RubyGems - myexperiment-rest - Versions diffs - 0.2.7 → 0.2.8 - Mend

myexperiment-rest 0.2.7 → 0.2.8

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-                <a href="../files/lib/myexperiment-rest_rb.html">
-                lib/myexperiment-rest.rb
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-Class <a href="MyExperimentREST/TavernaWorkflow.html" class="link">MyExperimentREST::TavernaWorkflow</a><br />
-Class <a href="MyExperimentREST/Workflows.html" class="link">MyExperimentREST::Workflows</a><br />
-    </div>
-    <!-- if method_list -->
-  </div>
-<div id="validator-badges">
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-  <title>Class: MyExperimentREST::TavernaIOData</title>
-  <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1" />
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-          <td class="class-name-in-header">MyExperimentREST::TavernaIOData</td>
-        </tr>
-        <tr class="top-aligned-row">
-            <td><strong>In:</strong></td>
-            <td>
-                <a href="../../files/lib/myexperiment-rest/myexperiment_rest_rb.html">
-                lib/myexperiment-rest/myexperiment_rest.rb
-                </a>
-        <br />
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-        </tr>
-        <tr class="top-aligned-row">
-            <td><strong>Parent:</strong></td>
-            <td>
-                Object
-            </td>
-        </tr>
-        </table>
-    </div>
-  <!-- banner header -->
-  <div id="bodyContent">
-  <div id="contextContent">
-    <div id="description">
-      <p>
-Contains all available information about an input or output: name,
-descriptions and examples. The last two are lists.
-</p>
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-   </div>
-    <div id="method-list">
-      <h3 class="section-bar">Methods</h3>
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-          <td class="context-item-desc"></td>
-        </tr>
-        <tr class="top-aligned-row context-row">
-          <td class="context-item-name">examples</td>
-          <td class="context-item-value">&nbsp;[R]&nbsp;</td>
-          <td class="context-item-desc"></td>
-        </tr>
-        <tr class="top-aligned-row context-row">
-          <td class="context-item-name">name</td>
-          <td class="context-item-value">&nbsp;[R]&nbsp;</td>
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-    <div id="methods">
-      <h3 class="section-bar">Public Class methods</h3>
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-        <div class="method-heading">
-          <a href="#M000003" class="method-signature">
-          <span class="method-name">new</span><span class="method-args">(name, descriptions, examples)</span>
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-        <div class="method-description">
-          <p><a class="source-toggle" href="#"
-            onclick="toggleCode('M000003-source');return false;">[Source]</a></p>
-          <div class="method-source-code" id="M000003-source">
-<pre>
-     <span class="ruby-comment cmt"># File lib/myexperiment-rest/myexperiment_rest.rb, line 136</span>
-136:     <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">initialize</span>(<span class="ruby-identifier">name</span>, <span class="ruby-identifier">descriptions</span>, <span class="ruby-identifier">examples</span>)
-137:       <span class="ruby-ivar">@name</span> = <span class="ruby-identifier">name</span>
-138:       <span class="ruby-ivar">@descriptions</span> = <span class="ruby-identifier">descriptions</span>
-139:       <span class="ruby-ivar">@examples</span> = <span class="ruby-identifier">examples</span>
-140:     <span class="ruby-keyword kw">end</span>
-</pre>
-          </div>
-        </div>
-      </div>
-    </div>
-  </div>
-<div id="validator-badges">
-  <p><small><a href="http://validator.w3.org/check/referer">[Validate]</a></small></p>
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-  <title>Class: MyExperimentREST::TavernaWorkflow</title>
-  <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1" />
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-    <div id="classHeader">
-        <table class="header-table">
-        <tr class="top-aligned-row">
-          <td><strong>Class</strong></td>
-          <td class="class-name-in-header">MyExperimentREST::TavernaWorkflow</td>
-        </tr>
-        <tr class="top-aligned-row">
-            <td><strong>In:</strong></td>
-            <td>
-                <a href="../../files/lib/myexperiment-rest/myexperiment_rest_rb.html">
-                lib/myexperiment-rest/myexperiment_rest.rb
-                </a>
-        <br />
-            </td>
-        </tr>
-        <tr class="top-aligned-row">
-            <td><strong>Parent:</strong></td>
-            <td>
-                Object
-            </td>
-        </tr>
-        </table>
-    </div>
-  <!-- banner header -->
-  <div id="bodyContent">
-  <div id="contextContent">
-    <div id="description">
-      <p>
-Contains all available information about a workflow: <em>input_type</em>,
-<em>xml_uri</em>, <em>title</em>, <em>description</em>, <em>inputs</em> and
-<em>outputs</em>. The <em>xml_uri</em> specifies the XML description on
-myExperiment and not the XML of the workflow itself. <em>input_type</em>
-specifies the kind of input. Currently, either &quot;myexperiment&quot;
-(myExperiment&#8216;s xml uri) or &quot;t2flow&quot; (filename)
-</p>
-    </div>
-   </div>
-    <div id="method-list">
-      <h3 class="section-bar">Methods</h3>
-      <div class="name-list">
-      <a href="#M000002">new</a>&nbsp;&nbsp;
-      </div>
-    </div>
-  </div>
-    <!-- if includes -->
-    <div id="section">
-    <div id="constants-list">
-      <h3 class="section-bar">Constants</h3>
-      <div class="name-list">
-        <table summary="Constants">
-        <tr class="top-aligned-row context-row">
-          <td class="context-item-name">MY_EXPERIMENT</td>
-          <td>=</td>
-          <td class="context-item-value">'myexperiment'</td>
-          <td width="3em">&nbsp;</td>
-          <td class="context-item-desc">
-possible input types
-</td>
-        </tr>
-        <tr class="top-aligned-row context-row">
-          <td class="context-item-name">T2_FLOW</td>
-          <td>=</td>
-          <td class="context-item-value">'t2flow'</td>
-        </tr>
-        </table>
-      </div>
-    </div>
-    <div id="attribute-list">
-      <h3 class="section-bar">Attributes</h3>
-      <div class="name-list">
-        <table>
-        <tr class="top-aligned-row context-row">
-          <td class="context-item-name">description</td>
-          <td class="context-item-value">&nbsp;[R]&nbsp;</td>
-          <td class="context-item-desc"></td>
-        </tr>
-        <tr class="top-aligned-row context-row">
-          <td class="context-item-name">input_type</td>
-          <td class="context-item-value">&nbsp;[R]&nbsp;</td>
-          <td class="context-item-desc"></td>
-        </tr>
-        <tr class="top-aligned-row context-row">
-          <td class="context-item-name">inputs</td>
-          <td class="context-item-value">&nbsp;[R]&nbsp;</td>
-          <td class="context-item-desc"></td>
-        </tr>
-        <tr class="top-aligned-row context-row">
-          <td class="context-item-name">outputs</td>
-          <td class="context-item-value">&nbsp;[R]&nbsp;</td>
-          <td class="context-item-desc"></td>
-        </tr>
-        <tr class="top-aligned-row context-row">
-          <td class="context-item-name">title</td>
-          <td class="context-item-value">&nbsp;[R]&nbsp;</td>
-          <td class="context-item-desc"></td>
-        </tr>
-        <tr class="top-aligned-row context-row">
-          <td class="context-item-name">xml_uri</td>
-          <td class="context-item-value">&nbsp;[R]&nbsp;</td>
-          <td class="context-item-desc"></td>
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-        </table>
-      </div>
-    </div>
-    <!-- if method_list -->
-    <div id="methods">
-      <h3 class="section-bar">Public Class methods</h3>
-      <div id="method-M000002" class="method-detail">
-        <a name="M000002"></a>
-        <div class="method-heading">
-          <a href="#M000002" class="method-signature">
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-        </div>
-        <div class="method-description">
-          <p><a class="source-toggle" href="#"
-            onclick="toggleCode('M000002-source');return false;">[Source]</a></p>
-          <div class="method-source-code" id="M000002-source">
-<pre>
-     <span class="ruby-comment cmt"># File lib/myexperiment-rest/myexperiment_rest.rb, line 114</span>
-114:     <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">initialize</span>(<span class="ruby-identifier">input_type</span>, <span class="ruby-identifier">xml_uri</span>, <span class="ruby-identifier">title</span>, <span class="ruby-identifier">description</span>, <span class="ruby-identifier">inputs</span>, <span class="ruby-identifier">outputs</span>)
-115:       <span class="ruby-ivar">@input_type</span> = <span class="ruby-identifier">input_type</span>
-116:       <span class="ruby-ivar">@xml_uri</span> = <span class="ruby-identifier">xml_uri</span>
-117:       <span class="ruby-ivar">@title</span> = <span class="ruby-identifier">title</span>
-118:       <span class="ruby-ivar">@description</span> = <span class="ruby-identifier">description</span>
-119:       <span class="ruby-ivar">@inputs</span> = <span class="ruby-identifier">inputs</span>
-120:       <span class="ruby-ivar">@outputs</span> = <span class="ruby-identifier">outputs</span>
-121:     <span class="ruby-keyword kw">end</span>
-</pre>
-          </div>
-        </div>
-      </div>
-    </div>
-  </div>
-<div id="validator-badges">
-  <p><small><a href="http://validator.w3.org/check/referer">[Validate]</a></small></p>
-</div>
-</body>
-</html>