rb-gsl 1.16.0.4 → 1.16.0.5

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Files changed (307) hide show
  1. checksums.yaml +4 -4
  2. data/.gitignore +12 -0
  3. data/.travis.yml +24 -0
  4. data/AUTHORS +6 -0
  5. data/COPYING +341 -339
  6. data/ChangeLog +608 -587
  7. data/Gemfile +4 -0
  8. data/README.md +77 -0
  9. data/Rakefile +14 -33
  10. data/THANKS +1 -1
  11. data/examples/blas/blas.rb +1 -1
  12. data/examples/bspline.rb +3 -3
  13. data/examples/complex/functions.rb +4 -4
  14. data/examples/complex/mul.rb +1 -1
  15. data/examples/const/physconst.rb +4 -4
  16. data/examples/const/travel.rb +4 -4
  17. data/examples/eigen/nonsymmv.rb +1 -1
  18. data/examples/eigen/qhoscillator.rb +3 -3
  19. data/examples/fft/radix2.rb +1 -1
  20. data/examples/fft/real-halfcomplex.rb +3 -3
  21. data/examples/fft/real-halfcomplex2.rb +3 -3
  22. data/examples/fit/expfit.rb +1 -1
  23. data/examples/fit/multifit.rb +1 -1
  24. data/examples/fit/ndlinear.rb +44 -44
  25. data/examples/fit/nonlinearfit.rb +1 -1
  26. data/examples/fit/wlinear.rb +3 -3
  27. data/examples/function/function.rb +1 -1
  28. data/examples/function/min.rb +1 -1
  29. data/examples/function/synchrotron.rb +2 -2
  30. data/examples/gallery/koch.rb +1 -1
  31. data/examples/histogram/cauchy.rb +2 -2
  32. data/examples/histogram/exponential.rb +1 -1
  33. data/examples/histogram/histo3d.rb +1 -1
  34. data/examples/histogram/histogram-pdf.rb +2 -2
  35. data/examples/histogram/xexp.rb +1 -1
  36. data/examples/integration/ahmed.rb +2 -2
  37. data/examples/integration/cosmology.rb +7 -7
  38. data/examples/integration/friedmann.rb +4 -4
  39. data/examples/integration/qng.rb +1 -1
  40. data/examples/interp/demo.rb +2 -2
  41. data/examples/linalg/LQ_solve.rb +1 -1
  42. data/examples/linalg/LU.rb +1 -1
  43. data/examples/linalg/LU2.rb +1 -1
  44. data/examples/linalg/LU_narray.rb +1 -1
  45. data/examples/linalg/PTLQ.rb +1 -1
  46. data/examples/linalg/QRPT.rb +1 -1
  47. data/examples/linalg/chol.rb +1 -1
  48. data/examples/linalg/chol_narray.rb +1 -1
  49. data/examples/linalg/complex.rb +1 -1
  50. data/examples/math/elementary.rb +1 -1
  51. data/examples/math/functions.rb +1 -1
  52. data/examples/math/inf_nan.rb +1 -1
  53. data/examples/math/minmax.rb +1 -1
  54. data/examples/math/power.rb +1 -1
  55. data/examples/math/test.rb +1 -1
  56. data/examples/min.rb +1 -1
  57. data/examples/multimin/bundle.rb +1 -1
  58. data/examples/multimin/cqp.rb +17 -17
  59. data/examples/multiroot/fsolver3.rb +1 -1
  60. data/examples/odeiv/binarysystem.rb +12 -12
  61. data/examples/odeiv/demo.rb +3 -3
  62. data/examples/odeiv/frei1.rb +7 -7
  63. data/examples/odeiv/frei2.rb +4 -4
  64. data/examples/odeiv/oscillator.rb +1 -1
  65. data/examples/odeiv/sedov.rb +3 -3
  66. data/examples/odeiv/whitedwarf.rb +11 -11
  67. data/examples/permutation/ex1.rb +2 -2
  68. data/examples/permutation/permutation.rb +1 -1
  69. data/examples/poly/demo.rb +1 -1
  70. data/examples/random/diffusion.rb +1 -1
  71. data/examples/random/generator.rb +2 -2
  72. data/examples/random/randomwalk.rb +3 -3
  73. data/examples/random/rng.rb +1 -1
  74. data/examples/roots/bisection.rb +1 -1
  75. data/examples/roots/brent.rb +1 -1
  76. data/examples/roots/demo.rb +1 -1
  77. data/examples/roots/newton.rb +2 -2
  78. data/examples/roots/recombination.gp +0 -1
  79. data/examples/sf/hyperg.rb +1 -1
  80. data/examples/sf/sphbessel.rb +1 -1
  81. data/examples/sort/sort.rb +1 -1
  82. data/examples/tamu_anova.rb +4 -4
  83. data/examples/vector/add.rb +1 -1
  84. data/examples/vector/decimate.rb +1 -1
  85. data/examples/vector/gnuplot.rb +8 -8
  86. data/examples/vector/vector.rb +2 -2
  87. data/examples/wavelet/wavelet1.rb +1 -1
  88. data/ext/{gsl → gsl_native}/alf.c +9 -9
  89. data/ext/{gsl → gsl_native}/array.c +64 -151
  90. data/ext/{gsl → gsl_native}/array_complex.c +61 -63
  91. data/ext/{gsl → gsl_native}/blas.c +0 -0
  92. data/ext/{gsl → gsl_native}/blas1.c +32 -32
  93. data/ext/{gsl → gsl_native}/blas2.c +54 -58
  94. data/ext/{gsl → gsl_native}/blas3.c +54 -54
  95. data/ext/{gsl → gsl_native}/block.c +3 -6
  96. data/ext/{gsl/block_source.c → gsl_native/block_source.h} +109 -111
  97. data/ext/gsl_native/bspline.c +122 -0
  98. data/ext/{gsl → gsl_native}/bundle.c +0 -0
  99. data/ext/{gsl → gsl_native}/cdf.c +76 -88
  100. data/ext/{gsl → gsl_native}/cheb.c +74 -85
  101. data/ext/{gsl → gsl_native}/combination.c +9 -16
  102. data/ext/{gsl → gsl_native}/common.c +7 -37
  103. data/ext/{gsl → gsl_native}/complex.c +113 -115
  104. data/ext/gsl_native/const.c +331 -0
  105. data/ext/{gsl → gsl_native}/const_additional.c +12 -33
  106. data/ext/gsl_native/cqp.c +283 -0
  107. data/ext/{gsl → gsl_native}/deriv.c +22 -30
  108. data/ext/{gsl → gsl_native}/dht.c +20 -28
  109. data/ext/{gsl → gsl_native}/diff.c +23 -25
  110. data/ext/{gsl → gsl_native}/dirac.c +44 -45
  111. data/ext/{gsl → gsl_native}/eigen.c +1031 -1082
  112. data/ext/{gsl → gsl_native}/error.c +13 -13
  113. data/ext/{gsl → gsl_native}/extconf.rb +5 -13
  114. data/ext/{gsl → gsl_native}/fft.c +192 -198
  115. data/ext/{gsl → gsl_native}/fit.c +16 -16
  116. data/ext/gsl_native/fresnel.c +312 -0
  117. data/ext/{gsl → gsl_native}/function.c +29 -35
  118. data/ext/{gsl → gsl_native}/geometry.c +15 -15
  119. data/ext/{gsl → gsl_native}/graph.c +37 -87
  120. data/ext/{gsl → gsl_native}/gsl.c +10 -23
  121. data/ext/{gsl → gsl_native}/gsl_narray.c +15 -24
  122. data/ext/{gsl → gsl_native}/histogram.c +123 -150
  123. data/ext/{gsl → gsl_native}/histogram2d.c +71 -96
  124. data/ext/{gsl → gsl_native}/histogram3d.c +72 -72
  125. data/ext/{gsl → gsl_native}/histogram3d_source.c +195 -196
  126. data/ext/{gsl → gsl_native}/histogram_find.c +31 -33
  127. data/ext/{gsl → gsl_native}/histogram_oper.c +43 -52
  128. data/ext/{gsl → gsl_native}/ieee.c +7 -15
  129. data/ext/{gsl → gsl_native}/include/rb_gsl.h +0 -7
  130. data/ext/{gsl → gsl_native}/include/rb_gsl_array.h +15 -25
  131. data/ext/{gsl → gsl_native}/include/rb_gsl_cheb.h +0 -0
  132. data/ext/{gsl → gsl_native}/include/rb_gsl_common.h +44 -52
  133. data/ext/{gsl → gsl_native}/include/rb_gsl_complex.h +0 -0
  134. data/ext/{gsl → gsl_native}/include/rb_gsl_const.h +0 -5
  135. data/ext/{gsl → gsl_native}/include/rb_gsl_dirac.h +0 -0
  136. data/ext/{gsl → gsl_native}/include/rb_gsl_eigen.h +0 -0
  137. data/ext/{gsl → gsl_native}/include/rb_gsl_fft.h +0 -3
  138. data/ext/{gsl → gsl_native}/include/rb_gsl_fit.h +0 -0
  139. data/ext/{gsl → gsl_native}/include/rb_gsl_function.h +0 -0
  140. data/ext/{gsl → gsl_native}/include/rb_gsl_graph.h +2 -2
  141. data/ext/{gsl → gsl_native}/include/rb_gsl_histogram.h +8 -8
  142. data/ext/{gsl → gsl_native}/include/rb_gsl_histogram3d.h +50 -50
  143. data/ext/{gsl → gsl_native}/include/rb_gsl_integration.h +0 -0
  144. data/ext/{gsl → gsl_native}/include/rb_gsl_interp.h +0 -0
  145. data/ext/{gsl → gsl_native}/include/rb_gsl_linalg.h +0 -1
  146. data/ext/{gsl → gsl_native}/include/rb_gsl_math.h +0 -4
  147. data/ext/{gsl → gsl_native}/include/rb_gsl_odeiv.h +0 -0
  148. data/ext/{gsl → gsl_native}/include/rb_gsl_poly.h +3 -3
  149. data/ext/{gsl → gsl_native}/include/rb_gsl_rational.h +1 -1
  150. data/ext/{gsl → gsl_native}/include/rb_gsl_rng.h +0 -0
  151. data/ext/{gsl → gsl_native}/include/rb_gsl_root.h +0 -0
  152. data/ext/{gsl → gsl_native}/include/rb_gsl_sf.h +39 -43
  153. data/ext/{gsl → gsl_native}/include/rb_gsl_statistics.h +0 -0
  154. data/ext/{gsl → gsl_native}/include/rb_gsl_tensor.h +0 -0
  155. data/ext/{gsl → gsl_native}/include/rb_gsl_with_narray.h +0 -0
  156. data/ext/{gsl → gsl_native}/include/templates_off.h +0 -0
  157. data/ext/{gsl → gsl_native}/include/templates_on.h +1 -1
  158. data/ext/{gsl → gsl_native}/integration.c +160 -183
  159. data/ext/{gsl → gsl_native}/interp.c +23 -31
  160. data/ext/gsl_native/jacobi.c +733 -0
  161. data/ext/{gsl → gsl_native}/linalg.c +448 -576
  162. data/ext/{gsl → gsl_native}/linalg_complex.c +84 -98
  163. data/ext/{gsl → gsl_native}/math.c +45 -63
  164. data/ext/{gsl → gsl_native}/matrix.c +4 -6
  165. data/ext/{gsl → gsl_native}/matrix_complex.c +111 -114
  166. data/ext/{gsl → gsl_native}/matrix_double.c +74 -77
  167. data/ext/{gsl → gsl_native}/matrix_int.c +49 -50
  168. data/ext/{gsl/matrix_source.c → gsl_native/matrix_source.h} +280 -302
  169. data/ext/{gsl → gsl_native}/min.c +43 -74
  170. data/ext/{gsl → gsl_native}/monte.c +45 -59
  171. data/ext/{gsl → gsl_native}/multifit.c +138 -147
  172. data/ext/{gsl → gsl_native}/multimin.c +55 -83
  173. data/ext/{gsl → gsl_native}/multimin_fsdf.c +15 -15
  174. data/ext/{gsl → gsl_native}/multiroots.c +61 -64
  175. data/ext/{gsl → gsl_native}/multiset.c +3 -7
  176. data/ext/{gsl → gsl_native}/ndlinear.c +320 -321
  177. data/ext/{gsl → gsl_native}/nmf.c +11 -11
  178. data/ext/{gsl → gsl_native}/nmf_wrap.c +1 -1
  179. data/ext/{gsl → gsl_native}/ntuple.c +13 -13
  180. data/ext/{gsl → gsl_native}/odeiv.c +95 -106
  181. data/ext/gsl_native/ool.c +879 -0
  182. data/ext/{gsl → gsl_native}/permutation.c +36 -34
  183. data/ext/{gsl → gsl_native}/poly.c +2 -5
  184. data/ext/{gsl → gsl_native}/poly2.c +6 -6
  185. data/ext/{gsl/poly_source.c → gsl_native/poly_source.h} +232 -275
  186. data/ext/{gsl → gsl_native}/qrng.c +6 -17
  187. data/ext/{gsl → gsl_native}/randist.c +218 -243
  188. data/ext/{gsl → gsl_native}/rational.c +9 -9
  189. data/ext/{gsl → gsl_native}/rng.c +29 -45
  190. data/ext/{gsl → gsl_native}/root.c +43 -43
  191. data/ext/{gsl → gsl_native}/sf.c +163 -197
  192. data/ext/{gsl → gsl_native}/sf_airy.c +0 -0
  193. data/ext/{gsl → gsl_native}/sf_bessel.c +6 -6
  194. data/ext/{gsl → gsl_native}/sf_clausen.c +0 -0
  195. data/ext/{gsl → gsl_native}/sf_coulomb.c +39 -39
  196. data/ext/{gsl → gsl_native}/sf_coupling.c +29 -29
  197. data/ext/{gsl → gsl_native}/sf_dawson.c +0 -0
  198. data/ext/{gsl → gsl_native}/sf_debye.c +0 -9
  199. data/ext/{gsl → gsl_native}/sf_dilog.c +0 -0
  200. data/ext/{gsl → gsl_native}/sf_elementary.c +2 -2
  201. data/ext/{gsl → gsl_native}/sf_ellint.c +42 -42
  202. data/ext/{gsl → gsl_native}/sf_elljac.c +2 -2
  203. data/ext/{gsl → gsl_native}/sf_erfc.c +0 -4
  204. data/ext/{gsl → gsl_native}/sf_exp.c +2 -2
  205. data/ext/{gsl → gsl_native}/sf_expint.c +1 -11
  206. data/ext/{gsl → gsl_native}/sf_fermi_dirac.c +0 -0
  207. data/ext/{gsl → gsl_native}/sf_gamma.c +1 -5
  208. data/ext/{gsl → gsl_native}/sf_gegenbauer.c +0 -0
  209. data/ext/{gsl → gsl_native}/sf_hyperg.c +0 -0
  210. data/ext/{gsl → gsl_native}/sf_laguerre.c +3 -3
  211. data/ext/{gsl → gsl_native}/sf_lambert.c +0 -0
  212. data/ext/{gsl → gsl_native}/sf_legendre.c +0 -0
  213. data/ext/{gsl → gsl_native}/sf_log.c +3 -3
  214. data/ext/gsl_native/sf_mathieu.c +235 -0
  215. data/ext/{gsl → gsl_native}/sf_power.c +0 -0
  216. data/ext/{gsl → gsl_native}/sf_psi.c +2 -11
  217. data/ext/{gsl → gsl_native}/sf_synchrotron.c +0 -0
  218. data/ext/{gsl → gsl_native}/sf_transport.c +0 -0
  219. data/ext/{gsl → gsl_native}/sf_trigonometric.c +3 -3
  220. data/ext/{gsl → gsl_native}/sf_zeta.c +0 -4
  221. data/ext/{gsl → gsl_native}/signal.c +60 -64
  222. data/ext/{gsl → gsl_native}/siman.c +36 -40
  223. data/ext/{gsl → gsl_native}/sort.c +3 -4
  224. data/ext/{gsl → gsl_native}/spline.c +25 -43
  225. data/ext/{gsl → gsl_native}/stats.c +102 -115
  226. data/ext/{gsl → gsl_native}/sum.c +32 -32
  227. data/ext/{gsl → gsl_native}/tamu_anova.c +0 -0
  228. data/ext/{gsl → gsl_native}/tensor.c +2 -4
  229. data/ext/{gsl/tensor_source.c → gsl_native/tensor_source.h} +144 -144
  230. data/ext/{gsl → gsl_native}/vector.c +2 -4
  231. data/ext/{gsl → gsl_native}/vector_complex.c +165 -171
  232. data/ext/{gsl → gsl_native}/vector_double.c +167 -174
  233. data/ext/{gsl → gsl_native}/vector_int.c +23 -25
  234. data/ext/{gsl/vector_source.c → gsl_native/vector_source.h} +400 -414
  235. data/ext/{gsl → gsl_native}/wavelet.c +215 -236
  236. data/lib/gsl.rb +1 -7
  237. data/lib/gsl/gnuplot.rb +2 -2
  238. data/lib/gsl/version.rb +1 -3
  239. data/rb-gsl.gemspec +29 -0
  240. data/rdoc/blas.rdoc +3 -3
  241. data/rdoc/bspline.rdoc +7 -7
  242. data/rdoc/cheb.rdoc +8 -8
  243. data/rdoc/cholesky_complex.rdoc +1 -1
  244. data/rdoc/combi.rdoc +9 -9
  245. data/rdoc/complex.rdoc +11 -11
  246. data/rdoc/const.rdoc +20 -20
  247. data/rdoc/dht.rdoc +6 -6
  248. data/rdoc/diff.rdoc +6 -6
  249. data/rdoc/ehandling.rdoc +3 -3
  250. data/rdoc/eigen.rdoc +11 -11
  251. data/rdoc/fft.rdoc +26 -26
  252. data/rdoc/fit.rdoc +18 -18
  253. data/rdoc/graph.rdoc +2 -2
  254. data/rdoc/hist.rdoc +16 -16
  255. data/rdoc/hist2d.rdoc +4 -4
  256. data/rdoc/hist3d.rdoc +3 -3
  257. data/rdoc/integration.rdoc +16 -16
  258. data/rdoc/interp.rdoc +11 -11
  259. data/rdoc/intro.rdoc +3 -3
  260. data/rdoc/linalg.rdoc +20 -20
  261. data/rdoc/linalg_complex.rdoc +1 -1
  262. data/rdoc/math.rdoc +13 -13
  263. data/rdoc/matrix.rdoc +22 -22
  264. data/rdoc/min.rdoc +9 -9
  265. data/rdoc/monte.rdoc +3 -3
  266. data/rdoc/multimin.rdoc +12 -12
  267. data/rdoc/multiroot.rdoc +12 -12
  268. data/rdoc/narray.rdoc +9 -9
  269. data/rdoc/ndlinear.rdoc +4 -4
  270. data/rdoc/nonlinearfit.rdoc +17 -17
  271. data/rdoc/ntuple.rdoc +5 -5
  272. data/rdoc/odeiv.rdoc +12 -12
  273. data/rdoc/perm.rdoc +11 -11
  274. data/rdoc/poly.rdoc +17 -17
  275. data/rdoc/qrng.rdoc +9 -9
  276. data/rdoc/randist.rdoc +10 -10
  277. data/rdoc/ref.rdoc +49 -49
  278. data/rdoc/rng.rdoc +9 -9
  279. data/rdoc/roots.rdoc +12 -12
  280. data/rdoc/sf.rdoc +35 -35
  281. data/rdoc/siman.rdoc +3 -3
  282. data/rdoc/sort.rdoc +6 -6
  283. data/rdoc/start.rdoc +2 -2
  284. data/rdoc/stats.rdoc +13 -13
  285. data/rdoc/sum.rdoc +4 -4
  286. data/rdoc/tensor.rdoc +3 -3
  287. data/rdoc/tut.rdoc +1 -1
  288. data/rdoc/use.rdoc +3 -3
  289. data/rdoc/vector.rdoc +28 -28
  290. data/rdoc/vector_complex.rdoc +6 -6
  291. data/rdoc/wavelet.rdoc +8 -8
  292. data/test/gsl/blas_test.rb +1 -1
  293. data/test/gsl/index_test.rb +61 -0
  294. data/test/gsl/matrix_test.rb +21 -0
  295. data/uncrustify.cfg +1693 -0
  296. metadata +212 -243
  297. data/README +0 -28
  298. data/ext/gsl/bspline.c +0 -130
  299. data/ext/gsl/const.c +0 -672
  300. data/ext/gsl/cqp.c +0 -283
  301. data/ext/gsl/fcmp.c +0 -64
  302. data/ext/gsl/fresnel.c +0 -312
  303. data/ext/gsl/jacobi.c +0 -739
  304. data/ext/gsl/ool.c +0 -879
  305. data/ext/gsl/oper_complex_source.c +0 -251
  306. data/ext/gsl/sf_mathieu.c +0 -238
  307. data/rdoc/index.rdoc +0 -50
data/rdoc/index.rdoc DELETED
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- #
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- # = {Ruby/GSL}[link:index.html]
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- #
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- # Permission is granted to copy, distribute and/or modify this document under the terms of the GNU Free Documentation License.
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- #
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- # == Description
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- # {Ruby/GSL}[https://blackwinter.github.com/rb-gsl] is a ruby interface to the {GNU Scientific Library}[https://gnu.org/software/gsl/] (GSL), for numerical computing with {Ruby}[http://www.ruby-lang.org/en/].
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- #
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- # == Installation
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- # === Using the gem command
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- # Ruby/GSL may now be installed as a Ruby Gem by simply running
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- #
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- # gem install rb-gsl
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- #
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- # Note that the GSL libraries must already be installed before Ruby/GSL
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- # can be installed.
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- #
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- # * It is recommended to install the
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- # {GNU plotutils}[https://gnu.org/software/plotutils/plotutils.html]
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- # package. Some of the example scripts in the 'examples/' directory use the
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- # <tt>graph</tt> utility included in the package to plot the results.
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- # Windows-cygwin binaries of <tt>GNU plotutils</tt> and related packages are
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- # available from {here}[http://gnuwin32.sourceforge.net/packages/plotutils.htm].
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- #
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- # == Reference
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- #
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- # The {Ruby/GSL reference manual}[link:ref_rdoc.html] follows and borrows
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- # large parts of the GSL reference manual.
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- #
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- # == Examples
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- # See scripts in <tt>examples/</tt> and <tt>tests/</tt> directories.
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- #
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- # == Related Projects
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- # * {ruby-gsl:}[http://ruby-gsl.sourceforge.net/]
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- # Another Ruby binding, developed by Arno Erpenbeck.
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- #
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- # == Licence
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- # Ruby/GSL is free software: you can redistribute it and/or modify it
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- # under the terms of the GNU General Public License.
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- # This library is distributed in the hope that it will be useful, but
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- # WITHOUT ANY WARRANTY.
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- #
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- # == Bug Report
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- # If you encounter bugs in Ruby/GSL, please e-mail to me, or
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- # submit reports on {GitHub}[https://github.com/blackwinter/rb-gsl/issues].
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- #
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- # == Authors
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- # Yoshiki Tsunesada:: July, 2004
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- # David MacMahon:: November, 2010
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- # Jens Wille:: November, 2013