ro-crate 0.4.0

Sign up to get free protection for your applications and to get access to all the features.
Files changed (1179) hide show
  1. checksums.yaml +7 -0
  2. data/.github/workflows/docs.yml +25 -0
  3. data/.github/workflows/tests.yml +16 -0
  4. data/.gitignore +50 -0
  5. data/.ruby-version +1 -0
  6. data/Gemfile +3 -0
  7. data/Gemfile.lock +48 -0
  8. data/LICENSE +21 -0
  9. data/README.md +79 -0
  10. data/Rakefile +30 -0
  11. data/lib/ro_crate/json_ld_hash.rb +41 -0
  12. data/lib/ro_crate/model/contact_point.rb +13 -0
  13. data/lib/ro_crate/model/contextual_entity.rb +41 -0
  14. data/lib/ro_crate/model/crate.rb +211 -0
  15. data/lib/ro_crate/model/data_entity.rb +42 -0
  16. data/lib/ro_crate/model/directory.rb +60 -0
  17. data/lib/ro_crate/model/entity.rb +216 -0
  18. data/lib/ro_crate/model/entry.rb +57 -0
  19. data/lib/ro_crate/model/file.rb +76 -0
  20. data/lib/ro_crate/model/metadata.rb +38 -0
  21. data/lib/ro_crate/model/organization.rb +13 -0
  22. data/lib/ro_crate/model/person.rb +13 -0
  23. data/lib/ro_crate/model/preview.rb +43 -0
  24. data/lib/ro_crate/model/remote_entry.rb +46 -0
  25. data/lib/ro_crate/reader.rb +213 -0
  26. data/lib/ro_crate/ro-crate-preview.html.erb +55 -0
  27. data/lib/ro_crate/writer.rb +48 -0
  28. data/lib/ro_crate_ruby.rb +24 -0
  29. data/ro_crate.gemspec +18 -0
  30. data/test/crate_test.rb +201 -0
  31. data/test/directory_test.rb +45 -0
  32. data/test/entity_test.rb +73 -0
  33. data/test/fixtures/crate-spec1.1/file with spaces.txt +1 -0
  34. data/test/fixtures/crate-spec1.1/ro-crate-metadata.json +35 -0
  35. data/test/fixtures/data.csv +2 -0
  36. data/test/fixtures/directory.zip +0 -0
  37. data/test/fixtures/directory/data/binary.jpg +0 -0
  38. data/test/fixtures/directory/data/info.txt +1 -0
  39. data/test/fixtures/directory/data/nested.txt +1 -0
  40. data/test/fixtures/directory/info.txt +1 -0
  41. data/test/fixtures/directory/root.txt +1 -0
  42. data/test/fixtures/directory_crate/fish/data/binary.jpg +0 -0
  43. data/test/fixtures/directory_crate/fish/data/info.txt +1 -0
  44. data/test/fixtures/directory_crate/fish/data/nested.txt +1 -0
  45. data/test/fixtures/directory_crate/fish/info.txt +1 -0
  46. data/test/fixtures/directory_crate/fish/root.txt +1 -0
  47. data/test/fixtures/directory_crate/ro-crate-metadata.jsonld +25 -0
  48. data/test/fixtures/file with spaces.txt +1 -0
  49. data/test/fixtures/info.txt +1 -0
  50. data/test/fixtures/spaces/file with spaces.txt +1 -0
  51. data/test/fixtures/spaces/ro-crate-metadata.jsonld +25 -0
  52. data/test/fixtures/workflow-0.2.0.zip +0 -0
  53. data/test/fixtures/workflow-0.2.0/Dockerfile +1 -0
  54. data/test/fixtures/workflow-0.2.0/README.md +36 -0
  55. data/test/fixtures/workflow-0.2.0/ro-crate-metadata.jsonld +282 -0
  56. data/test/fixtures/workflow-0.2.0/test/test.sh +41 -0
  57. data/test/fixtures/workflow-0.2.0/tools/RetroPath2.cwl +94 -0
  58. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Aggregate (#936)/Column Filter (#882)/settings.xml +82 -0
  59. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Aggregate (#936)/GroupBy (#880)/settings.xml +129 -0
  60. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Aggregate (#936)/GroupBy (#884)/settings.xml +129 -0
  61. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Aggregate (#936)/Ungroup (#878)/settings.xml +90 -0
  62. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Aggregate (#936)/Ungroup (#883)/settings.xml +90 -0
  63. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Aggregate (#936)/workflow.knime +201 -0
  64. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Aggregate (#940)/Column Filter (#882)/settings.xml +82 -0
  65. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Aggregate (#940)/GroupBy (#880)/settings.xml +129 -0
  66. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Aggregate (#940)/GroupBy (#884)/settings.xml +129 -0
  67. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Aggregate (#940)/Ungroup (#878)/settings.xml +90 -0
  68. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Aggregate (#940)/Ungroup (#883)/settings.xml +90 -0
  69. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Aggregate (#940)/workflow.knime +201 -0
  70. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Cell Replacer (#933)/settings.xml +86 -0
  71. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Column Filter (#925)/settings.xml +82 -0
  72. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Column Filter (#928)/settings.xml +80 -0
  73. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Column Filter (#929)/settings.xml +87 -0
  74. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Column Filter (#950)/settings.xml +82 -0
  75. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Column Rename (#884)/settings.xml +57 -0
  76. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Column Rename (#892)/settings.xml +57 -0
  77. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Column Rename (#926)/settings.xml +62 -0
  78. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Column Rename (#941)/settings.xml +57 -0
  79. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Column Rename (#949)/settings.xml +62 -0
  80. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Column Rename (#952)/settings.xml +57 -0
  81. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Column Resorter (#939)/settings.xml +67 -0
  82. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Column Resorter (#946)/settings.xml +67 -0
  83. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Create Collection Column (#935)/settings.xml +102 -0
  84. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Joiner (#886)/settings.xml +85 -0
  85. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Joiner (#919)/settings.xml +88 -0
  86. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Joiner (#921)/settings.xml +93 -0
  87. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Joiner (#923)/settings.xml +91 -0
  88. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Joiner (#948)/settings.xml +88 -0
  89. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Joiner (#951)/settings.xml +88 -0
  90. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Missing Value (#932)/settings.xml +94 -0
  91. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Reaction SMI (#877)/Column Combiner (#874)/settings.xml +83 -0
  92. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Reaction SMI (#877)/Column Filter (#875)/settings.xml +79 -0
  93. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Reaction SMI (#877)/Column Filter (#876)/settings.xml +80 -0
  94. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Reaction SMI (#877)/workflow.knime +157 -0
  95. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Table Creator (#934)/settings.xml +92 -0
  96. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Ungroup (#924)/settings.xml +90 -0
  97. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/Ungroup (#947)/settings.xml +90 -0
  98. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/WrappedNode Input (#920)/settings.xml +118 -0
  99. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/WrappedNode Output (#917)/settings.xml +77 -0
  100. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/settings.xml +63 -0
  101. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/BUILD (#936)/workflow.knime +764 -0
  102. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Chunk Loop Start (#780)/settings.xml +90 -0
  103. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Compute over (#72)/Empty Table Creator (#68)/settings.xml +71 -0
  104. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Compute over (#72)/Generic Loop Start (#55)/settings.xml +68 -0
  105. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Compute over (#72)/How many rea (#72)/Column Rename (#72)/settings.xml +57 -0
  106. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Compute over (#72)/How many rea (#72)/Database Connection Table Reader (#53)/settings.xml +55 -0
  107. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Compute over (#72)/How many rea (#72)/Database Table Selector (#71)/settings.xml +66 -0
  108. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Compute over (#72)/How many rea (#72)/workflow.knime +183 -0
  109. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Compute over (#72)/How many rea (#75)/Column Rename (#70)/settings.xml +57 -0
  110. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Compute over (#72)/How many rea (#75)/Database Connection Table Reader (#52)/settings.xml +55 -0
  111. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Compute over (#72)/How many rea (#75)/Database Table Selector (#67)/settings.xml +66 -0
  112. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Compute over (#72)/How many rea (#75)/workflow.knime +170 -0
  113. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Compute over (#72)/Stop loop_ (#81)/Joiner (#78)/settings.xml +69 -0
  114. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Compute over (#72)/Stop loop_ (#81)/Rule Engine Variable (#79)/settings.xml +61 -0
  115. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Compute over (#72)/Stop loop_ (#81)/Table Row to Variable (#80)/settings.xml +93 -0
  116. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Compute over (#72)/Stop loop_ (#81)/workflow.knime +170 -0
  117. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Compute over (#72)/Update firea (#73)/Database SQL Executor (#39)/settings.xml +51 -0
  118. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Compute over (#72)/Update firea (#73)/workflow.knime +126 -0
  119. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Compute over (#72)/Update reach (#74)/Database SQL Executor (#66)/settings.xml +51 -0
  120. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Compute over (#72)/Update reach (#74)/workflow.knime +126 -0
  121. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Compute over (#72)/Variable Condition Loop End (#56)/settings.xml +61 -0
  122. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Compute over (#72)/workflow.knime +369 -0
  123. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/All involved (#777)/Concatenate (#744)/settings.xml +55 -0
  124. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/All involved (#777)/GroupBy (#745)/settings.xml +130 -0
  125. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/All involved (#777)/workflow.knime +148 -0
  126. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/Column Filter (#723)/settings.xml +80 -0
  127. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/Column Filter (#779)/settings.xml +81 -0
  128. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/Column Filter (#780)/settings.xml +80 -0
  129. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/GroupBy (#771)/settings.xml +165 -0
  130. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/Parse reacti (#773)/Column Filter (#713)/settings.xml +80 -0
  131. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/Parse reacti (#773)/Column Filter (#714)/settings.xml +80 -0
  132. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/Parse reacti (#773)/Column Rename (#715)/settings.xml +62 -0
  133. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/Parse reacti (#773)/Column Rename (#733)/settings.xml +57 -0
  134. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/Parse reacti (#773)/Column Rename (#734)/settings.xml +57 -0
  135. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/Parse reacti (#773)/Ungroup (#758)/settings.xml +90 -0
  136. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/Parse reacti (#773)/Ungroup (#759)/settings.xml +90 -0
  137. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/Parse reacti (#773)/workflow.knime +258 -0
  138. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/Prepare Comp (#778)/Column Rename (#761)/settings.xml +62 -0
  139. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/Prepare Comp (#778)/Constant Value Column (#743)/settings.xml +55 -0
  140. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/Prepare Comp (#778)/Constant Value Column (#762)/settings.xml +55 -0
  141. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/Prepare Comp (#778)/Constant Value Column (#763)/settings.xml +55 -0
  142. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/Prepare Comp (#778)/workflow.knime +179 -0
  143. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/Prepare HasL (#776)/Column Filter (#757)/settings.xml +78 -0
  144. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/Prepare HasL (#776)/Column Rename (#759)/settings.xml +62 -0
  145. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/Prepare HasL (#776)/workflow.knime +135 -0
  146. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/Prepare HasR (#775)/Column Filter (#757)/settings.xml +78 -0
  147. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/Prepare HasR (#775)/Column Rename (#733)/settings.xml +62 -0
  148. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/Prepare HasR (#775)/workflow.knime +135 -0
  149. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/Prepare Reac (#772)/Column Rename (#725)/settings.xml +57 -0
  150. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/Prepare Reac (#772)/Constant Value Column (#724)/settings.xml +55 -0
  151. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/Prepare Reac (#772)/workflow.knime +135 -0
  152. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/Prepare Reac (#781)/Column Rename (#725)/settings.xml +62 -0
  153. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/Prepare Reac (#781)/Ungroup (#726)/settings.xml +90 -0
  154. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/Prepare Reac (#781)/workflow.knime +135 -0
  155. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Data pre_pro (#828)/workflow.knime +439 -0
  156. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Initialize D (#1052)/Create Temp Dir (#964)/settings.xml +72 -0
  157. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Initialize D (#1052)/SQLite Connector (#8)/settings.xml +75 -0
  158. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Initialize D (#1052)/workflow.knime +108 -0
  159. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Populate DB (#40)/Database Writer (#10)/settings.xml +70 -0
  160. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Populate DB (#40)/Database Writer (#11)/settings.xml +68 -0
  161. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Populate DB (#40)/Database Writer (#12)/settings.xml +68 -0
  162. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Populate DB (#40)/Database Writer (#15)/settings.xml +68 -0
  163. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Populate DB (#40)/Database Writer (#9)/settings.xml +68 -0
  164. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Populate DB (#40)/Merge Variables (#13)/settings.xml +49 -0
  165. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Populate DB (#40)/Merge Variables (#14)/settings.xml +49 -0
  166. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Populate DB (#40)/workflow.knime +334 -0
  167. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Prepare Sink (#754)/Column Filter (#684)/settings.xml +91 -0
  168. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Prepare Sink (#754)/Column Filter (#750)/settings.xml +77 -0
  169. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Prepare Sink (#754)/Column Rename (#748)/settings.xml +57 -0
  170. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Prepare Sink (#754)/GroupBy (#745)/settings.xml +129 -0
  171. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Prepare Sink (#754)/Rule_based Row Filter (#749)/settings.xml +67 -0
  172. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Prepare Sink (#754)/workflow.knime +201 -0
  173. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Set initial (#41)/Database Drop Table (#832)/settings.xml +65 -0
  174. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Set initial (#41)/Database SQL Executor (#833)/settings.xml +51 -0
  175. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Set initial (#41)/Database Writer (#9)/settings.xml +67 -0
  176. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/Set initial (#41)/workflow.knime +222 -0
  177. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Compute over (#1055)/workflow.knime +332 -0
  178. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Empty Table Switch (#1062)/settings.xml +53 -0
  179. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/End IF (#1064)/settings.xml +53 -0
  180. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Extract resu (#1059)/Constant Value Column (#1058)/settings.xml +61 -0
  181. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Extract resu (#1059)/Constant Value Column (#1059)/settings.xml +61 -0
  182. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Extract resu (#1059)/Reference Row Splitter (#975)/settings.xml +70 -0
  183. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Extract resu (#1059)/workflow.knime +207 -0
  184. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get Source i (#771)/Column Filter (#684)/settings.xml +81 -0
  185. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get Source i (#771)/Ungroup (#749)/settings.xml +90 -0
  186. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get Source i (#771)/workflow.knime +135 -0
  187. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/CASE Switch Variable _End_ (#1018)/settings.xml +55 -0
  188. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/CASE Switch Variable _End_ (#1020)/settings.xml +55 -0
  189. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/CASE Switch Variable _End_ (#1022)/settings.xml +55 -0
  190. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/CASE Switch Variable _End_ (#1025)/settings.xml +55 -0
  191. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/CASE Switch Variable _End_ (#1036)/settings.xml +55 -0
  192. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/CASE Switch Variable _Start_ (#1017)/settings.xml +68 -0
  193. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/CASE Switch Variable _Start_ (#1019)/settings.xml +74 -0
  194. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/CASE Switch Variable _Start_ (#1021)/settings.xml +74 -0
  195. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/CASE Switch Variable _Start_ (#1024)/settings.xml +74 -0
  196. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/CASE Switch Variable _Start_ (#1035)/settings.xml +68 -0
  197. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Column Rename (#988)/settings.xml +57 -0
  198. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Database Connection Table Reader (#986)/settings.xml +55 -0
  199. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Database SQL Executor (#1005)/settings.xml +51 -0
  200. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Database SQL Executor (#1009)/settings.xml +51 -0
  201. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Database SQL Executor (#1014)/settings.xml +51 -0
  202. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Database SQL Executor (#1015)/settings.xml +51 -0
  203. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Database SQL Executor (#1023)/settings.xml +51 -0
  204. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Database SQL Executor (#994)/settings.xml +51 -0
  205. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Database SQL Executor (#995)/settings.xml +51 -0
  206. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Database Table Selector (#987)/settings.xml +66 -0
  207. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Database Writer (#15)/settings.xml +67 -0
  208. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Database Writer (#990)/settings.xml +69 -0
  209. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Merge Variables (#989)/settings.xml +49 -0
  210. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1027)/Database SQL Executor (#1027)/settings.xml +51 -0
  211. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1027)/Database SQL Executor (#1028)/settings.xml +51 -0
  212. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1027)/Database SQL Executor (#1040)/settings.xml +51 -0
  213. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1027)/How many tra (#1048)/Column Rename (#1043)/settings.xml +57 -0
  214. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1027)/How many tra (#1048)/Database Connection Table Reader (#53)/settings.xml +55 -0
  215. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1027)/How many tra (#1048)/Database Table Selector (#71)/settings.xml +66 -0
  216. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1027)/How many tra (#1048)/workflow.knime +170 -0
  217. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1027)/How many tra (#1049)/Column Rename (#1047)/settings.xml +57 -0
  218. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1027)/How many tra (#1049)/Database Connection Table Reader (#1045)/settings.xml +55 -0
  219. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1027)/How many tra (#1049)/Database Table Selector (#1046)/settings.xml +66 -0
  220. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1027)/How many tra (#1049)/workflow.knime +152 -0
  221. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1027)/Math Formula (#1036)/settings.xml +54 -0
  222. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1027)/Recursive Loop End (#1037)/settings.xml +91 -0
  223. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1027)/Recursive Loop Start (#1038)/settings.xml +68 -0
  224. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1027)/Stop loop_ (#1050)/Joiner (#78)/settings.xml +69 -0
  225. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1027)/Stop loop_ (#1050)/Rule Engine Variable (#79)/settings.xml +61 -0
  226. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1027)/Stop loop_ (#1050)/Table Row to Variable (#80)/settings.xml +93 -0
  227. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1027)/Stop loop_ (#1050)/workflow.knime +152 -0
  228. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1027)/Table Creator (#984)/settings.xml +80 -0
  229. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1027)/Table Row to Variable (#1035)/settings.xml +95 -0
  230. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1027)/Update Iter (#1051)/CASE Switch Variable _End_ (#1034)/settings.xml +55 -0
  231. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1027)/Update Iter (#1051)/CASE Switch Variable _Start_ (#1032)/settings.xml +74 -0
  232. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1027)/Update Iter (#1051)/Database SQL Executor (#1031)/settings.xml +51 -0
  233. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1027)/Update Iter (#1051)/Math Formula (#1044)/settings.xml +54 -0
  234. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1027)/Update Iter (#1051)/Table Row to Variable (#1033)/settings.xml +107 -0
  235. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1027)/Update Iter (#1051)/workflow.knime +215 -0
  236. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1027)/workflow.knime +470 -0
  237. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1030)/Database SQL Executor (#1027)/settings.xml +51 -0
  238. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1030)/Database SQL Executor (#1028)/settings.xml +51 -0
  239. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1030)/Database SQL Executor (#1040)/settings.xml +51 -0
  240. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1030)/How many tra (#1048)/Column Rename (#1043)/settings.xml +57 -0
  241. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1030)/How many tra (#1048)/Database Connection Table Reader (#53)/settings.xml +55 -0
  242. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1030)/How many tra (#1048)/Database Table Selector (#71)/settings.xml +66 -0
  243. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1030)/How many tra (#1048)/workflow.knime +170 -0
  244. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1030)/How many tra (#1049)/Column Rename (#1047)/settings.xml +57 -0
  245. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1030)/How many tra (#1049)/Database Connection Table Reader (#1045)/settings.xml +55 -0
  246. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1030)/How many tra (#1049)/Database Table Selector (#1046)/settings.xml +66 -0
  247. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1030)/How many tra (#1049)/workflow.knime +152 -0
  248. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1030)/Math Formula (#1036)/settings.xml +54 -0
  249. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1030)/Recursive Loop End (#1037)/settings.xml +91 -0
  250. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1030)/Recursive Loop Start (#1038)/settings.xml +68 -0
  251. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1030)/Stop loop_ (#1050)/Joiner (#78)/settings.xml +69 -0
  252. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1030)/Stop loop_ (#1050)/Rule Engine Variable (#79)/settings.xml +61 -0
  253. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1030)/Stop loop_ (#1050)/Table Row to Variable (#80)/settings.xml +93 -0
  254. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1030)/Stop loop_ (#1050)/workflow.knime +152 -0
  255. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1030)/Table Creator (#984)/settings.xml +80 -0
  256. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1030)/Table Row to Variable (#1035)/settings.xml +95 -0
  257. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1030)/Update Iter (#1051)/CASE Switch Variable _End_ (#1034)/settings.xml +55 -0
  258. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1030)/Update Iter (#1051)/CASE Switch Variable _Start_ (#1032)/settings.xml +74 -0
  259. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1030)/Update Iter (#1051)/Database SQL Executor (#1031)/settings.xml +51 -0
  260. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1030)/Update Iter (#1051)/Math Formula (#1044)/settings.xml +54 -0
  261. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1030)/Update Iter (#1051)/Table Row to Variable (#1033)/settings.xml +107 -0
  262. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1030)/Update Iter (#1051)/workflow.knime +215 -0
  263. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1030)/workflow.knime +470 -0
  264. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1031)/Database SQL Executor (#1027)/settings.xml +51 -0
  265. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1031)/Database SQL Executor (#1028)/settings.xml +51 -0
  266. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1031)/Database SQL Executor (#1040)/settings.xml +51 -0
  267. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1031)/How many tra (#1048)/Column Rename (#1043)/settings.xml +57 -0
  268. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1031)/How many tra (#1048)/Database Connection Table Reader (#53)/settings.xml +55 -0
  269. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1031)/How many tra (#1048)/Database Table Selector (#71)/settings.xml +66 -0
  270. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1031)/How many tra (#1048)/workflow.knime +170 -0
  271. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1031)/How many tra (#1049)/Column Rename (#1047)/settings.xml +57 -0
  272. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1031)/How many tra (#1049)/Database Connection Table Reader (#1045)/settings.xml +55 -0
  273. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1031)/How many tra (#1049)/Database Table Selector (#1046)/settings.xml +66 -0
  274. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1031)/How many tra (#1049)/workflow.knime +152 -0
  275. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1031)/Math Formula (#1036)/settings.xml +54 -0
  276. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1031)/Recursive Loop End (#1037)/settings.xml +91 -0
  277. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1031)/Recursive Loop Start (#1038)/settings.xml +68 -0
  278. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1031)/Stop loop_ (#1050)/Joiner (#78)/settings.xml +69 -0
  279. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1031)/Stop loop_ (#1050)/Rule Engine Variable (#79)/settings.xml +61 -0
  280. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1031)/Stop loop_ (#1050)/Table Row to Variable (#80)/settings.xml +93 -0
  281. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1031)/Stop loop_ (#1050)/workflow.knime +152 -0
  282. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1031)/Table Creator (#984)/settings.xml +80 -0
  283. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1031)/Table Row to Variable (#1035)/settings.xml +95 -0
  284. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1031)/Update Iter (#1051)/CASE Switch Variable _End_ (#1034)/settings.xml +55 -0
  285. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1031)/Update Iter (#1051)/CASE Switch Variable _Start_ (#1032)/settings.xml +74 -0
  286. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1031)/Update Iter (#1051)/Database SQL Executor (#1031)/settings.xml +51 -0
  287. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1031)/Update Iter (#1051)/Math Formula (#1044)/settings.xml +54 -0
  288. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1031)/Update Iter (#1051)/Table Row to Variable (#1033)/settings.xml +107 -0
  289. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1031)/Update Iter (#1051)/workflow.knime +215 -0
  290. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Refesh First (#1031)/workflow.knime +470 -0
  291. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Remove leave (#1033)/Empty Table Creator (#68)/settings.xml +71 -0
  292. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Remove leave (#1033)/Generic Loop Start (#55)/settings.xml +68 -0
  293. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Remove leave (#1033)/How many rea (#72)/Column Rename (#72)/settings.xml +57 -0
  294. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Remove leave (#1033)/How many rea (#72)/Database Connection Table Reader (#53)/settings.xml +55 -0
  295. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Remove leave (#1033)/How many rea (#72)/Database Table Selector (#71)/settings.xml +66 -0
  296. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Remove leave (#1033)/How many rea (#72)/workflow.knime +183 -0
  297. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Remove leave (#1033)/How many rea (#75)/Column Rename (#70)/settings.xml +57 -0
  298. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Remove leave (#1033)/How many rea (#75)/Database Connection Table Reader (#52)/settings.xml +55 -0
  299. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Remove leave (#1033)/How many rea (#75)/Database Table Selector (#67)/settings.xml +66 -0
  300. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Remove leave (#1033)/How many rea (#75)/workflow.knime +170 -0
  301. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Remove leave (#1033)/Stop loop_ (#81)/Joiner (#78)/settings.xml +69 -0
  302. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Remove leave (#1033)/Stop loop_ (#81)/Rule Engine Variable (#79)/settings.xml +61 -0
  303. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Remove leave (#1033)/Stop loop_ (#81)/Table Row to Variable (#80)/settings.xml +93 -0
  304. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Remove leave (#1033)/Stop loop_ (#81)/workflow.knime +170 -0
  305. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Remove leave (#1033)/Update firea (#1012)/Database SQL Executor (#39)/settings.xml +51 -0
  306. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Remove leave (#1033)/Update firea (#1012)/workflow.knime +126 -0
  307. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Remove leave (#1033)/Update firea (#73)/Database SQL Executor (#39)/settings.xml +51 -0
  308. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Remove leave (#1033)/Update firea (#73)/workflow.knime +126 -0
  309. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Remove leave (#1033)/Update reach (#1010)/Database SQL Executor (#66)/settings.xml +51 -0
  310. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Remove leave (#1033)/Update reach (#1010)/workflow.knime +126 -0
  311. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Remove leave (#1033)/Update reach (#1011)/Database SQL Executor (#66)/settings.xml +51 -0
  312. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Remove leave (#1033)/Update reach (#1011)/workflow.knime +126 -0
  313. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Remove leave (#1033)/Variable Condition Loop End (#56)/settings.xml +61 -0
  314. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Remove leave (#1033)/workflow.knime +434 -0
  315. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Source still (#1046)/CASE Switch Variable _End_ (#1045)/settings.xml +55 -0
  316. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Source still (#1046)/CASE Switch Variable _Start_ (#1039)/settings.xml +74 -0
  317. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Source still (#1046)/Database Connection Table Reader (#1038)/settings.xml +55 -0
  318. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Source still (#1046)/Database SQL Executor (#1044)/settings.xml +51 -0
  319. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Source still (#1046)/Database Table Selector (#1037)/settings.xml +66 -0
  320. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Source still (#1046)/Table Row to Variable (#1033)/settings.xml +95 -0
  321. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Source still (#1046)/workflow.knime +266 -0
  322. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Table Creator (#984)/settings.xml +101 -0
  323. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/Table Creator (#992)/settings.xml +113 -0
  324. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Get transfor (#1054)/workflow.knime +872 -0
  325. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Loop End (#1057)/settings.xml +55 -0
  326. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Table Creator (#567)/settings.xml +101 -0
  327. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Table Row To Variable Loop Start (#777)/settings.xml +137 -0
  328. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/Table Validator (#1063)/settings.xml +1687 -0
  329. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/WrappedNode Input (#1060)/settings.xml +155 -0
  330. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/WrappedNode Output (#1061)/settings.xml +77 -0
  331. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/settings.xml +51 -0
  332. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Compute scop (#1080)/workflow.knime +357 -0
  333. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Empty Table Switch (#581)/settings.xml +53 -0
  334. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Empty case (#756)/Cell Splitter (#573)/settings.xml +62 -0
  335. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Empty case (#756)/Cell Splitter (#574)/settings.xml +62 -0
  336. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Empty case (#756)/Column Filter (#576)/settings.xml +81 -0
  337. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Empty case (#756)/Column Rename (#577)/settings.xml +62 -0
  338. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Empty case (#756)/Column Resorter (#575)/settings.xml +57 -0
  339. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Empty case (#756)/Table Creator (#567)/settings.xml +101 -0
  340. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Empty case (#756)/workflow.knime +196 -0
  341. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/End IF (#582)/settings.xml +53 -0
  342. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Extract Table Dimension (#580)/settings.xml +74 -0
  343. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/GroupBy (#570)/settings.xml +126 -0
  344. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Chunk Loop Start (#744)/settings.xml +60 -0
  345. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Empty Table Switch (#731)/settings.xml +53 -0
  346. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Empty case (#756)/Cell Splitter (#573)/settings.xml +62 -0
  347. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Empty case (#756)/Cell Splitter (#574)/settings.xml +62 -0
  348. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Empty case (#756)/Column Filter (#576)/settings.xml +81 -0
  349. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Empty case (#756)/Column Rename (#577)/settings.xml +62 -0
  350. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Empty case (#756)/Column Resorter (#575)/settings.xml +57 -0
  351. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Empty case (#756)/Table Creator (#567)/settings.xml +101 -0
  352. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Empty case (#756)/workflow.knime +196 -0
  353. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/End IF (#757)/settings.xml +53 -0
  354. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Fire one rul (#758)/Catch Errors _Data Ports_ (#747)/settings.xml +74 -0
  355. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Fire one rul (#758)/RDKit Two Component Reaction (#748)/settings.xml +101 -0
  356. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Fire one rul (#758)/Reaction_err (#742)/Column Resorter (#568)/settings.xml +61 -0
  357. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Fire one rul (#758)/Reaction_err (#742)/RDKit From Molecule (#563)/settings.xml +119 -0
  358. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Fire one rul (#758)/Reaction_err (#742)/RDKit From Molecule (#564)/settings.xml +119 -0
  359. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Fire one rul (#758)/Reaction_err (#742)/RDKit From Molecule (#569)/settings.xml +119 -0
  360. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Fire one rul (#758)/Reaction_err (#742)/Table Creator (#567)/settings.xml +149 -0
  361. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Fire one rul (#758)/Reaction_err (#742)/workflow.knime +174 -0
  362. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Fire one rul (#758)/Try _Data Ports_ (#746)/settings.xml +53 -0
  363. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Fire one rul (#758)/Variable to Table Column (#737)/settings.xml +72 -0
  364. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Fire one rul (#758)/workflow.knime +260 -0
  365. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Loop End (#743)/settings.xml +55 -0
  366. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Loop End (#745)/settings.xml +55 -0
  367. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Parse result (#752)/Cell Splitter (#759)/settings.xml +62 -0
  368. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Parse result (#752)/Cell Splitter (#776)/settings.xml +62 -0
  369. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Parse result (#752)/Cell Splitter (#777)/settings.xml +62 -0
  370. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Parse result (#752)/Column Filter (#756)/settings.xml +83 -0
  371. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Parse result (#752)/Column Filter (#760)/settings.xml +80 -0
  372. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Parse result (#752)/Column Filter (#778)/settings.xml +81 -0
  373. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Parse result (#752)/Column Filter (#788)/settings.xml +80 -0
  374. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Parse result (#752)/Column Rename (#757)/settings.xml +72 -0
  375. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Parse result (#752)/Column Rename (#761)/settings.xml +57 -0
  376. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Parse result (#752)/Column Rename (#781)/settings.xml +57 -0
  377. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Parse result (#752)/Column Resorter (#762)/settings.xml +57 -0
  378. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Parse result (#752)/Empty Table Switch (#782)/settings.xml +53 -0
  379. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Parse result (#752)/Empty case (#784)/Cell Splitter (#573)/settings.xml +62 -0
  380. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Parse result (#752)/Empty case (#784)/Cell Splitter (#574)/settings.xml +62 -0
  381. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Parse result (#752)/Empty case (#784)/Column Filter (#576)/settings.xml +81 -0
  382. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Parse result (#752)/Empty case (#784)/Column Rename (#577)/settings.xml +62 -0
  383. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Parse result (#752)/Empty case (#784)/Column Resorter (#575)/settings.xml +57 -0
  384. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Parse result (#752)/Empty case (#784)/Table Creator (#567)/settings.xml +101 -0
  385. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Parse result (#752)/Empty case (#784)/workflow.knime +196 -0
  386. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Parse result (#752)/End IF (#783)/settings.xml +53 -0
  387. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Parse result (#752)/GroupBy (#780)/settings.xml +146 -0
  388. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Parse result (#752)/String Replacer (#763)/settings.xml +59 -0
  389. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Parse result (#752)/String Replacer (#786)/settings.xml +59 -0
  390. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Parse result (#752)/String Replacer (#787)/settings.xml +59 -0
  391. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Parse result (#752)/Unpivoting (#779)/settings.xml +126 -0
  392. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Parse result (#752)/workflow.knime +546 -0
  393. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Reference Column Filter (#729)/settings.xml +60 -0
  394. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Table Creator (#730)/settings.xml +80 -0
  395. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/Table Row To Variable Loop Start (#735)/settings.xml +77 -0
  396. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/BI (#598)/workflow.knime +463 -0
  397. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Column Filter (#599)/settings.xml +78 -0
  398. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Column Filter (#600)/settings.xml +78 -0
  399. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Concatenate (#575)/settings.xml +55 -0
  400. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Empty Table Switch (#731)/settings.xml +53 -0
  401. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Empty Table Switch (#938)/settings.xml +53 -0
  402. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Empty case (#749)/Cell Splitter (#573)/settings.xml +62 -0
  403. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Empty case (#749)/Cell Splitter (#574)/settings.xml +62 -0
  404. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Empty case (#749)/Column Filter (#576)/settings.xml +81 -0
  405. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Empty case (#749)/Column Rename (#577)/settings.xml +62 -0
  406. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Empty case (#749)/Column Resorter (#575)/settings.xml +57 -0
  407. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Empty case (#749)/Table Creator (#567)/settings.xml +101 -0
  408. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Empty case (#749)/workflow.knime +196 -0
  409. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/End IF (#744)/settings.xml +53 -0
  410. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/End IF (#939)/settings.xml +53 -0
  411. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Filter rules (#937)/Cell Splitter (#929)/settings.xml +62 -0
  412. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Filter rules (#937)/Column Filter (#930)/settings.xml +85 -0
  413. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Filter rules (#937)/Column Rename (#931)/settings.xml +57 -0
  414. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Filter rules (#937)/Molecule Type Cast (#933)/settings.xml +52 -0
  415. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Filter rules (#937)/Parse outter (#969)/CASE Switch Data _End_ (#960)/settings.xml +53 -0
  416. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Filter rules (#937)/Parse outter (#969)/CASE Switch Data _Start_ (#961)/settings.xml +74 -0
  417. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Filter rules (#937)/Parse outter (#969)/Column Filter (#968)/settings.xml +78 -0
  418. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Filter rules (#937)/Parse outter (#969)/Concatenate (#967)/settings.xml +55 -0
  419. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Filter rules (#937)/Parse outter (#969)/Extract Variables _Data_ (#958)/settings.xml +49 -0
  420. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Filter rules (#937)/Parse outter (#969)/Rule_based Row Splitter (#964)/settings.xml +71 -0
  421. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Filter rules (#937)/Parse outter (#969)/String Manipulation (#962)/settings.xml +56 -0
  422. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Filter rules (#937)/Parse outter (#969)/String Manipulation (#963)/settings.xml +56 -0
  423. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Filter rules (#937)/Parse outter (#969)/String Manipulation (#965)/settings.xml +56 -0
  424. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Filter rules (#937)/Parse outter (#969)/workflow.knime +325 -0
  425. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Filter rules (#937)/RDKit Molecule Substructure Filter (#928)/settings.xml +89 -0
  426. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Filter rules (#937)/Reference Row Filter (#936)/settings.xml +71 -0
  427. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Filter rules (#937)/Ungroup (#934)/settings.xml +92 -0
  428. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Filter rules (#937)/workflow.knime +309 -0
  429. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Fire rules (#951)/CASE Switch Data _End_ (#948)/settings.xml +53 -0
  430. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Fire rules (#951)/CASE Switch Data _Start_ (#947)/settings.xml +74 -0
  431. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Fire rules (#951)/Fire one rul (#750)/Catch Errors _Data Ports_ (#739)/settings.xml +74 -0
  432. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Fire rules (#951)/Fire one rul (#750)/RDKit One Component Reaction (#736)/settings.xml +91 -0
  433. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Fire rules (#951)/Fire one rul (#750)/Reaction_err (#742)/Column Resorter (#568)/settings.xml +59 -0
  434. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Fire rules (#951)/Fire one rul (#750)/Reaction_err (#742)/RDKit From Molecule (#563)/settings.xml +119 -0
  435. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Fire rules (#951)/Fire one rul (#750)/Reaction_err (#742)/RDKit From Molecule (#564)/settings.xml +119 -0
  436. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Fire rules (#951)/Fire one rul (#750)/Reaction_err (#742)/Table Creator (#567)/settings.xml +125 -0
  437. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Fire rules (#951)/Fire one rul (#750)/Reaction_err (#742)/workflow.knime +152 -0
  438. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Fire rules (#951)/Fire one rul (#750)/Try _Variable Ports_ (#741)/settings.xml +53 -0
  439. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Fire rules (#951)/Fire one rul (#750)/Variable to Table Column (#737)/settings.xml +72 -0
  440. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Fire rules (#951)/Fire one rul (#750)/workflow.knime +229 -0
  441. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Fire rules (#951)/Loop End (#743)/settings.xml +55 -0
  442. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Fire rules (#951)/Python Script _2_1_ (#950)/settings.xml +52 -0
  443. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Fire rules (#951)/Table Row To Variable Loop Start (#735)/settings.xml +125 -0
  444. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Fire rules (#951)/workflow.knime +293 -0
  445. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Parse result (#752)/Cell Splitter (#758)/settings.xml +62 -0
  446. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Parse result (#752)/Cell Splitter (#759)/settings.xml +62 -0
  447. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Parse result (#752)/Column Filter (#756)/settings.xml +81 -0
  448. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Parse result (#752)/Column Filter (#760)/settings.xml +82 -0
  449. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Parse result (#752)/Column Rename (#757)/settings.xml +67 -0
  450. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Parse result (#752)/Column Rename (#761)/settings.xml +62 -0
  451. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Parse result (#752)/Column Resorter (#762)/settings.xml +57 -0
  452. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Parse result (#752)/String Replacer (#763)/settings.xml +59 -0
  453. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Parse result (#752)/String Replacer (#764)/settings.xml +59 -0
  454. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Parse result (#752)/workflow.knime +289 -0
  455. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Reference Column Filter (#729)/settings.xml +60 -0
  456. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/Table Creator (#730)/settings.xml +80 -0
  457. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Mono (#595)/workflow.knime +406 -0
  458. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/Rule_based Row Splitter (#481)/settings.xml +71 -0
  459. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Reaction Enu (#579)/workflow.knime +375 -0
  460. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Rule_based Row Filter (#574)/settings.xml +67 -0
  461. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Sorter (#571)/settings.xml +60 -0
  462. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Table Row To Variable Loop Start (#575)/settings.xml +125 -0
  463. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/Variable Condition Loop End (#576)/settings.xml +61 -0
  464. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/WrappedNode Input (#757)/settings.xml +190 -0
  465. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/WrappedNode Output (#758)/settings.xml +77 -0
  466. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/settings.xml +63 -0
  467. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/FIRE (#782)/workflow.knime +410 -0
  468. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Java Edit Variable (#1049)/settings.xml +100 -0
  469. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Java Edit Variable (#909)/settings.xml +100 -0
  470. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Loop End (#784)/settings.xml +55 -0
  471. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Merge Variables (#1050)/settings.xml +49 -0
  472. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Merge Variables (#1084)/settings.xml +49 -0
  473. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Canonic SMIL (#820)/RDKit Canon SMILES (#814)/settings.xml +65 -0
  474. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Canonic SMIL (#820)/String Replacer (#945)/settings.xml +59 -0
  475. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Canonic SMIL (#820)/workflow.knime +135 -0
  476. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Canonic SMIL (#898)/RDKit Canon SMILES (#814)/settings.xml +65 -0
  477. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Canonic SMIL (#898)/String Replacer (#945)/settings.xml +59 -0
  478. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Canonic SMIL (#898)/workflow.knime +135 -0
  479. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Column Rename (#943)/settings.xml +57 -0
  480. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Extract Left (#824)/Column Filter (#794)/settings.xml +80 -0
  481. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Extract Left (#824)/GroupBy (#803)/settings.xml +129 -0
  482. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Extract Left (#824)/Ungroup (#796)/settings.xml +90 -0
  483. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Extract Left (#824)/workflow.knime +157 -0
  484. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Extract Righ (#825)/Column Filter (#797)/settings.xml +80 -0
  485. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Extract Righ (#825)/GroupBy (#804)/settings.xml +129 -0
  486. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Extract Righ (#825)/Ungroup (#798)/settings.xml +90 -0
  487. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Extract Righ (#825)/workflow.knime +157 -0
  488. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Filter (#951)/Reference Row Filter (#949)/settings.xml +71 -0
  489. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Filter (#951)/Ungroup (#950)/settings.xml +90 -0
  490. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Filter (#951)/workflow.knime +157 -0
  491. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Filter (#952)/GroupBy (#952)/settings.xml +147 -0
  492. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Filter (#952)/Reference Row Filter (#949)/settings.xml +71 -0
  493. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Filter (#952)/RowID (#953)/settings.xml +90 -0
  494. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Filter (#952)/Ungroup (#950)/settings.xml +90 -0
  495. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Filter (#952)/Ungroup (#951)/settings.xml +87 -0
  496. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Filter (#952)/workflow.knime +223 -0
  497. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Filter (#953)/GroupBy (#952)/settings.xml +147 -0
  498. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Filter (#953)/Reference Row Filter (#949)/settings.xml +71 -0
  499. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Filter (#953)/RowID (#953)/settings.xml +90 -0
  500. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Filter (#953)/Ungroup (#950)/settings.xml +90 -0
  501. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Filter (#953)/Ungroup (#951)/settings.xml +87 -0
  502. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Filter (#953)/workflow.knime +223 -0
  503. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/GroupBy (#944)/settings.xml +130 -0
  504. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#938)/InChI (#818)/RDKit To InChI (#636)/settings.xml +105 -0
  505. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#938)/InChI (#818)/workflow.knime +113 -0
  506. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#938)/Lite InChI (#755)/Column Filter (#755)/settings.xml +81 -0
  507. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#938)/Lite InChI (#755)/Column Rename (#756)/settings.xml +57 -0
  508. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#938)/Lite InChI (#755)/Column Resorter (#759)/settings.xml +59 -0
  509. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#938)/Lite InChI (#755)/Joiner (#758)/settings.xml +85 -0
  510. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#938)/Lite InChI (#755)/Lite InChI (#751)/Concatenate _Optional in_ (#648)/settings.xml +55 -0
  511. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#938)/Lite InChI (#755)/Lite InChI (#751)/Concatenate _Optional in_ (#651)/settings.xml +55 -0
  512. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#938)/Lite InChI (#755)/Lite InChI (#751)/Rule_based Row Splitter (#639)/settings.xml +71 -0
  513. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#938)/Lite InChI (#755)/Lite InChI (#751)/Rule_based Row Splitter (#641)/settings.xml +71 -0
  514. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#938)/Lite InChI (#755)/Lite InChI (#751)/Rule_based Row Splitter (#644)/settings.xml +71 -0
  515. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#938)/Lite InChI (#755)/Lite InChI (#751)/Rule_based Row Splitter (#646)/settings.xml +71 -0
  516. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#938)/Lite InChI (#755)/Lite InChI (#751)/Rule_based Row Splitter (#649)/settings.xml +71 -0
  517. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#938)/Lite InChI (#755)/Lite InChI (#751)/String Manipulation (#640)/settings.xml +56 -0
  518. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#938)/Lite InChI (#755)/Lite InChI (#751)/String Manipulation (#645)/settings.xml +56 -0
  519. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#938)/Lite InChI (#755)/Lite InChI (#751)/String Manipulation (#647)/settings.xml +56 -0
  520. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#938)/Lite InChI (#755)/Lite InChI (#751)/String Manipulation (#650)/settings.xml +56 -0
  521. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#938)/Lite InChI (#755)/Lite InChI (#751)/workflow.knime +357 -0
  522. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#938)/Lite InChI (#755)/Rule_based Row Splitter (#753)/settings.xml +71 -0
  523. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#938)/Lite InChI (#755)/workflow.knime +238 -0
  524. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#938)/workflow.knime +135 -0
  525. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#947)/InChI (#818)/RDKit To InChI (#636)/settings.xml +105 -0
  526. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#947)/InChI (#818)/workflow.knime +113 -0
  527. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#947)/Lite InChI (#755)/Column Filter (#755)/settings.xml +81 -0
  528. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#947)/Lite InChI (#755)/Column Rename (#756)/settings.xml +57 -0
  529. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#947)/Lite InChI (#755)/Column Resorter (#759)/settings.xml +59 -0
  530. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#947)/Lite InChI (#755)/Joiner (#758)/settings.xml +85 -0
  531. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#947)/Lite InChI (#755)/Lite InChI (#751)/Concatenate _Optional in_ (#648)/settings.xml +55 -0
  532. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#947)/Lite InChI (#755)/Lite InChI (#751)/Concatenate _Optional in_ (#651)/settings.xml +55 -0
  533. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#947)/Lite InChI (#755)/Lite InChI (#751)/Rule_based Row Splitter (#639)/settings.xml +71 -0
  534. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#947)/Lite InChI (#755)/Lite InChI (#751)/Rule_based Row Splitter (#641)/settings.xml +71 -0
  535. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#947)/Lite InChI (#755)/Lite InChI (#751)/Rule_based Row Splitter (#644)/settings.xml +71 -0
  536. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#947)/Lite InChI (#755)/Lite InChI (#751)/Rule_based Row Splitter (#646)/settings.xml +71 -0
  537. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#947)/Lite InChI (#755)/Lite InChI (#751)/Rule_based Row Splitter (#649)/settings.xml +71 -0
  538. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#947)/Lite InChI (#755)/Lite InChI (#751)/String Manipulation (#640)/settings.xml +56 -0
  539. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#947)/Lite InChI (#755)/Lite InChI (#751)/String Manipulation (#645)/settings.xml +56 -0
  540. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#947)/Lite InChI (#755)/Lite InChI (#751)/String Manipulation (#647)/settings.xml +56 -0
  541. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#947)/Lite InChI (#755)/Lite InChI (#751)/String Manipulation (#650)/settings.xml +56 -0
  542. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#947)/Lite InChI (#755)/Lite InChI (#751)/workflow.knime +357 -0
  543. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#947)/Lite InChI (#755)/Rule_based Row Splitter (#753)/settings.xml +71 -0
  544. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#947)/Lite InChI (#755)/workflow.knime +238 -0
  545. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/InChI (#947)/workflow.knime +135 -0
  546. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Joiner (#940)/settings.xml +83 -0
  547. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Joiner (#941)/settings.xml +88 -0
  548. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/Cast to RDKi (#950)/Molecule Type Cast (#947)/settings.xml +52 -0
  549. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/Cast to RDKi (#950)/RDKit From Molecule (#946)/settings.xml +119 -0
  550. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/Cast to RDKi (#950)/workflow.knime +148 -0
  551. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/Column Rename (#758)/settings.xml +57 -0
  552. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/Joiner (#803)/settings.xml +83 -0
  553. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/CASE Switch Data _End_ (#728)/settings.xml +53 -0
  554. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/CASE Switch Data _Start_ (#725)/settings.xml +74 -0
  555. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/CASE Switch Data _Start_ (#735)/settings.xml +74 -0
  556. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/Column Filter (#715)/settings.xml +80 -0
  557. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/Column Filter (#729)/settings.xml +83 -0
  558. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/Column Filter (#738)/settings.xml +82 -0
  559. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/Column Filter (#739)/settings.xml +78 -0
  560. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/Column Filter (#808)/settings.xml +80 -0
  561. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/Column Rename (#740)/settings.xml +57 -0
  562. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/Concatenate _Optional in_ (#721)/settings.xml +55 -0
  563. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/End IF (#737)/settings.xml +53 -0
  564. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/Lite InChI (#683)/Concatenate _Optional in_ (#648)/settings.xml +55 -0
  565. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/Lite InChI (#683)/RDKit To InChI (#636)/settings.xml +105 -0
  566. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/Lite InChI (#683)/Rule_based Row Splitter (#639)/settings.xml +71 -0
  567. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/Lite InChI (#683)/Rule_based Row Splitter (#641)/settings.xml +71 -0
  568. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/Lite InChI (#683)/Rule_based Row Splitter (#644)/settings.xml +71 -0
  569. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/Lite InChI (#683)/String Manipulation (#640)/settings.xml +56 -0
  570. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/Lite InChI (#683)/String Manipulation (#645)/settings.xml +56 -0
  571. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/Lite InChI (#683)/workflow.knime +257 -0
  572. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/Merge Variables (#810)/settings.xml +49 -0
  573. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/RDKit Add Hs (#704)/settings.xml +65 -0
  574. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/RDKit Add Hs (#809)/settings.xml +65 -0
  575. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/RDKit Aromatizer (#705)/settings.xml +65 -0
  576. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/RDKit Canon SMILES (#811)/settings.xml +65 -0
  577. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/RDKit Chemical Transformation (#686)/settings.xml +75 -0
  578. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/RDKit From InChI (#736)/settings.xml +95 -0
  579. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/RDKit From Molecule (#710)/settings.xml +119 -0
  580. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/RDKit Kekulizer (#741)/settings.xml +65 -0
  581. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/RDKit Kekulizer (#807)/settings.xml +65 -0
  582. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/RDKit Salt Stripper (#703)/settings.xml +75 -0
  583. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/Row Splitter (#718)/settings.xml +60 -0
  584. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/Row Splitter (#745)/settings.xml +60 -0
  585. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/Table Creator (#709)/settings.xml +98 -0
  586. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/Table Creator (#743)/settings.xml +125 -0
  587. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/WrappedNode Input (#726)/settings.xml +134 -0
  588. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/WrappedNode Output (#746)/settings.xml +88 -0
  589. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/settings.xml +58 -0
  590. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/StandardizeC (#750)/workflow.knime +818 -0
  591. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#945)/workflow.knime +221 -0
  592. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/Cast to RDKi (#950)/Molecule Type Cast (#947)/settings.xml +52 -0
  593. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/Cast to RDKi (#950)/RDKit From Molecule (#946)/settings.xml +119 -0
  594. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/Cast to RDKi (#950)/workflow.knime +139 -0
  595. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/Column Filter (#809)/settings.xml +79 -0
  596. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/Column Filter (#948)/settings.xml +79 -0
  597. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/Column Rename (#758)/settings.xml +57 -0
  598. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/Concatenate (#949)/settings.xml +55 -0
  599. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/Joiner (#803)/settings.xml +83 -0
  600. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/Joiner (#804)/settings.xml +83 -0
  601. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/CASE Switch Data _End_ (#728)/settings.xml +53 -0
  602. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/CASE Switch Data _Start_ (#725)/settings.xml +74 -0
  603. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/CASE Switch Data _Start_ (#735)/settings.xml +74 -0
  604. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/Column Filter (#715)/settings.xml +80 -0
  605. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/Column Filter (#729)/settings.xml +83 -0
  606. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/Column Filter (#738)/settings.xml +82 -0
  607. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/Column Filter (#739)/settings.xml +78 -0
  608. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/Column Filter (#808)/settings.xml +80 -0
  609. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/Column Rename (#740)/settings.xml +57 -0
  610. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/Concatenate _Optional in_ (#721)/settings.xml +55 -0
  611. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/End IF (#737)/settings.xml +53 -0
  612. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/Lite InChI (#683)/Concatenate _Optional in_ (#648)/settings.xml +55 -0
  613. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/Lite InChI (#683)/RDKit To InChI (#636)/settings.xml +105 -0
  614. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/Lite InChI (#683)/Rule_based Row Splitter (#639)/settings.xml +71 -0
  615. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/Lite InChI (#683)/Rule_based Row Splitter (#641)/settings.xml +71 -0
  616. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/Lite InChI (#683)/Rule_based Row Splitter (#644)/settings.xml +71 -0
  617. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/Lite InChI (#683)/String Manipulation (#640)/settings.xml +56 -0
  618. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/Lite InChI (#683)/String Manipulation (#645)/settings.xml +56 -0
  619. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/Lite InChI (#683)/workflow.knime +257 -0
  620. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/Merge Variables (#810)/settings.xml +49 -0
  621. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/RDKit Add Hs (#704)/settings.xml +65 -0
  622. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/RDKit Add Hs (#809)/settings.xml +65 -0
  623. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/RDKit Aromatizer (#705)/settings.xml +65 -0
  624. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/RDKit Canon SMILES (#811)/settings.xml +65 -0
  625. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/RDKit Chemical Transformation (#686)/settings.xml +75 -0
  626. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/RDKit From InChI (#736)/settings.xml +95 -0
  627. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/RDKit From Molecule (#710)/settings.xml +119 -0
  628. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/RDKit Kekulizer (#741)/settings.xml +65 -0
  629. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/RDKit Kekulizer (#807)/settings.xml +65 -0
  630. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/RDKit Salt Stripper (#703)/settings.xml +75 -0
  631. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/Row Splitter (#718)/settings.xml +60 -0
  632. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/Row Splitter (#745)/settings.xml +60 -0
  633. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/Table Creator (#709)/settings.xml +98 -0
  634. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/Table Creator (#743)/settings.xml +125 -0
  635. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/WrappedNode Input (#726)/settings.xml +134 -0
  636. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/WrappedNode Output (#746)/settings.xml +88 -0
  637. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/settings.xml +58 -0
  638. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/StandardizeC (#750)/workflow.knime +818 -0
  639. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Sanitize (#946)/workflow.knime +352 -0
  640. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Transformati (#795)/Column Combiner (#792)/settings.xml +88 -0
  641. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Transformati (#795)/Column Filter (#793)/settings.xml +85 -0
  642. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Transformati (#795)/Column Resorter (#794)/settings.xml +58 -0
  643. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Transformati (#795)/Constant Value Column (#787)/settings.xml +55 -0
  644. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Transformati (#795)/Constant Value Column (#795)/settings.xml +61 -0
  645. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Transformati (#795)/Constant Value Column (#796)/settings.xml +61 -0
  646. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Transformati (#795)/Math Formula (#791)/settings.xml +54 -0
  647. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Transformati (#795)/workflow.knime +282 -0
  648. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Transformati (#827)/Column Filter (#800)/settings.xml +80 -0
  649. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Transformati (#827)/GroupBy (#803)/settings.xml +159 -0
  650. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Transformati (#827)/Joiner (#801)/settings.xml +86 -0
  651. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Transformati (#827)/Ungroup (#802)/settings.xml +90 -0
  652. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Transformati (#827)/workflow.knime +201 -0
  653. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/Ungroup (#942)/settings.xml +92 -0
  654. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/WrappedNode Input (#939)/settings.xml +189 -0
  655. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/WrappedNode Output (#896)/settings.xml +93 -0
  656. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/settings.xml +75 -0
  657. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/PARSE (#914)/workflow.knime +634 -0
  658. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Recursive Loop End _2 ports_ (#783)/settings.xml +91 -0
  659. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Recursive Loop Start _2 ports_ (#781)/settings.xml +72 -0
  660. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Remove globa (#1083)/Build csv pa (#1072)/Column Appender (#1075)/settings.xml +60 -0
  661. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Remove globa (#1083)/Build csv pa (#1072)/Java Snippet (#1073)/settings.xml +105 -0
  662. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Remove globa (#1083)/Build csv pa (#1072)/Table Row to Variable (#1076)/settings.xml +119 -0
  663. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Remove globa (#1083)/Build csv pa (#1072)/Variable to Table Row (#1070)/settings.xml +73 -0
  664. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Remove globa (#1083)/Build csv pa (#1072)/Variable to Table Row (#1074)/settings.xml +74 -0
  665. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Remove globa (#1083)/Build csv pa (#1072)/workflow.knime +225 -0
  666. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Remove globa (#1083)/Delete Files (#966)/settings.xml +52 -0
  667. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Remove globa (#1083)/String to URI (#971)/settings.xml +70 -0
  668. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Remove globa (#1083)/Variable to Table Row (#968)/settings.xml +75 -0
  669. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Remove globa (#1083)/WrappedNode Input (#972)/settings.xml +109 -0
  670. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Remove globa (#1083)/WrappedNode Output (#973)/settings.xml +65 -0
  671. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Remove globa (#1083)/settings.xml +45 -0
  672. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Remove globa (#1083)/workflow.knime +169 -0
  673. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Rules (#940)/CSV Reader (#725)/settings.xml +68 -0
  674. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Rules (#940)/Column Combiner (#729)/settings.xml +86 -0
  675. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Rules (#940)/Column Resorter (#730)/settings.xml +60 -0
  676. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Rules (#940)/Column Resorter (#731)/settings.xml +61 -0
  677. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Rules (#940)/Domain Calculator (#942)/settings.xml +119 -0
  678. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Rules (#940)/GroupBy (#726)/settings.xml +171 -0
  679. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Rules (#940)/Math Formula (#948)/settings.xml +54 -0
  680. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Rules (#940)/Missing Value (#721)/settings.xml +146 -0
  681. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Rules (#940)/RowID (#939)/settings.xml +90 -0
  682. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Rules (#940)/Rule_based Row Filter (#722)/settings.xml +67 -0
  683. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Rules (#940)/Table Validator (#724)/settings.xml +195 -0
  684. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Rules (#940)/WrappedNode Input (#940)/settings.xml +131 -0
  685. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Rules (#940)/WrappedNode Output (#941)/settings.xml +80 -0
  686. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Rules (#940)/settings.xml +45 -0
  687. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Rules (#940)/workflow.knime +338 -0
  688. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Cofactor (#856)/Ref table (#911)/Extract Column Header (#907)/settings.xml +69 -0
  689. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Cofactor (#856)/Ref table (#911)/Table Creator (#906)/settings.xml +113 -0
  690. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Cofactor (#856)/Ref table (#911)/Transpose (#908)/settings.xml +55 -0
  691. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Cofactor (#856)/Ref table (#911)/workflow.knime +152 -0
  692. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Cofactor (#856)/Reference Column Filter (#904)/settings.xml +60 -0
  693. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Cofactor (#856)/Reference Column Resorter (#905)/settings.xml +60 -0
  694. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Cofactor (#856)/Rule_based Row Filter (#776)/settings.xml +67 -0
  695. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Cofactor (#856)/workflow.knime +185 -0
  696. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/CSV Reader (#480)/settings.xml +68 -0
  697. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Column Resorter (#782)/settings.xml +61 -0
  698. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Concatenate _Optional in_ (#776)/settings.xml +55 -0
  699. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Constant Value Column (#768)/settings.xml +55 -0
  700. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Constant Value Column (#769)/settings.xml +55 -0
  701. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Constant Value Column (#774)/settings.xml +55 -0
  702. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/GroupBy (#778)/settings.xml +182 -0
  703. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Mass Filter (#784)/Column Filter (#781)/settings.xml +80 -0
  704. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Mass Filter (#784)/RDKit Descriptor Calculation (#779)/settings.xml +67 -0
  705. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Mass Filter (#784)/Rule_based Row Filter (#780)/settings.xml +67 -0
  706. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Mass Filter (#784)/workflow.knime +179 -0
  707. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Mass Filter (#785)/Column Filter (#781)/settings.xml +80 -0
  708. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Mass Filter (#785)/RDKit Descriptor Calculation (#779)/settings.xml +67 -0
  709. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Mass Filter (#785)/Rule_based Row Filter (#780)/settings.xml +67 -0
  710. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Mass Filter (#785)/workflow.knime +179 -0
  711. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Missing Value (#777)/settings.xml +122 -0
  712. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Compute Lite (#762)/Lite InChI (#751)/Concatenate _Optional in_ (#648)/settings.xml +55 -0
  713. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Compute Lite (#762)/Lite InChI (#751)/Concatenate _Optional in_ (#651)/settings.xml +55 -0
  714. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Compute Lite (#762)/Lite InChI (#751)/Rule_based Row Splitter (#639)/settings.xml +71 -0
  715. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Compute Lite (#762)/Lite InChI (#751)/Rule_based Row Splitter (#641)/settings.xml +71 -0
  716. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Compute Lite (#762)/Lite InChI (#751)/Rule_based Row Splitter (#644)/settings.xml +71 -0
  717. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Compute Lite (#762)/Lite InChI (#751)/Rule_based Row Splitter (#646)/settings.xml +71 -0
  718. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Compute Lite (#762)/Lite InChI (#751)/Rule_based Row Splitter (#649)/settings.xml +71 -0
  719. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Compute Lite (#762)/Lite InChI (#751)/String Manipulation (#640)/settings.xml +56 -0
  720. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Compute Lite (#762)/Lite InChI (#751)/String Manipulation (#645)/settings.xml +56 -0
  721. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Compute Lite (#762)/Lite InChI (#751)/String Manipulation (#647)/settings.xml +56 -0
  722. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Compute Lite (#762)/Lite InChI (#751)/String Manipulation (#650)/settings.xml +56 -0
  723. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Compute Lite (#762)/Lite InChI (#751)/workflow.knime +357 -0
  724. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Compute Lite (#762)/RDKit To InChI (#636)/settings.xml +105 -0
  725. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Compute Lite (#762)/Rule_based Row Splitter (#753)/settings.xml +71 -0
  726. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Compute Lite (#762)/workflow.knime +157 -0
  727. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/GroupBy (#760)/settings.xml +158 -0
  728. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/GroupBy (#765)/settings.xml +147 -0
  729. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Load as Rdki (#758)/Column Filter (#733)/settings.xml +79 -0
  730. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Load as Rdki (#758)/RDKit From InChI (#732)/settings.xml +95 -0
  731. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Load as Rdki (#758)/workflow.knime +135 -0
  732. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Pass only mo (#763)/Cell Splitter (#746)/settings.xml +62 -0
  733. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Pass only mo (#763)/Column Filter (#750)/settings.xml +83 -0
  734. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Pass only mo (#763)/Rule_based Row Splitter (#749)/settings.xml +71 -0
  735. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Pass only mo (#763)/workflow.knime +157 -0
  736. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/SMILES (#759)/RDKit Canon SMILES (#465)/settings.xml +65 -0
  737. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/SMILES (#759)/Rule_based Row Splitter (#637)/settings.xml +71 -0
  738. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/SMILES (#759)/String Replacer (#639)/settings.xml +59 -0
  739. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/SMILES (#759)/workflow.knime +157 -0
  740. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Column Rename (#758)/settings.xml +57 -0
  741. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Joiner (#803)/settings.xml +83 -0
  742. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/CASE Switch Data _End_ (#728)/settings.xml +53 -0
  743. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/CASE Switch Data _Start_ (#725)/settings.xml +74 -0
  744. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/CASE Switch Data _Start_ (#735)/settings.xml +74 -0
  745. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/Column Filter (#715)/settings.xml +80 -0
  746. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/Column Filter (#729)/settings.xml +83 -0
  747. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/Column Filter (#738)/settings.xml +82 -0
  748. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/Column Filter (#739)/settings.xml +78 -0
  749. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/Column Filter (#808)/settings.xml +80 -0
  750. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/Column Rename (#740)/settings.xml +57 -0
  751. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/Concatenate _Optional in_ (#721)/settings.xml +55 -0
  752. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/End IF (#737)/settings.xml +53 -0
  753. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/Lite InChI (#683)/Concatenate _Optional in_ (#648)/settings.xml +55 -0
  754. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/Lite InChI (#683)/RDKit To InChI (#636)/settings.xml +105 -0
  755. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/Lite InChI (#683)/Rule_based Row Splitter (#639)/settings.xml +71 -0
  756. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/Lite InChI (#683)/Rule_based Row Splitter (#641)/settings.xml +71 -0
  757. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/Lite InChI (#683)/Rule_based Row Splitter (#644)/settings.xml +71 -0
  758. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/Lite InChI (#683)/String Manipulation (#640)/settings.xml +56 -0
  759. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/Lite InChI (#683)/String Manipulation (#645)/settings.xml +56 -0
  760. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/Lite InChI (#683)/workflow.knime +257 -0
  761. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/Merge Variables (#810)/settings.xml +49 -0
  762. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/RDKit Add Hs (#704)/settings.xml +65 -0
  763. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/RDKit Add Hs (#809)/settings.xml +65 -0
  764. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/RDKit Aromatizer (#705)/settings.xml +65 -0
  765. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/RDKit Canon SMILES (#811)/settings.xml +65 -0
  766. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/RDKit Chemical Transformation (#686)/settings.xml +75 -0
  767. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/RDKit From InChI (#736)/settings.xml +95 -0
  768. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/RDKit From Molecule (#710)/settings.xml +119 -0
  769. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/RDKit Kekulizer (#741)/settings.xml +65 -0
  770. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/RDKit Kekulizer (#807)/settings.xml +65 -0
  771. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/RDKit Salt Stripper (#703)/settings.xml +75 -0
  772. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/Row Splitter (#718)/settings.xml +60 -0
  773. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/Row Splitter (#745)/settings.xml +60 -0
  774. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/Table Creator (#709)/settings.xml +98 -0
  775. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/Table Creator (#743)/settings.xml +125 -0
  776. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/WrappedNode Input (#726)/settings.xml +182 -0
  777. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/WrappedNode Output (#746)/settings.xml +88 -0
  778. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/settings.xml +58 -0
  779. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/Standardize (#750)/workflow.knime +818 -0
  780. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Sanitize (#766)/workflow.knime +185 -0
  781. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/Table Validator (#761)/settings.xml +117 -0
  782. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Cofact (#775)/workflow.knime +289 -0
  783. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Compute Lite (#755)/Lite InChI (#751)/Concatenate _Optional in_ (#648)/settings.xml +55 -0
  784. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Compute Lite (#755)/Lite InChI (#751)/Concatenate _Optional in_ (#651)/settings.xml +55 -0
  785. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Compute Lite (#755)/Lite InChI (#751)/Rule_based Row Splitter (#639)/settings.xml +71 -0
  786. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Compute Lite (#755)/Lite InChI (#751)/Rule_based Row Splitter (#641)/settings.xml +71 -0
  787. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Compute Lite (#755)/Lite InChI (#751)/Rule_based Row Splitter (#644)/settings.xml +71 -0
  788. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Compute Lite (#755)/Lite InChI (#751)/Rule_based Row Splitter (#646)/settings.xml +71 -0
  789. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Compute Lite (#755)/Lite InChI (#751)/Rule_based Row Splitter (#649)/settings.xml +71 -0
  790. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Compute Lite (#755)/Lite InChI (#751)/String Manipulation (#640)/settings.xml +56 -0
  791. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Compute Lite (#755)/Lite InChI (#751)/String Manipulation (#645)/settings.xml +56 -0
  792. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Compute Lite (#755)/Lite InChI (#751)/String Manipulation (#647)/settings.xml +56 -0
  793. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Compute Lite (#755)/Lite InChI (#751)/String Manipulation (#650)/settings.xml +56 -0
  794. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Compute Lite (#755)/Lite InChI (#751)/workflow.knime +357 -0
  795. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Compute Lite (#755)/RDKit To InChI (#636)/settings.xml +105 -0
  796. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Compute Lite (#755)/Rule_based Row Splitter (#753)/settings.xml +71 -0
  797. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Compute Lite (#755)/workflow.knime +157 -0
  798. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/GroupBy (#744)/settings.xml +147 -0
  799. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/GroupBy (#757)/settings.xml +158 -0
  800. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Load as Rdki (#756)/Column Filter (#733)/settings.xml +79 -0
  801. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Load as Rdki (#756)/RDKit From InChI (#732)/settings.xml +95 -0
  802. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Load as Rdki (#756)/workflow.knime +135 -0
  803. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Pass only mo (#752)/Cell Splitter (#746)/settings.xml +62 -0
  804. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Pass only mo (#752)/Column Filter (#750)/settings.xml +83 -0
  805. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Pass only mo (#752)/Rule_based Row Splitter (#749)/settings.xml +71 -0
  806. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Pass only mo (#752)/workflow.knime +157 -0
  807. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/SMILES (#745)/RDKit Canon SMILES (#465)/settings.xml +65 -0
  808. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/SMILES (#745)/Rule_based Row Splitter (#637)/settings.xml +71 -0
  809. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/SMILES (#745)/String Replacer (#639)/settings.xml +59 -0
  810. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/SMILES (#745)/workflow.knime +157 -0
  811. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Column Rename (#758)/settings.xml +57 -0
  812. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Joiner (#803)/settings.xml +83 -0
  813. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/CASE Switch Data _End_ (#728)/settings.xml +53 -0
  814. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/CASE Switch Data _Start_ (#725)/settings.xml +74 -0
  815. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/CASE Switch Data _Start_ (#735)/settings.xml +74 -0
  816. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/Column Filter (#715)/settings.xml +80 -0
  817. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/Column Filter (#729)/settings.xml +83 -0
  818. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/Column Filter (#738)/settings.xml +82 -0
  819. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/Column Filter (#739)/settings.xml +78 -0
  820. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/Column Filter (#808)/settings.xml +80 -0
  821. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/Column Rename (#740)/settings.xml +57 -0
  822. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/Concatenate _Optional in_ (#721)/settings.xml +55 -0
  823. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/End IF (#737)/settings.xml +53 -0
  824. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/Lite InChI (#683)/Concatenate _Optional in_ (#648)/settings.xml +55 -0
  825. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/Lite InChI (#683)/RDKit To InChI (#636)/settings.xml +105 -0
  826. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/Lite InChI (#683)/Rule_based Row Splitter (#639)/settings.xml +71 -0
  827. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/Lite InChI (#683)/Rule_based Row Splitter (#641)/settings.xml +71 -0
  828. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/Lite InChI (#683)/Rule_based Row Splitter (#644)/settings.xml +71 -0
  829. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/Lite InChI (#683)/String Manipulation (#640)/settings.xml +56 -0
  830. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/Lite InChI (#683)/String Manipulation (#645)/settings.xml +56 -0
  831. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/Lite InChI (#683)/workflow.knime +257 -0
  832. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/Merge Variables (#810)/settings.xml +49 -0
  833. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/RDKit Add Hs (#704)/settings.xml +65 -0
  834. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/RDKit Add Hs (#809)/settings.xml +65 -0
  835. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/RDKit Aromatizer (#705)/settings.xml +65 -0
  836. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/RDKit Canon SMILES (#811)/settings.xml +65 -0
  837. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/RDKit Chemical Transformation (#686)/settings.xml +75 -0
  838. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/RDKit From InChI (#736)/settings.xml +95 -0
  839. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/RDKit From Molecule (#710)/settings.xml +119 -0
  840. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/RDKit Kekulizer (#741)/settings.xml +65 -0
  841. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/RDKit Kekulizer (#807)/settings.xml +65 -0
  842. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/RDKit Salt Stripper (#703)/settings.xml +75 -0
  843. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/Row Splitter (#718)/settings.xml +60 -0
  844. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/Row Splitter (#745)/settings.xml +60 -0
  845. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/Table Creator (#709)/settings.xml +98 -0
  846. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/Table Creator (#743)/settings.xml +125 -0
  847. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/WrappedNode Input (#726)/settings.xml +182 -0
  848. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/WrappedNode Output (#746)/settings.xml +88 -0
  849. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/settings.xml +58 -0
  850. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/Standardize (#750)/workflow.knime +818 -0
  851. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Sanitize (#764)/workflow.knime +185 -0
  852. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/Table Validator (#731)/settings.xml +117 -0
  853. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Sinks (#766)/workflow.knime +289 -0
  854. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Compute Lite (#762)/Lite InChI (#751)/Concatenate _Optional in_ (#648)/settings.xml +55 -0
  855. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Compute Lite (#762)/Lite InChI (#751)/Concatenate _Optional in_ (#651)/settings.xml +55 -0
  856. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Compute Lite (#762)/Lite InChI (#751)/Rule_based Row Splitter (#639)/settings.xml +71 -0
  857. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Compute Lite (#762)/Lite InChI (#751)/Rule_based Row Splitter (#641)/settings.xml +71 -0
  858. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Compute Lite (#762)/Lite InChI (#751)/Rule_based Row Splitter (#644)/settings.xml +71 -0
  859. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Compute Lite (#762)/Lite InChI (#751)/Rule_based Row Splitter (#646)/settings.xml +71 -0
  860. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Compute Lite (#762)/Lite InChI (#751)/Rule_based Row Splitter (#649)/settings.xml +71 -0
  861. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Compute Lite (#762)/Lite InChI (#751)/String Manipulation (#640)/settings.xml +56 -0
  862. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Compute Lite (#762)/Lite InChI (#751)/String Manipulation (#645)/settings.xml +56 -0
  863. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Compute Lite (#762)/Lite InChI (#751)/String Manipulation (#647)/settings.xml +56 -0
  864. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Compute Lite (#762)/Lite InChI (#751)/String Manipulation (#650)/settings.xml +56 -0
  865. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Compute Lite (#762)/Lite InChI (#751)/workflow.knime +357 -0
  866. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Compute Lite (#762)/RDKit To InChI (#636)/settings.xml +105 -0
  867. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Compute Lite (#762)/Rule_based Row Splitter (#753)/settings.xml +71 -0
  868. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Compute Lite (#762)/workflow.knime +157 -0
  869. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/GroupBy (#760)/settings.xml +158 -0
  870. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/GroupBy (#765)/settings.xml +147 -0
  871. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Load as Rdki (#758)/Column Filter (#733)/settings.xml +79 -0
  872. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Load as Rdki (#758)/RDKit From InChI (#732)/settings.xml +95 -0
  873. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Load as Rdki (#758)/workflow.knime +135 -0
  874. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Pass only mo (#763)/Cell Splitter (#746)/settings.xml +62 -0
  875. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Pass only mo (#763)/Column Filter (#750)/settings.xml +83 -0
  876. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Pass only mo (#763)/Rule_based Row Splitter (#749)/settings.xml +71 -0
  877. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Pass only mo (#763)/workflow.knime +157 -0
  878. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/SMILES (#759)/RDKit Canon SMILES (#465)/settings.xml +65 -0
  879. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/SMILES (#759)/Rule_based Row Splitter (#637)/settings.xml +71 -0
  880. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/SMILES (#759)/String Replacer (#639)/settings.xml +59 -0
  881. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/SMILES (#759)/workflow.knime +157 -0
  882. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Column Rename (#758)/settings.xml +57 -0
  883. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Joiner (#803)/settings.xml +83 -0
  884. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/CASE Switch Data _End_ (#728)/settings.xml +53 -0
  885. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/CASE Switch Data _Start_ (#725)/settings.xml +74 -0
  886. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/CASE Switch Data _Start_ (#735)/settings.xml +74 -0
  887. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/Column Filter (#715)/settings.xml +80 -0
  888. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/Column Filter (#729)/settings.xml +83 -0
  889. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/Column Filter (#738)/settings.xml +82 -0
  890. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/Column Filter (#739)/settings.xml +78 -0
  891. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/Column Filter (#808)/settings.xml +80 -0
  892. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/Column Rename (#740)/settings.xml +57 -0
  893. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/Concatenate _Optional in_ (#721)/settings.xml +55 -0
  894. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/End IF (#737)/settings.xml +53 -0
  895. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/Lite InChI (#683)/Concatenate _Optional in_ (#648)/settings.xml +55 -0
  896. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/Lite InChI (#683)/RDKit To InChI (#636)/settings.xml +105 -0
  897. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/Lite InChI (#683)/Rule_based Row Splitter (#639)/settings.xml +71 -0
  898. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/Lite InChI (#683)/Rule_based Row Splitter (#641)/settings.xml +71 -0
  899. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/Lite InChI (#683)/Rule_based Row Splitter (#644)/settings.xml +71 -0
  900. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/Lite InChI (#683)/String Manipulation (#640)/settings.xml +56 -0
  901. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/Lite InChI (#683)/String Manipulation (#645)/settings.xml +56 -0
  902. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/Lite InChI (#683)/workflow.knime +257 -0
  903. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/Merge Variables (#810)/settings.xml +49 -0
  904. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/RDKit Add Hs (#704)/settings.xml +65 -0
  905. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/RDKit Add Hs (#809)/settings.xml +65 -0
  906. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/RDKit Aromatizer (#705)/settings.xml +65 -0
  907. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/RDKit Canon SMILES (#811)/settings.xml +65 -0
  908. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/RDKit Chemical Transformation (#686)/settings.xml +75 -0
  909. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/RDKit From InChI (#736)/settings.xml +95 -0
  910. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/RDKit From Molecule (#710)/settings.xml +119 -0
  911. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/RDKit Kekulizer (#741)/settings.xml +65 -0
  912. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/RDKit Kekulizer (#807)/settings.xml +65 -0
  913. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/RDKit Salt Stripper (#703)/settings.xml +75 -0
  914. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/Row Splitter (#718)/settings.xml +60 -0
  915. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/Row Splitter (#745)/settings.xml +60 -0
  916. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/Table Creator (#709)/settings.xml +98 -0
  917. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/Table Creator (#743)/settings.xml +125 -0
  918. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/WrappedNode Input (#726)/settings.xml +170 -0
  919. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/WrappedNode Output (#746)/settings.xml +88 -0
  920. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/settings.xml +58 -0
  921. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/Standardize (#750)/workflow.knime +818 -0
  922. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Sanitize (#766)/workflow.knime +185 -0
  923. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/Table Validator (#761)/settings.xml +117 -0
  924. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Parse Source (#767)/workflow.knime +289 -0
  925. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Read Cofacto (#795)/CASE Switch Data _End_ (#793)/settings.xml +53 -0
  926. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Read Cofacto (#795)/CASE Switch Variable _Start_ (#790)/settings.xml +74 -0
  927. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Read Cofacto (#795)/CSV Reader (#481)/settings.xml +68 -0
  928. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Read Cofacto (#795)/Rule Engine Variable (#789)/settings.xml +75 -0
  929. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Read Cofacto (#795)/Table Creator (#792)/settings.xml +89 -0
  930. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Read Cofacto (#795)/workflow.knime +207 -0
  931. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Read Sink (#794)/CASE Switch Data _End_ (#793)/settings.xml +53 -0
  932. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Read Sink (#794)/CASE Switch Variable _Start_ (#790)/settings.xml +74 -0
  933. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Read Sink (#794)/CSV Reader (#481)/settings.xml +68 -0
  934. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Read Sink (#794)/Rule Engine Variable (#789)/settings.xml +75 -0
  935. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Read Sink (#794)/Table Creator (#792)/settings.xml +89 -0
  936. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/Read Sink (#794)/workflow.knime +207 -0
  937. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/RowID (#786)/settings.xml +90 -0
  938. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Read Sources (#741)/workflow.knime +557 -0
  939. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Sink _ Sourc (#854)/Column Rename (#912)/settings.xml +57 -0
  940. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Sink _ Sourc (#854)/Ref table (#910)/Extract Column Header (#907)/settings.xml +69 -0
  941. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Sink _ Sourc (#854)/Ref table (#910)/Table Creator (#906)/settings.xml +113 -0
  942. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Sink _ Sourc (#854)/Ref table (#910)/Transpose (#908)/settings.xml +55 -0
  943. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Sink _ Sourc (#854)/Ref table (#910)/workflow.knime +152 -0
  944. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Sink _ Sourc (#854)/Reference Column Filter (#904)/settings.xml +60 -0
  945. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Sink _ Sourc (#854)/Reference Column Resorter (#905)/settings.xml +60 -0
  946. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Sink _ Sourc (#854)/Rule_based Row Filter (#776)/settings.xml +68 -0
  947. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Sink _ Sourc (#854)/workflow.knime +207 -0
  948. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Source in Si (#853)/Ref table (#910)/Extract Column Header (#907)/settings.xml +69 -0
  949. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Source in Si (#853)/Ref table (#910)/Table Creator (#906)/settings.xml +113 -0
  950. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Source in Si (#853)/Ref table (#910)/Transpose (#908)/settings.xml +55 -0
  951. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Source in Si (#853)/Ref table (#910)/workflow.knime +152 -0
  952. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Source in Si (#853)/Reference Column Filter (#904)/settings.xml +60 -0
  953. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Source in Si (#853)/Reference Column Resorter (#905)/settings.xml +60 -0
  954. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Source in Si (#853)/Rule_based Row Filter (#776)/settings.xml +67 -0
  955. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Source in Si (#853)/workflow.knime +185 -0
  956. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Source not i (#855)/Ref table (#910)/Extract Column Header (#907)/settings.xml +69 -0
  957. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Source not i (#855)/Ref table (#910)/Table Creator (#906)/settings.xml +113 -0
  958. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Source not i (#855)/Ref table (#910)/Transpose (#908)/settings.xml +55 -0
  959. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Source not i (#855)/Ref table (#910)/workflow.knime +152 -0
  960. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Source not i (#855)/Reference Column Filter (#904)/settings.xml +60 -0
  961. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Source not i (#855)/Reference Column Resorter (#905)/settings.xml +60 -0
  962. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Source not i (#855)/Rule_based Row Filter (#776)/settings.xml +67 -0
  963. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/Source not i (#855)/workflow.knime +185 -0
  964. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/WrappedNode Input (#865)/settings.xml +185 -0
  965. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/WrappedNode Output (#861)/settings.xml +103 -0
  966. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/settings.xml +63 -0
  967. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Source_ Sink (#938)/workflow.knime +217 -0
  968. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/UPDATE SOURC (#935)/Column Rename (#942)/settings.xml +57 -0
  969. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/UPDATE SOURC (#935)/Concatenate (#904)/settings.xml +55 -0
  970. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/UPDATE SOURC (#935)/GroupBy (#924)/settings.xml +178 -0
  971. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/UPDATE SOURC (#935)/Joiner (#922)/settings.xml +89 -0
  972. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/UPDATE SOURC (#935)/Joiner (#940)/settings.xml +89 -0
  973. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/UPDATE SOURC (#935)/Mass Filter (#920)/Column Filter (#918)/settings.xml +83 -0
  974. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/UPDATE SOURC (#935)/Mass Filter (#920)/RDKit Descriptor Calculation (#910)/settings.xml +67 -0
  975. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/UPDATE SOURC (#935)/Mass Filter (#920)/Rule_based Row Filter (#919)/settings.xml +67 -0
  976. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/UPDATE SOURC (#935)/Mass Filter (#920)/workflow.knime +179 -0
  977. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/UPDATE SOURC (#935)/Missing Value (#948)/settings.xml +86 -0
  978. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/UPDATE SOURC (#935)/Reference Row Splitter (#899)/settings.xml +70 -0
  979. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/UPDATE SOURC (#935)/RowID (#912)/settings.xml +90 -0
  980. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/UPDATE SOURC (#935)/Score Filter (#932)/Row Sampling (#688)/settings.xml +62 -0
  981. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/UPDATE SOURC (#935)/Score Filter (#932)/Sorter (#691)/settings.xml +60 -0
  982. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/UPDATE SOURC (#935)/Score Filter (#932)/workflow.knime +157 -0
  983. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/UPDATE SOURC (#935)/Set Operator (#896)/settings.xml +81 -0
  984. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/UPDATE SOURC (#935)/Table Validator (#944)/settings.xml +112 -0
  985. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/UPDATE SOURC (#935)/Table Validator (#945)/settings.xml +154 -0
  986. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/UPDATE SOURC (#935)/Table Validator (#947)/settings.xml +137 -0
  987. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/UPDATE SOURC (#935)/Ungroup (#921)/settings.xml +90 -0
  988. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/UPDATE SOURC (#935)/WrappedNode Input (#943)/settings.xml +142 -0
  989. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/UPDATE SOURC (#935)/WrappedNode Output (#939)/settings.xml +92 -0
  990. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/UPDATE SOURC (#935)/settings.xml +75 -0
  991. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/UPDATE SOURC (#935)/workflow.knime +525 -0
  992. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/WrappedNode Input (#1081)/settings.xml +405 -0
  993. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/WrappedNode Output (#1082)/settings.xml +72 -0
  994. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write Source (#1085)/Build csv pa (#1072)/Column Appender (#1075)/settings.xml +60 -0
  995. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write Source (#1085)/Build csv pa (#1072)/Java Snippet (#1073)/settings.xml +105 -0
  996. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write Source (#1085)/Build csv pa (#1072)/Table Row to Variable (#1076)/settings.xml +119 -0
  997. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write Source (#1085)/Build csv pa (#1072)/Variable to Table Row (#1070)/settings.xml +72 -0
  998. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write Source (#1085)/Build csv pa (#1072)/Variable to Table Row (#1074)/settings.xml +73 -0
  999. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write Source (#1085)/Build csv pa (#1072)/workflow.knime +225 -0
  1000. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write Source (#1085)/CSV Writer (#961)/settings.xml +74 -0
  1001. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write Source (#1085)/Column Filter (#966)/settings.xml +81 -0
  1002. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write Source (#1085)/Column Rename (#960)/settings.xml +57 -0
  1003. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write Source (#1085)/Column Resorter (#962)/settings.xml +68 -0
  1004. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write Source (#1085)/WrappedNode Input (#965)/settings.xml +142 -0
  1005. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write Source (#1085)/WrappedNode Output (#964)/settings.xml +68 -0
  1006. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write Source (#1085)/settings.xml +44 -0
  1007. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write Source (#1085)/workflow.knime +200 -0
  1008. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write global (#963)/Build csv pa (#1072)/Column Appender (#1075)/settings.xml +60 -0
  1009. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write global (#963)/Build csv pa (#1072)/Java Snippet (#1073)/settings.xml +105 -0
  1010. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write global (#963)/Build csv pa (#1072)/Table Row to Variable (#1076)/settings.xml +119 -0
  1011. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write global (#963)/Build csv pa (#1072)/Variable to Table Row (#1070)/settings.xml +73 -0
  1012. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write global (#963)/Build csv pa (#1072)/Variable to Table Row (#1074)/settings.xml +74 -0
  1013. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write global (#963)/Build csv pa (#1072)/workflow.knime +225 -0
  1014. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write global (#963)/CSV Writer (#961)/settings.xml +74 -0
  1015. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write global (#963)/Column Rename (#960)/settings.xml +72 -0
  1016. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write global (#963)/Column Resorter (#962)/settings.xml +68 -0
  1017. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write global (#963)/Constant Value Column (#966)/settings.xml +61 -0
  1018. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write global (#963)/String To Number (#967)/settings.xml +77 -0
  1019. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write global (#963)/WrappedNode Input (#965)/settings.xml +144 -0
  1020. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write global (#963)/WrappedNode Output (#964)/settings.xml +54 -0
  1021. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write global (#963)/settings.xml +44 -0
  1022. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write global (#963)/workflow.knime +228 -0
  1023. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Column Filter (#1060)/settings.xml +93 -0
  1024. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Empty Table Switch (#1082)/settings.xml +53 -0
  1025. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/GroupBy (#1061)/settings.xml +129 -0
  1026. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Table Row To Variable Loop Start (#1062)/settings.xml +77 -0
  1027. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Variable Loop End (#1074)/settings.xml +65 -0
  1028. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/WrappedNode Input (#1081)/settings.xml +114 -0
  1029. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/WrappedNode Output (#1079)/settings.xml +54 -0
  1030. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Build file n (#1072)/String Manipulation (#977)/settings.xml +56 -0
  1031. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Build file n (#1072)/Table Row to Variable (#1076)/settings.xml +70 -0
  1032. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Build file n (#1072)/Variable to Table Row (#1070)/settings.xml +96 -0
  1033. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Build file n (#1072)/workflow.knime +157 -0
  1034. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Constant Value Column (#1048)/settings.xml +61 -0
  1035. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/JSON Writer (#990)/settings.xml +58 -0
  1036. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/Column Combiner (#1082)/settings.xml +81 -0
  1037. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/Column Filter (#1011)/settings.xml +93 -0
  1038. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/Column Filter (#1025)/settings.xml +92 -0
  1039. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/Column Filter (#1029)/settings.xml +93 -0
  1040. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/Column Filter (#1041)/settings.xml +92 -0
  1041. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/Column Filter (#1077)/settings.xml +78 -0
  1042. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/Column Filter (#1078)/settings.xml +78 -0
  1043. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/Column Filter (#983)/settings.xml +93 -0
  1044. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/Column Filter (#992)/settings.xml +93 -0
  1045. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/Column Rename (#1031)/settings.xml +57 -0
  1046. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/Column Rename (#1035)/settings.xml +72 -0
  1047. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/Column Rename (#1044)/settings.xml +67 -0
  1048. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/Column Rename (#1074)/settings.xml +57 -0
  1049. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/Column Rename (#1076)/settings.xml +62 -0
  1050. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/Column Rename (#1080)/settings.xml +62 -0
  1051. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/Columns to JSON (#1036)/settings.xml +107 -0
  1052. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/Columns to JSON (#996)/settings.xml +96 -0
  1053. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/Concatenate (#1014)/settings.xml +55 -0
  1054. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/Concatenate (#1038)/settings.xml +55 -0
  1055. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/Concatenate (#1043)/settings.xml +55 -0
  1056. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/Concatenate (#998)/settings.xml +55 -0
  1057. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/Constant Value Column (#1005)/settings.xml +55 -0
  1058. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/Constant Value Column (#1006)/settings.xml +55 -0
  1059. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/Constant Value Column (#1030)/settings.xml +55 -0
  1060. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/Constant Value Column (#1034)/settings.xml +55 -0
  1061. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/Constant Value Column (#1042)/settings.xml +55 -0
  1062. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/Constant Value Column (#1085)/settings.xml +55 -0
  1063. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/Constant Value Column (#1086)/settings.xml +55 -0
  1064. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/Create Collection Column (#1088)/settings.xml +106 -0
  1065. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/GroupBy (#1033)/settings.xml +164 -0
  1066. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/GroupBy (#1081)/settings.xml +122 -0
  1067. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/GroupBy (#989)/settings.xml +175 -0
  1068. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/InChIKey (#1098)/Column Rename (#1095)/settings.xml +51 -0
  1069. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/InChIKey (#1098)/Joiner (#1100)/settings.xml +87 -0
  1070. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/InChIKey (#1098)/Molecule Type Cast (#1098)/settings.xml +52 -0
  1071. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/InChIKey (#1098)/RDKit From Molecule (#1097)/settings.xml +119 -0
  1072. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/InChIKey (#1098)/RDKit To InChI (#1099)/settings.xml +105 -0
  1073. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/InChIKey (#1098)/workflow.knime +216 -0
  1074. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/InChIKey (#1099)/Column Rename (#1101)/settings.xml +57 -0
  1075. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/InChIKey (#1099)/Joiner (#1100)/settings.xml +87 -0
  1076. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/InChIKey (#1099)/Molecule Type Cast (#1098)/settings.xml +52 -0
  1077. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/InChIKey (#1099)/RDKit From Molecule (#1097)/settings.xml +119 -0
  1078. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/InChIKey (#1099)/RDKit To InChI (#1099)/settings.xml +105 -0
  1079. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/InChIKey (#1099)/workflow.knime +216 -0
  1080. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/InChIKey (#1100)/Column Rename (#1101)/settings.xml +57 -0
  1081. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/InChIKey (#1100)/Joiner (#1100)/settings.xml +84 -0
  1082. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/InChIKey (#1100)/Molecule Type Cast (#1098)/settings.xml +52 -0
  1083. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/InChIKey (#1100)/RDKit From Molecule (#1097)/settings.xml +119 -0
  1084. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/InChIKey (#1100)/RDKit To InChI (#1099)/settings.xml +105 -0
  1085. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/InChIKey (#1100)/workflow.knime +216 -0
  1086. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/JSON Row Combiner (#1037)/settings.xml +63 -0
  1087. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/JSON Row Combiner (#997)/settings.xml +63 -0
  1088. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/JSON Row Combiner (#999)/settings.xml +63 -0
  1089. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/Rule Engine (#1084)/settings.xml +63 -0
  1090. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/Rule Engine (#1087)/settings.xml +62 -0
  1091. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/Prepare json (#1083)/workflow.knime +977 -0
  1092. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/RowID (#1047)/settings.xml +90 -0
  1093. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Make JSON (#1075)/workflow.knime +245 -0
  1094. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Merge Variables (#1076)/settings.xml +49 -0
  1095. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Rule_based Row Filter (#1065)/settings.xml +67 -0
  1096. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Sanitize sou (#1067)/String Manipulation (#994)/settings.xml +56 -0
  1097. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Sanitize sou (#1067)/String Manipulation (#995)/settings.xml +56 -0
  1098. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Sanitize sou (#1067)/Table Row to Variable (#978)/settings.xml +70 -0
  1099. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Sanitize sou (#1067)/Variable to Table Row (#996)/settings.xml +95 -0
  1100. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Sanitize sou (#1067)/workflow.knime +179 -0
  1101. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/WrappedNode Input (#1077)/settings.xml +120 -0
  1102. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/WrappedNode Output (#1078)/settings.xml +77 -0
  1103. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Write as CSV (#1073)/Build csv pa (#1072)/Column Appender (#1075)/settings.xml +60 -0
  1104. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Write as CSV (#1073)/Build csv pa (#1072)/Java Snippet (#1073)/settings.xml +105 -0
  1105. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Write as CSV (#1073)/Build csv pa (#1072)/String Manipulation (#977)/settings.xml +56 -0
  1106. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Write as CSV (#1073)/Build csv pa (#1072)/Table Row to Variable (#1076)/settings.xml +70 -0
  1107. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Write as CSV (#1073)/Build csv pa (#1072)/Variable to Table Row (#1070)/settings.xml +96 -0
  1108. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Write as CSV (#1073)/Build csv pa (#1072)/Variable to Table Row (#1074)/settings.xml +75 -0
  1109. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Write as CSV (#1073)/Build csv pa (#1072)/workflow.knime +254 -0
  1110. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Write as CSV (#1073)/CSV Writer (#961)/settings.xml +74 -0
  1111. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Write as CSV (#1073)/Column Filter (#1066)/settings.xml +92 -0
  1112. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Write as CSV (#1073)/Column Rename (#960)/settings.xml +72 -0
  1113. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Write as CSV (#1073)/Column Resorter (#962)/settings.xml +68 -0
  1114. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Write as CSV (#1073)/workflow.knime +236 -0
  1115. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Write depict (#1053)/Column Filter (#1029)/settings.xml +79 -0
  1116. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Write depict (#1053)/Column Filter (#1041)/settings.xml +79 -0
  1117. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Write depict (#1053)/Column Filter (#983)/settings.xml +93 -0
  1118. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Write depict (#1053)/Column Rename (#1035)/settings.xml +62 -0
  1119. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Write depict (#1053)/Column Rename (#1044)/settings.xml +62 -0
  1120. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Write depict (#1053)/Concatenate (#1043)/settings.xml +55 -0
  1121. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Write depict (#1053)/Create Directory (#1074)/settings.xml +60 -0
  1122. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Write depict (#1053)/GroupBy (#1033)/settings.xml +129 -0
  1123. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Write depict (#1053)/Image Column Writer (#1023)/settings.xml +66 -0
  1124. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Write depict (#1053)/InChIKey and (#1097)/Column Rename (#1095)/settings.xml +51 -0
  1125. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Write depict (#1053)/InChIKey and (#1097)/Joiner (#1100)/settings.xml +85 -0
  1126. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Write depict (#1053)/InChIKey and (#1097)/Molecule Type Cast (#1098)/settings.xml +52 -0
  1127. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Write depict (#1053)/InChIKey and (#1097)/RDKit From Molecule (#1097)/settings.xml +119 -0
  1128. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Write depict (#1053)/InChIKey and (#1097)/RDKit To InChI (#1099)/settings.xml +105 -0
  1129. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Write depict (#1053)/InChIKey and (#1097)/workflow.knime +216 -0
  1130. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Write depict (#1053)/Renderer to Image (#1079)/settings.xml +57 -0
  1131. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Write depict (#1053)/RowID (#1040)/settings.xml +90 -0
  1132. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/Write depict (#1053)/workflow.knime +392 -0
  1133. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/settings.xml +57 -0
  1134. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/Write csv_ j (#1077)/workflow.knime +279 -0
  1135. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/settings.xml +44 -0
  1136. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/Write per so (#1079)/workflow.knime +228 -0
  1137. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/settings.xml +44 -0
  1138. data/test/fixtures/workflow-0.2.0/workflow/Core (#1081)/workflow.knime +887 -0
  1139. data/test/fixtures/workflow-0.2.0/workflow/Input config (#740)/File Upload (#765)/settings.xml +81 -0
  1140. data/test/fixtures/workflow-0.2.0/workflow/Input config (#740)/File Upload (#766)/settings.xml +81 -0
  1141. data/test/fixtures/workflow-0.2.0/workflow/Input config (#740)/File Upload (#767)/settings.xml +89 -0
  1142. data/test/fixtures/workflow-0.2.0/workflow/Input config (#740)/Integer Input (#745)/settings.xml +80 -0
  1143. data/test/fixtures/workflow-0.2.0/workflow/Input config (#740)/Integer Input (#747)/settings.xml +80 -0
  1144. data/test/fixtures/workflow-0.2.0/workflow/Input config (#740)/Integer Input (#748)/settings.xml +80 -0
  1145. data/test/fixtures/workflow-0.2.0/workflow/Input config (#740)/Integer Input (#749)/settings.xml +80 -0
  1146. data/test/fixtures/workflow-0.2.0/workflow/Input config (#740)/Integer Input (#755)/settings.xml +80 -0
  1147. data/test/fixtures/workflow-0.2.0/workflow/Input config (#740)/Integer Input (#756)/settings.xml +80 -0
  1148. data/test/fixtures/workflow-0.2.0/workflow/Input config (#740)/Merge Variables (#741)/settings.xml +49 -0
  1149. data/test/fixtures/workflow-0.2.0/workflow/Input config (#740)/Merge Variables (#746)/settings.xml +49 -0
  1150. data/test/fixtures/workflow-0.2.0/workflow/Input config (#740)/Merge Variables (#750)/settings.xml +49 -0
  1151. data/test/fixtures/workflow-0.2.0/workflow/Input config (#740)/Merge Variables (#752)/settings.xml +49 -0
  1152. data/test/fixtures/workflow-0.2.0/workflow/Input config (#740)/Merge Variables (#760)/settings.xml +49 -0
  1153. data/test/fixtures/workflow-0.2.0/workflow/Input config (#740)/Merge Variables (#761)/settings.xml +49 -0
  1154. data/test/fixtures/workflow-0.2.0/workflow/Input config (#740)/Merge Variables (#762)/settings.xml +49 -0
  1155. data/test/fixtures/workflow-0.2.0/workflow/Input config (#740)/Merge Variables (#768)/settings.xml +49 -0
  1156. data/test/fixtures/workflow-0.2.0/workflow/Input config (#740)/Single Selection (#732)/settings.xml +90 -0
  1157. data/test/fixtures/workflow-0.2.0/workflow/Input config (#740)/Single Selection (#734)/settings.xml +90 -0
  1158. data/test/fixtures/workflow-0.2.0/workflow/Input config (#740)/String Input (#744)/settings.xml +81 -0
  1159. data/test/fixtures/workflow-0.2.0/workflow/Input config (#740)/String Manipulation _Variable_ (#769)/settings.xml +63 -0
  1160. data/test/fixtures/workflow-0.2.0/workflow/Input config (#740)/String Manipulation _Variable_ (#770)/settings.xml +63 -0
  1161. data/test/fixtures/workflow-0.2.0/workflow/Input config (#740)/WrappedNode Input (#710)/settings.xml +157 -0
  1162. data/test/fixtures/workflow-0.2.0/workflow/Input config (#740)/WrappedNode Output (#764)/settings.xml +105 -0
  1163. data/test/fixtures/workflow-0.2.0/workflow/Input config (#740)/settings.xml +42 -0
  1164. data/test/fixtures/workflow-0.2.0/workflow/Input config (#740)/workflow.knime +1011 -0
  1165. data/test/fixtures/workflow-0.2.0/workflow/Output confi (#959)/File Upload (#767)/settings.xml +89 -0
  1166. data/test/fixtures/workflow-0.2.0/workflow/Output confi (#959)/Merge Variables (#741)/settings.xml +49 -0
  1167. data/test/fixtures/workflow-0.2.0/workflow/Output confi (#959)/String Input (#771)/settings.xml +81 -0
  1168. data/test/fixtures/workflow-0.2.0/workflow/Output confi (#959)/String Input (#772)/settings.xml +81 -0
  1169. data/test/fixtures/workflow-0.2.0/workflow/Output confi (#959)/WrappedNode Input (#710)/settings.xml +107 -0
  1170. data/test/fixtures/workflow-0.2.0/workflow/Output confi (#959)/WrappedNode Output (#764)/settings.xml +83 -0
  1171. data/test/fixtures/workflow-0.2.0/workflow/Output confi (#959)/settings.xml +38 -0
  1172. data/test/fixtures/workflow-0.2.0/workflow/Output confi (#959)/workflow.knime +306 -0
  1173. data/test/fixtures/workflow-0.2.0/workflow/workflow.knime +443 -0
  1174. data/test/fixtures/workflow-0.2.0/workflow/workflow.svg +877 -0
  1175. data/test/fixtures/workflow-0.2.0/workflow/workflowset.meta +5 -0
  1176. data/test/reader_test.rb +164 -0
  1177. data/test/test_helper.rb +10 -0
  1178. data/test/writer_test.rb +102 -0
  1179. metadata +2418 -0
data/test/fixtures/workflow-0.2.0/workflow/workflow.svg ADDED
@@ -0,0 +1,877 @@
1
+ <?xml version="1.0" encoding="UTF-8"?>
2
+ <svg stroke-dasharray="none" shape-rendering="auto"
3
+ xmlns="http://www.w3.org/2000/svg" font-family="&apos;Dialog&apos;"
4
+ width="999" text-rendering="auto" fill-opacity="1"
5
+ contentScriptType="text/ecmascript" color-interpolation="auto"
6
+ color-rendering="auto" preserveAspectRatio="xMidYMid meet" font-size="12"
7
+ fill="black" xmlns:xlink="http://www.w3.org/1999/xlink" stroke="black"
8
+ image-rendering="auto" stroke-miterlimit="10" zoomAndPan="magnify"
9
+ version="1.0" stroke-linecap="square" stroke-linejoin="miter"
10
+ contentStyleType="text/css" font-style="normal" height="2225"
11
+ stroke-width="1" stroke-dashoffset="0" font-weight="normal"
12
+ stroke-opacity="1">
13
+ <!--Generated by the Batik Graphics2D SVG Generator-->
14
+ <defs id="genericDefs"/>
15
+ <g>
16
+ <defs id="defs1">
17
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath1">
18
+ <path d="M-1 -1 L662 -1 L662 942 L-1 942 L-1 -1 Z"/>
19
+ </clipPath>
20
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath2">
21
+ <path d="M-1 -1 L81 -1 L81 14 L-1 14 L-1 -1 Z"/>
22
+ </clipPath>
23
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath3">
24
+ <path d="M-1 -1 L662 -1 L662 159 L-1 159 L-1 -1 Z"/>
25
+ </clipPath>
26
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath4">
27
+ <path d="M-1 144 L93 144 L93 159 L-1 159 L-1 144 Z"/>
28
+ </clipPath>
29
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath5">
30
+ <path d="M-1 144 L126 144 L126 184 L-1 184 L-1 144 Z"/>
31
+ </clipPath>
32
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath6">
33
+ <path d="M108 169 L224 169 L224 184 L108 184 L108 169 Z"/>
34
+ </clipPath>
35
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath7">
36
+ <path d="M-1 169 L662 169 L662 221 L-1 221 L-1 169 Z"/>
37
+ </clipPath>
38
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath8">
39
+ <path d="M108 206 L236 206 L236 221 L108 221 L108 206 Z"/>
40
+ </clipPath>
41
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath9">
42
+ <path d="M-1 206 L662 206 L662 258 L-1 258 L-1 206 Z"/>
43
+ </clipPath>
44
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath10">
45
+ <path d="M99 243 L129 243 L129 258 L99 258 L99 243 Z"/>
46
+ </clipPath>
47
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath11">
48
+ <path d="M-1 243 L662 243 L662 331 L-1 331 L-1 243 Z"/>
49
+ </clipPath>
50
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath12">
51
+ <path d="M-1 316 L127 316 L127 331 L-1 331 L-1 316 Z"/>
52
+ </clipPath>
53
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath13">
54
+ <path d="M-1 316 L662 316 L662 379 L-1 379 L-1 316 Z"/>
55
+ </clipPath>
56
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath14">
57
+ <path d="M-1 377 L179 377 L179 392 L-1 392 L-1 377 Z"/>
58
+ </clipPath>
59
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath15">
60
+ <path d="M-1 377 L443 377 L443 441 L-1 441 L-1 377 Z"/>
61
+ </clipPath>
62
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath16">
63
+ <path d="M-1 426 L56 426 L56 441 L-1 441 L-1 426 Z"/>
64
+ </clipPath>
65
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath17">
66
+ <path d="M-1 426 L117 426 L117 466 L-1 466 L-1 426 Z"/>
67
+ </clipPath>
68
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath18">
69
+ <path d="M-1 451 L70 451 L70 466 L-1 466 L-1 451 Z"/>
70
+ </clipPath>
71
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath19">
72
+ <path d="M-1 451 L662 451 L662 514 L-1 514 L-1 451 Z"/>
73
+ </clipPath>
74
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath20">
75
+ <path d="M-1 500 L253 500 L253 551 L-1 551 L-1 500 Z"/>
76
+ </clipPath>
77
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath21">
78
+ <path d="M-1 536 L277 536 L277 551 L-1 551 L-1 536 Z"/>
79
+ </clipPath>
80
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath22">
81
+ <path d="M-1 549 L662 549 L662 577 L-1 577 L-1 549 Z"/>
82
+ </clipPath>
83
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath23">
84
+ <path d="M-1 979 L682 979 L682 2226 L-1 2226 L-1 979 Z"/>
85
+ </clipPath>
86
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath24">
87
+ <path d="M4 984 L677 984 L677 1718 L4 1718 L4 984 Z"/>
88
+ </clipPath>
89
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath25">
90
+ <path d="M748 479 L1000 479 L1000 621 L748 621 L748 479 Z"/>
91
+ </clipPath>
92
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath26">
93
+ <path d="M758 489 L952 489 L952 503 L758 503 L758 489 Z"/>
94
+ </clipPath>
95
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath27">
96
+ <path d="M764 42 L877 42 L877 57 L764 57 L764 42 Z"/>
97
+ </clipPath>
98
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath28">
99
+ <path d="M-1 -1 L33 -1 L33 33 L-1 33 L-1 -1 Z"/>
100
+ </clipPath>
101
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath29">
102
+ <path d="M-1 -1 L17 -1 L17 17 L-1 17 L-1 -1 Z"/>
103
+ </clipPath>
104
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath30">
105
+ <path d="M-1 -1 L33 -1 L33 13 L-1 13 L-1 -1 Z"/>
106
+ </clipPath>
107
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath31">
108
+ <path d="M829 73 L877 73 L877 84 L829 84 L829 73 Z"/>
109
+ </clipPath>
110
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath32">
111
+ <path d="M-2 4 L46 4 L46 15 L-2 15 L-2 4 Z"/>
112
+ </clipPath>
113
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath33">
114
+ <path d="M799 149 L841 149 L841 164 L799 164 L799 149 Z"/>
115
+ </clipPath>
116
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath34">
117
+ <path d="M780 162 L860 162 L860 177 L780 177 L780 162 Z"/>
118
+ </clipPath>
119
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath35">
120
+ <path d="M828 193 L860 193 L860 204 L828 204 L828 193 Z"/>
121
+ </clipPath>
122
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath36">
123
+ <path d="M925 102 L955 102 L955 117 L925 117 L925 102 Z"/>
124
+ </clipPath>
125
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath37">
126
+ <path d="M914 123 L932 123 L932 134 L914 134 L914 123 Z"/>
127
+ </clipPath>
128
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath38">
129
+ <path d="M914 142 L932 142 L932 153 L914 153 L914 142 Z"/>
130
+ </clipPath>
131
+ <clipPath clipPathUnits="userSpaceOnUse" id="clipPath39">
132
+ <path d="M-1 -1 L1000 -1 L1000 2346 L-1 2346 L-1 -1 Z"/>
133
+ </clipPath>
134
+ </defs>
135
+ <g font-size="11" fill="white" stroke-linejoin="round" stroke="white"
136
+ stroke-width="0" stroke-miterlimit="0">
137
+ <rect x="0" y="0" clip-path="url(#clipPath1)" width="661"
138
+ height="941" stroke="none"/>
139
+ <text x="0" y="11" clip-path="url(#clipPath2)" fill="black"
140
+ stroke="none" font-weight="bold" xml:space="preserve">RetroPath2.0</text><text x="0"
141
+ y="35" clip-path="url(#clipPath3)" fill="black"
142
+ font-family="&apos;Arial&apos;" stroke="none"
143
+ xml:space="preserve">The RetroPath2.0 workflow build a reaction network from a set of source compounds to a set of sink compounds.</text><text x="0"
144
+ y="59" clip-path="url(#clipPath3)" fill="black"
145
+ font-family="&apos;Arial&apos;" stroke="none"
146
+ xml:space="preserve">When applied in a retrosynthetic fashion, the source is composed of the target compounds and the sink is composed of the available</text><text x="0"
147
+ y="71" clip-path="url(#clipPath3)" fill="black"
148
+ font-family="&apos;Arial&apos;" stroke="none"
149
+ xml:space="preserve">reactants (for instance in the context of metabolic engineering the sink is the set of native metabolites of a chassis strain). From</text><text x="0"
150
+ y="83" clip-path="url(#clipPath3)" fill="black"
151
+ font-family="&apos;Arial&apos;" stroke="none"
152
+ xml:space="preserve">amongst all the chemical reactions generated using RetroPath2.0 (in the retrosynthetic way), only a subset may effectively link a source</text><text x="0"
153
+ y="95" clip-path="url(#clipPath3)" fill="black"
154
+ font-family="&apos;Arial&apos;" stroke="none"
155
+ xml:space="preserve">to a subset of sink compounds. This sub-network is considered as a scope and is output in dedicated files (see below).</text><text x="0"
156
+ y="119" clip-path="url(#clipPath3)" fill="black"
157
+ font-family="&apos;Arial&apos;" stroke="none"
158
+ xml:space="preserve">The workflow handles both monomolecular (1 substrate) and bimolecular (2 substrates) reactions.</text><text x="0"
159
+ y="156" clip-path="url(#clipPath4)" fill="black" stroke="none"
160
+ font-weight="bold" xml:space="preserve">Getting started</text><text x="0"
161
+ y="181" clip-path="url(#clipPath5)" fill="black"
162
+ font-family="&apos;Arial&apos;" stroke="none"
163
+ xml:space="preserve">1. Double click on the </text><text x="109"
164
+ y="181" clip-path="url(#clipPath6)" fill="black" stroke="none"
165
+ font-weight="bold" xml:space="preserve">Input configuration</text><text x="209"
166
+ y="181" clip-path="url(#clipPath7)" fill="black"
167
+ font-family="&apos;Arial&apos;" stroke="none"
168
+ xml:space="preserve"> node and set appropriate values. Please refer to the embedded help panel for specification</text><text x="0"
169
+ y="193" clip-path="url(#clipPath7)" fill="black"
170
+ font-family="&apos;Arial&apos;" stroke="none"
171
+ xml:space="preserve">on input files and parameters (&quot;question mark&quot; button at the bottom of the Input configuration panel).</text><text x="0"
172
+ y="218" clip-path="url(#clipPath7)" fill="black"
173
+ font-family="&apos;Arial&apos;" stroke="none"
174
+ xml:space="preserve">2. Double click on the </text><text x="109"
175
+ y="218" clip-path="url(#clipPath8)" fill="black" stroke="none"
176
+ font-weight="bold" xml:space="preserve">Output configuration</text><text x="219"
177
+ y="218" clip-path="url(#clipPath9)" fill="black"
178
+ font-family="&apos;Arial&apos;" stroke="none"
179
+ xml:space="preserve"> node and set appropriate values. Please refer to the embedded help panel for dedicated</text><text x="0"
180
+ y="230" clip-path="url(#clipPath9)" fill="black"
181
+ font-family="&apos;Arial&apos;" stroke="none"
182
+ xml:space="preserve">information. (&quot;question mark&quot; button at the bottom of the Output configuration panel).</text><text x="0"
183
+ y="255" clip-path="url(#clipPath9)" fill="black"
184
+ font-family="&apos;Arial&apos;" stroke="none"
185
+ xml:space="preserve">3. Right click on the </text><text x="100"
186
+ y="255" clip-path="url(#clipPath10)" fill="black"
187
+ stroke="none" font-weight="bold" xml:space="preserve">Core</text><text x="125"
188
+ y="255" clip-path="url(#clipPath11)" fill="black"
189
+ font-family="&apos;Arial&apos;" stroke="none"
190
+ xml:space="preserve"> node and select &quot;Execute&quot;. A green dot will appear under the Core node on successful execution.</text><text x="0"
191
+ y="279" clip-path="url(#clipPath11)" fill="black"
192
+ font-family="&apos;Arial&apos;" stroke="none"
193
+ xml:space="preserve">4. In order to investigate any scope found, please use the &quot;scope.html&quot; file: open it with a web browser and follow the instructions</text><text x="0"
194
+ y="291" clip-path="url(#clipPath11)" fill="black"
195
+ font-family="&apos;Arial&apos;" stroke="none"
196
+ xml:space="preserve">displayed (Firefox or Google Chrome recommended).</text><text x="0"
197
+ y="328" clip-path="url(#clipPath12)" fill="black"
198
+ stroke="none" font-weight="bold" xml:space="preserve">Usage specifications</text><text x="0"
199
+ y="340" clip-path="url(#clipPath13)" fill="black"
200
+ font-family="&apos;Arial&apos;" stroke="none"
201
+ xml:space="preserve">- RetroPath2.0 current release is compatible starting from version 3.3.6 of Knime Analytics Platform. Check older RetroPath2.0 release</text><text x="0"
202
+ y="352" clip-path="url(#clipPath13)" fill="black"
203
+ font-family="&apos;Arial&apos;" stroke="none"
204
+ xml:space="preserve">for using it with older version of KNIME.</text><text x="0"
205
+ y="389" clip-path="url(#clipPath14)" fill="black"
206
+ stroke="none" font-weight="bold" xml:space="preserve">Limitations as of 2018/07/30</text><text x="0"
207
+ y="401" clip-path="url(#clipPath15)" fill="black"
208
+ font-family="&apos;Arial&apos;" stroke="none"
209
+ xml:space="preserve">- Scope is only relevant for retrosynthetic usage (target/source to chassis/sink).</text><text x="0"
210
+ y="438" clip-path="url(#clipPath16)" fill="black"
211
+ stroke="none" font-weight="bold" xml:space="preserve">Release: </text><text x="48"
212
+ y="438" clip-path="url(#clipPath17)" fill="black"
213
+ font-family="&apos;Arial&apos;" stroke="none"
214
+ xml:space="preserve">r20180730</text><text x="0" y="463"
215
+ clip-path="url(#clipPath18)" fill="black" stroke="none"
216
+ font-weight="bold" xml:space="preserve">How to cite</text><text x="0"
217
+ y="475" clip-path="url(#clipPath19)" fill="black"
218
+ font-family="&apos;Arial&apos;" stroke="none"
219
+ xml:space="preserve">Delépine B, Duigou T, Carbonell P, Faulon JL. RetroPath2.0: A retrosynthesis workflow for metabolic engineers. Metabolic Engineering</text><text x="0"
220
+ y="487" clip-path="url(#clipPath19)" fill="black"
221
+ font-family="&apos;Arial&apos;" stroke="none"
222
+ xml:space="preserve">(2017). DOI: https://doi.org/10.1016/j.ymben.2017.12.002</text><text x="0"
223
+ y="511" clip-path="url(#clipPath19)" fill="black"
224
+ font-family="&apos;Arial&apos;" stroke="none"
225
+ xml:space="preserve">Please report bugs to thomas.duigou@inra.fr</text>
226
+ </g><g font-size="11" font-family="&apos;Arial&apos;"
227
+ stroke-linejoin="round" font-weight="bold" stroke-width="0"
228
+ stroke-miterlimit="0">
229
+ <text xml:space="preserve" x="0" y="535"
230
+ clip-path="url(#clipPath20)" stroke="none">Worfklow Licence: CC BY-NC-SA</text><text x="0"
231
+ y="548" clip-path="url(#clipPath21)"
232
+ font-family="&apos;Dialog&apos;" stroke="none"
233
+ font-weight="normal" xml:space="preserve">T Duigou, B Delépine, JL Faulon, 2017-2018.</text><text x="0"
234
+ y="561" clip-path="url(#clipPath22)"
235
+ font-family="&apos;Dialog&apos;" stroke="none"
236
+ font-weight="normal" xml:space="preserve">This work is licensed under the Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License. To view</text><text x="0"
237
+ y="574" clip-path="url(#clipPath22)"
238
+ font-family="&apos;Dialog&apos;" stroke="none"
239
+ font-weight="normal" xml:space="preserve">a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/4.0/.</text>
240
+ </g><g font-size="11" fill="white" stroke-linejoin="round"
241
+ stroke="white" stroke-width="0" stroke-miterlimit="0">
242
+ <rect x="0" y="980" clip-path="url(#clipPath23)" width="681"
243
+ height="1245" stroke="none"/>
244
+ <text x="5" y="995" clip-path="url(#clipPath24)" fill="black"
245
+ font-family="&apos;Arial&apos;" stroke="none"
246
+ xml:space="preserve">Dev/Advanced user features:</text><text x="5"
247
+ y="1019" clip-path="url(#clipPath24)" fill="black"
248
+ font-family="&apos;Arial&apos;" stroke="none"
249
+ xml:space="preserve">The features below are activable through the global workflow variables pane.</text><text x="5"
250
+ y="1043" clip-path="url(#clipPath24)" fill="black"
251
+ font-family="&apos;Arial&apos;" stroke="none"
252
+ xml:space="preserve">#== Use the &quot;Fire&quot; Python Snippet for firing rules</text><text x="5"
253
+ y="1067" clip-path="url(#clipPath24)" fill="black"
254
+ font-family="&apos;Arial&apos;" stroke="none"
255
+ xml:space="preserve">A python snippet is embedded into the workflow allowing an enhanced way of firing rules. The &quot;Fire&quot; python snippet allows one to</text><text x="5"
256
+ y="1079" clip-path="url(#clipPath24)" fill="black"
257
+ font-family="&apos;Arial&apos;" stroke="none"
258
+ xml:space="preserve">compute bigger metabolic maps thanks to a drastically improved memory management. This feature can be enabled at the cost of some</text><text x="5"
259
+ y="1091" clip-path="url(#clipPath24)" fill="black"
260
+ font-family="&apos;Arial&apos;" stroke="none"
261
+ xml:space="preserve">python dependancies (see below) and is available for Linux systems.</text><text x="5"
262
+ y="1115" clip-path="url(#clipPath24)" fill="black"
263
+ font-family="&apos;Arial&apos;" stroke="none"
264
+ xml:space="preserve">Set the &quot;dev.use-py-fire&quot; global workflow variable to 1 in order to enable the feature. Timeout and multihreading settings are adjustable</text><text x="5"
265
+ y="1127" clip-path="url(#clipPath24)" fill="black"
266
+ font-family="&apos;Arial&apos;" stroke="none"
267
+ xml:space="preserve">using the &quot;dev.py-fire-timeout&quot; and &quot;dev.py-fire-procs&quot;, respectively.</text><text x="5"
268
+ y="1151" clip-path="url(#clipPath24)" fill="black"
269
+ font-family="&apos;Arial&apos;" stroke="none"
270
+ xml:space="preserve">Setting up the python environment assuming you are using conda for managing python environments (https://www.continuum.io):</text><text x="5"
271
+ y="1175" clip-path="url(#clipPath24)" fill="black"
272
+ font-family="&apos;Arial&apos;" stroke="none"
273
+ xml:space="preserve">1) Create the environment and install packages:</text><text x="5"
274
+ y="1199" clip-path="url(#clipPath24)" fill="black"
275
+ font-family="&apos;Arial&apos;" stroke="none"
276
+ xml:space="preserve">conda create --name pyknime python=2.7</text><text x="5"
277
+ y="1211" clip-path="url(#clipPath24)" fill="black"
278
+ font-family="&apos;Arial&apos;" stroke="none"
279
+ xml:space="preserve">source activate pyknime</text><text x="5"
280
+ y="1223" clip-path="url(#clipPath24)" fill="black"
281
+ font-family="&apos;Arial&apos;" stroke="none"
282
+ xml:space="preserve">conda install --channel rdkit rdkit # Please use rdkit release 2016.03.1 or later</text><text x="5"
283
+ y="1235" clip-path="url(#clipPath24)" fill="black"
284
+ font-family="&apos;Arial&apos;" stroke="none"
285
+ xml:space="preserve">conda install pandas protobuf psutil</text><text x="5"
286
+ y="1259" clip-path="url(#clipPath24)" fill="black"
287
+ font-family="&apos;Arial&apos;" stroke="none"
288
+ xml:space="preserve">2) Get the python path</text><text x="5"
289
+ y="1283" clip-path="url(#clipPath24)" fill="black"
290
+ font-family="&apos;Arial&apos;" stroke="none"
291
+ xml:space="preserve">source activate test</text><text x="5"
292
+ y="1295" clip-path="url(#clipPath24)" fill="black"
293
+ font-family="&apos;Arial&apos;" stroke="none"
294
+ xml:space="preserve">which python</text><text x="5" y="1319"
295
+ clip-path="url(#clipPath24)" fill="black"
296
+ font-family="&apos;Arial&apos;" stroke="none"
297
+ xml:space="preserve">3) Set this python path into Knime settings</text><text x="5"
298
+ y="1331" clip-path="url(#clipPath24)" fill="black"
299
+ font-family="&apos;Arial&apos;" stroke="none"
300
+ xml:space="preserve">For more details: https://www.knime.org/blog/how-to-setup-the-python-extension</text><text x="5"
301
+ y="1355" clip-path="url(#clipPath24)" fill="black"
302
+ font-family="&apos;Arial&apos;" stroke="none"
303
+ xml:space="preserve">4) Restart Knime</text><text x="5"
304
+ y="1391" clip-path="url(#clipPath24)" fill="black"
305
+ font-family="&apos;Arial&apos;" stroke="none"
306
+ xml:space="preserve">#== Disable Scope filters</text><text x="5"
307
+ y="1415" clip-path="url(#clipPath24)" fill="black"
308
+ font-family="&apos;Arial&apos;" stroke="none"
309
+ xml:space="preserve">The scope computation involves several heuristic filters in order to remove undesirable reactions. Such highly undesirable reactions are</text><text x="5"
310
+ y="1427" clip-path="url(#clipPath24)" fill="black"
311
+ font-family="&apos;Arial&apos;" stroke="none"
312
+ xml:space="preserve">those promoting metabolic loops increasing the connectivity of metabolic graphs.</text><text x="5"
313
+ y="1451" clip-path="url(#clipPath24)" fill="black"
314
+ font-family="&apos;Arial&apos;" stroke="none"
315
+ xml:space="preserve">One can disable these filters using the (i) &quot;dev.scope-filter-stepback&quot;, (ii)&quot;dev.scope-filter-samestep&quot; and (iii) &quot;dev.scope-filter-bootstrap&quot;</text><text x="5"
316
+ y="1463" clip-path="url(#clipPath24)" fill="black"
317
+ font-family="&apos;Arial&apos;" stroke="none"
318
+ xml:space="preserve">global workflow variables. Variables noted (i) and (ii) control respectively the removing of reactions producing a &quot;not in sink&quot; compound</text><text x="5"
319
+ y="1475" clip-path="url(#clipPath24)" fill="black"
320
+ font-family="&apos;Arial&apos;" stroke="none"
321
+ xml:space="preserve">that has been already produced at (i) a previous iteration of the metabolic graph traversal and at (ii) the same iteration than the substrate,</text><text x="5"
322
+ y="1487" clip-path="url(#clipPath24)" fill="black"
323
+ font-family="&apos;Arial&apos;" stroke="none"
324
+ xml:space="preserve">while (iii) controls the filtering of reactions that involve compounds simultaneously present in both left and right hand sides.</text><text x="5"
325
+ y="1523" clip-path="url(#clipPath24)" fill="black"
326
+ font-family="&apos;Arial&apos;" stroke="none"
327
+ xml:space="preserve">#== Change the chunk size of the source loop (outer loop)</text><text x="5"
328
+ y="1547" clip-path="url(#clipPath24)" fill="black"
329
+ font-family="&apos;Arial&apos;" stroke="none"
330
+ xml:space="preserve">By design, the source loop (outer loop) of the workflow is set so that source compounds provided by the user are treated one by one. This</text><text x="5"
331
+ y="1559" clip-path="url(#clipPath24)" fill="black"
332
+ font-family="&apos;Arial&apos;" stroke="none"
333
+ xml:space="preserve">is the recommended setting for a retrosynthetic usage as it ensures the best metabolic space exploration.</text><text x="5"
334
+ y="1583" clip-path="url(#clipPath24)" fill="black"
335
+ font-family="&apos;Arial&apos;" stroke="none"
336
+ xml:space="preserve">One can change this value using the &quot;dev.source-chunk-size&quot; global workflow variable.</text><text x="5"
337
+ y="1619" clip-path="url(#clipPath24)" fill="black"
338
+ font-family="&apos;Arial&apos;" stroke="none"
339
+ xml:space="preserve">#== Disable parsing of the left hand side of SMARTS rules (prefiltering task)</text><text x="5"
340
+ y="1643" clip-path="url(#clipPath24)" fill="black"
341
+ font-family="&apos;Arial&apos;" stroke="none"
342
+ xml:space="preserve">The workflow performs an optimization procedure before firing the rules using a prefiltering task. During this task, the workflow detects</text><text x="5"
343
+ y="1655" clip-path="url(#clipPath24)" fill="black"
344
+ font-family="&apos;Arial&apos;" stroke="none"
345
+ xml:space="preserve">and removes surrouding brakets on the left hand side of the rules.</text><text x="5"
346
+ y="1679" clip-path="url(#clipPath24)" fill="black"
347
+ font-family="&apos;Arial&apos;" stroke="none"
348
+ xml:space="preserve">One can disable this behavour using the &quot;dev.prefilter-rm-brakets&quot; global workflow variable.</text><text x="5"
349
+ y="1703" clip-path="url(#clipPath24)" fill="black"
350
+ font-family="&apos;Arial&apos;" stroke="none"
351
+ xml:space="preserve">However, we strongly recommend to not change the value unless you (really) know what you are doing.</text>
352
+ </g><g fill="rgb(238,238,236)" font-size="11" stroke-width="5"
353
+ stroke-linecap="butt" stroke="rgb(238,238,236)">
354
+ <rect x="2" y="982" clip-path="url(#clipPath23)" fill="none"
355
+ width="676" height="1240"/>
356
+ <rect x="749" y="480" clip-path="url(#clipPath25)" fill="white"
357
+ width="250" height="140" stroke="none"/>
358
+ <text x="759" y="500" clip-path="url(#clipPath26)" fill="black"
359
+ font-family="&apos;Arial&apos;" stroke="none"
360
+ xml:space="preserve">Double-click top left corner to edit.</text><rect x="754"
361
+ y="485" clip-path="url(#clipPath25)" fill="none" width="240"
362
+ height="130" stroke="rgb(255,216,0)" stroke-width="10"/>
363
+ </g>
364
+ <g stroke-width="10" font-size="11" font-family="&apos;Arial&apos;"
365
+ font-weight="bold" stroke-linecap="butt">
366
+ <text xml:space="preserve" x="765" y="53"
367
+ clip-path="url(#clipPath27)" stroke="none">Input configuration</text><image xmlns:xlink="http://www.w3.org/1999/xlink"
368
+ transform="matrix(1,0,0,1,804,63)" width="32"
369
+ xlink:show="embed" xlink:type="simple"
370
+ clip-path="url(#clipPath28)" preserveAspectRatio="none"
371
+ font-weight="normal" height="32" x="0" y="0"
372
+ xlink:href="data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAACAAAAAgCAYAAABzenr0AAAAa0lEQVR42u2XsQ2A
373
+ MAwEjcUGDBYxRKZiigxARrMwkkNFbTf30td/fle/3XMeInK5m1slR+Ye7r5H+Cm5
374
+ 0pWpcXmVmibW/ttEZfj3CwAAAAAAAAAAAAAAAAAAACvMN42VWqXxruO+hmLFPH8A
375
+ MOkNmTZYl7gAAAAASUVORK5CYII=" xlink:actuate="onLoad"/>
376
+ <image xmlns:xlink="http://www.w3.org/1999/xlink"
377
+ transform="matrix(1,0,0,1,812,71)" width="16"
378
+ xlink:show="embed" xlink:type="simple"
379
+ clip-path="url(#clipPath29)" preserveAspectRatio="none"
380
+ font-weight="normal" height="16" x="0" y="0"
381
+ xlink:href="data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAABAAAAAQCAYAAAAf8/9hAAAA3UlEQVR42mP8//8/
382
+ AyWAhRhFjCcZGfjY+RgYGRkZQBZ++vmJ4b/5f+IN4GHjYXBSdWJgY2Zj+PX3F8Oe
383
+ W3vwuwBkEzIQOS7CIMotCudz/OSAq2EipBmrKiYsYcCYDtQoCGQEQxUA2f9nQvzJ
384
+ e4GX4dGHRwysTKwMv//9ZvjB9oMBFvgIL4A0xwMxOxD/BOKFCFu+fPvCcPDeQaC5
385
+ TAz/gPDHjx8IF8NZ5UDcgeTMFqALaghHMRMDhYAF5hfGCqBjriN54QupCek91N8g
386
+ N/2D8kkxABbipAKKw2AYGAAArXBAE6T1kEAAAAAASUVORK5CYII=" xlink:actuate="onLoad"/>
387
+ <image xmlns:xlink="http://www.w3.org/1999/xlink"
388
+ transform="matrix(1,0,0,1,804,102)" width="32"
389
+ xlink:show="embed" xlink:type="simple"
390
+ clip-path="url(#clipPath30)" preserveAspectRatio="none"
391
+ font-weight="normal" height="12" x="0" y="0" font-size="3"
392
+ xlink:href="data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAACAAAAAMCAYAAAADFL+5AAABuklEQVR42sVUy07C
393
+ UBA9LdW2PigEwY2JMaCfoVv9C7/Aj/FnXLHQf2AhlLhxpUJ5WNsSKN5zpTeFVgwu
394
+ 9CSTtHceZ+7cmdGazeY1gFsh+/hbjIXcGL8nn0PHVH7FYBht0wDkvDXS5Lquw7Zt
395
+ OMV9mKaJ4WgE/91HNJkseZ4U73B08ACjHMv/qafj+e0cT6OrJTtzexu7e7siXhFR
396
+ FIl4YwRBgDiOVRJG8qVpGkolB43GqQpQrR3iI/iA2+4gFAES8uP6PfSypey2HODY
397
+ uQe6UElY4gKNs1Ps2DvK7kiI63bgeQPM5/OvSydKy7JQrzcydWKASqWiys6bp8lV
398
+ 9cQZdbQh6JMmT0AOcik/VS6RMauQh2qtikKhIN88KXseqKMNbemTB3KQK5PAf0El
399
+ wCZJ3mUVry+vmM1mstvZcN+BOtrQlj65syM4okU/LSUQhiG6XTfjwCbs9XpJAWW3
400
+ x16YseMZdck40oe+qyAHudSzpTMbDIZotVprx1B2uej27BheLI0hp6bz2M4dw3Sl
401
+ jcVGkruA8+n7vpR1INHT6PLHRcTEo/4E/b737TbkE9wsktgQmiDekvKLLahW8Sd3
402
+ I9NSe3Ml5QAAAABJRU5ErkJggg==" xlink:actuate="onLoad"/>
403
+ </g>
404
+ <g stroke-linecap="butt" font-size="11" fill="rgb(255,75,75)"
405
+ text-rendering="optimizeLegibility" font-family="&apos;Arial&apos;"
406
+ stroke="rgb(255,75,75)" stroke-width="10">
407
+ <circle r="4" clip-path="url(#clipPath31)" cx="840" cy="78"
408
+ stroke="none"/>
409
+ <image xmlns:xlink="http://www.w3.org/1999/xlink"
410
+ transform="matrix(1,0,0,1,831,69)" width="18"
411
+ xlink:show="embed" xlink:type="simple"
412
+ clip-path="url(#clipPath32)" preserveAspectRatio="none"
413
+ height="18" x="0" y="0"
414
+ xlink:href="data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAABIAAAASCAYAAABWzo5XAAABbElEQVR42mO8bWmz
415
+ iYmVheXr+w8JepcvvGIgAVw1NJbk5ONb+fvnTwYmRmYmMS4BQU8+MdFVl3QNxEgx
416
+ hEdYaCMnv4AtMwvLf+Z0YZGtzKzMduzcPFYsbKxmSTx826a/evGVGEPYuHhMf379
417
+ cvDLu/dhzNNePP+Syi+4hVjD0A359Op1GChImEGSxBqGyxCQHDNMESHD8BkCAozE
418
+ OJ2ZhZkZnyEoLsLlMiYmRmtWDo54Dh4+Y1yGYDUI2TCge52A0WvGys4h+f3jh2Of
419
+ 37wNwZXWmPBFM9BLf+AKWVh+41VLKIpBLvnz6+cbDl4+C3xJg5lQYIO88/f3r+WE
420
+ kgYzMemEmHTGTExiIyadgQ0CZlZdPlGRVUBDTPBFMbphrGysFqkCgjtA4swgQwSl
421
+ JBezcnIZ4jMEm2Fs3DyWIBrML9XU2gQ03ZgYQ7AaBgyKf3//WDHnyEj7//n16+6X
422
+ t++iSSnYYIYBDbH+++fPXwCTQTrJ2eP7AQAAAABJRU5ErkJggg==" xlink:actuate="onLoad"/>
423
+ <text x="800" y="160" clip-path="url(#clipPath33)" fill="black"
424
+ stroke="none" font-weight="bold" xml:space="preserve">Output</text><text x="781"
425
+ y="173" clip-path="url(#clipPath34)" fill="black"
426
+ stroke="none" font-weight="bold" xml:space="preserve">configuration</text><image xmlns:xlink="http://www.w3.org/1999/xlink"
427
+ stroke="black" transform="matrix(1,0,0,1,804,183)" width="32"
428
+ xlink:show="embed" xlink:type="simple" fill="black"
429
+ clip-path="url(#clipPath28)" preserveAspectRatio="none"
430
+ height="32" x="0" y="0"
431
+ xlink:href="data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAACAAAAAgCAYAAABzenr0AAAAa0lEQVR42u2XsQ2A
432
+ MAwEjcUGDBYxRKZiigxARrMwkkNFbTf30td/fle/3XMeInK5m1slR+Ye7r5H+Cm5
433
+ 0pWpcXmVmibW/ttEZfj3CwAAAAAAAAAAAAAAAAAAACvMN42VWqXxruO+hmLFPH8A
434
+ MOkNmTZYl7gAAAAASUVORK5CYII=" xlink:actuate="onLoad"/>
435
+ <image xmlns:xlink="http://www.w3.org/1999/xlink" stroke="black"
436
+ transform="matrix(1,0,0,1,812,191)" width="16"
437
+ xlink:show="embed" xlink:type="simple" fill="black"
438
+ clip-path="url(#clipPath29)" preserveAspectRatio="none"
439
+ height="16" x="0" y="0"
440
+ xlink:href="data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAABAAAAAQCAYAAAAf8/9hAAAA3UlEQVR42mP8//8/
441
+ AyWAhRhFjCcZGfjY+RgYGRkZQBZ++vmJ4b/5f+IN4GHjYXBSdWJgY2Zj+PX3F8Oe
442
+ W3vwuwBkEzIQOS7CIMotCudz/OSAq2EipBmrKiYsYcCYDtQoCGQEQxUA2f9nQvzJ
443
+ e4GX4dGHRwysTKwMv//9ZvjB9oMBFvgIL4A0xwMxOxD/BOKFCFu+fPvCcPDeQaC5
444
+ TAz/gPDHjx8IF8NZ5UDcgeTMFqALaghHMRMDhYAF5hfGCqBjriN54QupCek91N8g
445
+ N/2D8kkxABbipAKKw2AYGAAArXBAE6T1kEAAAAAASUVORK5CYII=" xlink:actuate="onLoad"/>
446
+ <image xmlns:xlink="http://www.w3.org/1999/xlink" stroke="black"
447
+ transform="matrix(1,0,0,1,804,222)" width="32"
448
+ xlink:show="embed" xlink:type="simple" fill="black"
449
+ clip-path="url(#clipPath30)" preserveAspectRatio="none"
450
+ height="12" x="0" y="0" font-size="3"
451
+ xlink:href="data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAACAAAAAMCAYAAAADFL+5AAABuklEQVR42sVUy07C
452
+ UBA9LdW2PigEwY2JMaCfoVv9C7/Aj/FnXLHQf2AhlLhxpUJ5WNsSKN5zpTeFVgwu
453
+ 9CSTtHceZ+7cmdGazeY1gFsh+/hbjIXcGL8nn0PHVH7FYBht0wDkvDXS5Lquw7Zt
454
+ OMV9mKaJ4WgE/91HNJkseZ4U73B08ACjHMv/qafj+e0cT6OrJTtzexu7e7siXhFR
455
+ FIl4YwRBgDiOVRJG8qVpGkolB43GqQpQrR3iI/iA2+4gFAES8uP6PfSypey2HODY
456
+ uQe6UElY4gKNs1Ps2DvK7kiI63bgeQPM5/OvSydKy7JQrzcydWKASqWiys6bp8lV
457
+ 9cQZdbQh6JMmT0AOcik/VS6RMauQh2qtikKhIN88KXseqKMNbemTB3KQK5PAf0El
458
+ wCZJ3mUVry+vmM1mstvZcN+BOtrQlj65syM4okU/LSUQhiG6XTfjwCbs9XpJAWW3
459
+ x16YseMZdck40oe+qyAHudSzpTMbDIZotVprx1B2uej27BheLI0hp6bz2M4dw3Sl
460
+ jcVGkruA8+n7vpR1INHT6PLHRcTEo/4E/b737TbkE9wsktgQmiDekvKLLahW8Sd3
461
+ I9NSe3Ml5QAAAABJRU5ErkJggg==" xlink:actuate="onLoad"/>
462
+ <circle r="4" clip-path="url(#clipPath35)" cx="840" cy="198"
463
+ stroke="none"/>
464
+ <text x="926" y="113" clip-path="url(#clipPath36)" fill="black"
465
+ stroke="none" font-weight="bold" xml:space="preserve">Core</text><image xmlns:xlink="http://www.w3.org/1999/xlink"
466
+ stroke="black" transform="matrix(1,0,0,1,924,123)" width="32"
467
+ xlink:show="embed" xlink:type="simple" fill="black"
468
+ clip-path="url(#clipPath28)" preserveAspectRatio="none"
469
+ height="32" x="0" y="0"
470
+ xlink:href="data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAACAAAAAgCAYAAABzenr0AAAAa0lEQVR42u2XsQ2A
471
+ MAwEjcUGDBYxRKZiigxARrMwkkNFbTf30td/fle/3XMeInK5m1slR+Ye7r5H+Cm5
472
+ 0pWpcXmVmibW/ttEZfj3CwAAAAAAAAAAAAAAAAAAACvMN42VWqXxruO+hmLFPH8A
473
+ MOkNmTZYl7gAAAAASUVORK5CYII=" xlink:actuate="onLoad"/>
474
+ <image xmlns:xlink="http://www.w3.org/1999/xlink" stroke="black"
475
+ transform="matrix(1,0,0,1,932,131)" width="16"
476
+ xlink:show="embed" xlink:type="simple" fill="black"
477
+ clip-path="url(#clipPath29)" preserveAspectRatio="none"
478
+ height="16" x="0" y="0"
479
+ xlink:href="data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAABAAAAAQCAYAAAAf8/9hAAAA3UlEQVR42mP8//8/
480
+ AyWAhRhFjCcZGfjY+RgYGRkZQBZ++vmJ4b/5f+IN4GHjYXBSdWJgY2Zj+PX3F8Oe
481
+ W3vwuwBkEzIQOS7CIMotCudz/OSAq2EipBmrKiYsYcCYDtQoCGQEQxUA2f9nQvzJ
482
+ e4GX4dGHRwysTKwMv//9ZvjB9oMBFvgIL4A0xwMxOxD/BOKFCFu+fPvCcPDeQaC5
483
+ TAz/gPDHjx8IF8NZ5UDcgeTMFqALaghHMRMDhYAF5hfGCqBjriN54QupCek91N8g
484
+ N/2D8kkxABbipAKKw2AYGAAArXBAE6T1kEAAAAAASUVORK5CYII=" xlink:actuate="onLoad"/>
485
+ <image xmlns:xlink="http://www.w3.org/1999/xlink" stroke="black"
486
+ transform="matrix(1,0,0,1,924,162)" width="32"
487
+ xlink:show="embed" xlink:type="simple" fill="black"
488
+ clip-path="url(#clipPath30)" preserveAspectRatio="none"
489
+ height="12" x="0" y="0" font-size="3"
490
+ xlink:href="data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAACAAAAAMCAYAAAADFL+5AAAB5ElEQVR42sVUPVPb
491
+ QBB9wpKsSMY28QibMTMUfPyY5A+YjoaUrjL5Ie5JTQkF6fxDwKYCD9gaW5YMsj5s
492
+ K3uCuziRREWSN7Mzd7d7897t7a7U7XZPAHTINvFvMSNrb2SSLxaQogiI478pgHF2
493
+ 5HVy9aaH6sUlSosIKnE/IcZsbw/OcQsoFMRNRZah6zqq1Uqyn04deJ6HiISvo6iq
494
+ MEoGKuUygiCA484wn8+xWq2ECJmv5PsBzPNzNCpbdFNLzgyyjw8PuDv7DvvLqSBv
495
+ NpvYrtcFUb2xg9FwiMFgIERoxSIOjg6hf9BF3C5Zv9+DbU8puS/Z3eDOytUPNMrV
496
+ VJ4UVcOWZUF6ek727OXr5BzsjPk4arXab+Qc+/sH0DRN7IUA1SMCScr8rDJdUIaP
497
+ yZqnPQvcV6DvMrfNzBiJOIqUnZSA/wUhINSN3Kp3fR9RvSEKLg/ct1wuYY2szBj2
498
+ 96wgUwKcz5/w6E5TF6LQh22aiEtGsmfVzgruT7Az5uMYj8fw5l4q7va2D58eJIpf
499
+ tP5uE1arhSivDbkgqnJW7bZtv9mGPr2yd32T2YbxWqbl14mUzIKQ2mb07StGbBBR
500
+ UEwtl1WYjMhx3cTeQhCGCCYhJhM7dxqyL2i/ivgFIo4VJbcr3nMU/wTFM9tBmpCP
501
+ WQAAAABJRU5ErkJggg==" xlink:actuate="onLoad"/>
502
+ <circle r="4" clip-path="url(#clipPath37)" cx="919" cy="128"
503
+ stroke="none"/>
504
+ <circle r="4" clip-path="url(#clipPath38)" cx="919" cy="147"
505
+ stroke="none"/>
506
+ <rect x="0" y="0" clip-path="url(#clipPath1)" fill="white"
507
+ width="661" height="941" stroke="none"/>
508
+ </g>
509
+ <g text-rendering="optimizeLegibility" stroke-width="10" font-size="11"
510
+ font-weight="bold" stroke-linecap="butt">
511
+ <text xml:space="preserve" x="0" y="11" clip-path="url(#clipPath2)"
512
+ stroke="none">RetroPath2.0</text><text x="0" y="35"
513
+ clip-path="url(#clipPath3)" font-family="&apos;Arial&apos;"
514
+ stroke="none" font-weight="normal" xml:space="preserve">The RetroPath2.0 workflow build a reaction network from a set of source compounds to a set of sink compounds.</text><text x="0"
515
+ y="59" clip-path="url(#clipPath3)"
516
+ font-family="&apos;Arial&apos;" stroke="none"
517
+ font-weight="normal" xml:space="preserve">When applied in a retrosynthetic fashion, the source is composed of the target compounds and the sink is composed of the available</text><text x="0"
518
+ y="71" clip-path="url(#clipPath3)"
519
+ font-family="&apos;Arial&apos;" stroke="none"
520
+ font-weight="normal" xml:space="preserve">reactants (for instance in the context of metabolic engineering the sink is the set of native metabolites of a chassis strain). From</text><text x="0"
521
+ y="83" clip-path="url(#clipPath3)"
522
+ font-family="&apos;Arial&apos;" stroke="none"
523
+ font-weight="normal" xml:space="preserve">amongst all the chemical reactions generated using RetroPath2.0 (in the retrosynthetic way), only a subset may effectively link a source</text><text x="0"
524
+ y="95" clip-path="url(#clipPath3)"
525
+ font-family="&apos;Arial&apos;" stroke="none"
526
+ font-weight="normal" xml:space="preserve">to a subset of sink compounds. This sub-network is considered as a scope and is output in dedicated files (see below).</text><text x="0"
527
+ y="119" clip-path="url(#clipPath3)"
528
+ font-family="&apos;Arial&apos;" stroke="none"
529
+ font-weight="normal" xml:space="preserve">The workflow handles both monomolecular (1 substrate) and bimolecular (2 substrates) reactions.</text><text xml:space="preserve"
530
+ x="0" y="156" clip-path="url(#clipPath4)" stroke="none">Getting started</text><text x="0"
531
+ y="181" clip-path="url(#clipPath5)"
532
+ font-family="&apos;Arial&apos;" stroke="none"
533
+ font-weight="normal" xml:space="preserve">1. Double click on the </text><text xml:space="preserve"
534
+ x="109" y="181" clip-path="url(#clipPath6)" stroke="none">Input configuration</text><text x="209"
535
+ y="181" clip-path="url(#clipPath7)"
536
+ font-family="&apos;Arial&apos;" stroke="none"
537
+ font-weight="normal" xml:space="preserve"> node and set appropriate values. Please refer to the embedded help panel for specification</text><text x="0"
538
+ y="193" clip-path="url(#clipPath7)"
539
+ font-family="&apos;Arial&apos;" stroke="none"
540
+ font-weight="normal" xml:space="preserve">on input files and parameters (&quot;question mark&quot; button at the bottom of the Input configuration panel).</text><text x="0"
541
+ y="218" clip-path="url(#clipPath7)"
542
+ font-family="&apos;Arial&apos;" stroke="none"
543
+ font-weight="normal" xml:space="preserve">2. Double click on the </text><text xml:space="preserve"
544
+ x="109" y="218" clip-path="url(#clipPath8)" stroke="none">Output configuration</text><text x="219"
545
+ y="218" clip-path="url(#clipPath9)"
546
+ font-family="&apos;Arial&apos;" stroke="none"
547
+ font-weight="normal" xml:space="preserve"> node and set appropriate values. Please refer to the embedded help panel for dedicated</text><text x="0"
548
+ y="230" clip-path="url(#clipPath9)"
549
+ font-family="&apos;Arial&apos;" stroke="none"
550
+ font-weight="normal" xml:space="preserve">information. (&quot;question mark&quot; button at the bottom of the Output configuration panel).</text><text x="0"
551
+ y="255" clip-path="url(#clipPath9)"
552
+ font-family="&apos;Arial&apos;" stroke="none"
553
+ font-weight="normal" xml:space="preserve">3. Right click on the </text><text xml:space="preserve"
554
+ x="100" y="255" clip-path="url(#clipPath10)" stroke="none">Core</text><text x="125"
555
+ y="255" clip-path="url(#clipPath11)"
556
+ font-family="&apos;Arial&apos;" stroke="none"
557
+ font-weight="normal" xml:space="preserve"> node and select &quot;Execute&quot;. A green dot will appear under the Core node on successful execution.</text><text x="0"
558
+ y="279" clip-path="url(#clipPath11)"
559
+ font-family="&apos;Arial&apos;" stroke="none"
560
+ font-weight="normal" xml:space="preserve">4. In order to investigate any scope found, please use the &quot;scope.html&quot; file: open it with a web browser and follow the instructions</text><text x="0"
561
+ y="291" clip-path="url(#clipPath11)"
562
+ font-family="&apos;Arial&apos;" stroke="none"
563
+ font-weight="normal" xml:space="preserve">displayed (Firefox or Google Chrome recommended).</text><text xml:space="preserve"
564
+ x="0" y="328" clip-path="url(#clipPath12)" stroke="none">Usage specifications</text><text x="0"
565
+ y="340" clip-path="url(#clipPath13)"
566
+ font-family="&apos;Arial&apos;" stroke="none"
567
+ font-weight="normal" xml:space="preserve">- RetroPath2.0 current release is compatible starting from version 3.3.6 of Knime Analytics Platform. Check older RetroPath2.0 release</text><text x="0"
568
+ y="352" clip-path="url(#clipPath13)"
569
+ font-family="&apos;Arial&apos;" stroke="none"
570
+ font-weight="normal" xml:space="preserve">for using it with older version of KNIME.</text><text xml:space="preserve"
571
+ x="0" y="389" clip-path="url(#clipPath14)" stroke="none">Limitations as of 2018/07/30</text><text x="0"
572
+ y="401" clip-path="url(#clipPath15)"
573
+ font-family="&apos;Arial&apos;" stroke="none"
574
+ font-weight="normal" xml:space="preserve">- Scope is only relevant for retrosynthetic usage (target/source to chassis/sink).</text><text xml:space="preserve"
575
+ x="0" y="438" clip-path="url(#clipPath16)" stroke="none">Release: </text><text x="48"
576
+ y="438" clip-path="url(#clipPath17)"
577
+ font-family="&apos;Arial&apos;" stroke="none"
578
+ font-weight="normal" xml:space="preserve">r20180730</text><text xml:space="preserve"
579
+ x="0" y="463" clip-path="url(#clipPath18)" stroke="none">How to cite</text><text x="0"
580
+ y="475" clip-path="url(#clipPath19)"
581
+ font-family="&apos;Arial&apos;" stroke="none"
582
+ font-weight="normal" xml:space="preserve">Delépine B, Duigou T, Carbonell P, Faulon JL. RetroPath2.0: A retrosynthesis workflow for metabolic engineers. Metabolic Engineering</text><text x="0"
583
+ y="487" clip-path="url(#clipPath19)"
584
+ font-family="&apos;Arial&apos;" stroke="none"
585
+ font-weight="normal" xml:space="preserve">(2017). DOI: https://doi.org/10.1016/j.ymben.2017.12.002</text><text x="0"
586
+ y="511" clip-path="url(#clipPath19)"
587
+ font-family="&apos;Arial&apos;" stroke="none"
588
+ font-weight="normal" xml:space="preserve">Please report bugs to thomas.duigou@inra.fr</text><text x="0"
589
+ y="535" clip-path="url(#clipPath20)"
590
+ font-family="&apos;Arial&apos;" stroke="none"
591
+ xml:space="preserve">Worfklow Licence: CC BY-NC-SA</text><text x="0"
592
+ y="548" clip-path="url(#clipPath21)" stroke="none"
593
+ font-weight="normal" xml:space="preserve">T Duigou, B Delépine, JL Faulon, 2017-2018.</text><text x="0"
594
+ y="561" clip-path="url(#clipPath22)" stroke="none"
595
+ font-weight="normal" xml:space="preserve">This work is licensed under the Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License. To view</text><text x="0"
596
+ y="574" clip-path="url(#clipPath22)" stroke="none"
597
+ font-weight="normal" xml:space="preserve">a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/4.0/.</text><rect x="0"
598
+ y="980" clip-path="url(#clipPath23)" fill="white" width="681"
599
+ height="1245" stroke="none"/>
600
+ <text x="5" y="995" clip-path="url(#clipPath24)"
601
+ font-family="&apos;Arial&apos;" stroke="none"
602
+ font-weight="normal" xml:space="preserve">Dev/Advanced user features:</text><text x="5"
603
+ y="1019" clip-path="url(#clipPath24)"
604
+ font-family="&apos;Arial&apos;" stroke="none"
605
+ font-weight="normal" xml:space="preserve">The features below are activable through the global workflow variables pane.</text><text x="5"
606
+ y="1043" clip-path="url(#clipPath24)"
607
+ font-family="&apos;Arial&apos;" stroke="none"
608
+ font-weight="normal" xml:space="preserve">#== Use the &quot;Fire&quot; Python Snippet for firing rules</text><text x="5"
609
+ y="1067" clip-path="url(#clipPath24)"
610
+ font-family="&apos;Arial&apos;" stroke="none"
611
+ font-weight="normal" xml:space="preserve">A python snippet is embedded into the workflow allowing an enhanced way of firing rules. The &quot;Fire&quot; python snippet allows one to</text><text x="5"
612
+ y="1079" clip-path="url(#clipPath24)"
613
+ font-family="&apos;Arial&apos;" stroke="none"
614
+ font-weight="normal" xml:space="preserve">compute bigger metabolic maps thanks to a drastically improved memory management. This feature can be enabled at the cost of some</text><text x="5"
615
+ y="1091" clip-path="url(#clipPath24)"
616
+ font-family="&apos;Arial&apos;" stroke="none"
617
+ font-weight="normal" xml:space="preserve">python dependancies (see below) and is available for Linux systems.</text><text x="5"
618
+ y="1115" clip-path="url(#clipPath24)"
619
+ font-family="&apos;Arial&apos;" stroke="none"
620
+ font-weight="normal" xml:space="preserve">Set the &quot;dev.use-py-fire&quot; global workflow variable to 1 in order to enable the feature. Timeout and multihreading settings are adjustable</text><text x="5"
621
+ y="1127" clip-path="url(#clipPath24)"
622
+ font-family="&apos;Arial&apos;" stroke="none"
623
+ font-weight="normal" xml:space="preserve">using the &quot;dev.py-fire-timeout&quot; and &quot;dev.py-fire-procs&quot;, respectively.</text><text x="5"
624
+ y="1151" clip-path="url(#clipPath24)"
625
+ font-family="&apos;Arial&apos;" stroke="none"
626
+ font-weight="normal" xml:space="preserve">Setting up the python environment assuming you are using conda for managing python environments (https://www.continuum.io):</text><text x="5"
627
+ y="1175" clip-path="url(#clipPath24)"
628
+ font-family="&apos;Arial&apos;" stroke="none"
629
+ font-weight="normal" xml:space="preserve">1) Create the environment and install packages:</text><text x="5"
630
+ y="1199" clip-path="url(#clipPath24)"
631
+ font-family="&apos;Arial&apos;" stroke="none"
632
+ font-weight="normal" xml:space="preserve">conda create --name pyknime python=2.7</text><text x="5"
633
+ y="1211" clip-path="url(#clipPath24)"
634
+ font-family="&apos;Arial&apos;" stroke="none"
635
+ font-weight="normal" xml:space="preserve">source activate pyknime</text><text x="5"
636
+ y="1223" clip-path="url(#clipPath24)"
637
+ font-family="&apos;Arial&apos;" stroke="none"
638
+ font-weight="normal" xml:space="preserve">conda install --channel rdkit rdkit # Please use rdkit release 2016.03.1 or later</text><text x="5"
639
+ y="1235" clip-path="url(#clipPath24)"
640
+ font-family="&apos;Arial&apos;" stroke="none"
641
+ font-weight="normal" xml:space="preserve">conda install pandas protobuf psutil</text><text x="5"
642
+ y="1259" clip-path="url(#clipPath24)"
643
+ font-family="&apos;Arial&apos;" stroke="none"
644
+ font-weight="normal" xml:space="preserve">2) Get the python path</text><text x="5"
645
+ y="1283" clip-path="url(#clipPath24)"
646
+ font-family="&apos;Arial&apos;" stroke="none"
647
+ font-weight="normal" xml:space="preserve">source activate test</text><text x="5"
648
+ y="1295" clip-path="url(#clipPath24)"
649
+ font-family="&apos;Arial&apos;" stroke="none"
650
+ font-weight="normal" xml:space="preserve">which python</text><text x="5"
651
+ y="1319" clip-path="url(#clipPath24)"
652
+ font-family="&apos;Arial&apos;" stroke="none"
653
+ font-weight="normal" xml:space="preserve">3) Set this python path into Knime settings</text><text x="5"
654
+ y="1331" clip-path="url(#clipPath24)"
655
+ font-family="&apos;Arial&apos;" stroke="none"
656
+ font-weight="normal" xml:space="preserve">For more details: https://www.knime.org/blog/how-to-setup-the-python-extension</text><text x="5"
657
+ y="1355" clip-path="url(#clipPath24)"
658
+ font-family="&apos;Arial&apos;" stroke="none"
659
+ font-weight="normal" xml:space="preserve">4) Restart Knime</text><text x="5"
660
+ y="1391" clip-path="url(#clipPath24)"
661
+ font-family="&apos;Arial&apos;" stroke="none"
662
+ font-weight="normal" xml:space="preserve">#== Disable Scope filters</text><text x="5"
663
+ y="1415" clip-path="url(#clipPath24)"
664
+ font-family="&apos;Arial&apos;" stroke="none"
665
+ font-weight="normal" xml:space="preserve">The scope computation involves several heuristic filters in order to remove undesirable reactions. Such highly undesirable reactions are</text><text x="5"
666
+ y="1427" clip-path="url(#clipPath24)"
667
+ font-family="&apos;Arial&apos;" stroke="none"
668
+ font-weight="normal" xml:space="preserve">those promoting metabolic loops increasing the connectivity of metabolic graphs.</text><text x="5"
669
+ y="1451" clip-path="url(#clipPath24)"
670
+ font-family="&apos;Arial&apos;" stroke="none"
671
+ font-weight="normal" xml:space="preserve">One can disable these filters using the (i) &quot;dev.scope-filter-stepback&quot;, (ii)&quot;dev.scope-filter-samestep&quot; and (iii) &quot;dev.scope-filter-bootstrap&quot;</text><text x="5"
672
+ y="1463" clip-path="url(#clipPath24)"
673
+ font-family="&apos;Arial&apos;" stroke="none"
674
+ font-weight="normal" xml:space="preserve">global workflow variables. Variables noted (i) and (ii) control respectively the removing of reactions producing a &quot;not in sink&quot; compound</text><text x="5"
675
+ y="1475" clip-path="url(#clipPath24)"
676
+ font-family="&apos;Arial&apos;" stroke="none"
677
+ font-weight="normal" xml:space="preserve">that has been already produced at (i) a previous iteration of the metabolic graph traversal and at (ii) the same iteration than the substrate,</text><text x="5"
678
+ y="1487" clip-path="url(#clipPath24)"
679
+ font-family="&apos;Arial&apos;" stroke="none"
680
+ font-weight="normal" xml:space="preserve">while (iii) controls the filtering of reactions that involve compounds simultaneously present in both left and right hand sides.</text><text x="5"
681
+ y="1523" clip-path="url(#clipPath24)"
682
+ font-family="&apos;Arial&apos;" stroke="none"
683
+ font-weight="normal" xml:space="preserve">#== Change the chunk size of the source loop (outer loop)</text><text x="5"
684
+ y="1547" clip-path="url(#clipPath24)"
685
+ font-family="&apos;Arial&apos;" stroke="none"
686
+ font-weight="normal" xml:space="preserve">By design, the source loop (outer loop) of the workflow is set so that source compounds provided by the user are treated one by one. This</text><text x="5"
687
+ y="1559" clip-path="url(#clipPath24)"
688
+ font-family="&apos;Arial&apos;" stroke="none"
689
+ font-weight="normal" xml:space="preserve">is the recommended setting for a retrosynthetic usage as it ensures the best metabolic space exploration.</text><text x="5"
690
+ y="1583" clip-path="url(#clipPath24)"
691
+ font-family="&apos;Arial&apos;" stroke="none"
692
+ font-weight="normal" xml:space="preserve">One can change this value using the &quot;dev.source-chunk-size&quot; global workflow variable.</text><text x="5"
693
+ y="1619" clip-path="url(#clipPath24)"
694
+ font-family="&apos;Arial&apos;" stroke="none"
695
+ font-weight="normal" xml:space="preserve">#== Disable parsing of the left hand side of SMARTS rules (prefiltering task)</text><text x="5"
696
+ y="1643" clip-path="url(#clipPath24)"
697
+ font-family="&apos;Arial&apos;" stroke="none"
698
+ font-weight="normal" xml:space="preserve">The workflow performs an optimization procedure before firing the rules using a prefiltering task. During this task, the workflow detects</text><text x="5"
699
+ y="1655" clip-path="url(#clipPath24)"
700
+ font-family="&apos;Arial&apos;" stroke="none"
701
+ font-weight="normal" xml:space="preserve">and removes surrouding brakets on the left hand side of the rules.</text><text x="5"
702
+ y="1679" clip-path="url(#clipPath24)"
703
+ font-family="&apos;Arial&apos;" stroke="none"
704
+ font-weight="normal" xml:space="preserve">One can disable this behavour using the &quot;dev.prefilter-rm-brakets&quot; global workflow variable.</text><text x="5"
705
+ y="1703" clip-path="url(#clipPath24)"
706
+ font-family="&apos;Arial&apos;" stroke="none"
707
+ font-weight="normal" xml:space="preserve">However, we strongly recommend to not change the value unless you (really) know what you are doing.</text>
708
+ </g><g stroke-linecap="butt" font-size="11" fill="rgb(238,238,236)"
709
+ text-rendering="optimizeLegibility" stroke="rgb(238,238,236)"
710
+ stroke-width="5">
711
+ <rect x="2" y="982" clip-path="url(#clipPath23)" fill="none"
712
+ width="676" height="1240"/>
713
+ <rect x="749" y="480" clip-path="url(#clipPath25)" fill="white"
714
+ width="250" height="140" stroke="none"/>
715
+ <text x="759" y="500" clip-path="url(#clipPath26)" fill="black"
716
+ font-family="&apos;Arial&apos;" stroke="none"
717
+ xml:space="preserve">Double-click top left corner to edit.</text><rect x="754"
718
+ y="485" clip-path="url(#clipPath25)" fill="none" width="240"
719
+ height="130" stroke="rgb(255,216,0)" stroke-width="10"/>
720
+ </g>
721
+ <g stroke-linecap="butt" font-size="11"
722
+ text-rendering="optimizeLegibility" font-family="&apos;Arial&apos;"
723
+ font-weight="bold" stroke-width="10">
724
+ <text xml:space="preserve" x="765" y="53"
725
+ clip-path="url(#clipPath27)" stroke="none">Input configuration</text><image xmlns:xlink="http://www.w3.org/1999/xlink"
726
+ transform="matrix(1,0,0,1,804,63)" width="32"
727
+ xlink:show="embed" xlink:type="simple"
728
+ clip-path="url(#clipPath28)" preserveAspectRatio="none"
729
+ font-weight="normal" height="32" x="0" y="0"
730
+ xlink:href="data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAACAAAAAgCAYAAABzenr0AAAAa0lEQVR42u2XsQ2A
731
+ MAwEjcUGDBYxRKZiigxARrMwkkNFbTf30td/fle/3XMeInK5m1slR+Ye7r5H+Cm5
732
+ 0pWpcXmVmibW/ttEZfj3CwAAAAAAAAAAAAAAAAAAACvMN42VWqXxruO+hmLFPH8A
733
+ MOkNmTZYl7gAAAAASUVORK5CYII=" xlink:actuate="onLoad"/>
734
+ <image xmlns:xlink="http://www.w3.org/1999/xlink"
735
+ transform="matrix(1,0,0,1,812,71)" width="16"
736
+ xlink:show="embed" xlink:type="simple"
737
+ clip-path="url(#clipPath29)" preserveAspectRatio="none"
738
+ font-weight="normal" height="16" x="0" y="0"
739
+ xlink:href="data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAABAAAAAQCAYAAAAf8/9hAAAA3UlEQVR42mP8//8/
740
+ AyWAhRhFjCcZGfjY+RgYGRkZQBZ++vmJ4b/5f+IN4GHjYXBSdWJgY2Zj+PX3F8Oe
741
+ W3vwuwBkEzIQOS7CIMotCudz/OSAq2EipBmrKiYsYcCYDtQoCGQEQxUA2f9nQvzJ
742
+ e4GX4dGHRwysTKwMv//9ZvjB9oMBFvgIL4A0xwMxOxD/BOKFCFu+fPvCcPDeQaC5
743
+ TAz/gPDHjx8IF8NZ5UDcgeTMFqALaghHMRMDhYAF5hfGCqBjriN54QupCek91N8g
744
+ N/2D8kkxABbipAKKw2AYGAAArXBAE6T1kEAAAAAASUVORK5CYII=" xlink:actuate="onLoad"/>
745
+ <image xmlns:xlink="http://www.w3.org/1999/xlink"
746
+ transform="matrix(1,0,0,1,804,102)" width="32"
747
+ xlink:show="embed" xlink:type="simple"
748
+ clip-path="url(#clipPath30)" preserveAspectRatio="none"
749
+ font-weight="normal" height="12" x="0" y="0" font-size="3"
750
+ xlink:href="data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAACAAAAAMCAYAAAADFL+5AAABuklEQVR42sVUy07C
751
+ UBA9LdW2PigEwY2JMaCfoVv9C7/Aj/FnXLHQf2AhlLhxpUJ5WNsSKN5zpTeFVgwu
752
+ 9CSTtHceZ+7cmdGazeY1gFsh+/hbjIXcGL8nn0PHVH7FYBht0wDkvDXS5Lquw7Zt
753
+ OMV9mKaJ4WgE/91HNJkseZ4U73B08ACjHMv/qafj+e0cT6OrJTtzexu7e7siXhFR
754
+ FIl4YwRBgDiOVRJG8qVpGkolB43GqQpQrR3iI/iA2+4gFAES8uP6PfSypey2HODY
755
+ uQe6UElY4gKNs1Ps2DvK7kiI63bgeQPM5/OvSydKy7JQrzcydWKASqWiys6bp8lV
756
+ 9cQZdbQh6JMmT0AOcik/VS6RMauQh2qtikKhIN88KXseqKMNbemTB3KQK5PAf0El
757
+ wCZJ3mUVry+vmM1mstvZcN+BOtrQlj65syM4okU/LSUQhiG6XTfjwCbs9XpJAWW3
758
+ x16YseMZdck40oe+qyAHudSzpTMbDIZotVprx1B2uej27BheLI0hp6bz2M4dw3Sl
759
+ jcVGkruA8+n7vpR1INHT6PLHRcTEo/4E/b737TbkE9wsktgQmiDekvKLLahW8Sd3
760
+ I9NSe3Ml5QAAAABJRU5ErkJggg==" xlink:actuate="onLoad"/>
761
+ <circle clip-path="url(#clipPath31)" fill="rgb(255,75,75)" r="4"
762
+ cx="840" cy="78" stroke="none"/>
763
+ <image xmlns:xlink="http://www.w3.org/1999/xlink"
764
+ stroke="rgb(255,75,75)" transform="matrix(1,0,0,1,831,69)"
765
+ width="18" xlink:show="embed" xlink:type="simple"
766
+ fill="rgb(255,75,75)" clip-path="url(#clipPath32)"
767
+ preserveAspectRatio="none" font-weight="normal" height="18"
768
+ x="0" y="0"
769
+ xlink:href="data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAABIAAAASCAYAAABWzo5XAAABbElEQVR42mO8bWmz
770
+ iYmVheXr+w8JepcvvGIgAVw1NJbk5ONb+fvnTwYmRmYmMS4BQU8+MdFVl3QNxEgx
771
+ hEdYaCMnv4AtMwvLf+Z0YZGtzKzMduzcPFYsbKxmSTx826a/evGVGEPYuHhMf379
772
+ cvDLu/dhzNNePP+Syi+4hVjD0A359Op1GChImEGSxBqGyxCQHDNMESHD8BkCAozE
773
+ OJ2ZhZkZnyEoLsLlMiYmRmtWDo54Dh4+Y1yGYDUI2TCge52A0WvGys4h+f3jh2Of
774
+ 37wNwZXWmPBFM9BLf+AKWVh+41VLKIpBLvnz6+cbDl4+C3xJg5lQYIO88/f3r+WE
775
+ kgYzMemEmHTGTExiIyadgQ0CZlZdPlGRVUBDTPBFMbphrGysFqkCgjtA4swgQwSl
776
+ JBezcnIZ4jMEm2Fs3DyWIBrML9XU2gQ03ZgYQ7AaBgyKf3//WDHnyEj7//n16+6X
777
+ t++iSSnYYIYBDbH+++fPXwCTQTrJ2eP7AQAAAABJRU5ErkJggg==" xlink:actuate="onLoad"/>
778
+ <text xml:space="preserve" x="800" y="160"
779
+ clip-path="url(#clipPath33)" stroke="none">Output</text><text xml:space="preserve"
780
+ x="781" y="173" clip-path="url(#clipPath34)" stroke="none">configuration</text><image xmlns:xlink="http://www.w3.org/1999/xlink"
781
+ transform="matrix(1,0,0,1,804,183)" width="32"
782
+ xlink:show="embed" xlink:type="simple"
783
+ clip-path="url(#clipPath28)" preserveAspectRatio="none"
784
+ font-weight="normal" height="32" x="0" y="0"
785
+ xlink:href="data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAACAAAAAgCAYAAABzenr0AAAAa0lEQVR42u2XsQ2A
786
+ MAwEjcUGDBYxRKZiigxARrMwkkNFbTf30td/fle/3XMeInK5m1slR+Ye7r5H+Cm5
787
+ 0pWpcXmVmibW/ttEZfj3CwAAAAAAAAAAAAAAAAAAACvMN42VWqXxruO+hmLFPH8A
788
+ MOkNmTZYl7gAAAAASUVORK5CYII=" xlink:actuate="onLoad"/>
789
+ <image xmlns:xlink="http://www.w3.org/1999/xlink"
790
+ transform="matrix(1,0,0,1,812,191)" width="16"
791
+ xlink:show="embed" xlink:type="simple"
792
+ clip-path="url(#clipPath29)" preserveAspectRatio="none"
793
+ font-weight="normal" height="16" x="0" y="0"
794
+ xlink:href="data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAABAAAAAQCAYAAAAf8/9hAAAA3UlEQVR42mP8//8/
795
+ AyWAhRhFjCcZGfjY+RgYGRkZQBZ++vmJ4b/5f+IN4GHjYXBSdWJgY2Zj+PX3F8Oe
796
+ W3vwuwBkEzIQOS7CIMotCudz/OSAq2EipBmrKiYsYcCYDtQoCGQEQxUA2f9nQvzJ
797
+ e4GX4dGHRwysTKwMv//9ZvjB9oMBFvgIL4A0xwMxOxD/BOKFCFu+fPvCcPDeQaC5
798
+ TAz/gPDHjx8IF8NZ5UDcgeTMFqALaghHMRMDhYAF5hfGCqBjriN54QupCek91N8g
799
+ N/2D8kkxABbipAKKw2AYGAAArXBAE6T1kEAAAAAASUVORK5CYII=" xlink:actuate="onLoad"/>
800
+ <image xmlns:xlink="http://www.w3.org/1999/xlink"
801
+ transform="matrix(1,0,0,1,804,222)" width="32"
802
+ xlink:show="embed" xlink:type="simple"
803
+ clip-path="url(#clipPath30)" preserveAspectRatio="none"
804
+ font-weight="normal" height="12" x="0" y="0" font-size="3"
805
+ xlink:href="data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAACAAAAAMCAYAAAADFL+5AAABuklEQVR42sVUy07C
806
+ UBA9LdW2PigEwY2JMaCfoVv9C7/Aj/FnXLHQf2AhlLhxpUJ5WNsSKN5zpTeFVgwu
807
+ 9CSTtHceZ+7cmdGazeY1gFsh+/hbjIXcGL8nn0PHVH7FYBht0wDkvDXS5Lquw7Zt
808
+ OMV9mKaJ4WgE/91HNJkseZ4U73B08ACjHMv/qafj+e0cT6OrJTtzexu7e7siXhFR
809
+ FIl4YwRBgDiOVRJG8qVpGkolB43GqQpQrR3iI/iA2+4gFAES8uP6PfSypey2HODY
810
+ uQe6UElY4gKNs1Ps2DvK7kiI63bgeQPM5/OvSydKy7JQrzcydWKASqWiys6bp8lV
811
+ 9cQZdbQh6JMmT0AOcik/VS6RMauQh2qtikKhIN88KXseqKMNbemTB3KQK5PAf0El
812
+ wCZJ3mUVry+vmM1mstvZcN+BOtrQlj65syM4okU/LSUQhiG6XTfjwCbs9XpJAWW3
813
+ x16YseMZdck40oe+qyAHudSzpTMbDIZotVprx1B2uej27BheLI0hp6bz2M4dw3Sl
814
+ jcVGkruA8+n7vpR1INHT6PLHRcTEo/4E/b737TbkE9wsktgQmiDekvKLLahW8Sd3
815
+ I9NSe3Ml5QAAAABJRU5ErkJggg==" xlink:actuate="onLoad"/>
816
+ <circle clip-path="url(#clipPath35)" fill="rgb(255,75,75)" r="4"
817
+ cx="840" cy="198" stroke="none"/>
818
+ <text xml:space="preserve" x="926" y="113"
819
+ clip-path="url(#clipPath36)" stroke="none">Core</text><image xmlns:xlink="http://www.w3.org/1999/xlink"
820
+ transform="matrix(1,0,0,1,924,123)" width="32"
821
+ xlink:show="embed" xlink:type="simple"
822
+ clip-path="url(#clipPath28)" preserveAspectRatio="none"
823
+ font-weight="normal" height="32" x="0" y="0"
824
+ xlink:href="data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAACAAAAAgCAYAAABzenr0AAAAa0lEQVR42u2XsQ2A
825
+ MAwEjcUGDBYxRKZiigxARrMwkkNFbTf30td/fle/3XMeInK5m1slR+Ye7r5H+Cm5
826
+ 0pWpcXmVmibW/ttEZfj3CwAAAAAAAAAAAAAAAAAAACvMN42VWqXxruO+hmLFPH8A
827
+ MOkNmTZYl7gAAAAASUVORK5CYII=" xlink:actuate="onLoad"/>
828
+ <image xmlns:xlink="http://www.w3.org/1999/xlink"
829
+ transform="matrix(1,0,0,1,932,131)" width="16"
830
+ xlink:show="embed" xlink:type="simple"
831
+ clip-path="url(#clipPath29)" preserveAspectRatio="none"
832
+ font-weight="normal" height="16" x="0" y="0"
833
+ xlink:href="data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAABAAAAAQCAYAAAAf8/9hAAAA3UlEQVR42mP8//8/
834
+ AyWAhRhFjCcZGfjY+RgYGRkZQBZ++vmJ4b/5f+IN4GHjYXBSdWJgY2Zj+PX3F8Oe
835
+ W3vwuwBkEzIQOS7CIMotCudz/OSAq2EipBmrKiYsYcCYDtQoCGQEQxUA2f9nQvzJ
836
+ e4GX4dGHRwysTKwMv//9ZvjB9oMBFvgIL4A0xwMxOxD/BOKFCFu+fPvCcPDeQaC5
837
+ TAz/gPDHjx8IF8NZ5UDcgeTMFqALaghHMRMDhYAF5hfGCqBjriN54QupCek91N8g
838
+ N/2D8kkxABbipAKKw2AYGAAArXBAE6T1kEAAAAAASUVORK5CYII=" xlink:actuate="onLoad"/>
839
+ <image xmlns:xlink="http://www.w3.org/1999/xlink"
840
+ transform="matrix(1,0,0,1,924,162)" width="32"
841
+ xlink:show="embed" xlink:type="simple"
842
+ clip-path="url(#clipPath30)" preserveAspectRatio="none"
843
+ font-weight="normal" height="12" x="0" y="0" font-size="3"
844
+ xlink:href="data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAACAAAAAMCAYAAAADFL+5AAAB5ElEQVR42sVUPVPb
845
+ QBB9wpKsSMY28QibMTMUfPyY5A+YjoaUrjL5Ie5JTQkF6fxDwKYCD9gaW5YMsj5s
846
+ K3uCuziRREWSN7Mzd7d7897t7a7U7XZPAHTINvFvMSNrb2SSLxaQogiI478pgHF2
847
+ 5HVy9aaH6sUlSosIKnE/IcZsbw/OcQsoFMRNRZah6zqq1Uqyn04deJ6HiISvo6iq
848
+ MEoGKuUygiCA484wn8+xWq2ECJmv5PsBzPNzNCpbdFNLzgyyjw8PuDv7DvvLqSBv
849
+ NpvYrtcFUb2xg9FwiMFgIERoxSIOjg6hf9BF3C5Zv9+DbU8puS/Z3eDOytUPNMrV
850
+ VJ4UVcOWZUF6ek727OXr5BzsjPk4arXab+Qc+/sH0DRN7IUA1SMCScr8rDJdUIaP
851
+ yZqnPQvcV6DvMrfNzBiJOIqUnZSA/wUhINSN3Kp3fR9RvSEKLg/ct1wuYY2szBj2
852
+ 96wgUwKcz5/w6E5TF6LQh22aiEtGsmfVzgruT7Az5uMYj8fw5l4q7va2D58eJIpf
853
+ tP5uE1arhSivDbkgqnJW7bZtv9mGPr2yd32T2YbxWqbl14mUzIKQ2mb07StGbBBR
854
+ UEwtl1WYjMhx3cTeQhCGCCYhJhM7dxqyL2i/ivgFIo4VJbcr3nMU/wTFM9tBmpCP
855
+ WQAAAABJRU5ErkJggg==" xlink:actuate="onLoad"/>
856
+ <circle clip-path="url(#clipPath37)" fill="rgb(255,75,75)" r="4"
857
+ cx="919" cy="128" stroke="none"/>
858
+ <circle clip-path="url(#clipPath38)" fill="rgb(255,75,75)" r="4"
859
+ cx="919" cy="147" stroke="none"/>
860
+ </g>
861
+ <g fill="rgb(255,75,75)" text-rendering="optimizeLegibility"
862
+ font-size="11" stroke-linecap="butt" stroke="rgb(255,75,75)">
863
+ <line clip-path="url(#clipPath39)" fill="none" x1="845" x2="853"
864
+ y1="78" y2="78"/>
865
+ <line clip-path="url(#clipPath39)" fill="none" x1="853" x2="906"
866
+ y1="78" y2="128"/>
867
+ <line clip-path="url(#clipPath39)" fill="none" x1="906" x2="914"
868
+ y1="128" y2="128"/>
869
+ <line clip-path="url(#clipPath39)" fill="none" x1="845" x2="853"
870
+ y1="198" y2="198"/>
871
+ <line clip-path="url(#clipPath39)" fill="none" x1="853" x2="906"
872
+ y1="198" y2="147"/>
873
+ <line clip-path="url(#clipPath39)" fill="none" x1="906" x2="914"
874
+ y1="147" y2="147"/>
875
+ </g>
876
+ </g>
877
+ </svg>