sequenceserver 3.1.1 → 3.1.3
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/lib/sequenceserver/api_errors.rb +24 -0
- data/lib/sequenceserver/blast/tasks.rb +1 -1
- data/lib/sequenceserver/blast.rb +6 -0
- data/lib/sequenceserver/database.rb +13 -0
- data/lib/sequenceserver/routes.rb +1 -1
- data/lib/sequenceserver/sequence.rb +1 -2
- data/lib/sequenceserver/version.rb +1 -1
- data/lib/sequenceserver.rb +1 -1
- data/public/css/app.min.css +1 -1
- data/public/css/sequenceserver.css +0 -18
- data/public/css/sequenceserver.min.css +2 -2
- data/public/js/alignment_exporter.js +16 -28
- data/public/js/cloud_share_modal.js +42 -42
- data/public/js/form.js +12 -10
- data/public/js/grapher.js +4 -4
- data/public/js/hit.js +3 -3
- data/public/js/hits.js +276 -0
- data/public/js/jquery_world.js +1 -1
- data/public/js/mailto.js +1 -3
- data/public/js/null_plugins/report_plugins.js +1 -0
- data/public/js/options.js +2 -6
- data/public/js/query.js +1 -1
- data/public/js/report.js +68 -252
- data/public/js/report_root.js +7 -5
- data/public/js/search.js +28 -11
- data/public/js/sequence.js +158 -158
- data/public/js/sequence_modal.js +28 -36
- data/public/js/sidebar.js +7 -6
- data/public/js/tests/alignment_exporter.spec.js +38 -0
- data/public/js/tests/cloud_share_modal.spec.js +75 -0
- data/public/js/tests/report.spec.js +37 -15
- data/public/packages/jquery-ui@1.13.3.js +19070 -0
- data/public/sequenceserver-report.min.js +3 -2481
- data/public/sequenceserver-report.min.js.LICENSE.txt +300 -0
- data/public/sequenceserver-report.min.js.map +1 -0
- data/public/sequenceserver-search.min.js +3 -2382
- data/public/sequenceserver-search.min.js.LICENSE.txt +292 -0
- data/public/sequenceserver-search.min.js.map +1 -0
- data/views/layout.erb +3 -7
- data/views/search.erb +1 -1
- data/views/search_layout.erb +1 -1
- metadata +11 -5
- data/public/config.js +0 -147
- data/public/packages/jquery-ui@1.11.4.js +0 -16624
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/*! jQuery UI - v1.13.3 - 2024-04-26
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* Includes: widget.js, position.js, data.js, disable-selection.js, effect.js, effects/effect-blind.js, effects/effect-bounce.js, effects/effect-clip.js, effects/effect-drop.js, effects/effect-explode.js, effects/effect-fade.js, effects/effect-fold.js, effects/effect-highlight.js, effects/effect-puff.js, effects/effect-pulsate.js, effects/effect-scale.js, effects/effect-shake.js, effects/effect-size.js, effects/effect-slide.js, effects/effect-transfer.js, focusable.js, form-reset-mixin.js, jquery-patch.js, keycode.js, labels.js, scroll-parent.js, tabbable.js, unique-id.js, widgets/accordion.js, widgets/autocomplete.js, widgets/button.js, widgets/checkboxradio.js, widgets/controlgroup.js, widgets/datepicker.js, widgets/dialog.js, widgets/draggable.js, widgets/droppable.js, widgets/menu.js, widgets/mouse.js, widgets/progressbar.js, widgets/resizable.js, widgets/selectable.js, widgets/selectmenu.js, widgets/slider.js, widgets/sortable.js, widgets/spinner.js, widgets/tabs.js, widgets/tooltip.js
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