ngs_server 0.1 → 0.2
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- data/bin/ngs_server +72 -50
- data/ext/bamtools/extconf.rb +3 -3
- data/ext/vcftools/Makefile +28 -0
- data/ext/vcftools/README.txt +36 -0
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- data/ext/vcftools/cpp/vcf_file_output.cpp +3012 -0
- data/ext/vcftools/cpp/vcftools.cpp +107 -0
- data/ext/vcftools/cpp/vcftools.h +25 -0
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- data/ext/vcftools/extconf.rb +2 -0
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vcf-fix-newlines
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vcf-annotate
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tab-to-vcf
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file
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2011-08-04T11:53:06.302198Z
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2322
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vcf-to-tab
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file
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535
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2392
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vcf-compare
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2011-10-07T08:38:40.000000Z
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2011-09-30T14:22:10.590539Z
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41477
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fill-an-ac
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2010-11-24T13:28:39.405855Z
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vcf-sort
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file
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2011-10-07T08:38:40.000000Z
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614
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2011-01-04T09:01:32.488546Z
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fill-aa
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file
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2011-10-07T08:38:40.000000Z
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648
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77a8a0d2389f6cc6ea3d7b4504900e18
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2010-11-24T13:28:39.405855Z
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341
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petulda
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has-props
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|
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|
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669
|
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670
|
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671
|
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|
672
|
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|
673
|
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2732
|
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|
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|
675
|
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vcf-shuffle-cols
|
676
|
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file
|
677
|
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678
|
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|
679
|
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|
680
|
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2011-10-07T08:38:40.000000Z
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682
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df0be0673b015ab39e32983ab69364ad
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2010-11-24T13:28:39.405855Z
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684
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341
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petulda
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has-props
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694
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695
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703
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704
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705
|
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|
706
|
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|
707
|
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2301
|
708
|
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|
709
|
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VcfStats.pm
|
710
|
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file
|
711
|
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|
712
|
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713
|
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|
714
|
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2011-10-07T08:38:40.000000Z
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716
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8203772c528e54a726c5b5a3b0773dff
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2011-03-22T13:15:53.090189Z
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718
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476
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719
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petulda
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720
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721
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722
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723
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724
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725
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726
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727
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728
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729
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730
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731
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732
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733
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|
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735
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736
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738
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739
|
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|
740
|
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|
741
|
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18147
|
742
|
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|
743
|
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vcf-stats
|
744
|
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file
|
745
|
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|
746
|
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|
747
|
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|
748
|
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749
|
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2011-10-07T08:38:40.000000Z
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750
|
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def8d2ed8a0895c62e8303c4bd2a6dfe
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751
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2011-03-22T13:17:21.979784Z
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752
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477
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petulda
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has-props
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762
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763
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764
|
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|
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|
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|
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768
|
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|
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770
|
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771
|
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772
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773
|
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|
774
|
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|
775
|
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4874
|
776
|
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|
777
|
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vcf-merge
|
778
|
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file
|
779
|
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|
780
|
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|
781
|
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|
782
|
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783
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2011-10-07T08:38:40.000000Z
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784
|
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739b65f8dd007031bdac966bbbe76cc3
|
785
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2011-09-16T08:45:54.515797Z
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786
|
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608
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787
|
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petulda
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|
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has-props
|
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|
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|
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|
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|
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794
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|
795
|
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796
|
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797
|
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798
|
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|
799
|
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|
800
|
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801
|
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|
802
|
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|
803
|
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|
804
|
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|
805
|
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|
806
|
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|
807
|
+
|
808
|
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|
809
|
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19509
|
810
|
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|
811
|
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Makefile
|
812
|
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file
|
813
|
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|
814
|
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|
815
|
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|
816
|
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|
817
|
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2011-10-07T08:38:40.000000Z
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818
|
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5056f67ed00f28883e83e129f4b1f27a
|
819
|
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2011-08-30T08:02:13.539193Z
|
820
|
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601
|
821
|
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petulda
|
822
|
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|
823
|
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|
824
|
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|
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|
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827
|
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|
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|
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|
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|
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830
|
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|
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|
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832
|
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833
|
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|
834
|
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835
|
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|
836
|
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|
837
|
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838
|
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839
|
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840
|
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841
|
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842
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843
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447
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844
|
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|