mdarray 0.4.0-java
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- data/LICENSE.txt +54 -0
- data/LICENSE.txt~ +32 -0
- data/README.md +21 -0
- data/Rakefile +40 -0
- data/lib/env.rb +11 -0
- data/lib/mdarray.rb +414 -0
- data/lib/mdarray/access.rb +237 -0
- data/lib/mdarray/counter.rb +779 -0
- data/lib/mdarray/creation.rb +413 -0
- data/lib/mdarray/fast_non_numerical.rb +102 -0
- data/lib/mdarray/function_creation.rb +100 -0
- data/lib/mdarray/function_map.rb +56 -0
- data/lib/mdarray/hierarchy.rb +177 -0
- data/lib/mdarray/operators.rb +220 -0
- data/lib/mdarray/printing.rb +275 -0
- data/lib/mdarray/proc_util.rb +159 -0
- data/lib/mdarray/ruby_functions.rb +78 -0
- data/lib/mdarray/ruby_generic_functions.rb +37 -0
- data/lib/mdarray/ruby_math.rb +57 -0
- data/lib/mdarray/ruby_numeric_functions.rb +187 -0
- data/lib/mdarray/ruby_operators.rb +201 -0
- data/lib/mdarray/ruby_stats.rb +149 -0
- data/lib/mdarray/slices.rb +185 -0
- data/lib/mdarray/statistics.rb +86 -0
- data/test/arithmetic_casting.rb +195 -0
- data/test/env.rb +50 -0
- data/test/test_access.rb +247 -0
- data/test/test_boolean.rb +67 -0
- data/test/test_comparison.rb +126 -0
- data/test/test_complete.rb +69 -0
- data/test/test_counter.rb +184 -0
- data/test/test_creation.rb +364 -0
- data/test/test_error.rb +53 -0
- data/test/test_lazy.rb +52 -0
- data/test/test_operator.rb +337 -0
- data/test/test_printing.rb +66 -0
- data/test/test_shape.rb +96 -0
- data/test/test_slices.rb +146 -0
- data/test/test_speed.rb +311 -0
- data/test/test_statistics.rb +45 -0
- data/test/test_trigonometry.rb +60 -0
- data/vendor/netcdfAll-4.3.16.jar +0 -0
- data/version.rb +2 -0
- metadata +197 -0
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# -*- coding: utf-8 -*-
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##########################################################################################
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# Copyright © 2013 Rodrigo Botafogo. All Rights Reserved. Permission to use, copy, modify,
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# and distribute this software and its documentation, without fee and without a signed
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# licensing agreement, is hereby granted, provided that the above copyright notice, this
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# paragraph and the following two paragraphs appear in all copies, modifications, and
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# distributions.
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#
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# IN NO EVENT SHALL RODRIGO BOTAFOGO BE LIABLE TO ANY PARTY FOR DIRECT, INDIRECT, SPECIAL,
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# INCIDENTAL, OR CONSEQUENTIAL DAMAGES, INCLUDING LOST PROFITS, ARISING OUT OF THE USE OF
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# THIS SOFTWARE AND ITS DOCUMENTATION, EVEN IF RODRIGO BOTAFOGO HAS BEEN ADVISED OF THE
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# POSSIBILITY OF SUCH DAMAGE.
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#
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# RODRIGO BOTAFOGO SPECIFICALLY DISCLAIMS ANY WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
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# THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE. THE
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# SOFTWARE AND ACCOMPANYING DOCUMENTATION, IF ANY, PROVIDED HEREUNDER IS PROVIDED "AS IS".
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# RODRIGO BOTAFOGO HAS NO OBLIGATION TO PROVIDE MAINTENANCE, SUPPORT, UPDATES, ENHANCEMENTS,
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# OR MODIFICATIONS.
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##########################################################################################
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class MDArray
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#------------------------------------------------------------------------------------
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#
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#------------------------------------------------------------------------------------
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def get_current_index
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@local_iterator.get_current_index
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end
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#------------------------------------------------------------------------------------
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# Returns the next element of the local_iterator or nil if no next element available
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#------------------------------------------------------------------------------------
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def next
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if (@local_iterator && @local_iterator.has_next?)
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@local_iterator.get_next
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else
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nil
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end
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end
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#------------------------------------------------------------------------------------
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# When get is used to retrieve an element, it is assumed that the index does not need
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# correction, for instance, no negative index is allowed. If one wants to use
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# negative indexes, then method [] should be used. So mat.get([-1, 0, 0]) raises an
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# exception while mat[-1, 0, 0] gets the last value for the first dimension.
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#------------------------------------------------------------------------------------
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def [](*index)
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if (index.size != 0)
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@local_index[*index]
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elsif (@local_iterator)
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@local_iterator.get_current
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else
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raise "No iterator defined! Cannot get element"
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end
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end
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#------------------------------------------------------------------------------------
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#
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#------------------------------------------------------------------------------------
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def get(index = nil)
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@local_index.get(index)
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end
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#------------------------------------------------------------------------------------
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# Gets the next element of the local iterator
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#------------------------------------------------------------------------------------
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def get_next
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if (@local_iterator)
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@local_iterator.get_next
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else
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raise "No iterator defined! Cannot get next element"
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end
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end
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#------------------------------------------------------------------------------------
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#
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#------------------------------------------------------------------------------------
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def []=(*index, value)
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if (index.size != 0)
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@local_index[index] = value
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elsif (@local_iterator)
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@local_iterator.set_current(value)
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else
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raise "No iterator defined! Cannot set element value"
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end
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end
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#---------------------------------------------------------------------------------------
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# When set is used to assign to an element, it is assumed that the index does not need
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# correction, for instance, no negative index is allowed. If one wants to use
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# negative indexes, then method set should be used. So mat[-1, 0, 0] = 10, raises an
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# exection while mat.set([-1, 0, 0], 10) sets the last value for the first dimension.
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# *<tt>index</tt>: array with the index position
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# *<tt>value</tt>: value to be set
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#---------------------------------------------------------------------------------------
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def set(index, value)
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@local_index.set(index, value)
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end
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#---------------------------------------------------------------------------------------
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#
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#---------------------------------------------------------------------------------------
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def set_next(value)
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if (@local_iterator)
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@local_iterator.set_next(value)
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else
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raise "No iterator defined! Cannot set element value"
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end
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end
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#------------------------------------------------------------------------------------
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#
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#------------------------------------------------------------------------------------
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def get_counter
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Counter.new(self)
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end
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#------------------------------------------------------------------------------------
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#
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#------------------------------------------------------------------------------------
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def reset_traversal
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@local_iterator = get_iterator_fast
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end
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#------------------------------------------------------------------------------------
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#
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#------------------------------------------------------------------------------------
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def each
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iterator = get_iterator_fast
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while (iterator.has_next?)
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yield iterator.get_next if block_given?
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end
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end
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# (1) Each creates a new iterator and does not touch the @local_iterator so that
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# one should be able to call each from different threads. Still, should be careful
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# if another thread adds or removes elements from the array. Needs to check what
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# happens in this situation
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#------------------------------------------------------------------------------------
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# Cycles through the whole list of elements yielding to a block (if given) the next
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# element and its index. The index is a ruby array.
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#------------------------------------------------------------------------------------
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def each_with_counter
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iterator = get_iterator_fast
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while (iterator.has_next?)
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yield iterator.get_next, iterator.get_current_counter if block_given?
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end
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end
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#------------------------------------------------------------------------------------
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# Continues a each from the position the @local_iterator is in. each_cont cannot be
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# called from multiple threads as there is only one @local_iterator.
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#------------------------------------------------------------------------------------
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def each_cont
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while (elmt = self.next)
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yield elmt if block_given?
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end
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end
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#------------------------------------------------------------------------------------
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#
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#------------------------------------------------------------------------------------
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def each_along_axes(axes)
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counter = Counter.new(self)
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sizes = Array.new
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(0..rank - 1).each do |axis|
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if (axes.include?(axis))
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sizes[axis] = 1
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else
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sizes[axis] = shape[axis]
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end
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end
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counter.each_along_axes(axes) do |ct|
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# yield ct, sizes if block_given?
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yield section(ct, sizes, true) if block_given?
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end
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end
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#------------------------------------------------------------------------------------
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#
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#------------------------------------------------------------------------------------
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private
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#------------------------------------------------------------------------------------
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# Cycles through the whole list of elements yielding to a block (if given) the next
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# element and its iterator. Was made private so that users do not need to know about
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# iterator. Giving iterator could be a speed up usefule for final users concerned
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# about performance.
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#------------------------------------------------------------------------------------
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def each_with_iterator
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iterator = get_iterator_fast
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while (iterator.has_next?)
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yield iterator.get_next, iterator if block_given?
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end
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end
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end
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# -*- coding: utf-8 -*-
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##########################################################################################
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# Copyright © 2013 Rodrigo Botafogo. All Rights Reserved. Permission to use, copy, modify,
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# and distribute this software and its documentation, without fee and without a signed
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# licensing agreement, is hereby granted, provided that the above copyright notice, this
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# paragraph and the following two paragraphs appear in all copies, modifications, and
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# distributions.
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#
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# IN NO EVENT SHALL RODRIGO BOTAFOGO BE LIABLE TO ANY PARTY FOR DIRECT, INDIRECT, SPECIAL,
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# INCIDENTAL, OR CONSEQUENTIAL DAMAGES, INCLUDING LOST PROFITS, ARISING OUT OF THE USE OF
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# THIS SOFTWARE AND ITS DOCUMENTATION, EVEN IF RODRIGO BOTAFOGO HAS BEEN ADVISED OF THE
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# POSSIBILITY OF SUCH DAMAGE.
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#
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# RODRIGO BOTAFOGO SPECIFICALLY DISCLAIMS ANY WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
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# THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE. THE
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# SOFTWARE AND ACCOMPANYING DOCUMENTATION, IF ANY, PROVIDED HEREUNDER IS PROVIDED "AS IS".
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# RODRIGO BOTAFOGO HAS NO OBLIGATION TO PROVIDE MAINTENANCE, SUPPORT, UPDATES, ENHANCEMENTS,
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# OR MODIFICATIONS.
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##########################################################################################
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#=========================================================================================
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#
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#=========================================================================================
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class MDArray
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java_import 'java.lang.ClassCastException'
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#---------------------------------------------------------------------------------------
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#
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#---------------------------------------------------------------------------------------
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def get_index
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MDArray::Counter.new(self)
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end
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#---------------------------------------------------------------------------------------
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# Counters for Multidimensional arrays. A Counter refers to a particular element of an
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# array. This is a generalization of index as int[].
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#---------------------------------------------------------------------------------------
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class Counter
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include Enumerable
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attr_reader :mdarray
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attr_reader :nc_index
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attr_reader :shape
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attr_reader :start
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attr_reader :finish
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attr_reader :counter
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#------------------------------------------------------------------------------------
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#
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#------------------------------------------------------------------------------------
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def initialize(mdarray)
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@mdarray = mdarray
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@nc_index = mdarray.nc_array.getIndex()
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@shape = @nc_index.getShape().to_a
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# by default the starting index is the [0] index (first element)
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shape = @shape.dup
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set_start(shape.fill(0))
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# by default the finish index is the last element of the array
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finish = Array.new
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@shape.each do |val|
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finish << val - 1
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end
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set_finish(finish)
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end
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#-------------------------------------------------------------------------------------
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# Sets the starting position of the index
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#-------------------------------------------------------------------------------------
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def set_start(start)
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start = reshape(start)
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if (start[0])
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raise "Cannot set index starting position to an array section"
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else
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@start = start[1].reverse
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reset_counter
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end
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end
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#-------------------------------------------------------------------------------------
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# Sets the finishing position of the index
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#-------------------------------------------------------------------------------------
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def set_finish(finish)
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finish = reshape(finish)
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if (finish[0])
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raise "Cannot set index finish position to an array section"
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else
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@finish = finish[1].reverse
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end
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end
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#-------------------------------------------------------------------------------------
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# Accessor methods for start, finish and position.
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#-------------------------------------------------------------------------------------
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def start
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@start.reverse
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end
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def finish
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@finish.reverse
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end
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def counter
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@counter.reverse
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end
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#------------------------------------------------------------------------------------
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# Reset the counter to the defined start value
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#------------------------------------------------------------------------------------
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def reset_counter
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@counter = @start.dup
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end
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#-------------------------------------------------------------------------------------
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#
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#-------------------------------------------------------------------------------------
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def each
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reset_counter
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begin
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yield self.counter if block_given?
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end while(get_next_counter)
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end
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#-------------------------------------------------------------------------------------
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# Walks the counter along each of the axes. For instance if given axes [0, 2] and
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# the array shape is [4, 3, 2], then the counter will be [0, 0, 0], [0, 0, 1],
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# [1, 0, 1], [1, 0, 1], [2, 0, 0], ... [3, 0, 1]
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#-------------------------------------------------------------------------------------
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def each_along_axes(axes)
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+
|
151
|
+
reset_counter
|
152
|
+
@axes = axes
|
153
|
+
|
154
|
+
axis = [0, self.counter.size - 2]
|
155
|
+
begin
|
156
|
+
yield self.counter, axis[1] if block_given?
|
157
|
+
end while (axis = walk_along_axes)
|
158
|
+
|
159
|
+
end
|
160
|
+
|
161
|
+
#------------------------------------------------------------------------------------
|
162
|
+
# Gets the element at the given counter. If counter is not basic, try to fix it to
|
163
|
+
# its basic form.
|
164
|
+
#------------------------------------------------------------------------------------
|
165
|
+
|
166
|
+
def [](*counter)
|
167
|
+
set_counter(counter)
|
168
|
+
get_at_counter
|
169
|
+
end
|
170
|
+
|
171
|
+
#------------------------------------------------------------------------------------
|
172
|
+
# Gets the element at the given counter. Assumes that the counter is of the proper
|
173
|
+
# shape.
|
174
|
+
#------------------------------------------------------------------------------------
|
175
|
+
|
176
|
+
def get(counter)
|
177
|
+
set_counter_fast(counter)
|
178
|
+
get_at_counter
|
179
|
+
end
|
180
|
+
|
181
|
+
#------------------------------------------------------------------------------------
|
182
|
+
# Gets element at current counter. Can be done fast, as counter is always of the
|
183
|
+
# proper shape.
|
184
|
+
#------------------------------------------------------------------------------------
|
185
|
+
|
186
|
+
def get_current
|
187
|
+
set_counter_fast(self.counter)
|
188
|
+
get_at_counter
|
189
|
+
end
|
190
|
+
|
191
|
+
#------------------------------------------------------------------------------------
|
192
|
+
# Sets the value of counter. If counter is not basic, try to fix it to its basic
|
193
|
+
# form.
|
194
|
+
#------------------------------------------------------------------------------------
|
195
|
+
|
196
|
+
def []= (counter, value)
|
197
|
+
set_counter(counter)
|
198
|
+
set_at_counter(value)
|
199
|
+
end
|
200
|
+
|
201
|
+
#------------------------------------------------------------------------------------
|
202
|
+
# Sets the value of counter. Assume that counter is on its basic form.
|
203
|
+
#------------------------------------------------------------------------------------
|
204
|
+
|
205
|
+
def set(counter, value)
|
206
|
+
set_counter_fast(counter)
|
207
|
+
set_at_counter(value)
|
208
|
+
end
|
209
|
+
|
210
|
+
#------------------------------------------------------------------------------------
|
211
|
+
# Sets value of current counter. Can be done fast, as the current counter is always
|
212
|
+
# in its basic shape.
|
213
|
+
#------------------------------------------------------------------------------------
|
214
|
+
|
215
|
+
def set_current(value)
|
216
|
+
set_counter_fast(self.counter)
|
217
|
+
set_at_counter(value)
|
218
|
+
end
|
219
|
+
|
220
|
+
#-------------------------------------------------------------------------------------
|
221
|
+
#
|
222
|
+
#-------------------------------------------------------------------------------------
|
223
|
+
|
224
|
+
private
|
225
|
+
|
226
|
+
#-------------------------------------------------------------------------------------
|
227
|
+
# Returns next counter if no overflow, otherwise returns nil
|
228
|
+
#-------------------------------------------------------------------------------------
|
229
|
+
|
230
|
+
def get_next_counter
|
231
|
+
|
232
|
+
# gets the next counter
|
233
|
+
shape = @shape.dup.reverse
|
234
|
+
|
235
|
+
@counter.each_with_index do |val, index|
|
236
|
+
|
237
|
+
if val < shape[index] - 1
|
238
|
+
@counter[index] = val + 1
|
239
|
+
return counter
|
240
|
+
else
|
241
|
+
@counter[index] = 0
|
242
|
+
end
|
243
|
+
|
244
|
+
end
|
245
|
+
|
246
|
+
return nil
|
247
|
+
|
248
|
+
end
|
249
|
+
|
250
|
+
#-------------------------------------------------------------------------------------
|
251
|
+
#
|
252
|
+
#-------------------------------------------------------------------------------------
|
253
|
+
|
254
|
+
def walk_along_axes
|
255
|
+
|
256
|
+
axes = @axes.dup.reverse
|
257
|
+
|
258
|
+
axes.each do |axis|
|
259
|
+
|
260
|
+
index = @counter.size - axis - 1
|
261
|
+
if (@counter[index] < @shape[axis] - 1)
|
262
|
+
@counter[index] = @counter[index] + 1
|
263
|
+
return @counter, axis
|
264
|
+
else
|
265
|
+
@counter[index] = 0
|
266
|
+
end
|
267
|
+
|
268
|
+
end
|
269
|
+
|
270
|
+
return nil
|
271
|
+
|
272
|
+
end
|
273
|
+
|
274
|
+
#-------------------------------------------------------------------------------------
|
275
|
+
# If given index has negative values, then reshape it so that it only has positive
|
276
|
+
# values.
|
277
|
+
# check if it is a range: regex of the form /x/ or /x:y/ or /x:y:z/
|
278
|
+
#-------------------------------------------------------------------------------------
|
279
|
+
|
280
|
+
def reshape(counter)
|
281
|
+
|
282
|
+
if (counter.size != @shape.size)
|
283
|
+
raise "Counter shape #{counter} is not compatible with iterator shape #{@shape}"
|
284
|
+
end
|
285
|
+
|
286
|
+
reshaped_counter = Array.new
|
287
|
+
section = false
|
288
|
+
|
289
|
+
counter.each_with_index do |val, ind|
|
290
|
+
|
291
|
+
if (val.is_a? Integer)
|
292
|
+
if (val < 0)
|
293
|
+
new_ind = @shape[ind] + val
|
294
|
+
if (new_ind < 0)
|
295
|
+
raise "Counter shape #{counter} is not compatible with iterator shape #{@shape}"
|
296
|
+
end
|
297
|
+
reshaped_counter[ind] = new_ind
|
298
|
+
elsif (val >= @shape[ind])
|
299
|
+
raise "Counter shape #{counter} is not compatible with iterator shape #{@shape}"
|
300
|
+
else
|
301
|
+
reshaped_counter[ind] = counter[ind]
|
302
|
+
end
|
303
|
+
|
304
|
+
elsif (val.is_a? Regexp)
|
305
|
+
section = true
|
306
|
+
else
|
307
|
+
raise "Invalid index format: #{val}"
|
308
|
+
end
|
309
|
+
|
310
|
+
end
|
311
|
+
|
312
|
+
[section, reshaped_counter]
|
313
|
+
|
314
|
+
end
|
315
|
+
|
316
|
+
#-------------------------------------------------------------------------------------
|
317
|
+
# Sets this index to point to the given counter. assumes that the counter respects
|
318
|
+
# the shape constraints.
|
319
|
+
#-------------------------------------------------------------------------------------
|
320
|
+
|
321
|
+
def set_counter_fast(counter)
|
322
|
+
|
323
|
+
begin
|
324
|
+
@nc_index.set(counter.to_java :int)
|
325
|
+
rescue java.lang.ArrayIndexOutOfBoundsException
|
326
|
+
raise RangeError, "Invalid counter: #{counter}"
|
327
|
+
end
|
328
|
+
|
329
|
+
end
|
330
|
+
|
331
|
+
#-------------------------------------------------------------------------------------
|
332
|
+
# Sets this index to point to the given counter. If given counter has negative values
|
333
|
+
# then convert them to positive values, making sure that the counter respects the
|
334
|
+
# shape constraints. The given counter is a list of elements as (2, 3, 3) and not and
|
335
|
+
# array.
|
336
|
+
#-------------------------------------------------------------------------------------
|
337
|
+
|
338
|
+
def set_counter(counter)
|
339
|
+
|
340
|
+
counter = reshape(counter)
|
341
|
+
set_counter_fast(counter[1])
|
342
|
+
|
343
|
+
end
|
344
|
+
|
345
|
+
#------------------------------------------------------------------------------------
|
346
|
+
# Sets the value of the array at counter with value. If type is given, cast the value
|
347
|
+
# to type before assignment
|
348
|
+
#------------------------------------------------------------------------------------
|
349
|
+
|
350
|
+
def set_at_counter(value)
|
351
|
+
|
352
|
+
begin
|
353
|
+
|
354
|
+
case @type
|
355
|
+
when "boolean"
|
356
|
+
@mdarray.nc_array.setBoolean(@nc_index, value)
|
357
|
+
when "byte"
|
358
|
+
@mdarray.nc_array.setByte(@nc_index, value)
|
359
|
+
when "char"
|
360
|
+
@mdarray.nc_array.setChar(@nc_index, value)
|
361
|
+
when "short"
|
362
|
+
@mdarray.nc_array.setShort(@nc_index, value)
|
363
|
+
when "unsigned"
|
364
|
+
@mdarray.nc_array.setUnsigned(@nc_index, value)
|
365
|
+
when "int"
|
366
|
+
@mdarray.nc_array.setInt(@nc_index, value)
|
367
|
+
when "long"
|
368
|
+
@mdarray.nc_array.setLong(@nc_index, value)
|
369
|
+
when "float"
|
370
|
+
@mdarray.nc_array.setFloat(@nc_index, value)
|
371
|
+
when "double"
|
372
|
+
@mdarray.nc_array.setDouble(@nc_index, value)
|
373
|
+
else
|
374
|
+
@mdarray.nc_array.setObject(@nc_index, value)
|
375
|
+
end
|
376
|
+
|
377
|
+
rescue ClassCastException
|
378
|
+
raise "Cannot cast element to array type"
|
379
|
+
end
|
380
|
+
|
381
|
+
end
|
382
|
+
|
383
|
+
#------------------------------------------------------------------------------------
|
384
|
+
#
|
385
|
+
#------------------------------------------------------------------------------------
|
386
|
+
|
387
|
+
def get_at_counter
|
388
|
+
|
389
|
+
case @type
|
390
|
+
when "boolean"
|
391
|
+
@mdarray.nc_array.getBoolean(@nc_index)
|
392
|
+
when "byte"
|
393
|
+
@mdarra.nc_array.getByte(@nc_index)
|
394
|
+
when "char"
|
395
|
+
@mdarray.nc_array.getChar(@nc_index)
|
396
|
+
when "double"
|
397
|
+
@mdarray.nc_array.getDouble(@nc_index)
|
398
|
+
when "float"
|
399
|
+
@mdarray.nc_array.getFloat(@nc_index)
|
400
|
+
when "int"
|
401
|
+
@mdarray.nc_array.getInt(@nc_index)
|
402
|
+
when "long"
|
403
|
+
@mdarray.nc_array.getLong(@nc_index)
|
404
|
+
when "short"
|
405
|
+
@mdarray.nc_array.getShort(@nc_index)
|
406
|
+
when "unsigned"
|
407
|
+
@mdarray.nc_array.getUnsigned(@nc_index)
|
408
|
+
else
|
409
|
+
@mdarray.nc_array.getObject(@nc_index)
|
410
|
+
end
|
411
|
+
|
412
|
+
end
|
413
|
+
|
414
|
+
#------------------------------------------------------------------------------------
|
415
|
+
#
|
416
|
+
#------------------------------------------------------------------------------------
|
417
|
+
|
418
|
+
def set_i(dim, index)
|
419
|
+
|
420
|
+
index = reshape(index)
|
421
|
+
|
422
|
+
case dim
|
423
|
+
when 0
|
424
|
+
@nc_index.set0(index)
|
425
|
+
when 1
|
426
|
+
@nc_index.set1(index)
|
427
|
+
when 2
|
428
|
+
@nc_index.set2(index)
|
429
|
+
when 3
|
430
|
+
@nc_index.set3(index)
|
431
|
+
when 4
|
432
|
+
@nc_index.set4(index)
|
433
|
+
when 5
|
434
|
+
@nc_index.set5(index)
|
435
|
+
when 6
|
436
|
+
@nc_index.set6(index)
|
437
|
+
else
|
438
|
+
raise "Maximum allowed dimension is 6. Please, use method set to set this index"
|
439
|
+
end
|
440
|
+
|
441
|
+
end
|
442
|
+
|
443
|
+
#------------------------------------------------------------------------------------
|
444
|
+
#
|
445
|
+
#------------------------------------------------------------------------------------
|
446
|
+
|
447
|
+
def set_i_fast(dim, index)
|
448
|
+
|
449
|
+
case dim
|
450
|
+
when 0
|
451
|
+
@nc_index.set0(index)
|
452
|
+
when 1
|
453
|
+
@nc_index.set1(index)
|
454
|
+
when 2
|
455
|
+
@nc_index.set2(index)
|
456
|
+
when 3
|
457
|
+
@nc_index.set3(index)
|
458
|
+
when 4
|
459
|
+
@nc_index.set4(index)
|
460
|
+
when 5
|
461
|
+
@nc_index.set5(index)
|
462
|
+
when 6
|
463
|
+
@nc_index.set6(index)
|
464
|
+
else
|
465
|
+
raise "Maximum allowed dimension is 6. Please, use method set to set this index"
|
466
|
+
end
|
467
|
+
|
468
|
+
end
|
469
|
+
|
470
|
+
#------------------------------------------------------------------------------------
|
471
|
+
# Increment the current element by 1.
|
472
|
+
#------------------------------------------------------------------------------------
|
473
|
+
|
474
|
+
def incr
|
475
|
+
@nc_index.incr()
|
476
|
+
end
|
477
|
+
|
478
|
+
#------------------------------------------------------------------------------------
|
479
|
+
# Get the length of the ith dimension.
|
480
|
+
#------------------------------------------------------------------------------------
|
481
|
+
|
482
|
+
def get_shape(dim_i)
|
483
|
+
@nc_index.getShape(dim_i)
|
484
|
+
end
|
485
|
+
|
486
|
+
#------------------------------------------------------------------------------------
|
487
|
+
# Compute total number of elements in the array.
|
488
|
+
#------------------------------------------------------------------------------------
|
489
|
+
|
490
|
+
def compute_size
|
491
|
+
@nc_index.computeSize(@mdarray.nc_array.getShape())
|
492
|
+
end
|
493
|
+
|
494
|
+
#------------------------------------------------------------------------------------
|
495
|
+
# Gets the current counter from the underlining storage. Should be the same as
|
496
|
+
# @counter
|
497
|
+
#------------------------------------------------------------------------------------
|
498
|
+
|
499
|
+
def get_current_counter
|
500
|
+
@nc_index.getCurrentCounter().to_a
|
501
|
+
end
|
502
|
+
|
503
|
+
end # Counter
|
504
|
+
|
505
|
+
|
506
|
+
#---------------------------------------------------------------------------------------
|
507
|
+
#
|
508
|
+
#---------------------------------------------------------------------------------------
|
509
|
+
|
510
|
+
class IteratorFast
|
511
|
+
|
512
|
+
attr_reader :mdarray
|
513
|
+
attr_reader :iterator
|
514
|
+
|
515
|
+
#-------------------------------------------------------------------------------------
|
516
|
+
#
|
517
|
+
#-------------------------------------------------------------------------------------
|
518
|
+
|
519
|
+
def initialize(mdarray)
|
520
|
+
@mdarray = mdarray
|
521
|
+
@iterator = mdarray.nc_array.getIndexIterator()
|
522
|
+
end
|
523
|
+
|
524
|
+
#------------------------------------------------------------------------------------
|
525
|
+
#
|
526
|
+
#------------------------------------------------------------------------------------
|
527
|
+
|
528
|
+
def has_next?
|
529
|
+
@iterator.hasNext()
|
530
|
+
end
|
531
|
+
|
532
|
+
#------------------------------------------------------------------------------------
|
533
|
+
#
|
534
|
+
#------------------------------------------------------------------------------------
|
535
|
+
|
536
|
+
def next
|
537
|
+
@iterator.next()
|
538
|
+
end
|
539
|
+
|
540
|
+
#------------------------------------------------------------------------------------
|
541
|
+
# Returns the current counter as a ruby array
|
542
|
+
#------------------------------------------------------------------------------------
|
543
|
+
|
544
|
+
def get_current_counter
|
545
|
+
@iterator.getCurrentCounter().to_a
|
546
|
+
end
|
547
|
+
|
548
|
+
#------------------------------------------------------------------------------------
|
549
|
+
#
|
550
|
+
#------------------------------------------------------------------------------------
|
551
|
+
|
552
|
+
def get_current
|
553
|
+
@iterator.getObjectCurrent()
|
554
|
+
end
|
555
|
+
|
556
|
+
alias :[] :get_current
|
557
|
+
|
558
|
+
#------------------------------------------------------------------------------------
|
559
|
+
#
|
560
|
+
#------------------------------------------------------------------------------------
|
561
|
+
|
562
|
+
def get_next
|
563
|
+
@iterator.getObjectNext()
|
564
|
+
end
|
565
|
+
|
566
|
+
#------------------------------------------------------------------------------------
|
567
|
+
#
|
568
|
+
#------------------------------------------------------------------------------------
|
569
|
+
|
570
|
+
def set_current(value)
|
571
|
+
@iterator.setObjectCurrent(value)
|
572
|
+
end
|
573
|
+
|
574
|
+
alias :[]= :set_current
|
575
|
+
|
576
|
+
#------------------------------------------------------------------------------------
|
577
|
+
#
|
578
|
+
#------------------------------------------------------------------------------------
|
579
|
+
|
580
|
+
def set_next(value)
|
581
|
+
@iterator.setObjectNext(value)
|
582
|
+
end
|
583
|
+
|
584
|
+
end # IteratorFast
|
585
|
+
|
586
|
+
#---------------------------------------------------------------------------------------
|
587
|
+
#
|
588
|
+
#---------------------------------------------------------------------------------------
|
589
|
+
|
590
|
+
class IteratorFastBoolean < IteratorFast
|
591
|
+
|
592
|
+
def get_current
|
593
|
+
@iterator.getBoolenaCurrent
|
594
|
+
end
|
595
|
+
|
596
|
+
def get_next
|
597
|
+
@iterator.getBooleanNext
|
598
|
+
end
|
599
|
+
|
600
|
+
def set_current(value)
|
601
|
+
@iterator.setBooleanCurrent(value)
|
602
|
+
end
|
603
|
+
|
604
|
+
def set_next(value)
|
605
|
+
@iterator.setBooleanNext(value)
|
606
|
+
end
|
607
|
+
|
608
|
+
end # IteratorFastBoolean
|
609
|
+
|
610
|
+
#---------------------------------------------------------------------------------------
|
611
|
+
#
|
612
|
+
#---------------------------------------------------------------------------------------
|
613
|
+
|
614
|
+
|
615
|
+
class IteratorFastByte < IteratorFast
|
616
|
+
|
617
|
+
def get_current
|
618
|
+
@iterator.getByteCurrent
|
619
|
+
end
|
620
|
+
|
621
|
+
def get_next
|
622
|
+
@iterator.getByteNext
|
623
|
+
end
|
624
|
+
|
625
|
+
def set_current(value)
|
626
|
+
@iterator.setByteCurrent(value)
|
627
|
+
end
|
628
|
+
|
629
|
+
def set_next(value)
|
630
|
+
@iterator.setByteNext(value)
|
631
|
+
end
|
632
|
+
|
633
|
+
end # IteratorFastByte
|
634
|
+
|
635
|
+
#---------------------------------------------------------------------------------------
|
636
|
+
#
|
637
|
+
#---------------------------------------------------------------------------------------
|
638
|
+
|
639
|
+
class IteratorFastChar < IteratorFast
|
640
|
+
|
641
|
+
def get_current
|
642
|
+
@iterator.getCharCurrent
|
643
|
+
end
|
644
|
+
|
645
|
+
def get_next
|
646
|
+
@iterator.getCharNext
|
647
|
+
end
|
648
|
+
|
649
|
+
def set_current(value)
|
650
|
+
@iterator.setCharCurrent(value)
|
651
|
+
end
|
652
|
+
|
653
|
+
def set_next(value)
|
654
|
+
@iterator.setCharNext(value)
|
655
|
+
end
|
656
|
+
|
657
|
+
end # IteratorFastChar
|
658
|
+
|
659
|
+
#---------------------------------------------------------------------------------------
|
660
|
+
#
|
661
|
+
#---------------------------------------------------------------------------------------
|
662
|
+
|
663
|
+
class IteratorFastShort < IteratorFast
|
664
|
+
|
665
|
+
def get_current
|
666
|
+
@iterator.getShortCurrent
|
667
|
+
end
|
668
|
+
|
669
|
+
def get_next
|
670
|
+
@iterator.getShortNext
|
671
|
+
end
|
672
|
+
|
673
|
+
def set_current(value)
|
674
|
+
@iterator.setShortCurrent(value)
|
675
|
+
end
|
676
|
+
|
677
|
+
def set_next(value)
|
678
|
+
@iterator.setShortNext(value)
|
679
|
+
end
|
680
|
+
|
681
|
+
end # IteratorFastShort
|
682
|
+
|
683
|
+
#---------------------------------------------------------------------------------------
|
684
|
+
#
|
685
|
+
#---------------------------------------------------------------------------------------
|
686
|
+
|
687
|
+
class IteratorFastInt < IteratorFast
|
688
|
+
|
689
|
+
def get_current
|
690
|
+
@iterator.getIntCurrent
|
691
|
+
end
|
692
|
+
|
693
|
+
def get_next
|
694
|
+
@iterator.getIntNext
|
695
|
+
end
|
696
|
+
|
697
|
+
def set_current(value)
|
698
|
+
@iterator.setIntCurrent(value)
|
699
|
+
end
|
700
|
+
|
701
|
+
def set_next(value)
|
702
|
+
@iterator.setIntNext(value)
|
703
|
+
end
|
704
|
+
|
705
|
+
end # IteratorFastInt
|
706
|
+
|
707
|
+
#---------------------------------------------------------------------------------------
|
708
|
+
#
|
709
|
+
#---------------------------------------------------------------------------------------
|
710
|
+
|
711
|
+
class IteratorFastLong < IteratorFast
|
712
|
+
|
713
|
+
def get_current
|
714
|
+
@iterator.getLongCurrent
|
715
|
+
end
|
716
|
+
|
717
|
+
def get_next
|
718
|
+
@iterator.getLongNext
|
719
|
+
end
|
720
|
+
|
721
|
+
def set_current(value)
|
722
|
+
@iterator.setLongCurrent(value)
|
723
|
+
end
|
724
|
+
|
725
|
+
def set_next(value)
|
726
|
+
@iterator.setLongNext(value)
|
727
|
+
end
|
728
|
+
|
729
|
+
end # IteratorFastLong
|
730
|
+
|
731
|
+
#---------------------------------------------------------------------------------------
|
732
|
+
#
|
733
|
+
#---------------------------------------------------------------------------------------
|
734
|
+
|
735
|
+
class IteratorFastFloat < IteratorFast
|
736
|
+
|
737
|
+
def get_current
|
738
|
+
@iterator.getFloatCurrent
|
739
|
+
end
|
740
|
+
|
741
|
+
def get_next
|
742
|
+
@iterator.getFloatNext
|
743
|
+
end
|
744
|
+
|
745
|
+
def set_current(value)
|
746
|
+
@iterator.setFloatCurrent(value)
|
747
|
+
end
|
748
|
+
|
749
|
+
def set_next(value)
|
750
|
+
@iterator.setFloatNext(value)
|
751
|
+
end
|
752
|
+
|
753
|
+
end # IteratorFastFloat
|
754
|
+
|
755
|
+
#---------------------------------------------------------------------------------------
|
756
|
+
#
|
757
|
+
#---------------------------------------------------------------------------------------
|
758
|
+
|
759
|
+
class IteratorFastDouble < IteratorFast
|
760
|
+
|
761
|
+
def get_current
|
762
|
+
@iterator.getDoubleCurrent
|
763
|
+
end
|
764
|
+
|
765
|
+
def get_next
|
766
|
+
@iterator.getDoubleNext
|
767
|
+
end
|
768
|
+
|
769
|
+
def set_current(value)
|
770
|
+
@iterator.setDoubleCurrent(value)
|
771
|
+
end
|
772
|
+
|
773
|
+
def set_next(value)
|
774
|
+
@iterator.setDoubleNext(value)
|
775
|
+
end
|
776
|
+
|
777
|
+
end # IteratorFastDouble
|
778
|
+
|
779
|
+
end
|