pharmaobservatory 0.1.7 → 0.1.8
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/README.md +83 -4
- data/docs/BiomarkerAlleleFrequenciesResponse.md +58 -0
- data/docs/BiomarkerAlleleFrequenciesRow.md +62 -0
- data/docs/BiomarkerAssayProvidersResponse.md +58 -0
- data/docs/BiomarkerAssayProvidersRow.md +72 -0
- data/docs/BiomarkerEvidenceByYearResponse.md +58 -0
- data/docs/BiomarkerEvidenceByYearRow.md +32 -0
- data/docs/BiomarkerTraversalStatusResponse.md +58 -0
- data/docs/BiomarkerTraversalStatusRow.md +36 -0
- data/docs/BiomarkersApi.md +320 -0
- data/docs/CompaniesApi.md +1001 -99
- data/docs/CompanyAssetsRow.md +5 -1
- data/docs/CompanyBiomarkerCapabilityResponse.md +58 -0
- data/docs/CompanyBiomarkerCapabilityRow.md +68 -0
- data/docs/CompanyProgramsRow.md +5 -1
- data/docs/CompanyRareDiseaseDeclarationsResponse.md +58 -0
- data/docs/CompanyRareDiseaseDeclarationsRow.md +52 -0
- data/docs/GxpFacilitiesRow.md +22 -0
- data/docs/LegalEntitiesApi.md +981 -101
- data/docs/LegalEntitiesRecordAttributes.md +6 -0
- data/docs/LegalEntitySecFilingsResponse.md +58 -0
- data/docs/LegalEntitySecFilingsRow.md +44 -0
- data/docs/OrgDisclosureTrendResponse.md +58 -0
- data/docs/OrgDisclosureTrendRow.md +62 -0
- data/docs/OwnershipSourceCoverageResponse.md +58 -0
- data/docs/OwnershipSourceCoverageRow.md +62 -0
- data/docs/ProgramLicensingCandidatesRow.md +5 -1
- data/docs/ProgramsRow.md +1 -1
- data/docs/RwdConductorDeliveryResponse.md +58 -0
- data/docs/RwdConductorDeliveryRow.md +74 -0
- data/docs/RwdConductorFootprintResponse.md +58 -0
- data/docs/RwdConductorFootprintRow.md +40 -0
- data/docs/RwdConductorStudiesResponse.md +58 -0
- data/docs/RwdConductorStudiesRow.md +42 -0
- data/docs/RwdConductorsApi.md +393 -0
- data/docs/RwdConductorsRecord.md +38 -0
- data/docs/RwdConductorsResponse.md +58 -0
- data/docs/RwdConductorsRow.md +72 -0
- data/docs/RwdInstitutionsApi.md +153 -0
- data/docs/RwdInstitutionsRecord.md +38 -0
- data/docs/RwdInstitutionsResponse.md +58 -0
- data/docs/RwdInstitutionsRow.md +154 -0
- data/docs/RwdNetworksApi.md +153 -0
- data/docs/RwdNetworksRecord.md +38 -0
- data/docs/RwdNetworksResponse.md +58 -0
- data/docs/RwdNetworksRow.md +110 -0
- data/docs/RwdStudiesApi.md +80 -0
- data/docs/SbtiCrosscheckResponse.md +58 -0
- data/docs/SbtiCrosscheckRow.md +48 -0
- data/docs/SponsorDeliveryResponse.md +58 -0
- data/docs/SponsorDeliveryRow.md +52 -0
- data/docs/SponsorPatentMentionsResponse.md +58 -0
- data/docs/SponsorPatentMentionsRow.md +42 -0
- data/docs/SponsorTrialConditionsResponse.md +58 -0
- data/docs/SponsorTrialConditionsRow.md +36 -0
- data/docs/SponsorTrialDrugsResponse.md +58 -0
- data/docs/SponsorTrialDrugsRow.md +34 -0
- data/lib/pharmaobservatory/api/biomarkers_api.rb +336 -0
- data/lib/pharmaobservatory/api/companies_api.rb +1131 -130
- data/lib/pharmaobservatory/api/legal_entities_api.rb +1047 -123
- data/lib/pharmaobservatory/api/rwd_conductors_api.rb +413 -0
- data/lib/pharmaobservatory/api/rwd_institutions_api.rb +161 -0
- data/lib/pharmaobservatory/api/rwd_networks_api.rb +161 -0
- data/lib/pharmaobservatory/api/rwd_studies_api.rb +84 -0
- data/lib/pharmaobservatory/models/biomarker_allele_frequencies_response.rb +478 -0
- data/lib/pharmaobservatory/models/biomarker_allele_frequencies_row.rb +465 -0
- data/lib/pharmaobservatory/models/biomarker_assay_providers_response.rb +478 -0
- data/lib/pharmaobservatory/models/biomarker_assay_providers_row.rb +520 -0
- data/lib/pharmaobservatory/models/biomarker_evidence_by_year_response.rb +478 -0
- data/lib/pharmaobservatory/models/biomarker_evidence_by_year_row.rb +300 -0
- data/lib/pharmaobservatory/models/biomarker_traversal_status_response.rb +478 -0
- data/lib/pharmaobservatory/models/biomarker_traversal_status_row.rb +322 -0
- data/lib/pharmaobservatory/models/company_assets_row.rb +24 -2
- data/lib/pharmaobservatory/models/company_biomarker_capability_response.rb +478 -0
- data/lib/pharmaobservatory/models/company_biomarker_capability_row.rb +498 -0
- data/lib/pharmaobservatory/models/company_programs_row.rb +24 -2
- data/lib/pharmaobservatory/models/company_rare_disease_declarations_response.rb +478 -0
- data/lib/pharmaobservatory/models/company_rare_disease_declarations_row.rb +410 -0
- data/lib/pharmaobservatory/models/gxp_facilities_row.rb +122 -1
- data/lib/pharmaobservatory/models/legal_entities_record_attributes.rb +28 -1
- data/lib/pharmaobservatory/models/legal_entity_sec_filings_response.rb +478 -0
- data/lib/pharmaobservatory/models/legal_entity_sec_filings_row.rb +370 -0
- data/lib/pharmaobservatory/models/org_disclosure_trend_response.rb +478 -0
- data/lib/pharmaobservatory/models/org_disclosure_trend_row.rb +465 -0
- data/lib/pharmaobservatory/models/ownership_source_coverage_response.rb +478 -0
- data/lib/pharmaobservatory/models/ownership_source_coverage_row.rb +465 -0
- data/lib/pharmaobservatory/models/program_licensing_candidates_row.rb +24 -2
- data/lib/pharmaobservatory/models/programs_row.rb +1 -1
- data/lib/pharmaobservatory/models/rwd_conductor_delivery_response.rb +478 -0
- data/lib/pharmaobservatory/models/rwd_conductor_delivery_row.rb +537 -0
- data/lib/pharmaobservatory/models/rwd_conductor_footprint_response.rb +478 -0
- data/lib/pharmaobservatory/models/rwd_conductor_footprint_row.rb +346 -0
- data/lib/pharmaobservatory/models/rwd_conductor_studies_response.rb +478 -0
- data/lib/pharmaobservatory/models/rwd_conductor_studies_row.rb +355 -0
- data/lib/pharmaobservatory/models/rwd_conductors_record.rb +385 -0
- data/lib/pharmaobservatory/models/rwd_conductors_response.rb +478 -0
- data/lib/pharmaobservatory/models/rwd_conductors_row.rb +526 -0
- data/lib/pharmaobservatory/models/rwd_institutions_record.rb +385 -0
- data/lib/pharmaobservatory/models/rwd_institutions_response.rb +478 -0
- data/lib/pharmaobservatory/models/rwd_institutions_row.rb +981 -0
- data/lib/pharmaobservatory/models/rwd_networks_record.rb +385 -0
- data/lib/pharmaobservatory/models/rwd_networks_response.rb +478 -0
- data/lib/pharmaobservatory/models/rwd_networks_row.rb +733 -0
- data/lib/pharmaobservatory/models/sbti_crosscheck_response.rb +478 -0
- data/lib/pharmaobservatory/models/sbti_crosscheck_row.rb +388 -0
- data/lib/pharmaobservatory/models/sponsor_delivery_response.rb +478 -0
- data/lib/pharmaobservatory/models/sponsor_delivery_row.rb +410 -0
- data/lib/pharmaobservatory/models/sponsor_patent_mentions_response.rb +478 -0
- data/lib/pharmaobservatory/models/sponsor_patent_mentions_row.rb +355 -0
- data/lib/pharmaobservatory/models/sponsor_trial_conditions_response.rb +478 -0
- data/lib/pharmaobservatory/models/sponsor_trial_conditions_row.rb +322 -0
- data/lib/pharmaobservatory/models/sponsor_trial_drugs_response.rb +478 -0
- data/lib/pharmaobservatory/models/sponsor_trial_drugs_row.rb +311 -0
- data/lib/pharmaobservatory/version.rb +1 -1
- data/lib/pharmaobservatory.rb +46 -0
- metadata +94 -2
checksums.yaml
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metadata.gz:
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data.tar.gz: be33094727bbbed2f2b6c9bc76a2d4b718a0a21fccf88e0b6fd7cea2805b99ddf291743c9764a69a7fe8713b03582a8ad9b1124cb1ec434d19ecef86aba384e2
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data/README.md
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This SDK is automatically generated by the [OpenAPI Generator](https://openapi-generator.tech) project:
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- API version: 1.0.0
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- Package version: 0.1.
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- Package version: 0.1.8
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- Generator version: 7.13.0
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- Build package: org.openapitools.codegen.languages.RubyClientCodegen
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Then either install the gem locally:
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```shell
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gem install ./pharmaobservatory-0.1.
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gem install ./pharmaobservatory-0.1.8.gem
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```
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(for development, run `gem install --dev ./pharmaobservatory-0.1.
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(for development, run `gem install --dev ./pharmaobservatory-0.1.8.gem` to install the development dependencies)
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or publish the gem to a gem hosting service, e.g. [RubyGems](https://rubygems.org/).
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Finally add this to the Gemfile:
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gem 'pharmaobservatory', '~> 0.1.
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gem 'pharmaobservatory', '~> 0.1.8'
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### Install from Git
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Class | Method | HTTP request | Description
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------------ | ------------- | ------------- | -------------
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*PharmaObservatory::ApiV1BaseApi* | [**api_v1_whoami_get**](docs/ApiV1BaseApi.md#api_v1_whoami_get) | **GET** /api/v1/whoami | whoami
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*PharmaObservatory::BiomarkersApi* | [**biomarkers_biomarker_allele_frequencies**](docs/BiomarkersApi.md#biomarkers_biomarker_allele_frequencies) | **GET** /api/v1/biomarkers/{id}/biomarker_allele_frequencies | Population allele frequency of protein variants (gnomAD)
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*PharmaObservatory::BiomarkersApi* | [**biomarkers_biomarker_assay_evidence**](docs/BiomarkersApi.md#biomarkers_biomarker_assay_evidence) | **GET** /api/v1/biomarkers/{id}/biomarker_assay_evidence | Biomarker assay evidence from the literature
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*PharmaObservatory::BiomarkersApi* | [**biomarkers_biomarker_assay_providers**](docs/BiomarkersApi.md#biomarkers_biomarker_assay_providers) | **GET** /api/v1/biomarkers/{id}/biomarker_assay_providers | Biomarker assay providers (from validating papers)
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*PharmaObservatory::BiomarkersApi* | [**biomarkers_biomarker_assay_whitespace**](docs/BiomarkersApi.md#biomarkers_biomarker_assay_whitespace) | **GET** /api/v1/biomarkers/{id}/biomarker_assay_whitespace | Biomarker assay whitespace (evidence against supplier supply)
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*PharmaObservatory::BiomarkersApi* | [**biomarkers_biomarker_bqp_assertions**](docs/BiomarkersApi.md#biomarkers_biomarker_bqp_assertions) | **GET** /api/v1/biomarkers/{id}/biomarker_bqp_assertions | FDA biomarker qualification projects
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*PharmaObservatory::BiomarkersApi* | [**biomarkers_biomarker_cdx_assertions**](docs/BiomarkersApi.md#biomarkers_biomarker_cdx_assertions) | **GET** /api/v1/biomarkers/{id}/biomarker_cdx_assertions | FDA companion diagnostic assertions
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*PharmaObservatory::BiomarkersApi* | [**biomarkers_biomarker_evidence**](docs/BiomarkersApi.md#biomarkers_biomarker_evidence) | **GET** /api/v1/biomarkers/{id}/biomarker_evidence | Biomarker evidence
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*PharmaObservatory::BiomarkersApi* | [**biomarkers_biomarker_evidence_by_year**](docs/BiomarkersApi.md#biomarkers_biomarker_evidence_by_year) | **GET** /api/v1/biomarkers/{id}/biomarker_evidence_by_year | Biomarker evidence by year (trial and publication mentions)
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*PharmaObservatory::BiomarkersApi* | [**biomarkers_biomarker_literature**](docs/BiomarkersApi.md#biomarkers_biomarker_literature) | **GET** /api/v1/biomarkers/{id}/biomarker_literature | Trial-cited literature mentions
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*PharmaObservatory::BiomarkersApi* | [**biomarkers_biomarker_publishing_companies**](docs/BiomarkersApi.md#biomarkers_biomarker_publishing_companies) | **GET** /api/v1/biomarkers/{id}/biomarker_publishing_companies | Companies publishing on a biomarker
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*PharmaObservatory::BiomarkersApi* | [**biomarkers_biomarker_relations**](docs/BiomarkersApi.md#biomarkers_biomarker_relations) | **GET** /api/v1/biomarkers/{id}/biomarker_relations | Literature-extracted relations
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*PharmaObservatory::BiomarkersApi* | [**biomarkers_biomarker_sample_coverage**](docs/BiomarkersApi.md#biomarkers_biomarker_sample_coverage) | **GET** /api/v1/biomarkers/{id}/biomarker_sample_coverage | Human sample screening coverage (GDC)
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*PharmaObservatory::BiomarkersApi* | [**biomarkers_biomarker_sample_prevalence**](docs/BiomarkersApi.md#biomarkers_biomarker_sample_prevalence) | **GET** /api/v1/biomarkers/{id}/biomarker_sample_prevalence | Human sample screening reference (GDC cohorts)
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*PharmaObservatory::BiomarkersApi* | [**biomarkers_biomarker_traversal_status**](docs/BiomarkersApi.md#biomarkers_biomarker_traversal_status) | **GET** /api/v1/biomarkers/{id}/biomarker_traversal_status | Biomarker coverage by traversal
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*PharmaObservatory::BiomarkersApi* | [**biomarkers_biomarker_validation**](docs/BiomarkersApi.md#biomarkers_biomarker_validation) | **GET** /api/v1/biomarkers/{id}/biomarker_validation | Biomarker validation ladder
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*PharmaObservatory::BiomarkersApi* | [**biomarkers_biomarker_variant_mentions**](docs/BiomarkersApi.md#biomarkers_biomarker_variant_mentions) | **GET** /api/v1/biomarkers/{id}/biomarker_variant_mentions | Protein variant mentions
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*PharmaObservatory::BiomarkersApi* | [**biomarkers_get**](docs/BiomarkersApi.md#biomarkers_get) | **GET** /api/v1/biomarkers/{id} | One biomarker
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*PharmaObservatory::CompaniesApi* | [**companies_catalysts**](docs/CompaniesApi.md#companies_catalysts) | **GET** /api/v1/companies/{id}/catalysts | Catalysts: trial readouts, patent cliffs, FDA decision dates and press-release events
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*PharmaObservatory::CompaniesApi* | [**companies_clia_certificates**](docs/CompaniesApi.md#companies_clia_certificates) | **GET** /api/v1/companies/{id}/clia_certificates | CLIA laboratory certificates
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*PharmaObservatory::CompaniesApi* | [**companies_company_assets**](docs/CompaniesApi.md#companies_company_assets) | **GET** /api/v1/companies/{id}/company_assets | Company assets (approved and marketed drugs)
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*PharmaObservatory::CompaniesApi* | [**companies_company_biomarker_capability**](docs/CompaniesApi.md#companies_company_biomarker_capability) | **GET** /api/v1/companies/{id}/company_biomarker_capability | Company biomarker capability
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*PharmaObservatory::CompaniesApi* | [**companies_company_funding_events**](docs/CompaniesApi.md#companies_company_funding_events) | **GET** /api/v1/companies/{id}/company_funding_events | Company funding events
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*PharmaObservatory::CompaniesApi* | [**companies_company_funding_summary**](docs/CompaniesApi.md#companies_company_funding_summary) | **GET** /api/v1/companies/{id}/company_funding_summary | Company funding summary
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*PharmaObservatory::CompaniesApi* | [**companies_company_members**](docs/CompaniesApi.md#companies_company_members) | **GET** /api/v1/companies/{id}/company_members | Company members
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*PharmaObservatory::CompaniesApi* | [**companies_company_programs**](docs/CompaniesApi.md#companies_company_programs) | **GET** /api/v1/companies/{id}/company_programs | Company programs
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*PharmaObservatory::CompaniesApi* | [**companies_company_rare_disease_declarations**](docs/CompaniesApi.md#companies_company_rare_disease_declarations) | **GET** /api/v1/companies/{id}/company_rare_disease_declarations | Organization-wide rare disease declarations
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*PharmaObservatory::CompaniesApi* | [**companies_company_targets**](docs/CompaniesApi.md#companies_company_targets) | **GET** /api/v1/companies/{id}/company_targets | Targets a company pursues
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*PharmaObservatory::CompaniesApi* | [**companies_company_trial_geography**](docs/CompaniesApi.md#companies_company_trial_geography) | **GET** /api/v1/companies/{id}/company_trial_geography | Company trial geography
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*PharmaObservatory::CompaniesApi* | [**companies_company_trial_sites**](docs/CompaniesApi.md#companies_company_trial_sites) | **GET** /api/v1/companies/{id}/company_trial_sites | Company trial sites
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*PharmaObservatory::CompaniesApi* | [**companies_institutional_holdings**](docs/CompaniesApi.md#companies_institutional_holdings) | **GET** /api/v1/companies/{id}/institutional_holdings | Institutional holdings (SEC Form 13F)
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*PharmaObservatory::CompaniesApi* | [**companies_institutional_quarter_totals**](docs/CompaniesApi.md#companies_institutional_quarter_totals) | **GET** /api/v1/companies/{id}/institutional_quarter_totals | Institutional quarter totals (SEC Form 13F)
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*PharmaObservatory::CompaniesApi* | [**companies_legal_entities**](docs/CompaniesApi.md#companies_legal_entities) | **GET** /api/v1/companies/{id}/legal_entities | Legal entities
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*PharmaObservatory::CompaniesApi* | [**companies_legal_entity_sec_filings**](docs/CompaniesApi.md#companies_legal_entity_sec_filings) | **GET** /api/v1/companies/{id}/legal_entity_sec_filings | SEC filer records
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*PharmaObservatory::CompaniesApi* | [**companies_list**](docs/CompaniesApi.md#companies_list) | **GET** /api/v1/companies | List companies
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*PharmaObservatory::CompaniesApi* | [**companies_org_disclosure_trend**](docs/CompaniesApi.md#companies_org_disclosure_trend) | **GET** /api/v1/companies/{id}/org_disclosure_trend | Organization disclosure trend
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*PharmaObservatory::CompaniesApi* | [**companies_org_disclosures**](docs/CompaniesApi.md#companies_org_disclosures) | **GET** /api/v1/companies/{id}/org_disclosures | Organization disclosures (climate and diversity)
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*PharmaObservatory::CompaniesApi* | [**companies_org_relationships**](docs/CompaniesApi.md#companies_org_relationships) | **GET** /api/v1/companies/{id}/org_relationships | Organization relationships
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*PharmaObservatory::CompaniesApi* | [**companies_ownership_percentages**](docs/CompaniesApi.md#companies_ownership_percentages) | **GET** /api/v1/companies/{id}/ownership_percentages | Ownership percentages
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*PharmaObservatory::CompaniesApi* | [**companies_ownership_positions**](docs/CompaniesApi.md#companies_ownership_positions) | **GET** /api/v1/companies/{id}/ownership_positions | Ownership and control positions
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*PharmaObservatory::CompaniesApi* | [**companies_ownership_source_coverage**](docs/CompaniesApi.md#companies_ownership_source_coverage) | **GET** /api/v1/companies/{id}/ownership_source_coverage | Ownership source coverage
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*PharmaObservatory::CompaniesApi* | [**companies_pdufa_dates**](docs/CompaniesApi.md#companies_pdufa_dates) | **GET** /api/v1/companies/{id}/pdufa_dates | FDA decision dates (PDUFA) and catalysts
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*PharmaObservatory::CompaniesApi* | [**companies_program_licensing_candidates**](docs/CompaniesApi.md#companies_program_licensing_candidates) | **GET** /api/v1/companies/{id}/program_licensing_candidates | Program licensing candidates
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*PharmaObservatory::CompaniesApi* | [**companies_recalls**](docs/CompaniesApi.md#companies_recalls) | **GET** /api/v1/companies/{id}/recalls | FDA recalls
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*PharmaObservatory::CompaniesApi* | [**companies_sbti_crosscheck**](docs/CompaniesApi.md#companies_sbti_crosscheck) | **GET** /api/v1/companies/{id}/sbti_crosscheck | SBTi cross-check
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*PharmaObservatory::CompaniesApi* | [**companies_sec_pdufa_dates**](docs/CompaniesApi.md#companies_sec_pdufa_dates) | **GET** /api/v1/companies/{id}/sec_pdufa_dates | FDA dates disclosed in SEC filings
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*PharmaObservatory::CompaniesApi* | [**companies_sponsor_delivery**](docs/CompaniesApi.md#companies_sponsor_delivery) | **GET** /api/v1/companies/{id}/sponsor_delivery | Sponsor delivery reliability
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*PharmaObservatory::CompaniesApi* | [**companies_sponsor_patent_mentions**](docs/CompaniesApi.md#companies_sponsor_patent_mentions) | **GET** /api/v1/companies/{id}/sponsor_patent_mentions | Sponsor patent mentions
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*PharmaObservatory::CompaniesApi* | [**companies_sponsor_recruitment_by_phase**](docs/CompaniesApi.md#companies_sponsor_recruitment_by_phase) | **GET** /api/v1/companies/{id}/sponsor_recruitment_by_phase | Trial recruitment duration by sponsor and phase
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*PharmaObservatory::CompaniesApi* | [**companies_sponsor_recruitment_duration**](docs/CompaniesApi.md#companies_sponsor_recruitment_duration) | **GET** /api/v1/companies/{id}/sponsor_recruitment_duration | Trial recruitment duration by sponsor
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*PharmaObservatory::CompaniesApi* | [**companies_sponsor_trial_conditions**](docs/CompaniesApi.md#companies_sponsor_trial_conditions) | **GET** /api/v1/companies/{id}/sponsor_trial_conditions | Sponsor trial conditions
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*PharmaObservatory::CompaniesApi* | [**companies_sponsor_trial_drugs**](docs/CompaniesApi.md#companies_sponsor_trial_drugs) | **GET** /api/v1/companies/{id}/sponsor_trial_drugs | Sponsor trial drugs
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*PharmaObservatory::CompaniesApi* | [**companies_sponsor_trial_start_forecast**](docs/CompaniesApi.md#companies_sponsor_trial_start_forecast) | **GET** /api/v1/companies/{id}/sponsor_trial_start_forecast | Trial-start forecast by sponsor
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*PharmaObservatory::CompaniesApi* | [**companies_sponsor_trials**](docs/CompaniesApi.md#companies_sponsor_trials) | **GET** /api/v1/companies/{id}/sponsor_trials | Sponsor trials
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*PharmaObservatory::CompaniesApi* | [**companies_supplier_capability_esg**](docs/CompaniesApi.md#companies_supplier_capability_esg) | **GET** /api/v1/companies/{id}/supplier_capability_esg | Supplier capability and ESG disclosure
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_catalysts**](docs/LegalEntitiesApi.md#legal_entities_catalysts) | **GET** /api/v1/legal_entities/{id}/catalysts | Catalysts: trial readouts, patent cliffs, FDA decision dates and press-release events
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_clia_certificates**](docs/LegalEntitiesApi.md#legal_entities_clia_certificates) | **GET** /api/v1/legal_entities/{id}/clia_certificates | CLIA laboratory certificates
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_company_assets**](docs/LegalEntitiesApi.md#legal_entities_company_assets) | **GET** /api/v1/legal_entities/{id}/company_assets | Company assets (approved and marketed drugs)
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_company_biomarker_capability**](docs/LegalEntitiesApi.md#legal_entities_company_biomarker_capability) | **GET** /api/v1/legal_entities/{id}/company_biomarker_capability | Company biomarker capability
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_company_programs**](docs/LegalEntitiesApi.md#legal_entities_company_programs) | **GET** /api/v1/legal_entities/{id}/company_programs | Company programs
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_company_rare_disease_declarations**](docs/LegalEntitiesApi.md#legal_entities_company_rare_disease_declarations) | **GET** /api/v1/legal_entities/{id}/company_rare_disease_declarations | Organization-wide rare disease declarations
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_debarments**](docs/LegalEntitiesApi.md#legal_entities_debarments) | **GET** /api/v1/legal_entities/{id}/debarments | FDA firm debarments
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_drug_patent_cliff**](docs/LegalEntitiesApi.md#legal_entities_drug_patent_cliff) | **GET** /api/v1/legal_entities/{id}/drug_patent_cliff | Patent-cliff exposure
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_enforcement_events**](docs/LegalEntitiesApi.md#legal_entities_enforcement_events) | **GET** /api/v1/legal_entities/{id}/enforcement_events | FDA enforcement events
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_inspections**](docs/LegalEntitiesApi.md#legal_entities_inspections) | **GET** /api/v1/legal_entities/{id}/inspections | FDA inspections
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_institutional_holdings**](docs/LegalEntitiesApi.md#legal_entities_institutional_holdings) | **GET** /api/v1/legal_entities/{id}/institutional_holdings | Institutional holdings (SEC Form 13F)
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_institutional_quarter_totals**](docs/LegalEntitiesApi.md#legal_entities_institutional_quarter_totals) | **GET** /api/v1/legal_entities/{id}/institutional_quarter_totals | Institutional quarter totals (SEC Form 13F)
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_legal_entity_sec_filings**](docs/LegalEntitiesApi.md#legal_entities_legal_entity_sec_filings) | **GET** /api/v1/legal_entities/{id}/legal_entity_sec_filings | SEC filer records
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_list**](docs/LegalEntitiesApi.md#legal_entities_list) | **GET** /api/v1/legal_entities | List legal entities
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_org_disclosure_trend**](docs/LegalEntitiesApi.md#legal_entities_org_disclosure_trend) | **GET** /api/v1/legal_entities/{id}/org_disclosure_trend | Organization disclosure trend
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_org_disclosures**](docs/LegalEntitiesApi.md#legal_entities_org_disclosures) | **GET** /api/v1/legal_entities/{id}/org_disclosures | Organization disclosures (climate and diversity)
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_org_relationships**](docs/LegalEntitiesApi.md#legal_entities_org_relationships) | **GET** /api/v1/legal_entities/{id}/org_relationships | Organization relationships
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_ownership_percentages**](docs/LegalEntitiesApi.md#legal_entities_ownership_percentages) | **GET** /api/v1/legal_entities/{id}/ownership_percentages | Ownership percentages
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_ownership_positions**](docs/LegalEntitiesApi.md#legal_entities_ownership_positions) | **GET** /api/v1/legal_entities/{id}/ownership_positions | Ownership and control positions
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_ownership_source_coverage**](docs/LegalEntitiesApi.md#legal_entities_ownership_source_coverage) | **GET** /api/v1/legal_entities/{id}/ownership_source_coverage | Ownership source coverage
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_pdufa_dates**](docs/LegalEntitiesApi.md#legal_entities_pdufa_dates) | **GET** /api/v1/legal_entities/{id}/pdufa_dates | FDA decision dates (PDUFA) and catalysts
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_program_licensing_candidates**](docs/LegalEntitiesApi.md#legal_entities_program_licensing_candidates) | **GET** /api/v1/legal_entities/{id}/program_licensing_candidates | Program licensing candidates
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_recalls**](docs/LegalEntitiesApi.md#legal_entities_recalls) | **GET** /api/v1/legal_entities/{id}/recalls | FDA recalls
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_sbti_crosscheck**](docs/LegalEntitiesApi.md#legal_entities_sbti_crosscheck) | **GET** /api/v1/legal_entities/{id}/sbti_crosscheck | SBTi cross-check
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_sec_pdufa_dates**](docs/LegalEntitiesApi.md#legal_entities_sec_pdufa_dates) | **GET** /api/v1/legal_entities/{id}/sec_pdufa_dates | FDA dates disclosed in SEC filings
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_sponsor_delivery**](docs/LegalEntitiesApi.md#legal_entities_sponsor_delivery) | **GET** /api/v1/legal_entities/{id}/sponsor_delivery | Sponsor delivery reliability
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_sponsor_patent_mentions**](docs/LegalEntitiesApi.md#legal_entities_sponsor_patent_mentions) | **GET** /api/v1/legal_entities/{id}/sponsor_patent_mentions | Sponsor patent mentions
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_sponsor_recruitment_by_phase**](docs/LegalEntitiesApi.md#legal_entities_sponsor_recruitment_by_phase) | **GET** /api/v1/legal_entities/{id}/sponsor_recruitment_by_phase | Trial recruitment duration by sponsor and phase
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_sponsor_recruitment_duration**](docs/LegalEntitiesApi.md#legal_entities_sponsor_recruitment_duration) | **GET** /api/v1/legal_entities/{id}/sponsor_recruitment_duration | Trial recruitment duration by sponsor
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_sponsor_trial_conditions**](docs/LegalEntitiesApi.md#legal_entities_sponsor_trial_conditions) | **GET** /api/v1/legal_entities/{id}/sponsor_trial_conditions | Sponsor trial conditions
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_sponsor_trial_drugs**](docs/LegalEntitiesApi.md#legal_entities_sponsor_trial_drugs) | **GET** /api/v1/legal_entities/{id}/sponsor_trial_drugs | Sponsor trial drugs
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_sponsor_trial_start_forecast**](docs/LegalEntitiesApi.md#legal_entities_sponsor_trial_start_forecast) | **GET** /api/v1/legal_entities/{id}/sponsor_trial_start_forecast | Trial-start forecast by sponsor
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_sponsor_trials**](docs/LegalEntitiesApi.md#legal_entities_sponsor_trials) | **GET** /api/v1/legal_entities/{id}/sponsor_trials | Sponsor trials
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*PharmaObservatory::LegalEntitiesApi* | [**legal_entities_supplier_capability_esg**](docs/LegalEntitiesApi.md#legal_entities_supplier_capability_esg) | **GET** /api/v1/legal_entities/{id}/supplier_capability_esg | Supplier capability and ESG disclosure
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*PharmaObservatory::RareDiseasesApi* | [**rare_diseases_rare_disease_trial_coverage**](docs/RareDiseasesApi.md#rare_diseases_rare_disease_trial_coverage) | **GET** /api/v1/rare_diseases/{id}/rare_disease_trial_coverage | Rare disease trial coverage
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*PharmaObservatory::RareDiseasesApi* | [**rare_diseases_rare_disease_trial_sites**](docs/RareDiseasesApi.md#rare_diseases_rare_disease_trial_sites) | **GET** /api/v1/rare_diseases/{id}/rare_disease_trial_sites | Rare disease trial sites
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*PharmaObservatory::RareDiseasesApi* | [**rare_diseases_rare_disease_trials**](docs/RareDiseasesApi.md#rare_diseases_rare_disease_trials) | **GET** /api/v1/rare_diseases/{id}/rare_disease_trials | Rare disease trials
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*PharmaObservatory::RwdConductorsApi* | [**rwd_conductors_get**](docs/RwdConductorsApi.md#rwd_conductors_get) | **GET** /api/v1/rwd_conductors/{id} | One real-world data study conductor
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*PharmaObservatory::RwdConductorsApi* | [**rwd_conductors_list**](docs/RwdConductorsApi.md#rwd_conductors_list) | **GET** /api/v1/rwd_conductors | List real-world data study conductors
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*PharmaObservatory::RwdConductorsApi* | [**rwd_conductors_rwd_conductor_delivery**](docs/RwdConductorsApi.md#rwd_conductors_rwd_conductor_delivery) | **GET** /api/v1/rwd_conductors/{id}/rwd_conductor_delivery | Real-world data study conductor delivery by mandate (HMA-EMA catalogue)
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*PharmaObservatory::RwdConductorsApi* | [**rwd_conductors_rwd_conductor_footprint**](docs/RwdConductorsApi.md#rwd_conductors_rwd_conductor_footprint) | **GET** /api/v1/rwd_conductors/{id}/rwd_conductor_footprint | Real-world data study conductor footprint (HMA-EMA catalogue)
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*PharmaObservatory::RwdConductorsApi* | [**rwd_conductors_rwd_conductor_studies**](docs/RwdConductorsApi.md#rwd_conductors_rwd_conductor_studies) | **GET** /api/v1/rwd_conductors/{id}/rwd_conductor_studies | Real-world data study conductor studies (HMA-EMA catalogue)
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*PharmaObservatory::RwdInstitutionsApi* | [**rwd_institutions_get**](docs/RwdInstitutionsApi.md#rwd_institutions_get) | **GET** /api/v1/rwd_institutions/{id} | One real-world data register institution
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*PharmaObservatory::RwdInstitutionsApi* | [**rwd_institutions_list**](docs/RwdInstitutionsApi.md#rwd_institutions_list) | **GET** /api/v1/rwd_institutions | List real-world data register institutions
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*PharmaObservatory::RwdNetworksApi* | [**rwd_networks_get**](docs/RwdNetworksApi.md#rwd_networks_get) | **GET** /api/v1/rwd_networks/{id} | One real-world data register network
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*PharmaObservatory::RwdNetworksApi* | [**rwd_networks_list**](docs/RwdNetworksApi.md#rwd_networks_list) | **GET** /api/v1/rwd_networks | List real-world data register networks
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*PharmaObservatory::RwdRegistersApi* | [**rwd_registers_get**](docs/RwdRegistersApi.md#rwd_registers_get) | **GET** /api/v1/rwd_registers/{id} | One real-world data register
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*PharmaObservatory::RwdRegistersApi* | [**rwd_registers_list**](docs/RwdRegistersApi.md#rwd_registers_list) | **GET** /api/v1/rwd_registers | List real-world data registers
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*PharmaObservatory::RwdRegistersApi* | [**rwd_registers_rwd_coverage**](docs/RwdRegistersApi.md#rwd_registers_rwd_coverage) | **GET** /api/v1/rwd_registers/{id}/rwd_coverage | HMA-EMA catalogue denominator chains
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*PharmaObservatory::RwdSourcesApi* | [**rwd_sources_rwd_study_data_sources**](docs/RwdSourcesApi.md#rwd_sources_rwd_study_data_sources) | **GET** /api/v1/rwd_sources/{id}/rwd_study_data_sources | Registered real-world data study data sources
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*PharmaObservatory::RwdStudiesApi* | [**rwd_studies_get**](docs/RwdStudiesApi.md#rwd_studies_get) | **GET** /api/v1/rwd_studies/{id} | One real-world data study
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*PharmaObservatory::RwdStudiesApi* | [**rwd_studies_list**](docs/RwdStudiesApi.md#rwd_studies_list) | **GET** /api/v1/rwd_studies | List real-world data studies
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*PharmaObservatory::RwdStudiesApi* | [**rwd_studies_rwd_conductor_studies**](docs/RwdStudiesApi.md#rwd_studies_rwd_conductor_studies) | **GET** /api/v1/rwd_studies/{id}/rwd_conductor_studies | Real-world data study conductor studies (HMA-EMA catalogue)
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*PharmaObservatory::RwdStudiesApi* | [**rwd_studies_rwd_study_conditions**](docs/RwdStudiesApi.md#rwd_studies_rwd_study_conditions) | **GET** /api/v1/rwd_studies/{id}/rwd_study_conditions | Registered real-world data study conditions
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*PharmaObservatory::RwdStudiesApi* | [**rwd_studies_rwd_study_data_sources**](docs/RwdStudiesApi.md#rwd_studies_rwd_study_data_sources) | **GET** /api/v1/rwd_studies/{id}/rwd_study_data_sources | Registered real-world data study data sources
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*PharmaObservatory::RwdStudiesApi* | [**rwd_studies_rwd_study_drugs**](docs/RwdStudiesApi.md#rwd_studies_rwd_study_drugs) | **GET** /api/v1/rwd_studies/{id}/rwd_study_drugs | Registered real-world data study drugs
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- [PharmaObservatory::CompanyProgramsRow](docs/CompanyProgramsRow.md)
|
|
467
|
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- [PharmaObservatory::CompanyRareDiseaseDeclarationsResponse](docs/CompanyRareDiseaseDeclarationsResponse.md)
|
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- [PharmaObservatory::CompanyRareDiseaseDeclarationsRow](docs/CompanyRareDiseaseDeclarationsRow.md)
|
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- [PharmaObservatory::CompanyTargetsResponse](docs/CompanyTargetsResponse.md)
|
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- [PharmaObservatory::CompanyTargetsRow](docs/CompanyTargetsRow.md)
|
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- [PharmaObservatory::CompanyTrialGeographyResponse](docs/CompanyTrialGeographyResponse.md)
|
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|
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- [PharmaObservatory::LegalEntitiesRow](docs/LegalEntitiesRow.md)
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- [PharmaObservatory::LegalEntitySecFilingsResponse](docs/LegalEntitySecFilingsResponse.md)
|
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- [PharmaObservatory::LegalEntitySecFilingsRow](docs/LegalEntitySecFilingsRow.md)
|
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- [PharmaObservatory::ManagersRecord](docs/ManagersRecord.md)
|
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- [PharmaObservatory::ManagersResponse](docs/ManagersResponse.md)
|
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- [PharmaObservatory::ManagersRow](docs/ManagersRow.md)
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- [PharmaObservatory::OrgDisclosureTrendResponse](docs/OrgDisclosureTrendResponse.md)
|
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- [PharmaObservatory::OrgDisclosureTrendRow](docs/OrgDisclosureTrendRow.md)
|
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542
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- [PharmaObservatory::OrgDisclosuresResponse](docs/OrgDisclosuresResponse.md)
|
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- [PharmaObservatory::OrgDisclosuresRow](docs/OrgDisclosuresRow.md)
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- [PharmaObservatory::OrgRelationshipsResponse](docs/OrgRelationshipsResponse.md)
|
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@@ -547,6 +599,8 @@ Class | Method | HTTP request | Description
|
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- [PharmaObservatory::OwnershipPercentagesRow](docs/OwnershipPercentagesRow.md)
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- [PharmaObservatory::OwnershipPositionsResponse](docs/OwnershipPositionsResponse.md)
|
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- [PharmaObservatory::OwnershipPositionsRow](docs/OwnershipPositionsRow.md)
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- [PharmaObservatory::OwnershipSourceCoverageResponse](docs/OwnershipSourceCoverageResponse.md)
|
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- [PharmaObservatory::OwnershipSourceCoverageRow](docs/OwnershipSourceCoverageRow.md)
|
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550
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|
- [PharmaObservatory::PdufaDatesResponse](docs/PdufaDatesResponse.md)
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- [PharmaObservatory::PdufaDatesRow](docs/PdufaDatesRow.md)
|
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- [PharmaObservatory::ProgramLicensingCandidatesResponse](docs/ProgramLicensingCandidatesResponse.md)
|
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@@ -594,8 +648,23 @@ Class | Method | HTTP request | Description
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- [PharmaObservatory::RecallsResponse](docs/RecallsResponse.md)
|
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- [PharmaObservatory::RecallsRow](docs/RecallsRow.md)
|
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- [PharmaObservatory::ResultPage](docs/ResultPage.md)
|
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- [PharmaObservatory::RwdConductorDeliveryResponse](docs/RwdConductorDeliveryResponse.md)
|
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652
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- [PharmaObservatory::RwdConductorDeliveryRow](docs/RwdConductorDeliveryRow.md)
|
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653
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- [PharmaObservatory::RwdConductorFootprintResponse](docs/RwdConductorFootprintResponse.md)
|
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654
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- [PharmaObservatory::RwdConductorFootprintRow](docs/RwdConductorFootprintRow.md)
|
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655
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- [PharmaObservatory::RwdConductorStudiesResponse](docs/RwdConductorStudiesResponse.md)
|
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656
|
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- [PharmaObservatory::RwdConductorStudiesRow](docs/RwdConductorStudiesRow.md)
|
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|
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- [PharmaObservatory::RwdConductorsRecord](docs/RwdConductorsRecord.md)
|
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|
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- [PharmaObservatory::RwdConductorsResponse](docs/RwdConductorsResponse.md)
|
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|
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- [PharmaObservatory::RwdConductorsRow](docs/RwdConductorsRow.md)
|
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|
- [PharmaObservatory::RwdCoverageResponse](docs/RwdCoverageResponse.md)
|
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|
- [PharmaObservatory::RwdCoverageRow](docs/RwdCoverageRow.md)
|
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|
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- [PharmaObservatory::RwdInstitutionsRecord](docs/RwdInstitutionsRecord.md)
|
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- [PharmaObservatory::RwdInstitutionsResponse](docs/RwdInstitutionsResponse.md)
|
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- [PharmaObservatory::RwdInstitutionsRow](docs/RwdInstitutionsRow.md)
|
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- [PharmaObservatory::RwdNetworksRecord](docs/RwdNetworksRecord.md)
|
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- [PharmaObservatory::RwdNetworksResponse](docs/RwdNetworksResponse.md)
|
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|
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- [PharmaObservatory::RwdNetworksRow](docs/RwdNetworksRow.md)
|
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|
- [PharmaObservatory::RwdRegisterProvenanceResponse](docs/RwdRegisterProvenanceResponse.md)
|
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- [PharmaObservatory::RwdRegisterProvenanceRow](docs/RwdRegisterProvenanceRow.md)
|
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- [PharmaObservatory::RwdRegistersRecord](docs/RwdRegistersRecord.md)
|
|
@@ -627,6 +696,8 @@ Class | Method | HTTP request | Description
|
|
|
627
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|
- [PharmaObservatory::RwdStudyMilestonesRow](docs/RwdStudyMilestonesRow.md)
|
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|
- [PharmaObservatory::RwdWithheldFieldsResponse](docs/RwdWithheldFieldsResponse.md)
|
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|
- [PharmaObservatory::RwdWithheldFieldsRow](docs/RwdWithheldFieldsRow.md)
|
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699
|
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- [PharmaObservatory::SbtiCrosscheckResponse](docs/SbtiCrosscheckResponse.md)
|
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|
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- [PharmaObservatory::SbtiCrosscheckRow](docs/SbtiCrosscheckRow.md)
|
|
630
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|
- [PharmaObservatory::SecPdufaDatesResponse](docs/SecPdufaDatesResponse.md)
|
|
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|
- [PharmaObservatory::SecPdufaDatesRow](docs/SecPdufaDatesRow.md)
|
|
632
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|
- [PharmaObservatory::SiteBedsYearlyResponse](docs/SiteBedsYearlyResponse.md)
|
|
@@ -647,10 +718,18 @@ Class | Method | HTTP request | Description
|
|
|
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|
- [PharmaObservatory::SitesRecordAttributes](docs/SitesRecordAttributes.md)
|
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- [PharmaObservatory::SitesResponse](docs/SitesResponse.md)
|
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|
- [PharmaObservatory::SitesRow](docs/SitesRow.md)
|
|
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|
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- [PharmaObservatory::SponsorDeliveryResponse](docs/SponsorDeliveryResponse.md)
|
|
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|
+
- [PharmaObservatory::SponsorDeliveryRow](docs/SponsorDeliveryRow.md)
|
|
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|
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- [PharmaObservatory::SponsorPatentMentionsResponse](docs/SponsorPatentMentionsResponse.md)
|
|
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|
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- [PharmaObservatory::SponsorPatentMentionsRow](docs/SponsorPatentMentionsRow.md)
|
|
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|
- [PharmaObservatory::SponsorRecruitmentByPhaseResponse](docs/SponsorRecruitmentByPhaseResponse.md)
|
|
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|
- [PharmaObservatory::SponsorRecruitmentByPhaseRow](docs/SponsorRecruitmentByPhaseRow.md)
|
|
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|
- [PharmaObservatory::SponsorRecruitmentDurationResponse](docs/SponsorRecruitmentDurationResponse.md)
|
|
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|
- [PharmaObservatory::SponsorRecruitmentDurationRow](docs/SponsorRecruitmentDurationRow.md)
|
|
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|
+
- [PharmaObservatory::SponsorTrialConditionsResponse](docs/SponsorTrialConditionsResponse.md)
|
|
730
|
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- [PharmaObservatory::SponsorTrialConditionsRow](docs/SponsorTrialConditionsRow.md)
|
|
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|
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- [PharmaObservatory::SponsorTrialDrugsResponse](docs/SponsorTrialDrugsResponse.md)
|
|
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|
+
- [PharmaObservatory::SponsorTrialDrugsRow](docs/SponsorTrialDrugsRow.md)
|
|
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|
- [PharmaObservatory::SponsorTrialStartForecastResponse](docs/SponsorTrialStartForecastResponse.md)
|
|
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|
- [PharmaObservatory::SponsorTrialStartForecastRow](docs/SponsorTrialStartForecastRow.md)
|
|
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|
- [PharmaObservatory::SponsorTrialsResponse](docs/SponsorTrialsResponse.md)
|
|
@@ -0,0 +1,58 @@
|
|
|
1
|
+
# PharmaObservatory::BiomarkerAlleleFrequenciesResponse
|
|
2
|
+
|
|
3
|
+
## Properties
|
|
4
|
+
|
|
5
|
+
| Name | Type | Description | Notes |
|
|
6
|
+
| ---- | ---- | ----------- | ----- |
|
|
7
|
+
| **dataset** | **String** | | |
|
|
8
|
+
| **grain** | **String** | | [optional] |
|
|
9
|
+
| **object_type** | **String** | | [optional] |
|
|
10
|
+
| **id** | **String** | | [optional] |
|
|
11
|
+
| **scope** | [**BiomarkerAssayEvidenceResponseScope**](BiomarkerAssayEvidenceResponseScope.md) | | [optional] |
|
|
12
|
+
| **columns** | [**Array<DatasetColumn>**](DatasetColumn.md) | | |
|
|
13
|
+
| **rows** | [**Array<BiomarkerAlleleFrequenciesRow>**](BiomarkerAlleleFrequenciesRow.md) | | |
|
|
14
|
+
| **total** | **Integer** | The exact count of the filtered rows on an ungrouped read, carried by the cursor; null when grouped. | [optional] |
|
|
15
|
+
| **next_cursor** | **String** | | [optional] |
|
|
16
|
+
| **sort** | **Array<String>** | | [optional] |
|
|
17
|
+
| **filters** | **Array<Hash<String, Object>>** | | [optional] |
|
|
18
|
+
| **group_by** | **Array<String>** | | [optional] |
|
|
19
|
+
| **measures** | **Array<String>** | | [optional] |
|
|
20
|
+
| **attribution** | [**Array<DatasetAttribution>**](DatasetAttribution.md) | | [optional] |
|
|
21
|
+
| **source_credit** | **String** | | [optional] |
|
|
22
|
+
| **withheld_tiers** | **Array<String>** | | [optional] |
|
|
23
|
+
| **withheld_columns** | **Array<String>** | | [optional] |
|
|
24
|
+
| **freshness** | [**BiomarkerAssayEvidenceResponseFreshness**](BiomarkerAssayEvidenceResponseFreshness.md) | | [optional] |
|
|
25
|
+
| **build** | [**BiomarkerAssayEvidenceResponseBuild**](BiomarkerAssayEvidenceResponseBuild.md) | | [optional] |
|
|
26
|
+
| **build_state** | [**DatasetBuildState**](DatasetBuildState.md) | | [optional] |
|
|
27
|
+
| **restriction** | **Hash<String, Object>** | | [optional] |
|
|
28
|
+
|
|
29
|
+
## Example
|
|
30
|
+
|
|
31
|
+
```ruby
|
|
32
|
+
require 'pharmaobservatory'
|
|
33
|
+
|
|
34
|
+
instance = PharmaObservatory::BiomarkerAlleleFrequenciesResponse.new(
|
|
35
|
+
dataset: null,
|
|
36
|
+
grain: null,
|
|
37
|
+
object_type: null,
|
|
38
|
+
id: null,
|
|
39
|
+
scope: null,
|
|
40
|
+
columns: null,
|
|
41
|
+
rows: null,
|
|
42
|
+
total: null,
|
|
43
|
+
next_cursor: null,
|
|
44
|
+
sort: null,
|
|
45
|
+
filters: null,
|
|
46
|
+
group_by: null,
|
|
47
|
+
measures: null,
|
|
48
|
+
attribution: null,
|
|
49
|
+
source_credit: null,
|
|
50
|
+
withheld_tiers: null,
|
|
51
|
+
withheld_columns: null,
|
|
52
|
+
freshness: null,
|
|
53
|
+
build: null,
|
|
54
|
+
build_state: null,
|
|
55
|
+
restriction: null
|
|
56
|
+
)
|
|
57
|
+
```
|
|
58
|
+
|
|
@@ -0,0 +1,62 @@
|
|
|
1
|
+
# PharmaObservatory::BiomarkerAlleleFrequenciesRow
|
|
2
|
+
|
|
3
|
+
## Properties
|
|
4
|
+
|
|
5
|
+
| Name | Type | Description | Notes |
|
|
6
|
+
| ---- | ---- | ----------- | ----- |
|
|
7
|
+
| **route_key** | **String** | The route key of the gene the variant belongs to, the entry key for the biomarkers object type. | [optional] |
|
|
8
|
+
| **gene_symbol** | **String** | The gene symbol. | [optional] |
|
|
9
|
+
| **variant_route_key** | **String** | The variant's own route key (the id its web page uses). | [optional] |
|
|
10
|
+
| **variant_biomarker_id** | **String** | The variant's own biomarker key. | [optional] |
|
|
11
|
+
| **amino_acid_change** | **String** | The protein change, for example p.V600E. | [optional] |
|
|
12
|
+
| **biomarker_variant_coordinate_id** | **String** | The key of the DNA change (the coordinate path) the row describes. | [optional] |
|
|
13
|
+
| **snv_ordinal** | **Integer** | Which single-base DNA change of the protein change this is, from one; most changes have one. | [optional] |
|
|
14
|
+
| **is_ambiguous_path** | **Boolean** | Whether the protein change can be produced by more than one single-base DNA change, so this row is one candidate rather than the only one. | [optional] |
|
|
15
|
+
| **snv_path_count** | **Integer** | How many single-base DNA changes produce the protein change. | [optional] |
|
|
16
|
+
| **refseq_transcript_accession** | **String** | The reference transcript the protein change was mapped on (a RefSeq accession). | [optional] |
|
|
17
|
+
| **strand** | **String** | The strand of the gene on the genome, plus or minus. | [optional] |
|
|
18
|
+
| **queried_contig** | **String** | The chromosome as gnomAD spells it. | [optional] |
|
|
19
|
+
| **queried_position** | **Integer** | The genomic position looked up in gnomAD (GRCh38). | [optional] |
|
|
20
|
+
| **reference_allele** | **String** | The reference base on the genomic plus strand. | [optional] |
|
|
21
|
+
| **alternate_allele** | **String** | The alternate base on the genomic plus strand. | [optional] |
|
|
22
|
+
| **gnomad_release** | **String** | The gnomAD release the lookup used. | [optional] |
|
|
23
|
+
| **coverage_status** | **String** | What the lookup found. observed: the DNA change is in gnomAD. absent_from_gnomad: the position was queried and the change is not there. no_gnomad_release_for_contig: gnomAD has no file for the chromosome. query_failed: the lookup failed. | [optional] |
|
|
24
|
+
| **filter_status** | **String** | gnomAD's own quality filter for the site, verbatim (PASS or a semicolon list). Null unless observed. | [optional] |
|
|
25
|
+
| **population_code** | **String** | The population. overall is the unstratified total; the others are gnomAD genetic ancestry groups: afr African/African American, amr Admixed American, asj Ashkenazi Jewish, eas East Asian, fin Finnish, mid Middle Eastern, nfe Non-Finnish European, remaining the remaining individuals, sas South Asian. | [optional] |
|
|
26
|
+
| **allele_count** | **Integer** | Alternate alleles observed in the population. Null unless observed. | [optional] |
|
|
27
|
+
| **allele_number** | **Integer** | Alleles called in the population, the denominator of allele_frequency. Null unless observed. | [optional] |
|
|
28
|
+
| **allele_frequency** | **Float** | The share of called alleles that are the alternate allele (allele_count over allele_number), as a fraction from zero to one. Null unless observed. | [optional] |
|
|
29
|
+
| **homozygote_count** | **Integer** | People homozygous for the alternate allele. Null unless observed. | [optional] |
|
|
30
|
+
|
|
31
|
+
## Example
|
|
32
|
+
|
|
33
|
+
```ruby
|
|
34
|
+
require 'pharmaobservatory'
|
|
35
|
+
|
|
36
|
+
instance = PharmaObservatory::BiomarkerAlleleFrequenciesRow.new(
|
|
37
|
+
route_key: null,
|
|
38
|
+
gene_symbol: null,
|
|
39
|
+
variant_route_key: null,
|
|
40
|
+
variant_biomarker_id: null,
|
|
41
|
+
amino_acid_change: null,
|
|
42
|
+
biomarker_variant_coordinate_id: null,
|
|
43
|
+
snv_ordinal: null,
|
|
44
|
+
is_ambiguous_path: null,
|
|
45
|
+
snv_path_count: null,
|
|
46
|
+
refseq_transcript_accession: null,
|
|
47
|
+
strand: null,
|
|
48
|
+
queried_contig: null,
|
|
49
|
+
queried_position: null,
|
|
50
|
+
reference_allele: null,
|
|
51
|
+
alternate_allele: null,
|
|
52
|
+
gnomad_release: null,
|
|
53
|
+
coverage_status: null,
|
|
54
|
+
filter_status: null,
|
|
55
|
+
population_code: null,
|
|
56
|
+
allele_count: null,
|
|
57
|
+
allele_number: null,
|
|
58
|
+
allele_frequency: null,
|
|
59
|
+
homozygote_count: null
|
|
60
|
+
)
|
|
61
|
+
```
|
|
62
|
+
|
|
@@ -0,0 +1,58 @@
|
|
|
1
|
+
# PharmaObservatory::BiomarkerAssayProvidersResponse
|
|
2
|
+
|
|
3
|
+
## Properties
|
|
4
|
+
|
|
5
|
+
| Name | Type | Description | Notes |
|
|
6
|
+
| ---- | ---- | ----------- | ----- |
|
|
7
|
+
| **dataset** | **String** | | |
|
|
8
|
+
| **grain** | **String** | | [optional] |
|
|
9
|
+
| **object_type** | **String** | | [optional] |
|
|
10
|
+
| **id** | **String** | | [optional] |
|
|
11
|
+
| **scope** | [**BiomarkerAssayEvidenceResponseScope**](BiomarkerAssayEvidenceResponseScope.md) | | [optional] |
|
|
12
|
+
| **columns** | [**Array<DatasetColumn>**](DatasetColumn.md) | | |
|
|
13
|
+
| **rows** | [**Array<BiomarkerAssayProvidersRow>**](BiomarkerAssayProvidersRow.md) | | |
|
|
14
|
+
| **total** | **Integer** | The exact count of the filtered rows on an ungrouped read, carried by the cursor; null when grouped. | [optional] |
|
|
15
|
+
| **next_cursor** | **String** | | [optional] |
|
|
16
|
+
| **sort** | **Array<String>** | | [optional] |
|
|
17
|
+
| **filters** | **Array<Hash<String, Object>>** | | [optional] |
|
|
18
|
+
| **group_by** | **Array<String>** | | [optional] |
|
|
19
|
+
| **measures** | **Array<String>** | | [optional] |
|
|
20
|
+
| **attribution** | [**Array<DatasetAttribution>**](DatasetAttribution.md) | | [optional] |
|
|
21
|
+
| **source_credit** | **String** | | [optional] |
|
|
22
|
+
| **withheld_tiers** | **Array<String>** | | [optional] |
|
|
23
|
+
| **withheld_columns** | **Array<String>** | | [optional] |
|
|
24
|
+
| **freshness** | [**BiomarkerAssayEvidenceResponseFreshness**](BiomarkerAssayEvidenceResponseFreshness.md) | | [optional] |
|
|
25
|
+
| **build** | [**BiomarkerAssayEvidenceResponseBuild**](BiomarkerAssayEvidenceResponseBuild.md) | | [optional] |
|
|
26
|
+
| **build_state** | [**DatasetBuildState**](DatasetBuildState.md) | | [optional] |
|
|
27
|
+
| **restriction** | **Hash<String, Object>** | | [optional] |
|
|
28
|
+
|
|
29
|
+
## Example
|
|
30
|
+
|
|
31
|
+
```ruby
|
|
32
|
+
require 'pharmaobservatory'
|
|
33
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instance = PharmaObservatory::BiomarkerAssayProvidersResponse.new(
|
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dataset: null,
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grain: null,
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object_type: null,
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id: null,
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scope: null,
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columns: null,
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rows: null,
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total: null,
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next_cursor: null,
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sort: null,
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filters: null,
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group_by: null,
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measures: null,
|
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+
attribution: null,
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source_credit: null,
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+
withheld_tiers: null,
|
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withheld_columns: null,
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freshness: null,
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build: null,
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+
build_state: null,
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restriction: null
|
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+
)
|
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+
```
|
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+
|
|
@@ -0,0 +1,72 @@
|
|
|
1
|
+
# PharmaObservatory::BiomarkerAssayProvidersRow
|
|
2
|
+
|
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3
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+
## Properties
|
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4
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+
|
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5
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| Name | Type | Description | Notes |
|
|
6
|
+
| ---- | ---- | ----------- | ----- |
|
|
7
|
+
| **route_key** | **String** | The route key of the gene the biomarker resolved to, the entry key for the biomarkers object type. Null when the extraction did not resolve a gene. | [optional] |
|
|
8
|
+
| **biomarker_key** | **String** | The grouping key of the biomarker. The biomarker's key when its gene resolved, otherwise raw: followed by the lower-cased name as written, so two spellings of one unresolved biomarker are two keys. | [optional] |
|
|
9
|
+
| **biomarker_id** | **String** | The biomarker's own key; null for a pair whose gene did not resolve. | [optional] |
|
|
10
|
+
| **biomarker_display_name** | **String** | The biomarker's name, as resolved or else as extracted. | [optional] |
|
|
11
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+
| **gene_resolution_status** | **String** | resolved: the gene resolved. unresolved: a gene symbol was extracted and matched nothing. not_applicable: no gene symbol was extracted. | [optional] |
|
|
12
|
+
| **company_name_key** | **String** | The normalised company name the provider rows are grouped on. | [optional] |
|
|
13
|
+
| **provider_name** | **String** | The provider company name as it appears in the papers. | [optional] |
|
|
14
|
+
| **provider_org_id** | **String** | The provider's legal entity key, where the marketplace match resolves one. | [optional] |
|
|
15
|
+
| **provider_company_id** | **String** | The provider's company key. | [optional] |
|
|
16
|
+
| **provider_company_name** | **String** | The provider's company name. | [optional] |
|
|
17
|
+
| **provider_group_id** | **String** | The provider's current ultimate parent group key. | [optional] |
|
|
18
|
+
| **provider_group_name** | **String** | The provider's group name. | [optional] |
|
|
19
|
+
| **rx_matched** | **Boolean** | Whether the provider name matches a supplier in the Scientist.com marketplace. | [optional] |
|
|
20
|
+
| **rx_provider_id** | **String** | The matched marketplace supplier's id; join to the suppliers dataset. | [optional] |
|
|
21
|
+
| **rx_provider_name** | **String** | The matched marketplace supplier's name. | [optional] |
|
|
22
|
+
| **rx_provider_slug** | **String** | The matched supplier's marketplace profile slug. | [optional] |
|
|
23
|
+
| **has_clinical_validation** | **Boolean** | Whether any paper for the pair mentions clinical validation of the assay. | [optional] |
|
|
24
|
+
| **has_analytical_validation** | **Boolean** | Whether any paper for the pair mentions analytical validation of the assay. | [optional] |
|
|
25
|
+
| **n_papers** | **Integer** | Papers naming the biomarker and the provider, dated or not. | [optional] |
|
|
26
|
+
| **n_dated_papers** | **Integer** | Papers with a recoverable publication date. | [optional] |
|
|
27
|
+
| **n_undated_papers** | **Integer** | Papers with no recoverable publication date. n_dated_papers plus n_undated_papers is n_papers. | [optional] |
|
|
28
|
+
| **most_recent_published_at** | **Time** | The latest publication date among the dated papers, in UTC. Null when no paper is dated, which is not a statement that none was published recently. | [optional] |
|
|
29
|
+
| **most_recent_pmid** | **String** | The PubMed id of the most recent dated paper. | [optional] |
|
|
30
|
+
| **most_recent_title** | **String** | The title of that paper. | [optional] |
|
|
31
|
+
| **meets_curated_threshold** | **Boolean** | True when the provider matches a marketplace supplier or at least two papers name the pair. | [optional] |
|
|
32
|
+
| **assay_provider_class** | **String** | The company-level class. diagnostic_provider makes or supplies the diagnostic assay; reagent_supplier is the vendor whose kit appears in a methods section; context_dependent, pharma_or_other and not_a_company are the other decisions; unclassified means no decision yet. | [optional] |
|
|
33
|
+
| **assay_provider_class_source** | **String** | Where the class decision came from; null when unclassified. | [optional] |
|
|
34
|
+
| **assay_provider_class_decided_at** | **Time** | When the class was decided, in UTC; null when unclassified. | [optional] |
|
|
35
|
+
|
|
36
|
+
## Example
|
|
37
|
+
|
|
38
|
+
```ruby
|
|
39
|
+
require 'pharmaobservatory'
|
|
40
|
+
|
|
41
|
+
instance = PharmaObservatory::BiomarkerAssayProvidersRow.new(
|
|
42
|
+
route_key: null,
|
|
43
|
+
biomarker_key: null,
|
|
44
|
+
biomarker_id: null,
|
|
45
|
+
biomarker_display_name: null,
|
|
46
|
+
gene_resolution_status: null,
|
|
47
|
+
company_name_key: null,
|
|
48
|
+
provider_name: null,
|
|
49
|
+
provider_org_id: null,
|
|
50
|
+
provider_company_id: null,
|
|
51
|
+
provider_company_name: null,
|
|
52
|
+
provider_group_id: null,
|
|
53
|
+
provider_group_name: null,
|
|
54
|
+
rx_matched: null,
|
|
55
|
+
rx_provider_id: null,
|
|
56
|
+
rx_provider_name: null,
|
|
57
|
+
rx_provider_slug: null,
|
|
58
|
+
has_clinical_validation: null,
|
|
59
|
+
has_analytical_validation: null,
|
|
60
|
+
n_papers: null,
|
|
61
|
+
n_dated_papers: null,
|
|
62
|
+
n_undated_papers: null,
|
|
63
|
+
most_recent_published_at: null,
|
|
64
|
+
most_recent_pmid: null,
|
|
65
|
+
most_recent_title: null,
|
|
66
|
+
meets_curated_threshold: null,
|
|
67
|
+
assay_provider_class: null,
|
|
68
|
+
assay_provider_class_source: null,
|
|
69
|
+
assay_provider_class_decided_at: null
|
|
70
|
+
)
|
|
71
|
+
```
|
|
72
|
+
|
|
@@ -0,0 +1,58 @@
|
|
|
1
|
+
# PharmaObservatory::BiomarkerEvidenceByYearResponse
|
|
2
|
+
|
|
3
|
+
## Properties
|
|
4
|
+
|
|
5
|
+
| Name | Type | Description | Notes |
|
|
6
|
+
| ---- | ---- | ----------- | ----- |
|
|
7
|
+
| **dataset** | **String** | | |
|
|
8
|
+
| **grain** | **String** | | [optional] |
|
|
9
|
+
| **object_type** | **String** | | [optional] |
|
|
10
|
+
| **id** | **String** | | [optional] |
|
|
11
|
+
| **scope** | [**BiomarkerAssayEvidenceResponseScope**](BiomarkerAssayEvidenceResponseScope.md) | | [optional] |
|
|
12
|
+
| **columns** | [**Array<DatasetColumn>**](DatasetColumn.md) | | |
|
|
13
|
+
| **rows** | [**Array<BiomarkerEvidenceByYearRow>**](BiomarkerEvidenceByYearRow.md) | | |
|
|
14
|
+
| **total** | **Integer** | The exact count of the filtered rows on an ungrouped read, carried by the cursor; null when grouped. | [optional] |
|
|
15
|
+
| **next_cursor** | **String** | | [optional] |
|
|
16
|
+
| **sort** | **Array<String>** | | [optional] |
|
|
17
|
+
| **filters** | **Array<Hash<String, Object>>** | | [optional] |
|
|
18
|
+
| **group_by** | **Array<String>** | | [optional] |
|
|
19
|
+
| **measures** | **Array<String>** | | [optional] |
|
|
20
|
+
| **attribution** | [**Array<DatasetAttribution>**](DatasetAttribution.md) | | [optional] |
|
|
21
|
+
| **source_credit** | **String** | | [optional] |
|
|
22
|
+
| **withheld_tiers** | **Array<String>** | | [optional] |
|
|
23
|
+
| **withheld_columns** | **Array<String>** | | [optional] |
|
|
24
|
+
| **freshness** | [**BiomarkerAssayEvidenceResponseFreshness**](BiomarkerAssayEvidenceResponseFreshness.md) | | [optional] |
|
|
25
|
+
| **build** | [**BiomarkerAssayEvidenceResponseBuild**](BiomarkerAssayEvidenceResponseBuild.md) | | [optional] |
|
|
26
|
+
| **build_state** | [**DatasetBuildState**](DatasetBuildState.md) | | [optional] |
|
|
27
|
+
| **restriction** | **Hash<String, Object>** | | [optional] |
|
|
28
|
+
|
|
29
|
+
## Example
|
|
30
|
+
|
|
31
|
+
```ruby
|
|
32
|
+
require 'pharmaobservatory'
|
|
33
|
+
|
|
34
|
+
instance = PharmaObservatory::BiomarkerEvidenceByYearResponse.new(
|
|
35
|
+
dataset: null,
|
|
36
|
+
grain: null,
|
|
37
|
+
object_type: null,
|
|
38
|
+
id: null,
|
|
39
|
+
scope: null,
|
|
40
|
+
columns: null,
|
|
41
|
+
rows: null,
|
|
42
|
+
total: null,
|
|
43
|
+
next_cursor: null,
|
|
44
|
+
sort: null,
|
|
45
|
+
filters: null,
|
|
46
|
+
group_by: null,
|
|
47
|
+
measures: null,
|
|
48
|
+
attribution: null,
|
|
49
|
+
source_credit: null,
|
|
50
|
+
withheld_tiers: null,
|
|
51
|
+
withheld_columns: null,
|
|
52
|
+
freshness: null,
|
|
53
|
+
build: null,
|
|
54
|
+
build_state: null,
|
|
55
|
+
restriction: null
|
|
56
|
+
)
|
|
57
|
+
```
|
|
58
|
+
|