pnmatrix 1.2.4
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- checksums.yaml +7 -0
- data/ext/nmatrix/binary_format.txt +53 -0
- data/ext/nmatrix/data/complex.h +388 -0
- data/ext/nmatrix/data/data.cpp +274 -0
- data/ext/nmatrix/data/data.h +651 -0
- data/ext/nmatrix/data/meta.h +64 -0
- data/ext/nmatrix/data/ruby_object.h +386 -0
- data/ext/nmatrix/extconf.rb +70 -0
- data/ext/nmatrix/math/asum.h +99 -0
- data/ext/nmatrix/math/cblas_enums.h +36 -0
- data/ext/nmatrix/math/cblas_templates_core.h +507 -0
- data/ext/nmatrix/math/gemm.h +241 -0
- data/ext/nmatrix/math/gemv.h +178 -0
- data/ext/nmatrix/math/getrf.h +255 -0
- data/ext/nmatrix/math/getrs.h +121 -0
- data/ext/nmatrix/math/imax.h +82 -0
- data/ext/nmatrix/math/laswp.h +165 -0
- data/ext/nmatrix/math/long_dtype.h +62 -0
- data/ext/nmatrix/math/magnitude.h +54 -0
- data/ext/nmatrix/math/math.h +751 -0
- data/ext/nmatrix/math/nrm2.h +165 -0
- data/ext/nmatrix/math/rot.h +117 -0
- data/ext/nmatrix/math/rotg.h +106 -0
- data/ext/nmatrix/math/scal.h +71 -0
- data/ext/nmatrix/math/trsm.h +336 -0
- data/ext/nmatrix/math/util.h +162 -0
- data/ext/nmatrix/math.cpp +1368 -0
- data/ext/nmatrix/nm_memory.h +60 -0
- data/ext/nmatrix/nmatrix.cpp +285 -0
- data/ext/nmatrix/nmatrix.h +476 -0
- data/ext/nmatrix/ruby_constants.cpp +151 -0
- data/ext/nmatrix/ruby_constants.h +106 -0
- data/ext/nmatrix/ruby_nmatrix.c +3130 -0
- data/ext/nmatrix/storage/common.cpp +77 -0
- data/ext/nmatrix/storage/common.h +183 -0
- data/ext/nmatrix/storage/dense/dense.cpp +1096 -0
- data/ext/nmatrix/storage/dense/dense.h +129 -0
- data/ext/nmatrix/storage/list/list.cpp +1628 -0
- data/ext/nmatrix/storage/list/list.h +138 -0
- data/ext/nmatrix/storage/storage.cpp +730 -0
- data/ext/nmatrix/storage/storage.h +99 -0
- data/ext/nmatrix/storage/yale/class.h +1139 -0
- data/ext/nmatrix/storage/yale/iterators/base.h +143 -0
- data/ext/nmatrix/storage/yale/iterators/iterator.h +131 -0
- data/ext/nmatrix/storage/yale/iterators/row.h +450 -0
- data/ext/nmatrix/storage/yale/iterators/row_stored.h +140 -0
- data/ext/nmatrix/storage/yale/iterators/row_stored_nd.h +169 -0
- data/ext/nmatrix/storage/yale/iterators/stored_diagonal.h +124 -0
- data/ext/nmatrix/storage/yale/math/transpose.h +110 -0
- data/ext/nmatrix/storage/yale/yale.cpp +2074 -0
- data/ext/nmatrix/storage/yale/yale.h +203 -0
- data/ext/nmatrix/types.h +55 -0
- data/ext/nmatrix/util/io.cpp +279 -0
- data/ext/nmatrix/util/io.h +115 -0
- data/ext/nmatrix/util/sl_list.cpp +627 -0
- data/ext/nmatrix/util/sl_list.h +144 -0
- data/ext/nmatrix/util/util.h +78 -0
- data/lib/nmatrix/blas.rb +378 -0
- data/lib/nmatrix/cruby/math.rb +744 -0
- data/lib/nmatrix/enumerate.rb +253 -0
- data/lib/nmatrix/homogeneous.rb +241 -0
- data/lib/nmatrix/io/fortran_format.rb +138 -0
- data/lib/nmatrix/io/harwell_boeing.rb +221 -0
- data/lib/nmatrix/io/market.rb +263 -0
- data/lib/nmatrix/io/point_cloud.rb +189 -0
- data/lib/nmatrix/jruby/decomposition.rb +24 -0
- data/lib/nmatrix/jruby/enumerable.rb +13 -0
- data/lib/nmatrix/jruby/error.rb +4 -0
- data/lib/nmatrix/jruby/math.rb +501 -0
- data/lib/nmatrix/jruby/nmatrix_java.rb +840 -0
- data/lib/nmatrix/jruby/operators.rb +283 -0
- data/lib/nmatrix/jruby/slice.rb +264 -0
- data/lib/nmatrix/lapack_core.rb +181 -0
- data/lib/nmatrix/lapack_plugin.rb +44 -0
- data/lib/nmatrix/math.rb +953 -0
- data/lib/nmatrix/mkmf.rb +100 -0
- data/lib/nmatrix/monkeys.rb +137 -0
- data/lib/nmatrix/nmatrix.rb +1172 -0
- data/lib/nmatrix/rspec.rb +75 -0
- data/lib/nmatrix/shortcuts.rb +1163 -0
- data/lib/nmatrix/version.rb +39 -0
- data/lib/nmatrix/yale_functions.rb +118 -0
- data/lib/nmatrix.rb +28 -0
- data/spec/00_nmatrix_spec.rb +892 -0
- data/spec/01_enum_spec.rb +196 -0
- data/spec/02_slice_spec.rb +407 -0
- data/spec/03_nmatrix_monkeys_spec.rb +80 -0
- data/spec/2x2_dense_double.mat +0 -0
- data/spec/4x4_sparse.mat +0 -0
- data/spec/4x5_dense.mat +0 -0
- data/spec/blas_spec.rb +215 -0
- data/spec/elementwise_spec.rb +311 -0
- data/spec/homogeneous_spec.rb +100 -0
- data/spec/io/fortran_format_spec.rb +88 -0
- data/spec/io/harwell_boeing_spec.rb +98 -0
- data/spec/io/test.rua +9 -0
- data/spec/io_spec.rb +159 -0
- data/spec/lapack_core_spec.rb +482 -0
- data/spec/leakcheck.rb +16 -0
- data/spec/math_spec.rb +1363 -0
- data/spec/nmatrix_yale_resize_test_associations.yaml +2802 -0
- data/spec/nmatrix_yale_spec.rb +286 -0
- data/spec/rspec_monkeys.rb +56 -0
- data/spec/rspec_spec.rb +35 -0
- data/spec/shortcuts_spec.rb +474 -0
- data/spec/slice_set_spec.rb +162 -0
- data/spec/spec_helper.rb +172 -0
- data/spec/stat_spec.rb +214 -0
- data/spec/test.pcd +20 -0
- data/spec/utm5940.mtx +83844 -0
- metadata +295 -0
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/////////////////////////////////////////////////////////////////////
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// = NMatrix
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//
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// A linear algebra library for scientific computation in Ruby.
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// NMatrix is part of SciRuby.
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//
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// NMatrix was originally inspired by and derived from NArray, by
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// Masahiro Tanaka: http://narray.rubyforge.org
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//
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// == Copyright Information
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//
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// SciRuby is Copyright (c) 2010 - 2014, Ruby Science Foundation
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// NMatrix is Copyright (c) 2012 - 2014, John Woods and the Ruby Science Foundation
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//
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// Please see LICENSE.txt for additional copyright notices.
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//
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// == Contributing
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//
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// By contributing source code to SciRuby, you agree to be bound by
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// our Contributor Agreement:
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//
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// * https://github.com/SciRuby/sciruby/wiki/Contributor-Agreement
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//
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// == data.cpp
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//
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// Functions and data for dealing the data types.
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/*
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* Standard Includes
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*/
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#include <ruby.h>
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#include <stdexcept>
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/*
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* Project Includes
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*/
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#include "types.h"
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#include "data.h"
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/*
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* Global Variables
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*/
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namespace nm {
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const char* const EWOP_OPS[nm::NUM_EWOPS] = {
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"+",
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"-",
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"*",
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"/",
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"**",
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"%",
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"==",
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"!=",
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"<",
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">",
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"<=",
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">="
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};
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const std::string EWOP_NAMES[nm::NUM_EWOPS] = {
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"add",
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"sub",
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"mul",
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"div",
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"pow",
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"mod",
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"eqeq",
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"neq",
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"lt",
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"gt",
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"leq",
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"geq"
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};
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const std::string NONCOM_EWOP_NAMES[nm::NUM_NONCOM_EWOPS] = {
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"atan2",
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"ldexp",
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"hypot"
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};
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const std::string UNARYOPS[nm::NUM_UNARYOPS] = {
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"sin", "cos", "tan",
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"asin", "acos", "atan",
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"sinh", "cosh", "tanh",
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"asinh", "acosh", "atanh",
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"exp", "log2",
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"log10", "sqrt", "erf",
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"erfc", "cbrt", "gamma",
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"negate", "floor", "ceil", "round"
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};
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/*
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* Create a RubyObject from a regular C value (given a dtype). Does not return a VALUE! To get a VALUE, you need to
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* look at the rval property of what this function returns.
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*/
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nm::RubyObject rubyobj_from_cval(void* val, nm::dtype_t dtype) {
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using namespace nm;
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switch (dtype) {
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case BYTE:
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return RubyObject(*reinterpret_cast<uint8_t*>(val));
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case INT8:
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return RubyObject(*reinterpret_cast<int8_t*>(val));
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case INT16:
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return RubyObject(*reinterpret_cast<int16_t*>(val));
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case INT32:
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return RubyObject(*reinterpret_cast<int32_t*>(val));
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case INT64:
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return RubyObject(*reinterpret_cast<int64_t*>(val));
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case FLOAT32:
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return RubyObject(*reinterpret_cast<float32_t*>(val));
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case FLOAT64:
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return RubyObject(*reinterpret_cast<float64_t*>(val));
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case COMPLEX64:
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return RubyObject(*reinterpret_cast<Complex64*>(val));
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case COMPLEX128:
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return RubyObject(*reinterpret_cast<Complex128*>(val));
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default:
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try {
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throw std::logic_error("Cannot create ruby object");
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}
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catch (std::logic_error err) {
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printf("%s\n", err.what());
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}
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rb_raise(nm_eDataTypeError, "Conversion to RubyObject requested from unknown/invalid data type (did you try to convert from a VALUE?)");
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}
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return Qnil;
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}
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} // end of namespace nm
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extern "C" {
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const char* const DTYPE_NAMES[nm::NUM_DTYPES] = {
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"byte",
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"int8",
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"int16",
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"int32",
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"int64",
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"float32",
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"float64",
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"complex64",
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"complex128",
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"object"
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};
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const size_t DTYPE_SIZES[nm::NUM_DTYPES] = {
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sizeof(uint8_t),
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sizeof(int8_t),
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sizeof(int16_t),
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sizeof(int32_t),
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sizeof(int64_t),
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sizeof(float32_t),
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sizeof(float64_t),
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sizeof(nm::Complex64),
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sizeof(nm::Complex128),
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sizeof(nm::RubyObject)
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};
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const nm::dtype_t Upcast[nm::NUM_DTYPES][nm::NUM_DTYPES] = {
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{ nm::BYTE, nm::INT16, nm::INT16, nm::INT32, nm::INT64, nm::FLOAT32, nm::FLOAT64, nm::COMPLEX64, nm::COMPLEX128, nm::RUBYOBJ},
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{ nm::INT16, nm::INT8, nm::INT16, nm::INT32, nm::INT64, nm::FLOAT32, nm::FLOAT64, nm::COMPLEX64, nm::COMPLEX128, nm::RUBYOBJ},
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{ nm::INT16, nm::INT16, nm::INT16, nm::INT32, nm::INT64, nm::FLOAT32, nm::FLOAT64, nm::COMPLEX64, nm::COMPLEX128, nm::RUBYOBJ},
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{ nm::INT32, nm::INT32, nm::INT32, nm::INT32, nm::INT64, nm::FLOAT32, nm::FLOAT64, nm::COMPLEX64, nm::COMPLEX128, nm::RUBYOBJ},
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{ nm::INT64, nm::INT64, nm::INT64, nm::INT64, nm::INT64, nm::FLOAT32, nm::FLOAT64, nm::COMPLEX64, nm::COMPLEX128, nm::RUBYOBJ},
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{ nm::FLOAT32, nm::FLOAT32, nm::FLOAT32, nm::FLOAT32, nm::FLOAT32, nm::FLOAT32, nm::FLOAT64, nm::COMPLEX64, nm::COMPLEX128, nm::RUBYOBJ},
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{ nm::FLOAT64, nm::FLOAT64, nm::FLOAT64, nm::FLOAT64, nm::FLOAT64, nm::FLOAT64, nm::FLOAT64, nm::COMPLEX128, nm::COMPLEX128, nm::RUBYOBJ},
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{ nm::COMPLEX64, nm::COMPLEX64, nm::COMPLEX64, nm::COMPLEX64, nm::COMPLEX64, nm::COMPLEX64, nm::COMPLEX128, nm::COMPLEX64, nm::COMPLEX128, nm::RUBYOBJ},
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{ nm::COMPLEX128, nm::COMPLEX128, nm::COMPLEX128, nm::COMPLEX128, nm::COMPLEX128, nm::COMPLEX128, nm::COMPLEX128, nm::COMPLEX128, nm::COMPLEX128, nm::RUBYOBJ},
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{ nm::RUBYOBJ, nm::RUBYOBJ, nm::RUBYOBJ, nm::RUBYOBJ, nm::RUBYOBJ, nm::RUBYOBJ, nm::RUBYOBJ, nm::RUBYOBJ, nm::RUBYOBJ, nm::RUBYOBJ}
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};
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/*
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* Forward Declarations
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*/
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/*
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* Functions
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*/
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/*
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* Converts a RubyObject
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*/
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void rubyval_to_cval(VALUE val, nm::dtype_t dtype, void* loc) {
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using namespace nm;
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switch (dtype) {
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case nm::BYTE:
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*reinterpret_cast<uint8_t*>(loc) = static_cast<uint8_t>(RubyObject(val));
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break;
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case nm::INT8:
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*reinterpret_cast<int8_t*>(loc) = static_cast<int8_t>(RubyObject(val));
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break;
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case nm::INT16:
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*reinterpret_cast<int16_t*>(loc) = static_cast<int16_t>(RubyObject(val));
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break;
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case nm::INT32:
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*reinterpret_cast<int32_t*>(loc) = static_cast<int32_t>(RubyObject(val));
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break;
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case nm::INT64:
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*reinterpret_cast<int64_t*>(loc) = static_cast<int64_t>(RubyObject(val));
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break;
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case nm::FLOAT32:
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*reinterpret_cast<float32_t*>(loc) = static_cast<float32_t>(RubyObject(val));
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break;
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case nm::FLOAT64:
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*reinterpret_cast<float64_t*>(loc) = static_cast<float64_t>(RubyObject(val));
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break;
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case nm::COMPLEX64:
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*reinterpret_cast<Complex64*>(loc) = RubyObject(val).to<Complex64>();
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break;
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case nm::COMPLEX128:
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*reinterpret_cast<Complex128*>(loc) = RubyObject(val).to<Complex128>();
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break;
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case RUBYOBJ:
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*reinterpret_cast<VALUE*>(loc) = val;
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//rb_raise(rb_eTypeError, "Attempting a bad conversion from a Ruby value.");
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break;
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default:
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rb_raise(rb_eTypeError, "Attempting a bad conversion.");
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break;
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}
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}
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/*
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* Allocate and return a piece of data of the correct dtype, converted from a
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* given RubyObject.
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*/
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void* rubyobj_to_cval(VALUE val, nm::dtype_t dtype) {
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size_t size = DTYPE_SIZES[dtype];
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NM_CONSERVATIVE(nm_register_value(&val));
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void* ret_val = NM_ALLOC_N(char, size);
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rubyval_to_cval(val, dtype, ret_val);
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NM_CONSERVATIVE(nm_unregister_value(&val));
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return ret_val;
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}
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void nm_init_data() {
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volatile VALUE t = INT2FIX(1);
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volatile nm::RubyObject obj(t);
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volatile nm::Complex64 a(const_cast<nm::RubyObject&>(obj));
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volatile nm::Complex128 b(const_cast<nm::RubyObject&>(obj));
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}
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+
|
273
|
+
|
274
|
+
} // end of extern "C" block
|