RubyGems - myexperiment-rest - Versions diffs - 0.2.7 → 0.2.8 - Mend

myexperiment-rest 0.2.7 → 0.2.8

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data/bin/get_workflow_data.rb +7 -0
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data/doc/rdoc/MyExperimentREST.html +160 -0
data/doc/rdoc/MyExperimentREST/TavernaIOData.html +255 -0
data/doc/rdoc/MyExperimentREST/TavernaUser.html +303 -0
data/doc/rdoc/MyExperimentREST/TavernaWorkflow.html +346 -0
data/doc/rdoc/MyExperimentREST/Workflows.html +258 -0
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data/doc/rdoc/js/darkfish.js +116 -0
data/doc/rdoc/js/jquery.js +32 -0
data/doc/rdoc/js/quicksearch.js +114 -0
data/doc/rdoc/js/thickbox-compressed.js +10 -0
data/doc/rdoc/lib/myexperiment-rest/myexperiment_rest_rb.html +60 -0
data/doc/rdoc/lib/myexperiment-rest_rb.html +54 -0
data/doc/rdoc/rdoc.css +763 -0
data/lib/myexperiment-rest/myexperiment_rest.rb +53 -9
metadata +41 -52
data/doc/classes/MyExperimentREST.html +0 -113
data/doc/classes/MyExperimentREST/IOData.html +0 -169
data/doc/classes/MyExperimentREST/IOData.src/M000003.html +0 -20
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data/doc/files/lib/myexperiment-rest/myexperiment_rest_rb.html +0 -110
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data/doc/files/test/test_read_workflow_rb.html +0 -122
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data/doc/rdoc/classes/MyExperimentREST/TavernaIOData.html +0 -178
data/doc/rdoc/classes/MyExperimentREST/TavernaWorkflow.html +0 -223
data/doc/rdoc/classes/MyExperimentREST/Workflows.html +0 -199
data/doc/rdoc/files/CHANGES.html +0 -130
data/doc/rdoc/files/LICENSE.html +0 -133
data/doc/rdoc/files/README.html +0 -146
data/doc/rdoc/files/lib/myexperiment-rest/myexperiment_rest_rb.html +0 -110
data/doc/rdoc/files/lib/myexperiment-rest_rb.html +0 -108
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data/doc/rdoc/rdoc-style.css +0 -208

data/doc/rdoc/MyExperimentREST/TavernaIOData.html ADDED Viewed

@@ -0,0 +1,255 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN"
+  "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd">
+<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
+<head>
+  <meta content="text/html; charset=UTF-8" http-equiv="Content-Type" />
+  <title>Class: MyExperimentREST::TavernaIOData</title>
+  <link rel="stylesheet" href="../rdoc.css" type="text/css" media="screen" />
+  <script src="../js/jquery.js" type="text/javascript" charset="utf-8"></script>
+  <script src="../js/thickbox-compressed.js" type="text/javascript" charset="utf-8"></script>
+  <script src="../js/quicksearch.js" type="text/javascript" charset="utf-8"></script>
+  <script src="../js/darkfish.js" type="text/javascript" charset="utf-8"></script>
+</head>
+<body id="top" class="class">
+  <div id="metadata">
+    <div id="home-metadata">
+      <div id="home-section" class="section">
+        <h3 class="section-header">
+          <a href="../index.html">Home</a>
+          <a href="../index.html#classes">Classes</a>
+          <a href="../index.html#methods">Methods</a>
+        </h3>
+      </div>
+    </div>
+    <div id="file-metadata">
+      <div id="file-list-section" class="section">
+        <h3 class="section-header">In Files</h3>
+        <div class="section-body">
+          <ul>
+            <li><a href="../lib/myexperiment-rest/myexperiment_rest_rb.html?TB_iframe=true&amp;height=550&amp;width=785"
+              class="thickbox" title="lib/myexperiment-rest/myexperiment_rest.rb">lib/myexperiment-rest/myexperiment_rest.rb</a></li>
+          </ul>
+        </div>
+      </div>
+    </div>
+    <div id="class-metadata">
+      <!-- Parent Class -->
+      <div id="parent-class-section" class="section">
+        <h3 class="section-header">Parent</h3>
+        <p class="link">Object</p>
+      </div>
+      <!-- Method Quickref -->
+      <div id="method-list-section" class="section">
+        <h3 class="section-header">Methods</h3>
+        <ul class="link-list">
+          <li><a href="#method-c-new">::new</a></li>
+        </ul>
+      </div>
+    </div>
+    <div id="project-metadata">
+      <div id="fileindex-section" class="section project-section">
+        <h3 class="section-header">Files</h3>
+        <ul>
+          <li class="file"><a href="../CHANGES.html">CHANGES</a></li>
+          <li class="file"><a href="../LICENSE.html">LICENSE</a></li>
+          <li class="file"><a href="../README.html">README</a></li>
+        </ul>
+      </div>
+      <div id="classindex-section" class="section project-section">
+        <h3 class="section-header">Class/Module Index
+          <span class="search-toggle"><img src="../images/find.png"
+            height="16" width="16" alt="[+]"
+            title="show/hide quicksearch" /></span></h3>
+        <form action="#" method="get" accept-charset="utf-8" class="initially-hidden">
+        <fieldset>
+          <legend>Quicksearch</legend>
+          <input type="text" name="quicksearch" value=""
+            class="quicksearch-field" />
+        </fieldset>
+        </form>
+        <ul class="link-list">
+          <li><a href="../MyExperimentREST.html">MyExperimentREST</a></li>
+          <li><a href="../MyExperimentREST/TavernaIOData.html">MyExperimentREST::TavernaIOData</a></li>
+          <li><a href="../MyExperimentREST/TavernaUser.html">MyExperimentREST::TavernaUser</a></li>
+          <li><a href="../MyExperimentREST/TavernaWorkflow.html">MyExperimentREST::TavernaWorkflow</a></li>
+          <li><a href="../MyExperimentREST/Workflows.html">MyExperimentREST::Workflows</a></li>
+        </ul>
+        <div id="no-class-search-results" style="display: none;">No matching classes.</div>
+      </div>
+    </div>
+  </div>
+  <div id="documentation">
+    <h1 class="class">MyExperimentREST::TavernaIOData</h1>
+    <div id="description" class="description">
+<p>Contains all available information about an input or output: name,
+descriptions and examples. The last two are lists.</p>
+    </div><!-- description -->
+    <div id="5Buntitled-5D" class="documentation-section">
+      <!-- Attributes -->
+      <div id="attribute-method-details" class="method-section section">
+        <h3 class="section-header">Attributes</h3>
+        <div id="descriptions-attribute-method" class="method-detail">
+          <a name="descriptions"></a>
+          <div class="method-heading attribute-method-heading">
+            <span class="method-name">descriptions</span><span
+              class="attribute-access-type">[R]</span>
+          </div>
+          <div class="method-description">
+          </div>
+        </div>
+        <div id="examples-attribute-method" class="method-detail">
+          <a name="examples"></a>
+          <div class="method-heading attribute-method-heading">
+            <span class="method-name">examples</span><span
+              class="attribute-access-type">[R]</span>
+          </div>
+          <div class="method-description">
+          </div>
+        </div>
+        <div id="name-attribute-method" class="method-detail">
+          <a name="name"></a>
+          <div class="method-heading attribute-method-heading">
+            <span class="method-name">name</span><span
+              class="attribute-access-type">[R]</span>
+          </div>
+          <div class="method-description">
+          </div>
+        </div>
+      </div><!-- attribute-method-details -->
+      <!-- Methods -->
+      <div id="public-class-method-details" class="method-section section">
+        <h3 class="section-header">Public Class Methods</h3>
+        <div id="new-method" class="method-detail ">
+          <a name="method-c-new"></a>
+          <div class="method-heading">
+            <span class="method-name">new</span><span
+              class="method-args">(name, descriptions, examples)</span>
+            <span class="method-click-advice">click to toggle source</span>
+          </div>
+          <div class="method-description">
+            <div class="method-source-code" id="new-source">
+<pre>
+<span class="ruby-comment"># File lib/myexperiment-rest/myexperiment_rest.rb, line 160</span>
+<span class="ruby-keyword">def</span> <span class="ruby-identifier">initialize</span>(<span class="ruby-identifier">name</span>, <span class="ruby-identifier">descriptions</span>, <span class="ruby-identifier">examples</span>)
+  <span class="ruby-ivar">@name</span> = <span class="ruby-identifier">name</span>
+  <span class="ruby-ivar">@descriptions</span> = <span class="ruby-identifier">descriptions</span>
+  <span class="ruby-ivar">@examples</span> = <span class="ruby-identifier">examples</span>
+<span class="ruby-keyword">end</span></pre>
+            </div><!-- new-source -->
+          </div>
+        </div><!-- new-method -->
+      </div><!-- public-class-method-details -->
+    </div><!-- 5Buntitled-5D -->
+  </div><!-- documentation -->
+  <div id="validator-badges">
+    <p><small><a href="http://validator.w3.org/check/referer">[Validate]</a></small></p>
+    <p><small>Generated with the <a href="http://deveiate.org/projects/Darkfish-Rdoc/">Darkfish
+      Rdoc Generator</a> 2</small>.</p>
+  </div>
+</body>
+</html>

data/doc/rdoc/MyExperimentREST/TavernaUser.html ADDED Viewed

@@ -0,0 +1,303 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN"
+  "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd">
+<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
+<head>
+  <meta content="text/html; charset=UTF-8" http-equiv="Content-Type" />
+  <title>Class: MyExperimentREST::TavernaUser</title>
+  <link rel="stylesheet" href="../rdoc.css" type="text/css" media="screen" />
+  <script src="../js/jquery.js" type="text/javascript" charset="utf-8"></script>
+  <script src="../js/thickbox-compressed.js" type="text/javascript" charset="utf-8"></script>
+  <script src="../js/quicksearch.js" type="text/javascript" charset="utf-8"></script>
+  <script src="../js/darkfish.js" type="text/javascript" charset="utf-8"></script>
+</head>
+<body id="top" class="class">
+  <div id="metadata">
+    <div id="home-metadata">
+      <div id="home-section" class="section">
+        <h3 class="section-header">
+          <a href="../index.html">Home</a>
+          <a href="../index.html#classes">Classes</a>
+          <a href="../index.html#methods">Methods</a>
+        </h3>
+      </div>
+    </div>
+    <div id="file-metadata">
+      <div id="file-list-section" class="section">
+        <h3 class="section-header">In Files</h3>
+        <div class="section-body">
+          <ul>
+            <li><a href="../lib/myexperiment-rest/myexperiment_rest_rb.html?TB_iframe=true&amp;height=550&amp;width=785"
+              class="thickbox" title="lib/myexperiment-rest/myexperiment_rest.rb">lib/myexperiment-rest/myexperiment_rest.rb</a></li>
+          </ul>
+        </div>
+      </div>
+    </div>
+    <div id="class-metadata">
+      <!-- Parent Class -->
+      <div id="parent-class-section" class="section">
+        <h3 class="section-header">Parent</h3>
+        <p class="link">Object</p>
+      </div>
+      <!-- Method Quickref -->
+      <div id="method-list-section" class="section">
+        <h3 class="section-header">Methods</h3>
+        <ul class="link-list">
+          <li><a href="#method-c-new">::new</a></li>
+        </ul>
+      </div>
+    </div>
+    <div id="project-metadata">
+      <div id="fileindex-section" class="section project-section">
+        <h3 class="section-header">Files</h3>
+        <ul>
+          <li class="file"><a href="../CHANGES.html">CHANGES</a></li>
+          <li class="file"><a href="../LICENSE.html">LICENSE</a></li>
+          <li class="file"><a href="../README.html">README</a></li>
+        </ul>
+      </div>
+      <div id="classindex-section" class="section project-section">
+        <h3 class="section-header">Class/Module Index
+          <span class="search-toggle"><img src="../images/find.png"
+            height="16" width="16" alt="[+]"
+            title="show/hide quicksearch" /></span></h3>
+        <form action="#" method="get" accept-charset="utf-8" class="initially-hidden">
+        <fieldset>
+          <legend>Quicksearch</legend>
+          <input type="text" name="quicksearch" value=""
+            class="quicksearch-field" />
+        </fieldset>
+        </form>
+        <ul class="link-list">
+          <li><a href="../MyExperimentREST.html">MyExperimentREST</a></li>
+          <li><a href="../MyExperimentREST/TavernaIOData.html">MyExperimentREST::TavernaIOData</a></li>
+          <li><a href="../MyExperimentREST/TavernaUser.html">MyExperimentREST::TavernaUser</a></li>
+          <li><a href="../MyExperimentREST/TavernaWorkflow.html">MyExperimentREST::TavernaWorkflow</a></li>
+          <li><a href="../MyExperimentREST/Workflows.html">MyExperimentREST::Workflows</a></li>
+        </ul>
+        <div id="no-class-search-results" style="display: none;">No matching classes.</div>
+      </div>
+    </div>
+  </div>
+  <div id="documentation">
+    <h1 class="class">MyExperimentREST::TavernaUser</h1>
+    <div id="description" class="description">
+<p>Contains all available information about an input or output: name,
+descriptions and examples. The last two are lists.</p>
+    </div><!-- description -->
+    <div id="5Buntitled-5D" class="documentation-section">
+      <!-- Attributes -->
+      <div id="attribute-method-details" class="method-section section">
+        <h3 class="section-header">Attributes</h3>
+        <div id="avatar-attribute-method" class="method-detail">
+          <a name="avatar"></a>
+          <div class="method-heading attribute-method-heading">
+            <span class="method-name">avatar</span><span
+              class="attribute-access-type">[R]</span>
+          </div>
+          <div class="method-description">
+          </div>
+        </div>
+        <div id="created_at-attribute-method" class="method-detail">
+          <a name="created_at"></a>
+          <div class="method-heading attribute-method-heading">
+            <span class="method-name">created_at</span><span
+              class="attribute-access-type">[R]</span>
+          </div>
+          <div class="method-description">
+          </div>
+        </div>
+        <div id="description-attribute-method" class="method-detail">
+          <a name="description"></a>
+          <div class="method-heading attribute-method-heading">
+            <span class="method-name">description</span><span
+              class="attribute-access-type">[R]</span>
+          </div>
+          <div class="method-description">
+          </div>
+        </div>
+        <div id="email-attribute-method" class="method-detail">
+          <a name="email"></a>
+          <div class="method-heading attribute-method-heading">
+            <span class="method-name">email</span><span
+              class="attribute-access-type">[R]</span>
+          </div>
+          <div class="method-description">
+          </div>
+        </div>
+        <div id="name-attribute-method" class="method-detail">
+          <a name="name"></a>
+          <div class="method-heading attribute-method-heading">
+            <span class="method-name">name</span><span
+              class="attribute-access-type">[R]</span>
+          </div>
+          <div class="method-description">
+          </div>
+        </div>
+        <div id="website-attribute-method" class="method-detail">
+          <a name="website"></a>
+          <div class="method-heading attribute-method-heading">
+            <span class="method-name">website</span><span
+              class="attribute-access-type">[R]</span>
+          </div>
+          <div class="method-description">
+          </div>
+        </div>
+      </div><!-- attribute-method-details -->
+      <!-- Methods -->
+      <div id="public-class-method-details" class="method-section section">
+        <h3 class="section-header">Public Class Methods</h3>
+        <div id="new-method" class="method-detail ">
+          <a name="method-c-new"></a>
+          <div class="method-heading">
+            <span class="method-name">new</span><span
+              class="method-args">(name, description, email, avatar, website, created_at)</span>
+            <span class="method-click-advice">click to toggle source</span>
+          </div>
+          <div class="method-description">
+            <div class="method-source-code" id="new-source">
+<pre>
+<span class="ruby-comment"># File lib/myexperiment-rest/myexperiment_rest.rb, line 176</span>
+<span class="ruby-keyword">def</span> <span class="ruby-identifier">initialize</span>(<span class="ruby-identifier">name</span>, <span class="ruby-identifier">description</span>, <span class="ruby-identifier">email</span>, <span class="ruby-identifier">avatar</span>, <span class="ruby-identifier">website</span>, <span class="ruby-identifier">created_at</span>)
+  <span class="ruby-ivar">@name</span> = <span class="ruby-identifier">name</span>
+  <span class="ruby-ivar">@description</span> = <span class="ruby-identifier">description</span>
+  <span class="ruby-ivar">@email</span> = <span class="ruby-identifier">email</span>
+  <span class="ruby-ivar">@avatar</span> = <span class="ruby-identifier">avatar</span>
+  <span class="ruby-ivar">@website</span> = <span class="ruby-identifier">website</span>
+  <span class="ruby-ivar">@created_at</span> = <span class="ruby-identifier">created_at</span>
+<span class="ruby-keyword">end</span></pre>
+            </div><!-- new-source -->
+          </div>
+        </div><!-- new-method -->
+      </div><!-- public-class-method-details -->
+    </div><!-- 5Buntitled-5D -->
+  </div><!-- documentation -->
+  <div id="validator-badges">
+    <p><small><a href="http://validator.w3.org/check/referer">[Validate]</a></small></p>
+    <p><small>Generated with the <a href="http://deveiate.org/projects/Darkfish-Rdoc/">Darkfish
+      Rdoc Generator</a> 2</small>.</p>
+  </div>
+</body>
+</html>