. package/src/OntologyManager/index.ts +15 -26
  155. package/src/TabularEditor/HybridGrid/featureContextMenuItems.ts +4 -5
  156. package/src/components/AddChildFeature.tsx +15 -8
  157. package/src/components/ColorFeature.tsx +167 -0
  158. package/src/components/CreateApolloAnnotation.tsx +35 -9
  159. package/src/components/DownloadGFF3.tsx +92 -121
  160. package/src/components/DuplicateTranscript.tsx +10 -0
  161. package/src/components/ViewChangeLog.tsx +123 -83
  162. package/src/components/ViewCheckResults.tsx +15 -73
  163. package/src/components/index.ts +1 -1
  164. package/src/config.ts +37 -19
  165. package/src/extensions/annotationFromJBrowseFeature.test.ts +1 -1
  166. package/src/extensions/annotationFromJBrowseFeature.ts +91 -63
  167. package/src/extensions/annotationFromPileup.ts +40 -40
  168. package/src/index.ts +45 -1
  169. package/src/makeDisplayComponent.tsx +10 -3
  170. package/src/menus/Icons.tsx +49 -0
  171. package/src/menus/topLevelMenu.ts +24 -96
  172. package/src/session/ClientDataStore.ts +16 -17
  173. package/src/session/changeHandlers.ts +261 -0
  174. package/src/session/session.ts +77 -46
  175. package/src/util/annotationFeatureUtils.ts +29 -1
  176. package/src/util/glyphUtils.ts +74 -31
  177. package/src/util/index.ts +0 -1
  178. package/dist/BackendDrivers/DesktopFileDriver.d.ts +0 -160
  179. package/dist/BackendDrivers/DesktopFileDriver.d.ts.map +0 -1
  180. package/dist/BackendDrivers/InMemoryFileDriver.d.ts +0 -162
  181. package/dist/BackendDrivers/InMemoryFileDriver.d.ts.map +0 -1
  182. package/dist/LinearApolloDisplay/glyphs/index.d.ts +0 -4
  183. package/dist/LinearApolloDisplay/glyphs/index.d.ts.map +0 -1
  184. package/dist/components/OpenLocalFile.d.ts +0 -15
  185. package/dist/components/OpenLocalFile.d.ts.map +0 -1
  186. package/dist/util/loadAssemblyIntoClient.d.ts +0 -5
  187. package/dist/util/loadAssemblyIntoClient.d.ts.map +0 -1
  188. package/src/BackendDrivers/DesktopFileDriver.ts +0 -184
  189. package/src/BackendDrivers/InMemoryFileDriver.ts +0 -107
  190. package/src/LinearApolloDisplay/glyphs/index.ts +0 -3
  191. package/src/components/OpenLocalFile.tsx +0 -189
  192. package/src/util/loadAssemblyIntoClient.ts +0 -94
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+ {"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../../src/OntologyManager/OntologyStore/index.ts"],"names":[],"mappings":"AAGA,OAAO,EACL,KAAK,YAAY,EACjB,KAAK,iBAAiB,EACtB,KAAK,WAAW,EAGjB,MAAM,oBAAoB,CAAA;AAC3B,OAAO,EACL,KAAK,eAAe,EAEpB,KAAK,UAAU,EAEhB,MAAM,qBAAqB,CAAA;AAE5B,OAAO,EAAE,UAAU,EAAE,MAAM,YAAY,CAAA;AACvC,OAAO,EACL,KAAK,UAAU,EAGhB,MAAM,oBAAoB,CAAA;AAC3B,OAAO,EAEL,iBAAiB,EACjB,gBAAgB,EAChB,YAAY,EACb,MAAM,qBAAqB,CAAA;AAC5B,OAAO,EACL,KAAK,aAAa,EAClB,KAAK,gBAAgB,EACrB,KAAK,YAAY,EAGlB,MAAM,SAAS,CAAA;AAEhB,MAAM,MAAM,cAAc,GAAG,WAAW,GAAG,iBAAiB,GAAG,YAAY,CAAA;AAE3E,gEAAgE;AAChE,MAAM,MAAM,WAAW,CACrB,QAAQ,SAAS,SAAS,CAAC,UAAU,CAAC,UAAU,CAAC,CAAC,GAAG,SAAS,CAC5D,UAAU,CAAC,UAAU,CAAC,CACvB,EACD,IAAI,SAAS,kBAAkB,GAAG,UAAU,IAC1C,eAAe,CAAC,UAAU,EAAE,QAAQ,EAAE,IAAI,CAAC,CAAA;AAE/C,4CAA4C;AAC5C,KAAK,UAAU,GAAG,gBAAgB,GAAG,KAAK,GAAG,KAAK,CAAA;AAmBlD,MAAM,WAAW,oBAAoB;IACnC,QAAQ,CAAC,EAAE,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,CAAA;IAC9B,YAAY,CAAC,EAAE;QACb,6DAA6D;QAC7D,WAAW,CAAC,EAAE;YAAE,WAAW,EAAE,MAAM,CAAC;YAAC,QAAQ,EAAE,MAAM,CAAA;SAAE,EAAE,CAAA;KAC1D,CAAA;IACD,gBAAgB,CAAC,EAAE,MAAM,CAAA;IACzB,MAAM,CAAC,CAAC,OAAO,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,GAAG,IAAI,CAAA;CACjD;AAED,MAAM,WAAW,iBAAiB;IAChC,mBAAmB;IACnB,oBAAoB,EAAE,OAAO,CAAA;CAC9B;AAED,8CAA8C;AAC9C,MAAM,CAAC,OAAO,OAAO,aAAa;IAChC,YAAY,EAAE,MAAM,CAAA;IACpB,eAAe,EAAE,MAAM,CAAA;IACvB,cAAc,EAAE,cAAc,CAAA;IAC9B,EAAE,EAAE,UAAU,CAAC,aAAa,CAAC,iBAAiB,CAAC,CAAC,CAAA;IAChD,OAAO,EAAE,oBAAoB,CAAA;IAE7B,gBAAgB,0BAAmB;IACnC,kBAAkB,oBAAa;IAC/B,YAAY,sBAAe;IAC3B,iBAAiB,2BAAoB;IAErC,IAAI,eAAe,iDAElB;IAED,IAAI,QAAQ,IAAI,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,CAElC;IAED,QAAQ,CAAC,0BAA0B,OAAM;gBAGvC,IAAI,EAAE,MAAM,EACZ,OAAO,EAAE,MAAM,EACf,MAAM,EAAE,cAAc,EACtB,OAAO,CAAC,EAAE,oBAAoB;IAShC;;;OAGG;IACH,QAAQ;IA0BR,IAAI,UAAU,IAAI,UAAU,GAAG,SAAS,CAYvC;IAED,4DAA4D;IAC5D,IAAI,MAAM,WAET;IAEK,eAAe;IAoCf,SAAS,CAAC,EAAE,CAAC,EAAE,WAAW,CAAC,CAAC,OAAO,CAAC,CAAC;IAM3C,OAAO,CAAC,MAAM;IAYR,0BAA0B,CAC9B,kBAAkB,EAAE,MAAM,EAC1B,OAAO,CAAC,EAAE;QAAE,iBAAiB,CAAC,EAAE,OAAO,CAAA;KAAE,EACzC,EAAE,CAAC,EAAE,WAAW,CAAC,CAAC,OAAO,EAAE,OAAO,CAAC,CAAC,GACnC,OAAO,CAAC,YAAY,EAAE,CAAC;IA8B1B;;;;;;;;;OASG;IACG,oBAAoB,CACxB,aAAa,EAAE,MAAM,EACrB,OAAO,CAAC,EAAE,iBAAiB,EAC3B,EAAE,CAAC,EAAE,WAAW,CAAC,CAAC,OAAO,EAAE,OAAO,CAAC,CAAC,GACnC,OAAO,CAAC,gBAAgB,EAAE,CAAC;IAoC9B,8GAA8G;YAChG,YAAY;IAmC1B;;;QAGI;YACW,aAAa;IAwB5B;;OAEG;IACH,gBAAgB,CACd,eAAe,EAAE,QAAQ,CAAC,MAAM,CAAC,EACjC,gBAAgB,SAAS,EACzB,EAAE,CAAC,EAAE,WAAW,CAAC,CAAC,OAAO,CAAC,CAAC;IAU7B;;OAEG;IACH,kBAAkB,CAChB,eAAe,EAAE,QAAQ,CAAC,MAAM,CAAC,EACjC,gBAAgB,SAAS,EACzB,EAAE,CAAC,EAAE,WAAW,CAAC,CAAC,OAAO,CAAC,CAAC;IAU7B;;;OAGG;IACG,cAAc,CAClB,aAAa,EAAE,MAAM,EACrB,WAAW,EAAE,aAAa,EAAE,EAC5B,EAAE,CAAC,EAAE,WAAW,CAAC,CAAC,OAAO,EAAE,OAAO,CAAC,CAAC;IAkDhC,gCAAgC,CACpC,aAAa,EAAE,MAAM,EACrB,OAAO,EAAE,iBAAiB,EAC1B,EAAE,CAAC,EAAE,WAAW,CAAC,CAAC,OAAO,EAAE,OAAO,CAAC,CAAC;IA2DhC,aAAa,CAAC,EAAE,CAAC,EAAE,WAAW,CAAC,CAAC,OAAO,CAAC,CAAC,GAAG,OAAO,CAAC,aAAa,EAAE,CAAC;IAUpE,WAAW,CAAC,EAAE,CAAC,EAAE,WAAW,CAAC,CAAC,OAAO,CAAC,CAAC,GAAG,OAAO,CAAC,YAAY,EAAE,CAAC;CAMxE"}
@@ -6,6 +6,6 @@ export type Database = IDBPDatabase<OntologyDB>;
6
6
  export declare function openDatabase(this: OntologyStore, dbName: string): Promise<IDBPDatabase<OntologyDB>>;
7
7
  /** load a OBO Graph JSON file into a database */
8
8
  export declare function loadOboGraphJson(this: OntologyStore, db: Database): Promise<void>;
9
- export declare function getTextIndexFields(this: OntologyStore): import("..").TextIndexFieldDefinition[];
9
+ export declare function getTextIndexFields(this: OntologyStore): import("./types").TextIndexFieldDefinition[];
10
10
  export declare function isDatabaseCurrent(this: OntologyStore, db: Database): Promise<boolean>;
11
11
  //# sourceMappingURL=indexeddb-storage.d.ts.map
@@ -1 +1 @@
1
- {"version":3,"file":"indexeddb-storage.d.ts","sourceRoot":"","sources":["../../../src/OntologyManager/OntologyStore/indexeddb-storage.ts"],"names":[],"mappings":"AAIA,OAAO,EACL,KAAK,YAAY,EAGlB,MAAM,qBAAqB,CAAA;AAK5B,OAAO,EACL,KAAK,UAAU,EAGhB,MAAM,oBAAoB,CAAA;AAG3B,OAAO,KAAK,aAAa,MAAM,GAAG,CAAA;AAKlC,MAAM,MAAM,QAAQ,GAAG,YAAY,CAAC,UAAU,CAAC,CAAA;AAE/C,+DAA+D;AAC/D,wBAAsB,YAAY,CAAC,IAAI,EAAE,aAAa,EAAE,MAAM,EAAE,MAAM,qCA+CrE;AAWD,iDAAiD;AACjD,wBAAsB,gBAAgB,CAAC,IAAI,EAAE,aAAa,EAAE,EAAE,EAAE,QAAQ,iBAgHvE;AAED,wBAAgB,kBAAkB,CAAC,IAAI,EAAE,aAAa,2CAKrD;AAED,wBAAsB,iBAAiB,CAAC,IAAI,EAAE,aAAa,EAAE,EAAE,EAAE,QAAQ,oBAYxE"}
1
+ {"version":3,"file":"indexeddb-storage.d.ts","sourceRoot":"","sources":["../../../src/OntologyManager/OntologyStore/indexeddb-storage.ts"],"names":[],"mappings":"AAIA,OAAO,EACL,KAAK,YAAY,EAGlB,MAAM,qBAAqB,CAAA;AAG5B,OAAO,EACL,KAAK,UAAU,EAGhB,MAAM,oBAAoB,CAAA;AAI3B,OAAO,KAAK,aAAa,MAAM,GAAG,CAAA;AAKlC,MAAM,MAAM,QAAQ,GAAG,YAAY,CAAC,UAAU,CAAC,CAAA;AAE/C,+DAA+D;AAC/D,wBAAsB,YAAY,CAAC,IAAI,EAAE,aAAa,EAAE,MAAM,EAAE,MAAM,qCA+CrE;AAWD,iDAAiD;AACjD,wBAAsB,gBAAgB,CAAC,IAAI,EAAE,aAAa,EAAE,EAAE,EAAE,QAAQ,iBAiHvE;AAED,wBAAgB,kBAAkB,CAAC,IAAI,EAAE,aAAa,gDAKrD;AAED,wBAAsB,iBAAiB,CAAC,IAAI,EAAE,aAAa,EAAE,EAAE,EAAE,QAAQ,oBAYxE"}
@@ -0,0 +1,18 @@
1
+ import type { OntologyDBNode } from './indexeddb-schema';
2
+ export type OntologyTerm = OntologyDBNode;
3
+ export type OntologyClass = OntologyTerm & {
4
+ type: 'CLASS';
5
+ };
6
+ export declare function isOntologyClass(term: OntologyTerm): term is OntologyClass;
7
+ export type OntologyProperty = OntologyTerm & {
8
+ type: 'PROPERTY';
9
+ };
10
+ export declare function isOntologyProperty(term: OntologyTerm): term is OntologyProperty;
11
+ export interface TextIndexFieldDefinition {
12
+ /** name to display in the UI for text taken from this field or fields */
13
+ displayName: string;
14
+ /** JSONPath of the field(s) */
15
+ jsonPath: string;
16
+ }
17
+ export declare const defaultTextIndexFields: TextIndexFieldDefinition[];
18
+ //# sourceMappingURL=types.d.ts.map
@@ -0,0 +1 @@
1
+ {"version":3,"file":"types.d.ts","sourceRoot":"","sources":["../../../src/OntologyManager/OntologyStore/types.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,cAAc,EAAE,MAAM,oBAAoB,CAAA;AAExD,MAAM,MAAM,YAAY,GAAG,cAAc,CAAA;AAEzC,MAAM,MAAM,aAAa,GAAG,YAAY,GAAG;IAAE,IAAI,EAAE,OAAO,CAAA;CAAE,CAAA;AAC5D,wBAAgB,eAAe,CAAC,IAAI,EAAE,YAAY,GAAG,IAAI,IAAI,aAAa,CAEzE;AAED,MAAM,MAAM,gBAAgB,GAAG,YAAY,GAAG;IAAE,IAAI,EAAE,UAAU,CAAA;CAAE,CAAA;AAClE,wBAAgB,kBAAkB,CAChC,IAAI,EAAE,YAAY,GACjB,IAAI,IAAI,gBAAgB,CAE1B;AAED,MAAM,WAAW,wBAAwB;IACvC,yEAAyE;IACzE,WAAW,EAAE,MAAM,CAAA;IACnB,+BAA+B;IAC/B,QAAQ,EAAE,MAAM,CAAA;CACjB;AACD,eAAO,MAAM,sBAAsB,EAAE,wBAAwB,EAI5D,CAAA"}
@@ -1 +1 @@
1
- {"version":3,"file":"featureContextMenuItems.d.ts","sourceRoot":"","sources":["../../../src/TabularEditor/HybridGrid/featureContextMenuItems.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,wBAAwB,CAAA;AAC/D,OAAO,KAAK,EAAE,QAAQ,EAAE,MAAM,kBAAkB,CAAA;AAOhD,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAA;AAUxD,OAAO,KAAK,EAAE,kBAAkB,EAAE,MAAM,eAAe,CAAA;AAGvD,wBAAgB,uBAAuB,CACrC,OAAO,EAAE,iBAAiB,GAAG,SAAS,EACtC,MAAM,EAAE;IAAE,YAAY,EAAE,MAAM,CAAC;IAAC,OAAO,EAAE,MAAM,CAAC;IAAC,KAAK,EAAE,MAAM,CAAC;IAAC,GAAG,EAAE,MAAM,CAAA;CAAE,EAC7E,aAAa,EAAE,CAAC,YAAY,EAAE,MAAM,KAAK,MAAM,EAC/C,eAAe,EAAE,iBAAiB,GAAG,SAAS,EAC9C,kBAAkB,EAAE,CAAC,CAAC,EAAE,iBAAiB,GAAG,SAAS,KAAK,IAAI,EAC9D,OAAO,EAAE,kBAAkB,EAC3B,aAAa,EAAE,aAAa,EAC5B,mBAAmB,EAAE,MAAM,EAAE,EAC7B,yBAAyB,EAAE,CAAC,KAAK,EAAE,MAAM,EAAE,KAAK,IAAI,cAkOrD"}
1
+ {"version":3,"file":"featureContextMenuItems.d.ts","sourceRoot":"","sources":["../../../src/TabularEditor/HybridGrid/featureContextMenuItems.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,wBAAwB,CAAA;AAC/D,OAAO,KAAK,EAAE,QAAQ,EAAE,MAAM,kBAAkB,CAAA;AAOhD,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAA;AAUxD,OAAO,KAAK,EAAE,kBAAkB,EAAE,MAAM,eAAe,CAAA;AAGvD,wBAAgB,uBAAuB,CACrC,OAAO,EAAE,iBAAiB,GAAG,SAAS,EACtC,MAAM,EAAE;IAAE,YAAY,EAAE,MAAM,CAAC;IAAC,OAAO,EAAE,MAAM,CAAC;IAAC,KAAK,EAAE,MAAM,CAAC;IAAC,GAAG,EAAE,MAAM,CAAA;CAAE,EAC7E,aAAa,EAAE,CAAC,YAAY,EAAE,MAAM,KAAK,MAAM,EAC/C,eAAe,EAAE,iBAAiB,GAAG,SAAS,EAC9C,kBAAkB,EAAE,CAAC,CAAC,EAAE,iBAAiB,GAAG,SAAS,KAAK,IAAI,EAC9D,OAAO,EAAE,kBAAkB,EAC3B,aAAa,EAAE,aAAa,EAC5B,mBAAmB,EAAE,MAAM,EAAE,EAC7B,yBAAyB,EAAE,CAAC,KAAK,EAAE,MAAM,EAAE,KAAK,IAAI,cAiOrD"}
@@ -1 +1 @@
1
- {"version":3,"file":"AddChildFeature.d.ts","sourceRoot":"","sources":["../../src/components/AddChildFeature.tsx"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,wBAAwB,CAAA;AAY/D,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,kBAAkB,CAAA;AAIrD,OAAO,KAAK,EAAE,kBAAkB,EAAE,MAAM,YAAY,CAAA;AAKpD,UAAU,oBAAoB;IAC5B,OAAO,EAAE,kBAAkB,CAAA;IAC3B,WAAW,IAAI,IAAI,CAAA;IACnB,aAAa,EAAE,iBAAiB,CAAA;IAChC,gBAAgB,EAAE,MAAM,CAAA;IACxB,aAAa,EAAE,aAAa,CAAA;CAC7B;AAED,wBAAgB,eAAe,CAAC,EAC9B,aAAa,EACb,WAAW,EACX,OAAO,EACP,gBAAgB,EAChB,aAAa,GACd,EAAE,oBAAoB,2CAsItB"}
1
+ {"version":3,"file":"AddChildFeature.d.ts","sourceRoot":"","sources":["../../src/components/AddChildFeature.tsx"],"names":[],"mappings":"AAEA,OAAO,KAAK,EACV,iBAAiB,EAElB,MAAM,wBAAwB,CAAA;AAY/B,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,kBAAkB,CAAA;AAIrD,OAAO,KAAK,EAAE,kBAAkB,EAAE,MAAM,YAAY,CAAA;AAKpD,UAAU,oBAAoB;IAC5B,OAAO,EAAE,kBAAkB,CAAA;IAC3B,WAAW,IAAI,IAAI,CAAA;IACnB,aAAa,EAAE,iBAAiB,CAAA;IAChC,gBAAgB,EAAE,MAAM,CAAA;IACxB,aAAa,EAAE,aAAa,CAAA;CAC7B;AAED,wBAAgB,eAAe,CAAC,EAC9B,aAAa,EACb,WAAW,EACX,OAAO,EACP,gBAAgB,EAChB,aAAa,GACd,EAAE,oBAAoB,2CA0ItB"}
@@ -0,0 +1,13 @@
1
+ import type { AnnotationFeature } from '@apollo-annotation/mst';
2
+ import type { ChangeManager } from '../ChangeManager';
3
+ import type { ApolloSessionModel } from '../session';
4
+ interface ColorFeatureProps {
5
+ session: ApolloSessionModel;
6
+ handleClose(): void;
7
+ sourceFeature: AnnotationFeature;
8
+ sourceAssemblyId: string;
9
+ changeManager: ChangeManager;
10
+ }
11
+ export declare function ColorFeature({ changeManager, handleClose, sourceAssemblyId, sourceFeature, }: ColorFeatureProps): import("react/jsx-runtime").JSX.Element;
12
+ export {};
13
+ //# sourceMappingURL=ColorFeature.d.ts.map
@@ -0,0 +1 @@
1
+ {"version":3,"file":"ColorFeature.d.ts","sourceRoot":"","sources":["../../src/components/ColorFeature.tsx"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,wBAAwB,CAAA;AAW/D,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,kBAAkB,CAAA;AACrD,OAAO,KAAK,EAAE,kBAAkB,EAAE,MAAM,YAAY,CAAA;AAcpD,UAAU,iBAAiB;IACzB,OAAO,EAAE,kBAAkB,CAAA;IAC3B,WAAW,IAAI,IAAI,CAAA;IACnB,aAAa,EAAE,iBAAiB,CAAA;IAChC,gBAAgB,EAAE,MAAM,CAAA;IACxB,aAAa,EAAE,aAAa,CAAA;CAC7B;AAED,wBAAgB,YAAY,CAAC,EAC3B,aAAa,EACb,WAAW,EACX,gBAAgB,EAChB,aAAa,GACd,EAAE,iBAAiB,2CA6HnB"}
@@ -1 +1 @@
1
- {"version":3,"file":"CreateApolloAnnotation.d.ts","sourceRoot":"","sources":["../../src/components/CreateApolloAnnotation.tsx"],"names":[],"mappings":"AAIA,OAAO,KAAK,EAAE,yBAAyB,EAAE,MAAM,wBAAwB,CAAA;AAMvE,OAAO,KAAK,EAAE,QAAQ,EAAE,MAAM,wCAAwC,CAAA;AACtE,OAAO,KAAK,EAAE,oBAAoB,EAAE,MAAM,oBAAoB,CAAA;AAwB9D,UAAU,2BAA2B;IACnC,OAAO,EAAE,oBAAoB,CAAA;IAC7B,WAAW,IAAI,IAAI,CAAA;IACnB,iBAAiB,EAAE,yBAAyB,CAAA;IAC5C,QAAQ,EAAE,QAAQ,CAAA;IAClB,QAAQ,EAAE,MAAM,CAAA;IAChB,MAAM,EAAE;QACN,KAAK,EAAE,MAAM,CAAA;QACb,GAAG,EAAE,MAAM,CAAA;KACZ,CAAA;CACF;AAuDD,wBAAgB,cAAc,CAAC,OAAO,EAAE,yBAAyB,UAUhE;AAED,wBAAgB,eAAe,CAAC,OAAO,EAAE,yBAAyB,UAUjE;AAED,wBAAgB,YAAY,CAAC,OAAO,EAAE,yBAAyB,UAiB9D;AAcD,wBAAgB,sBAAsB,CAAC,EACrC,iBAAiB,EACjB,QAAQ,EACR,WAAW,EACX,QAAQ,EACR,OAAO,EACP,MAAM,GACP,EAAE,2BAA2B,2CA6b7B"}
1
+ {"version":3,"file":"CreateApolloAnnotation.d.ts","sourceRoot":"","sources":["../../src/components/CreateApolloAnnotation.tsx"],"names":[],"mappings":"AAIA,OAAO,KAAK,EAAE,yBAAyB,EAAE,MAAM,wBAAwB,CAAA;AAMvE,OAAO,KAAK,EAAE,QAAQ,EAAE,MAAM,wCAAwC,CAAA;AAEtE,OAAO,KAAK,EAAE,oBAAoB,EAAE,MAAM,oBAAoB,CAAA;AAyB9D,UAAU,2BAA2B;IACnC,OAAO,EAAE,oBAAoB,CAAA;IAC7B,WAAW,IAAI,IAAI,CAAA;IACnB,iBAAiB,EAAE,yBAAyB,CAAA;IAC5C,QAAQ,EAAE,QAAQ,CAAA;IAClB,QAAQ,EAAE,MAAM,CAAA;IAChB,MAAM,EAAE;QACN,KAAK,EAAE,MAAM,CAAA;QACb,GAAG,EAAE,MAAM,CAAA;KACZ,CAAA;CACF;AAuDD,wBAAgB,cAAc,CAAC,OAAO,EAAE,yBAAyB,UAUhE;AAED,wBAAgB,eAAe,CAAC,OAAO,EAAE,yBAAyB,UAUjE;AAED,wBAAgB,YAAY,CAAC,OAAO,EAAE,yBAAyB,UAiB9D;AAcD,wBAAgB,sBAAsB,CAAC,EACrC,iBAAiB,EACjB,QAAQ,EACR,WAAW,EACX,QAAQ,EACR,OAAO,EACP,MAAM,GACP,EAAE,2BAA2B,2CAqd7B"}
@@ -1,8 +1,11 @@
1
+ import { type SvgIconProps } from '@mui/material';
1
2
  import type { ApolloSessionModel } from '../session';
2
3
  interface DownloadGFF3Props {
3
4
  session: ApolloSessionModel;
4
5
  handleClose(): void;
6
+ assembly: string;
5
7
  }
6
- export declare function DownloadGFF3({ handleClose, session }: DownloadGFF3Props): import("react/jsx-runtime").JSX.Element;
8
+ export declare function Export(props: SvgIconProps): import("react/jsx-runtime").JSX.Element;
9
+ export declare function DownloadGFF3({ handleClose, session, assembly: assemblyName, }: DownloadGFF3Props): import("react/jsx-runtime").JSX.Element | undefined;
7
10
  export {};
8
11
  //# sourceMappingURL=DownloadGFF3.d.ts.map
@@ -1 +1 @@
1
- {"version":3,"file":"DownloadGFF3.d.ts","sourceRoot":"","sources":["../../src/components/DownloadGFF3.tsx"],"names":[],"mappings":"AA+BA,OAAO,KAAK,EAAE,kBAAkB,EAAE,MAAM,YAAY,CAAA;AAKpD,UAAU,iBAAiB;IACzB,OAAO,EAAE,kBAAkB,CAAA;IAC3B,WAAW,IAAI,IAAI,CAAA;CACpB;AAED,wBAAgB,YAAY,CAAC,EAAE,WAAW,EAAE,OAAO,EAAE,EAAE,iBAAiB,2CAwMvE"}
1
+ {"version":3,"file":"DownloadGFF3.d.ts","sourceRoot":"","sources":["../../src/components/DownloadGFF3.tsx"],"names":[],"mappings":"AAOA,OAAO,EASL,KAAK,YAAY,EAClB,MAAM,eAAe,CAAA;AAStB,OAAO,KAAK,EAAE,kBAAkB,EAAE,MAAM,YAAY,CAAA;AAKpD,UAAU,iBAAiB;IACzB,OAAO,EAAE,kBAAkB,CAAA;IAC3B,WAAW,IAAI,IAAI,CAAA;IACnB,QAAQ,EAAE,MAAM,CAAA;CACjB;AAGD,wBAAgB,MAAM,CAAC,KAAK,EAAE,YAAY,2CAMzC;AAED,wBAAgB,YAAY,CAAC,EAC3B,WAAW,EACX,OAAO,EACP,QAAQ,EAAE,YAAY,GACvB,EAAE,iBAAiB,uDAqHnB"}
@@ -1 +1 @@
1
- {"version":3,"file":"DuplicateTranscript.d.ts","sourceRoot":"","sources":["../../src/components/DuplicateTranscript.tsx"],"names":[],"mappings":"AACA,OAAO,KAAK,EACV,iBAAiB,EAElB,MAAM,wBAAwB,CAAA;AAa/B,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,kBAAkB,CAAA;AACrD,OAAO,KAAK,EAAE,kBAAkB,EAAE,MAAM,YAAY,CAAA;AAIpD,UAAU,wBAAwB;IAChC,OAAO,EAAE,kBAAkB,CAAA;IAC3B,WAAW,IAAI,IAAI,CAAA;IACnB,aAAa,EAAE,iBAAiB,CAAA;IAChC,gBAAgB,EAAE,MAAM,CAAA;IACxB,aAAa,EAAE,aAAa,CAAA;IAC5B,eAAe,CAAC,EAAE,iBAAiB,CAAA;IACnC,kBAAkB,CAAC,OAAO,CAAC,EAAE,iBAAiB,GAAG,IAAI,CAAA;CACtD;AAED,wBAAgB,mBAAmB,CAAC,EAClC,aAAa,EACb,WAAW,EACX,OAAO,EACP,gBAAgB,EAChB,aAAa,EACb,kBAAkB,GACnB,EAAE,wBAAwB,2CA4F1B"}
1
+ {"version":3,"file":"DuplicateTranscript.d.ts","sourceRoot":"","sources":["../../src/components/DuplicateTranscript.tsx"],"names":[],"mappings":"AACA,OAAO,KAAK,EACV,iBAAiB,EAElB,MAAM,wBAAwB,CAAA;AAc/B,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,kBAAkB,CAAA;AACrD,OAAO,KAAK,EAAE,kBAAkB,EAAE,MAAM,YAAY,CAAA;AAKpD,UAAU,wBAAwB;IAChC,OAAO,EAAE,kBAAkB,CAAA;IAC3B,WAAW,IAAI,IAAI,CAAA;IACnB,aAAa,EAAE,iBAAiB,CAAA;IAChC,gBAAgB,EAAE,MAAM,CAAA;IACxB,aAAa,EAAE,aAAa,CAAA;IAC5B,eAAe,CAAC,EAAE,iBAAiB,CAAA;IACnC,kBAAkB,CAAC,OAAO,CAAC,EAAE,iBAAiB,GAAG,IAAI,CAAA;CACtD;AAED,wBAAgB,mBAAmB,CAAC,EAClC,aAAa,EACb,WAAW,EACX,OAAO,EACP,gBAAgB,EAChB,aAAa,EACb,kBAAkB,GACnB,EAAE,wBAAwB,2CAoG1B"}
@@ -2,7 +2,8 @@ import type { ApolloSessionModel } from '../session';
2
2
  interface ViewChangeLogProps {
3
3
  session: ApolloSessionModel;
4
4
  handleClose(): void;
5
+ assembly: string;
5
6
  }
6
- export declare function ViewChangeLog({ handleClose, session }: ViewChangeLogProps): import("react/jsx-runtime").JSX.Element;
7
+ export declare function ViewChangeLog({ handleClose, session, assembly: assemblyId, }: ViewChangeLogProps): import("react/jsx-runtime").JSX.Element;
7
8
  export {};
8
9
  //# sourceMappingURL=ViewChangeLog.d.ts.map
@@ -1 +1 @@
1
- {"version":3,"file":"ViewChangeLog.d.ts","sourceRoot":"","sources":["../../src/components/ViewChangeLog.tsx"],"names":[],"mappings":"AAgCA,OAAO,KAAK,EAAE,kBAAkB,EAAE,MAAM,YAAY,CAAA;AAMpD,UAAU,kBAAkB;IAC1B,OAAO,EAAE,kBAAkB,CAAA;IAC3B,WAAW,IAAI,IAAI,CAAA;CACpB;AAYD,wBAAgB,aAAa,CAAC,EAAE,WAAW,EAAE,OAAO,EAAE,EAAE,kBAAkB,2CA+IzE"}
1
+ {"version":3,"file":"ViewChangeLog.d.ts","sourceRoot":"","sources":["../../src/components/ViewChangeLog.tsx"],"names":[],"mappings":"AAyBA,OAAO,KAAK,EAAE,kBAAkB,EAAE,MAAM,YAAY,CAAA;AAIpD,UAAU,kBAAkB;IAC1B,OAAO,EAAE,kBAAkB,CAAA;IAC3B,WAAW,IAAI,IAAI,CAAA;IACnB,QAAQ,EAAE,MAAM,CAAA;CACjB;AAgDD,wBAAgB,aAAa,CAAC,EAC5B,WAAW,EACX,OAAO,EACP,QAAQ,EAAE,UAAU,GACrB,EAAE,kBAAkB,2CAuJpB"}
@@ -2,7 +2,8 @@ import type { ApolloSessionModel } from '../session';
2
2
  interface ViewCheckResultsProps {
3
3
  session: ApolloSessionModel;
4
4
  handleClose(): void;
5
+ assembly: string;
5
6
  }
6
- export declare function ViewCheckResults({ handleClose, session, }: ViewCheckResultsProps): import("react/jsx-runtime").JSX.Element;
7
+ export declare function ViewCheckResults({ handleClose, session, assembly: assemblyName, }: ViewCheckResultsProps): import("react/jsx-runtime").JSX.Element;
7
8
  export {};
8
9
  //# sourceMappingURL=ViewCheckResults.d.ts.map
@@ -1 +1 @@
1
- {"version":3,"file":"ViewCheckResults.d.ts","sourceRoot":"","sources":["../../src/components/ViewCheckResults.tsx"],"names":[],"mappings":"AAyBA,OAAO,KAAK,EAAE,kBAAkB,EAAE,MAAM,YAAY,CAAA;AAMpD,UAAU,qBAAqB;IAC7B,OAAO,EAAE,kBAAkB,CAAA;IAC3B,WAAW,IAAI,IAAI,CAAA;CACpB;AAED,wBAAgB,gBAAgB,CAAC,EAC/B,WAAW,EACX,OAAO,GACR,EAAE,qBAAqB,2CAkHvB"}
1
+ {"version":3,"file":"ViewCheckResults.d.ts","sourceRoot":"","sources":["../../src/components/ViewCheckResults.tsx"],"names":[],"mappings":"AAaA,OAAO,KAAK,EAAE,kBAAkB,EAAE,MAAM,YAAY,CAAA;AAIpD,UAAU,qBAAqB;IAC7B,OAAO,EAAE,kBAAkB,CAAA;IAC3B,WAAW,IAAI,IAAI,CAAA;IACnB,QAAQ,EAAE,MAAM,CAAA;CACjB;AAED,wBAAgB,gBAAgB,CAAC,EAC/B,WAAW,EACX,OAAO,EACP,QAAQ,EAAE,YAAY,GACvB,EAAE,qBAAqB,2CAoEvB"}
@@ -2,6 +2,7 @@ export * from './AddAssembly';
2
2
  export * from './AddAssemblyAliases';
3
3
  export * from './AddChildFeature';
4
4
  export * from './AddFeature';
5
+ export * from './ColorFeature';
5
6
  export * from './CopyFeature';
6
7
  export * from './DeleteAssembly';
7
8
  export * from './DeleteFeature';
@@ -12,7 +13,6 @@ export * from './ManageChecks';
12
13
  export * from './ManageUsers';
13
14
  export * from './MergeExons';
14
15
  export * from './MergeTranscripts';
15
- export * from './OpenLocalFile';
16
16
  export * from './ViewChangeLog';
17
17
  export * from './AddRefSeqAliases';
18
18
  export * from './ViewCheckResults';
@@ -1 +1 @@
1
- {"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../src/components/index.ts"],"names":[],"mappings":"AAAA,cAAc,eAAe,CAAA;AAC7B,cAAc,sBAAsB,CAAA;AACpC,cAAc,mBAAmB,CAAA;AACjC,cAAc,cAAc,CAAA;AAC5B,cAAc,eAAe,CAAA;AAC7B,cAAc,kBAAkB,CAAA;AAChC,cAAc,iBAAiB,CAAA;AAC/B,cAAc,gBAAgB,CAAA;AAC9B,cAAc,kBAAkB,CAAA;AAChC,cAAc,UAAU,CAAA;AACxB,cAAc,gBAAgB,CAAA;AAC9B,cAAc,eAAe,CAAA;AAC7B,cAAc,cAAc,CAAA;AAC5B,cAAc,oBAAoB,CAAA;AAClC,cAAc,iBAAiB,CAAA;AAC/B,cAAc,iBAAiB,CAAA;AAC/B,cAAc,oBAAoB,CAAA;AAClC,cAAc,oBAAoB,CAAA;AAClC,cAAc,aAAa,CAAA;AAC3B,cAAc,uBAAuB,CAAA"}
1
+ {"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../src/components/index.ts"],"names":[],"mappings":"AAAA,cAAc,eAAe,CAAA;AAC7B,cAAc,sBAAsB,CAAA;AACpC,cAAc,mBAAmB,CAAA;AACjC,cAAc,cAAc,CAAA;AAC5B,cAAc,gBAAgB,CAAA;AAC9B,cAAc,eAAe,CAAA;AAC7B,cAAc,kBAAkB,CAAA;AAChC,cAAc,iBAAiB,CAAA;AAC/B,cAAc,gBAAgB,CAAA;AAC9B,cAAc,kBAAkB,CAAA;AAChC,cAAc,UAAU,CAAA;AACxB,cAAc,gBAAgB,CAAA;AAC9B,cAAc,eAAe,CAAA;AAC7B,cAAc,cAAc,CAAA;AAC5B,cAAc,oBAAoB,CAAA;AAClC,cAAc,iBAAiB,CAAA;AAC/B,cAAc,oBAAoB,CAAA;AAClC,cAAc,oBAAoB,CAAA;AAClC,cAAc,aAAa,CAAA;AAC3B,cAAc,uBAAuB,CAAA"}
@@ -0,0 +1,4 @@
1
+ import { ConfigurationSchema } from '@jbrowse/core/configuration';
2
+ declare const ApolloPluginConfigurationSchema: ReturnType<typeof ConfigurationSchema>;
3
+ export default ApolloPluginConfigurationSchema;
4
+ //# sourceMappingURL=config.d.ts.map
@@ -0,0 +1 @@
1
+ {"version":3,"file":"config.d.ts","sourceRoot":"","sources":["../src/config.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,mBAAmB,EAAE,MAAM,6BAA6B,CAAA;AAKjE,QAAA,MAAM,+BAA+B,EAAE,UAAU,CAAC,OAAO,mBAAmB,CAoCzE,CAAA;AAEH,eAAe,+BAA+B,CAAA"}
@@ -1 +1 @@
1
- {"version":3,"file":"annotationFromJBrowseFeature.d.ts","sourceRoot":"","sources":["../../src/extensions/annotationFromJBrowseFeature.ts"],"names":[],"mappings":"AAKA,OAAO,KAAK,EAAE,yBAAyB,EAAE,MAAM,wBAAwB,CAAA;AAIvE,OAAO,KAAK,EAAE,oBAAoB,EAAE,MAAM,qCAAqC,CAAA;AAO/E,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,kCAAkC,CAAA;AAuC/D,wBAAgB,iCAAiC,CAC/C,OAAO,EAAE,OAAO,EAChB,QAAQ,EAAE,MAAM,GACf,yBAAyB,CAE3B;AAyBD,wBAAgB,4BAA4B,CAC1C,gBAAgB,EAAE,oBAAoB,wBA6FvC"}
1
+ {"version":3,"file":"annotationFromJBrowseFeature.d.ts","sourceRoot":"","sources":["../../src/extensions/annotationFromJBrowseFeature.ts"],"names":[],"mappings":"AAKA,OAAO,KAAK,EAAE,yBAAyB,EAAE,MAAM,wBAAwB,CAAA;AAGvE,OAAO,KAAK,EAAE,oBAAoB,EAAE,MAAM,qCAAqC,CAAA;AAG/E,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,kCAAkC,CAAA;AAyC/D,wBAAgB,iCAAiC,CAC/C,OAAO,EAAE,OAAO,EAChB,QAAQ,EAAE,MAAM,GACf,yBAAyB,CAE3B;AA+DD,wBAAgB,4BAA4B,CAC1C,gBAAgB,EAAE,oBAAoB,wBAsFvC"}
@@ -1 +1 @@
1
- {"version":3,"file":"annotationFromPileup.d.ts","sourceRoot":"","sources":["../../src/extensions/annotationFromPileup.ts"],"names":[],"mappings":"AAOA,OAAO,KAAK,EAEV,oBAAoB,EACrB,MAAM,qCAAqC,CAAA;AAwB5C,wBAAgB,oBAAoB,CAAC,gBAAgB,EAAE,oBAAoB,wBAwL1E"}
1
+ {"version":3,"file":"annotationFromPileup.d.ts","sourceRoot":"","sources":["../../src/extensions/annotationFromPileup.ts"],"names":[],"mappings":"AAMA,OAAO,KAAK,EAEV,oBAAoB,EACrB,MAAM,qCAAqC,CAAA;AA2B5C,wBAAgB,oBAAoB,CAAC,gBAAgB,EAAE,oBAAoB,wBAsL1E"}
@@ -0,0 +1,11 @@
1
+ import Plugin from '@jbrowse/core/Plugin';
2
+ import type PluginManager from '@jbrowse/core/PluginManager';
3
+ import { ConfigurationSchema } from '@jbrowse/core/configuration';
4
+ export default class ApolloPlugin extends Plugin {
5
+ name: string;
6
+ version: string;
7
+ configurationSchema: ReturnType<typeof ConfigurationSchema>;
8
+ install(pluginManager: PluginManager): void;
9
+ configure(pluginManager: PluginManager): void;
10
+ }
11
+ //# sourceMappingURL=index.d.ts.map
@@ -0,0 +1 @@
1
+ {"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAcA,OAAO,MAAM,MAAM,sBAAsB,CAAA;AACzC,OAAO,KAAK,aAAa,MAAM,6BAA6B,CAAA;AAE5D,OAAO,EAAE,mBAAmB,EAAE,MAAM,6BAA6B,CAAA;AA0GjE,MAAM,CAAC,OAAO,OAAO,YAAa,SAAQ,MAAM;IAC9C,IAAI,SAAiB;IACrB,OAAO,SAAU;IACjB,mBAAmB,EAAE,UAAU,CAAC,OAAO,mBAAmB,CAAC,CAC1B;IAEjC,OAAO,CAAC,aAAa,EAAE,aAAa;IA8TpC,SAAS,CAAC,aAAa,EAAE,aAAa;CAiBvC"}